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14:37:25 Started by user devspace
14:37:25 Running as SYSTEM
14:37:25 Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-build
14:37:25 The recommended git tool is: NONE
14:37:25 No credentials specified
14:37:25  > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-build/src/.git # timeout=10
14:37:25 Fetching changes from the remote Git repository
14:37:25  > git config remote.origin.url https://github.com/snoopycrimecop/openmicroscopy.git # timeout=10
14:37:25 Fetching upstream changes from https://github.com/snoopycrimecop/openmicroscopy.git
14:37:25  > git --version # timeout=10
14:37:25  > git --version # 'git version 2.52.0'
14:37:25  > git fetch --tags --force --progress -- https://github.com/snoopycrimecop/openmicroscopy.git +refs/heads/*:refs/remotes/origin/* # timeout=30
14:37:33  > git rev-parse origin/merge_ci^{commit} # timeout=10
14:37:33 Checking out Revision 35c47a49c08c0681e36fb711f74172781c2ee13b (origin/merge_ci)
14:37:33  > git config core.sparsecheckout # timeout=10
14:37:33  > git checkout -f 35c47a49c08c0681e36fb711f74172781c2ee13b # timeout=10
14:37:36 Commit message: "Add version.properties to etc/omero.properties"
14:37:36  > git rev-list --no-walk f5ad26da2089c67dcc6f00da4246d2502361d3df # timeout=10
14:37:36 Cleaning workspace
14:37:36  > git rev-parse --verify HEAD # timeout=10
14:37:36 Resetting working tree
14:37:36  > git reset --hard # timeout=10
14:37:36  > git clean -fdx # timeout=10
14:38:31 Copied 6 artifacts from "OMERO-python-superbuild-build" build number 85
14:38:32 [OMERO-build] $ /bin/bash -xe /tmp/jenkins1950008793001601220.sh
14:38:32 + mv omero-scripts/dist/omero_scripts-5.10.1.dev0.tar.gz .
14:38:32 + cd src
14:38:32 + export OMERO_BRANCH=merge_ci
14:38:32 + OMERO_BRANCH=merge_ci
14:38:32 + OMERO_VEN=/home/omero/workspace/OMERO-build/omero-virtualenv
14:38:32 + rm -rf /home/omero/workspace/OMERO-build/omero-virtualenv
14:39:13 + source /home/omero/settings.env
14:39:13 ++ OMERO_DB_HOST=pg
14:39:13 ++ OMERO_DB_USER=postgres
14:39:13 ++ OMERO_DB_PASS=
14:39:13 ++ OMERO_ROOT_PASS=omero
14:39:13 ++ OMERO_DATA_DIR=/OMERO
14:39:13 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
14:39:13 + python3.11 -m venv /home/omero/workspace/OMERO-build/omero-virtualenv
14:39:33 + /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl
14:39:34 Collecting zeroc-ice==3.6.5
14:39:34   Downloading https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl (37.3 MB)
14:39:37      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 37.3/37.3 MB 12.4 MB/s eta 0:00:00
14:39:37 Installing collected packages: zeroc-ice
14:39:41 Successfully installed zeroc-ice-3.6.5
14:39:41 
14:39:41 [notice] A new release of pip available: 22.3.1 -> 26.2.1
14:39:41 [notice] To update, run: python3.11 -m pip install --upgrade pip
14:39:41 + /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install -U 'setuptools<66' omero-py
14:39:42 Requirement already satisfied: setuptools<66 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages (65.5.1)
14:39:42 Collecting setuptools<66
14:39:42   Using cached setuptools-65.7.0-py3-none-any.whl (1.2 MB)
14:39:43 Collecting omero-py
14:39:43   Using cached omero_py-5.23.0-py3-none-any.whl (2.8 MB)
14:39:43 Collecting appdirs
14:39:43   Using cached appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB)
14:39:43 Collecting future
14:39:43   Using cached future-1.0.0-py3-none-any.whl (491 kB)
14:39:44 Collecting numpy<3,>=2
14:39:44   Using cached numpy-2.4.6-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (16.9 MB)
