Skipping 114 KB..
Full LogTestTestTestTestTestTestTestTestTestTestTestTestTest
2024-12-06 00:44:58,279 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
2024-12-06 00:44:58,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None
2024-12-06 00:44:58,757 [ scc.repo] DEBUG # ... Include label: dependencies
2024-12-06 00:44:59,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None
2024-12-06 00:44:59,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-06 00:45:00,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-06 00:45:00,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d HTTP/1.1" 200 None
2024-12-06 00:45:01,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2
2024-12-06 00:45:01,232 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
2024-12-06 00:45:01,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None
2024-12-06 00:45:02,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None
2024-12-06 00:45:02,210 [ scc.repo] DEBUG # ... Include label: dependencies
2024-12-06 00:45:02,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None
2024-12-06 00:45:03,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-06 00:45:03,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-06 00:45:04,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5 HTTP/1.1" 200 None
2024-12-06 00:45:04,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2
2024-12-06 00:45:04,874 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
2024-12-06 00:45:05,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None
2024-12-06 00:45:05,343 [ scc.repo] DEBUG # ... Include label: dependencies
2024-12-06 00:45:05,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None
2024-12-06 00:45:06,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-06 00:45:06,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-06 00:45:07,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b HTTP/1.1" 200 None
2024-12-06 00:45:07,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2
2024-12-06 00:45:07,832 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents'
2024-12-06 00:45:08,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None
2024-12-06 00:45:08,290 [ scc.repo] DEBUG # ... Include label: dependencies
2024-12-06 00:45:08,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None
2024-12-06 00:45:09,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-06 00:45:09,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-06 00:45:10,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e HTTP/1.1" 200 None
2024-12-06 00:45:10,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2
2024-12-06 00:45:10,826 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
2024-12-06 00:45:10,826 [ scc.repo] DEBUG ## Branches found:
2024-12-06 00:45:10,826 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2024-12-06 00:45:10,827 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:45:10,827 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:45:10,833 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-06 00:45:10,839 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-06 00:45:10,839 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-06 00:45:10,847 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-06 00:45:10,856 [ scc.git] DEBUG Already up to date.
2024-12-06 00:45:10,856 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head'
2024-12-06 00:45:11,163 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-12-06 00:45:11,163 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD
2024-12-06 00:45:11,168 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head'
2024-12-06 00:45:11,462 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-12-06 00:45:11,463 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD
2024-12-06 00:45:11,468 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head'
2024-12-06 00:45:11,764 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-12-06 00:45:11,764 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD
2024-12-06 00:45:11,770 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head'
2024-12-06 00:45:12,076 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-12-06 00:45:12,076 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD
2024-12-06 00:45:12,082 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head'
2024-12-06 00:45:12,414 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-12-06 00:45:12,415 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD
2024-12-06 00:45:12,420 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head'
2024-12-06 00:45:12,707 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-12-06 00:45:12,708 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD
2024-12-06 00:45:12,713 [ scc.git] DEBUG ## Unique users: []
2024-12-06 00:45:12,714 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:45:12,714 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:45:12,720 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e'
2024-12-06 00:45:12,787 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:45:12,793 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e'
2024-12-06 00:45:12,858 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-06 00:45:12,863 [ scc.git] DEBUG package-lock.json | 12 ++++++------
2024-12-06 00:45:12,863 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-)
2024-12-06 00:45:13,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:45:13,003 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b'
2024-12-06 00:45:13,072 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:45:13,078 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b'
2024-12-06 00:45:13,496 [ scc.git] DEBUG Auto-merging package-lock.json
2024-12-06 00:45:13,497 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-06 00:45:13,503 [ scc.git] DEBUG package-lock.json | 625 +++---------------------------------------------------
2024-12-06 00:45:13,503 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-)
2024-12-06 00:45:13,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:45:13,669 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2024-12-06 00:45:13,677 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:45:13,682 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2024-12-06 00:45:13,814 [ scc.git] DEBUG Auto-merging package-lock.json
2024-12-06 00:45:13,815 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2024-12-06 00:45:13,815 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-06 00:45:13,815 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-06 00:45:13,822 [ scc.git] DEBUG Calling 'git reset --hard 424e5d0427cce65a7e824489718880c6cb45898d'
2024-12-06 00:45:13,830 [ scc.git] DEBUG HEAD is now at 424e5d0 merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents)
2024-12-06 00:45:14,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:45:14,067 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5'
2024-12-06 00:45:14,074 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2024-12-06 00:45:14,082 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#270](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
--conflicts
2024-12-06 00:45:14,088 [ scc.config] DEBUG Found github.token
2024-12-06 00:45:14,088 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts.
2024-12-06 00:45:14,088 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d'
2024-12-06 00:45:14,097 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:45:14,103 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d'
2024-12-06 00:45:14,184 [ scc.git] DEBUG Auto-merging package-lock.json
2024-12-06 00:45:14,185 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-06 00:45:14,190 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++-----
2024-12-06 00:45:14,190 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-)
2024-12-06 00:45:14,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:45:14,463 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c'
2024-12-06 00:45:14,523 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:45:14,530 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c'
2024-12-06 00:45:14,670 [ scc.git] DEBUG Auto-merging package-lock.json
2024-12-06 00:45:14,671 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-06 00:45:14,677 [ scc.git] DEBUG package-lock.json | 6 +++---
2024-12-06 00:45:14,677 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-)
2024-12-06 00:45:14,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:45:14,884 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2024-12-06 00:45:14,892 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:45:14,898 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2024-12-06 00:45:14,934 [ scc.git] DEBUG Auto-merging package-lock.json
2024-12-06 00:45:14,934 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json
2024-12-06 00:45:14,934 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-06 00:45:14,935 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-06 00:45:14,941 [ scc.git] DEBUG Calling 'git reset --hard 2a1f1ad8c4db2b9850604e270e6c6d74f0541315'
2024-12-06 00:45:14,948 [ scc.git] DEBUG HEAD is now at 2a1f1ad merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6)
2024-12-06 00:45:15,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:45:15,266 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d'
2024-12-06 00:45:15,273 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd'
2024-12-06 00:45:15,279 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
Conflicting PR. Removed from build [OMERO-plugins-push#270](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/consoleText) for more details.