14:39:45 Collecting Pillow>=10.0.0
14:39:45   Using cached pillow-12.3.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (6.9 MB)
14:39:45 Collecting PyYAML
14:39:45   Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB)
14:39:45 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages (from omero-py) (3.6.5)
14:39:45 Collecting requests
14:39:45   Using cached requests-2.34.2-py3-none-any.whl (73 kB)
14:39:45 Collecting portalocker
14:39:45   Using cached portalocker-4.4.0-py3-none-any.whl (129 kB)
14:39:46 Collecting charset_normalizer<4,>=2
14:39:46   Downloading charset_normalizer-3.5.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (269 kB)
14:39:46      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 270.0/270.0 kB 2.2 MB/s eta 0:00:00
14:39:46 Collecting idna<4,>=2.5
14:39:47   Using cached idna-3.20-py3-none-any.whl (69 kB)
14:39:47 Collecting urllib3<3,>=1.26
14:39:47   Using cached urllib3-2.8.0-py3-none-any.whl (135 kB)
14:39:47 Collecting certifi>=2023.5.7
14:39:47   Using cached certifi-2026.7.22-py3-none-any.whl (136 kB)
14:39:47 Installing collected packages: appdirs, urllib3, setuptools, PyYAML, portalocker, Pillow, numpy, idna, future, charset_normalizer, certifi, requests, omero-py
14:39:48   Attempting uninstall: setuptools
14:39:48     Found existing installation: setuptools 65.5.1
14:39:49     Uninstalling setuptools-65.5.1:
14:39:49       Successfully uninstalled setuptools-65.5.1
14:40:40 Successfully installed Pillow-12.3.0 PyYAML-6.0.3 appdirs-1.4.4 certifi-2026.7.22 charset_normalizer-3.5.2 future-1.0.0 idna-3.20 numpy-2.4.6 omero-py-5.23.0 portalocker-4.4.0 requests-2.34.2 setuptools-65.7.0 urllib3-2.8.0
14:40:40 
14:40:40 [notice] A new release of pip available: 22.3.1 -> 26.2.1
14:40:40 [notice] To update, run: python3.11 -m pip install --upgrade pip
14:40:41 + source /home/omero/workspace/OMERO-build/omero-virtualenv/bin/activate
14:40:41 ++ deactivate nondestructive
14:40:41 ++ '[' -n '' ']'
14:40:41 ++ '[' -n '' ']'
14:40:41 ++ hash -r
14:40:41 ++ '[' -n '' ']'
14:40:41 ++ unset VIRTUAL_ENV
14:40:41 ++ unset VIRTUAL_ENV_PROMPT
14:40:41 ++ '[' '!' nondestructive = nondestructive ']'
14:40:41 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-build/omero-virtualenv
14:40:41 ++ export VIRTUAL_ENV
14:40:41 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
14:40:41 ++ PATH=/home/omero/workspace/OMERO-build/omero-virtualenv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
14:40:41 ++ export PATH
14:40:41 ++ '[' -n '' ']'
14:40:41 ++ '[' -z '' ']'
14:40:41 ++ _OLD_VIRTUAL_PS1=
14:40:41 ++ PS1='(omero-virtualenv) '
14:40:41 ++ export PS1
14:40:41 ++ VIRTUAL_ENV_PROMPT='(omero-virtualenv) '
14:40:41 ++ export VIRTUAL_ENV_PROMPT
14:40:41 ++ hash -r
14:40:41 + source docs/hudson/OMERO.sh
14:40:41 ++ set -e
14:40:41 ++ set -u
14:40:41 ++ set -x
14:40:41 ++ source docs/hudson/functions.sh
14:40:41 ++ echo Building merge_ci
14:40:41 Building merge_ci
14:40:41 ++ python3 ./build.py build-dev release-all
14:40:41 Buildfile: /home/omero/workspace/OMERO-build/src/build.xml
14:40:42 
14:40:42 check-ivy:
14:40:42 Creating /home/omero/workspace/OMERO-build/src/etc/local.properties
14:40:42 Created dir: /home/omero/workspace/OMERO-build/src/target
14:40:43 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
14:40:43 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
14:40:46 
14:40:46 build-scons:
14:40:46 Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
14:40:47 No sub-builds to iterate on
14:40:48 Entering /home/omero/workspace/OMERO-build/src/components/tools...
14:40:48 
14:40:48 buildlist:
14:40:48 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
14:40:48 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
14:40:49 
14:40:49 clean:
14:40:49 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
14:40:50 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
14:40:50 
14:40:50 python-clean:
14:40:50 WARNING: '' not a valid package name; please use only .-separated package names in setup.py
14:40:50 /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages/setuptools/dist.py:543: UserWarning: The version specified ('5.6.3-688-35c47a49c0-ice36-b94') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
14:40:50   warnings.warn(
14:40:50 running clean
14:40:50 Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb/omero_version.py
14:40:51 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
14:40:51 
14:40:51 python-clean:
14:40:51 WARNING: '' not a valid package name; please use only .-separated package names in setup.py
14:40:51 /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages/setuptools/dist.py:543: UserWarning: The version specified ('5.6.3-688-35c47a49c0-ice36-b94') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
14:40:51   warnings.warn(
14:40:51 running clean
14:40:52 Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS/omero_version.py
14:40:52 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
14:40:53 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
14:40:53 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
14:40:53 
14:40:53 python-clean:
14:40:53 WARNING: '' not a valid package name; please use only .-separated package names in setup.py
14:40:53 /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages/setuptools/dist.py:543: UserWarning: The version specified ('5.6.3-688-35c47a49c0-ice36-b94') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
14:40:53   warnings.warn(
14:40:53 running clean
14:40:53 Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy/omero_version.py
14:40:53 Deleting directory /home/omero/workspace/OMERO-build/src/target
14:40:54 
14:40:54 build-scons:
14:40:54 Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
14:40:56 
14:40:56 build:
14:40:56 No sub-builds to iterate on
14:40:56 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
14:40:57 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
14:40:57 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
14:40:58 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
14:40:58 
14:40:58 tools-init:
14:40:58 no-op
14:40:59 
14:40:59 retrieve:
14:40:59 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
14:40:59 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
14:42:43 
14:42:43 prepare:
14:42:43 Preparing: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs
14:42:43 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/.done
14:42:43 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/src
14:42:43 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
14:42:43 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
14:42:43 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
14:42:43 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/reports
14:42:43 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
14:42:43 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
14:42:44 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
14:42:44 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
14:42:44 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
14:42:44 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
14:42:44 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
14:42:44 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
14:42:44 
14:42:44 pre-compile:
14:42:44 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/glacier2.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
14:42:45 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ice.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
14:42:53 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icegrid.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
14:42:58 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icestorm.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
14:42:59 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ome-xml.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
14:43:01 
14:43:01 compile:
14:43:01 no-op
14:43:01 
14:43:01 package:
14:43:01 Building jar: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/omero_client.jar
14:43:06 
14:43:06 install:
14:43:06 :: delivering :: omero#omero_client;working@5ffef7c1fdfa :: 5.6.3-688-35c47a49c0-ice36-b94 :: integration :: Wed Sep 30 14:40:57 UTC 2026
14:43:06 	delivering ivy file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/ivy.xml
14:43:06 :: publishing :: omero#omero_client
14:43:06 	published omero_client to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-688-35c47a49c0-ice36-b94/omero_client-5.6.3-688-35c47a49c0-ice36-b94.jar
14:43:06 	published ivy to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-688-35c47a49c0-ice36-b94/omero_client-5.6.3-688-35c47a49c0-ice36-b94.xml
14:43:07 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
14:43:07 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
14:43:07 
14:43:07 retrieve:
14:43:07 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
14:43:07 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
14:43:08 Entering /home/omero/workspace/OMERO-build/src/components/tools...
14:43:08 
14:43:08 dist:
14:43:08 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/service-classes/META-INF
14:43:08 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/lib/server
14:43:08 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
14:43:08 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts/omero_scripts-5.10.1.dev0.tar.gz into /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
14:43:09 Copying 29 files to /home/omero/workspace/OMERO-build/src/components/tools/target/lib/scripts
14:43:09 Copying 29 files to /home/omero/workspace/OMERO-build/src/dist
14:43:10 Copied 9 empty directories to 1 empty directory under /home/omero/workspace/OMERO-build/src/dist
14:43:11 Entering /home/omero/workspace/OMERO-build/src/components/tests...
14:43:11 Entering /home/omero/workspace/OMERO-build/src/components/tests/ui...
14:43:13 
14:43:13 copy-licenses:
14:43:13 Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
14:43:13 Created dir: /home/omero/workspace/OMERO-build/src/dist/share
14:43:13 Copying 44 files to /home/omero/workspace/OMERO-build/src/dist/share
14:43:13 
14:43:13 copy-history:
14:43:13 Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
14:43:13 
14:43:13 copy-etc:
14:43:13 Copying 28 files to /home/omero/workspace/OMERO-build/src/dist/etc
14:43:14 Copying 1 file to /home/omero/workspace/OMERO-build/src/dist/etc/templates
14:43:14 
14:43:14 copy-sql:
14:43:14 Copying 60 files to /home/omero/workspace/OMERO-build/src/dist
14:43:54 
14:43:54 copy-server:
14:43:54 	conflict on /home/omero/workspace/OMERO-build/src/dist/lib/server/janino.jar in [server]: 3.1.9 won
14:43:54 	conflict on /home/omero/workspace/OMERO-build/src/dist/lib/server/annotations.jar in [server]: 2.34.6 won
14:44:02 
14:44:02 copy-client:
14:44:02 Created dir: /home/omero/workspace/OMERO-build/src/dist/lib/client
14:44:09 	conflict on /home/omero/workspace/OMERO-build/src/dist/lib/client/janino.jar in [client]: 3.1.9 won
14:44:09 	conflict on /home/omero/workspace/OMERO-build/src/dist/lib/client/annotations.jar in [client]: 2.34.6 won
14:44:15 
14:44:15 update-version:
14:44:15 Copying 1 file to /home/omero/workspace/OMERO-build/src/dist/etc
14:44:15 
14:44:15 create-workdirs:
14:44:15 Created dir: /home/omero/workspace/OMERO-build/src/dist/etc/grid
14:44:15 Created dir: /home/omero/workspace/OMERO-build/src/dist/var
14:44:15 Created dir: /home/omero/workspace/OMERO-build/src/dist/var/tmp
14:44:15 
14:44:15 copy-luts:
14:44:15 Created dir: /home/omero/workspace/OMERO-build/src/dist/lib/scripts/luts
14:44:15 Copying 47 files to /home/omero/workspace/OMERO-build/src/dist/lib/scripts/luts
14:44:15 
14:44:15 test-compile:
14:44:15 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
14:44:16 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
14:44:17 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
14:44:17 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
14:44:17 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
14:44:18 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
14:44:18 Entering /home/omero/workspace/OMERO-build/src/components/tests/ui...
14:44:19 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
14:44:19 
14:44:19 testng-init:
14:44:19 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
14:44:19 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
14:44:32 14:44:32,480 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.16
14:44:32 14:44:32,483 |-INFO in ch.qos.logback.classic.util.ContextInitializer@74d294f4 - No custom configurators were discovered as a service.
14:44:32 14:44:32,483 |-INFO in ch.qos.logback.classic.util.ContextInitializer@74d294f4 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
14:44:32 14:44:32,487 |-INFO in ch.qos.logback.classic.util.ContextInitializer@74d294f4 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
14:44:32 14:44:32,491 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
14:44:32 14:44:32,494 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
14:44:32 14:44:32,495 |-INFO in ch.qos.logback.classic.util.ContextInitializer@74d294f4 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 8 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
14:44:32 14:44:32,495 |-INFO in ch.qos.logback.classic.util.ContextInitializer@74d294f4 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
14:44:32 14:44:32,497 |-INFO in ch.qos.logback.classic.util.ContextInitializer@74d294f4 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
14:44:32 14:44:32,500 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
14:44:32 14:44:32,501 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes/logback.xml]
14:44:32 14:44:32,503 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@74ea5db2 - Resource [logback.xml] occurs multiple times on the classpath.
14:44:32 14:44:32,503 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@74ea5db2 - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes/logback.xml]
14:44:32 14:44:32,503 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@74ea5db2 - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources/logback.xml]
14:44:32 14:44:32,734 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stderr]
14:44:32 14:44:32,734 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
14:44:32 14:44:32,756 |-INFO in ch.qos.logback.core.model.processor.ImplicitModelHandler - Assuming default type [ch.qos.logback.classic.encoder.PatternLayoutEncoder] for [encoder] property
14:44:32 14:44:32,758 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@35f69a32 - As of version 1.2.0 "immediateFlush" property should be set within the enclosing Appender.
14:44:32 14:44:32,758 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@35f69a32 - Please move "immediateFlush" property into the enclosing appender.
14:44:32 14:44:32,829 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@35f69a32 - Setting the "immediateFlush" property of the enclosing appender to true
14:44:32 14:44:32,830 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [velocity] to ERROR
14:44:32 14:44:32,830 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [org] to ERROR
14:44:32 14:44:32,830 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [ome] to ERROR
14:44:32 14:44:32,830 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci] to ERROR
14:44:32 14:44:32,830 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to WARN
14:44:32 14:44:32,830 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stderr] to Logger[ROOT]
14:44:32 14:44:32,832 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@3c9be087 - End of configuration.
14:44:32 14:44:32,834 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5c0ea6d4 - Registering current configuration as safe fallback point
14:44:32 14:44:32,834 |-INFO in ch.qos.logback.classic.util.ContextInitializer@74d294f4 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 337 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
14:44:32 
14:44:32 lifecycle.test-compile:
14:44:32 Copying 3 files to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
14:44:32 Compiling 86 source files to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
14:44:33 warning: [options] bootstrap class path not set in conjunction with -source 8
14:44:33 warning: [options] source value 8 is obsolete and will be removed in a future release
14:44:33 warning: [options] target value 8 is obsolete and will be removed in a future release
14:44:33 warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
14:44:36 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/AbstractServerTest.java:61: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
14:44:36 import omero.grid.RawAccessRequest;
14:44:36                  ^
14:44:36 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:32: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
14:44:36 import omero.grid.RawAccessRequest;
14:44:36                  ^
14:44:37 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:53: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
14:44:37 import omero.grid.RawAccessRequest;
14:44:37                  ^
14:44:37 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:31: warning: [deprecation] ImportJob in omero.model has been deprecated
14:44:37 import omero.model.ImportJob;
14:44:37                   ^
14:44:37 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:32: warning: [deprecation] ImportJobI in omero.model has been deprecated
14:44:37 import omero.model.ImportJobI;
14:44:37                   ^
14:44:38 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ModelMockFactory.java:1207: warning: [deprecation] newInstance() in Class has been deprecated
14:44:38         IObject link = (IObject) linkClass.newInstance();
14:44:38                                           ^
14:44:38   where T is a type-variable:
14:44:38     T extends Object declared in class Class
14:44:38 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/CreatePojosFixture2.java:269: warning: [deprecation] newInstance() in Class has been deprecated
14:44:38         T copy = (T) obj.getClass().newInstance();
14:44:38                                    ^
14:44:38   where T is a type-variable:
14:44:38     T extends Object declared in class Class
14:44:38 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
14:44:38         RawAccessRequest raw = new RawAccessRequest();
14:44:38         ^
14:44:38 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
14:44:38         RawAccessRequest raw = new RawAccessRequest();
14:44:38                                    ^
14:44:38 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:419: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
14:44:38         raw.repoUuid = legacy.root().getHash().getValue();
14:44:38            ^
14:44:38 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:420: warning: [deprecation] command in RawAccessRequest has been deprecated
14:44:38         raw.command = "rm";
14:44:38            ^
14:44:38 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:421: warning: [deprecation] args in RawAccessRequest has been deprecated
14:44:38         raw.args = Arrays.asList(path);
14:44:38            ^
14:44:38 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DiskUsageTest.java:156: warning: [deprecation] newInstance() in Class has been deprecated
14:44:38         final IObject link = linkClass.newInstance();
14:44:38                                       ^
14:44:38   where T is a type-variable:
14:44:38     T extends Object declared in class Class
14:44:39 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DuplicationTest.java:1332: warning: [deprecation] newInstance() in Class has been deprecated
14:44:39             originalLink.setChild(annotationClass.newInstance());
14:44:39                                                  ^
14:44:39   where T is a type-variable:
14:44:39     T extends Object declared in class Class
14:44:39 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ImporterTest.java:1088: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
14:44:39         RoiResult r = svc.findByImage(id, new RoiOptions());
14:44:39                          ^
14:44:39 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
14:44:39         final RawAccessRequest request = new RawAccessRequest();
14:44:39               ^
14:44:39 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
14:44:39         final RawAccessRequest request = new RawAccessRequest();
14:44:39                                              ^
14:44:39 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:901: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
14:44:39         request.repoUuid = repo.root().getHash().getValue();
14:44:39                ^
14:44:39 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:902: warning: [deprecation] command in RawAccessRequest has been deprecated
14:44:39         request.command = "exists";
14:44:39                ^
14:44:39 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:903: warning: [deprecation] args in RawAccessRequest has been deprecated
14:44:39         request.args = Collections.singletonList(dirPath);
14:44:39                ^
14:44:39 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
14:44:39         final RawAccessRequest request = new RawAccessRequest();
14:44:39               ^
14:44:39 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
14:44:39         final RawAccessRequest request = new RawAccessRequest();
14:44:39                                              ^
14:44:39 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:940: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
14:44:39         request.repoUuid = repo.root().getHash().getValue();
14:44:39                ^
14:44:39 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:941: warning: [deprecation] command in RawAccessRequest has been deprecated
14:44:39         request.command = "exists";
14:44:39                ^
14:44:39 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:942: warning: [deprecation] args in RawAccessRequest has been deprecated
14:44:39         request.args = Collections.singletonList(dirName);
14:44:39                ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ModelMockFactoryTest.java:60: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
14:44:40             RoiResult result = roiSvc.findByImage(imageId, new RoiOptions());
14:44:40                                      ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJob in omero.model has been deprecated
14:44:40         final ImportJob importJob = new ImportJobI();
14:44:40               ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJobI in omero.model has been deprecated
14:44:40         final ImportJob importJob = new ImportJobI();
14:44:40                                         ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:266: warning: [deprecation] setImageName(RString) in ImportJob has been deprecated
14:44:40         importJob.setImageName(omero.rtypes.rstring(name));
14:44:40                  ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:268: warning: [deprecation] setImageDescription(RString) in ImportJob has been deprecated
14:44:40         importJob.setImageDescription(omero.rtypes.rstring(desc));
14:44:40                  ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
14:44:40         ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
14:44:40         ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
14:44:40         ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
14:44:40                           ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:274: warning: [deprecation] getImageName() in ImportJob has been deprecated
14:44:40         final String savedName = sent.getImageName().getValue().toString();
14:44:40                                      ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:275: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
14:44:40         final String savedDesc = sent.getImageDescription().getValue().toString();
14:44:40                                      ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
14:44:40         final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
14:44:40               ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
14:44:40         final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
14:44:40                                               ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:278: warning: [deprecation] getImageName() in ImportJob has been deprecated
14:44:40         final String retrievedName = retrievedImportJob.getImageName().getValue().toString();
14:44:40                                                        ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:279: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
14:44:40         final String retrievedDesc = retrievedImportJob.getImageDescription().getValue().toString();
14:44:40                                                        ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:141: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
14:44:40         RoiResult r = svc.findByImage(image.getId().getValue(),
14:44:40                          ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:190: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
14:44:40         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
14:44:40                                 ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:220: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
14:44:40         l = svc.getRoiMeasurements(image.getId().getValue(), options);
14:44:40                ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:241: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
14:44:40         l = svc.getRoiMeasurements(image.getId().getValue(), options);
14:44:40                ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:313: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
14:44:40         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
14:44:40                                 ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:320: warning: [deprecation] getMeasuredRoisMap(long,List<Long>,RoiOptions) in IRoiPrx has been deprecated
14:44:40         Map<Long, RoiResult> values = svc.getMeasuredRoisMap(image.getId()
14:44:40                                          ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:386: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
14:44:40         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
14:44:40                                 ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:390: warning: [deprecation] getTable(long) in IRoiPrx has been deprecated
14:44:40         table = svc.getTable(f.getId().getValue());
14:44:40                    ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:412: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
14:44:40         RoiResult r = svc.findByImage(image.getId().getValue(),
14:44:40                          ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:426: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
14:44:40         r = svc.findByRoi(r1.getId().getValue(), new RoiOptions());
14:44:40                ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:437: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
14:44:40         r = svc.findByRoi(r2.getId().getValue(), new RoiOptions());
14:44:40                ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:448: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
14:44:40         r = svc.findByPlane(image.getId().getValue(), 1, 0, new RoiOptions());
14:44:40                ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:459: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
14:44:40         r = svc.findByPlane(image.getId().getValue(), 1, 1, new RoiOptions());
14:44:40                ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
14:44:40             null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
14:44:40                   ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
14:44:40             null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
14:44:40                                   ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
14:44:40             new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
14:44:40                                    ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
14:44:40             new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
14:44:40                                                    ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [removal] Long(long) in Long has been deprecated and marked for removal
14:44:40             Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
14:44:40                                       ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
14:44:40             Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
14:44:40                                                        ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
14:44:40             Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
14:44:40                                                                        ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
14:44:40         inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
14:44:40                                        ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
14:44:40         inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
14:44:40                                                         ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
14:44:40         inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
14:44:40                                        ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
14:44:40         inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
14:44:40                                                        ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
14:44:40         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
14:44:40                                        ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
14:44:40         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
14:44:40                                                        ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
14:44:40         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
14:44:40                                        ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
14:44:40         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
14:44:40                                                        ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
14:44:40         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
14:44:40                                        ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
14:44:40         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
14:44:40                                                        ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:755: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
14:44:40                 svc.getShapeStatsRestricted(
14:44:40                    ^
14:44:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:764: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
14:44:40         final ShapeStats [] stats = svc.getShapeStatsRestricted(ids, 0, 0, new int[] {0});
14:44:40                                        ^
14:44:41 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveTest.java:1030: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
14:44:41         projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
14:44:41                                      ^
14:44:41 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:478: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
14:44:41         request.typesToIgnore = Collections.singletonList("TagAnnotation");
14:44:41                ^
14:44:41 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:495: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
14:44:41         request.typesToIgnore = Collections.singletonList("IAnnotationLink");
14:44:41                ^
14:44:41 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:501: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
14:44:41         request.typesToIgnore = Collections.singletonList("Annotation");
14:44:41                ^
14:44:41 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:547: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
14:44:41                     request.typesToIgnore = Collections.singletonList("Annotation");
14:44:41                            ^
14:44:41 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/HierarchyDeleteTest.java:537: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
14:44:41         projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
14:44:41                                      ^
14:44:41 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:37: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
14:44:41         p2.setRelatedTo(p1);
14:44:41           ^
14:44:41 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:39: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
14:44:41         Assert.assertEquals(p1.getId(), p2.getRelatedTo().getId());
14:44:41                                           ^
14:44:41 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:66: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
14:44:41         pixels1.setRelatedTo(pixels2);
14:44:41                ^
14:44:41 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:68: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
14:44:41         Pixels pixels = pixels1.getRelatedTo();
14:44:41                                ^
14:44:41 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:88: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
14:44:41         Assert.assertNull(pixels1.getRelatedTo());
14:44:41                                  ^
14:44:41 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:106: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
14:44:41         pixels1.setRelatedTo(pixels2);
14:44:41                ^
14:44:41 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:108: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
14:44:41         Pixels pixels = pixels1.getRelatedTo();
14:44:41                                ^
14:44:41 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:128: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
14:44:41         Assert.assertNull(pixels1.getRelatedTo());
14:44:41                                  ^
14:44:41 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:113: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
14:44:41         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
14:44:41                                 ^
14:44:41 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:147: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
14:44:41         l = svc.getRoiMeasurements(image.getId().getValue(), options);
14:44:41                ^
14:44:41 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:186: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
14:44:41         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
14:44:41                                 ^
14:44:41 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:221: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
14:44:41         l = svc.getRoiMeasurements(image.getId().getValue(), options);
14:44:41                ^
14:44:41 Note: Some input files use unchecked or unsafe operations.
14:44:41 Note: Recompile with -Xlint:unchecked for details.
14:44:41 92 warnings
14:44:42 Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/_omero_build_1021732197.tmp
14:44:42 Building jar: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/OmeroJava-test.jar
14:44:42 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
14:44:42 :: delivering :: omero#OmeroJava-test;working@5ffef7c1fdfa :: 5.6.3-688-35c47a49c0-ice36-b94 :: integration :: Wed Sep 30 14:44:18 UTC 2026
14:44:42 	delivering ivy file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/OmeroJava-test.xml
14:44:42 :: publishing :: omero#OmeroJava-test
14:44:42 	published OmeroJava-test to /home/omero/workspace/OMERO-build/src/target/test-repository/OmeroJava-test-5.6.3-688-35c47a49c0-ice36-b94.jar
14:44:42 	published ivy to /home/omero/workspace/OMERO-build/src/target/test-repository/OmeroJava-test-5.6.3-688-35c47a49c0-ice36-b94.xml
14:44:42 
14:44:42 build-eclipse:
14:44:42 No sub-builds to iterate on
14:44:43 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
14:44:43 
14:44:43 retrieve:
14:44:43 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
14:44:43 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
14:44:49 
14:44:49 prepare:
14:44:49 Preparing: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs
14:44:53 
14:44:53 release-clients:
14:44:53 Building zip: /home/omero/workspace/OMERO-build/src/target/OMERO.java-5.6.3-688-35c47a49c0-ice36-b94.zip
14:45:01 
14:45:01 release-zip:
14:45:01 Building zip: /home/omero/workspace/OMERO-build/src/target/OMERO.server-5.6.3-688-35c47a49c0-ice36-b94.zip
14:45:15 
14:45:15 BUILD SUCCESSFUL
14:45:15 Total time: 4 minutes 33 seconds
14:45:15 ++ '[' -d .git ']'
14:45:15 ++ python3 ./build.py release-src
14:45:15 Buildfile: /home/omero/workspace/OMERO-build/src/build.xml
14:45:17 
14:45:17 release-src-git:
14:45:17 Releasing openmicroscopy-5.6.3-688-35c47a49c0-ice36-b94
14:45:19   - creating /home/omero/workspace/OMERO-build/src/target/openmicroscopy-5.6.3-688-35c47a49c0-ice36-b94.zip
14:45:19   - repacking /home/omero/workspace/OMERO-build/src/target/openmicroscopy-5.6.3-688-35c47a49c0-ice36-b94-base.zip
14:45:20 
14:45:20 BUILD SUCCESSFUL
14:45:20 Total time: 5 seconds
14:45:20 ++ echo BUILD_NUMBER=94
14:45:20 ++ echo OMERO_BRANCH=merge_ci
14:45:20 ++ git_info
14:45:20 +++ git rev-parse HEAD
14:45:20 ++ HEAD=35c47a49c08c0681e36fb711f74172781c2ee13b
14:45:20 ++ git log --max-count=1 35c47a49c08c0681e36fb711f74172781c2ee13b
14:45:20 ++ env
14:45:20 ++ sort
14:45:21 Archiving artifacts
14:45:39 Finished: SUCCESS