Possible conflicts:
- PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- package-lock.json
- PR #114 dependabot[bot] 'Bump tar and fsevents'
- package-lock.json
- PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- package-lock.json
- PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- package-lock.json
- PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
- package-lock.json
--conflicts
2024-12-06 00:45:15,284 [ scc.config] DEBUG Found github.token
2024-12-06 00:45:15,284 [ scc.git] DEBUG Adding comment to issue #118.
2024-12-06 00:45:16,098 [urllib3.conn] DEBUG https://api.github.com:443 "POST /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 201 2394
2024-12-06 00:45:16,100 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-06 00:45:16,141 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:45:16,141 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:45:16,147 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-06 00:45:16,185 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-06 00:45:16,193 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf5828df40> has no local changes
2024-12-06 00:45:16,193 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- PR 114 dependabot[bot] 'Bump tar and fsevents'
- PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
Conflicting PRs (not included):
- PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)'
2024-12-06 00:45:16,202 [ scc.git] DEBUG [detached HEAD 56583b7] merge master -Dorg -Ssuccess-only
2024-12-06 00:45:16,202 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-06 00:45:16,202 [ scc.repo] DEBUG ## PRs found:
2024-12-06 00:45:16,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None
2024-12-06 00:45:17,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None
2024-12-06 00:45:17,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None
2024-12-06 00:45:18,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None
2024-12-06 00:45:18,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None
2024-12-06 00:45:19,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2024-12-06 00:45:19,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-06 00:45:20,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-06 00:45:20,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2024-12-06 00:45:21,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2
2024-12-06 00:45:21,130 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip'
2024-12-06 00:45:21,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None
2024-12-06 00:45:22,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None
2024-12-06 00:45:22,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2024-12-06 00:45:23,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-06 00:45:23,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-06 00:45:24,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2024-12-06 00:45:24,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2
2024-12-06 00:45:24,539 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure'
2024-12-06 00:45:25,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None
2024-12-06 00:45:25,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None
2024-12-06 00:45:26,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2024-12-06 00:45:26,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-06 00:45:26,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2024-12-06 00:45:27,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2
2024-12-06 00:45:27,332 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix'
2024-12-06 00:45:27,333 [ scc.repo] DEBUG ## Branches found:
2024-12-06 00:45:27,333 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2024-12-06 00:45:27,333 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:45:27,333 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:45:27,339 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-06 00:45:27,345 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-06 00:45:27,346 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-06 00:45:27,352 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-06 00:45:27,358 [ scc.git] DEBUG Already up to date.
2024-12-06 00:45:27,358 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head'
2024-12-06 00:45:28,746 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-12-06 00:45:28,747 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD
2024-12-06 00:45:28,752 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head'
2024-12-06 00:45:31,047 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-12-06 00:45:31,048 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD
2024-12-06 00:45:31,052 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head'
2024-12-06 00:45:31,464 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-12-06 00:45:31,464 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD
2024-12-06 00:45:31,469 [ scc.git] DEBUG ## Unique users: []
2024-12-06 00:45:31,469 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:45:31,469 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:45:31,475 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30'
2024-12-06 00:45:31,483 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:45:31,489 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30'
2024-12-06 00:45:31,558 [ scc.git] DEBUG Auto-merging src/model/image_info.js
2024-12-06 00:45:31,559 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-06 00:45:31,562 [ scc.git] DEBUG src/model/image_info.js | 7 ++++---
2024-12-06 00:45:31,562 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++-
2024-12-06 00:45:31,563 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-)
2024-12-06 00:45:31,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:45:31,701 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd'
2024-12-06 00:45:31,713 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:45:31,721 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd'
2024-12-06 00:45:31,882 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py
2024-12-06 00:45:31,882 [ scc.git] DEBUG Auto-merging src/app/context.js
2024-12-06 00:45:31,882 [ scc.git] DEBUG Auto-merging src/utils/constants.js
2024-12-06 00:45:31,882 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js
2024-12-06 00:45:31,883 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-06 00:45:31,887 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++-
2024-12-06 00:45:31,887 [ scc.git] DEBUG src/app/context.js | 6 +-
2024-12-06 00:45:31,887 [ scc.git] DEBUG src/app/header.html | 5 +
2024-12-06 00:45:31,887 [ scc.git] DEBUG src/app/header.js | 45 ++++++++-
2024-12-06 00:45:31,887 [ scc.git] DEBUG src/utils/constants.js | 6 ++
2024-12-06 00:45:31,887 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++
2024-12-06 00:45:31,887 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-)
2024-12-06 00:45:31,888 [ scc.git] DEBUG create mode 100644 src/utils/figure.js
2024-12-06 00:45:32,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:45:32,102 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9'
2024-12-06 00:45:32,112 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:45:32,117 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9'
2024-12-06 00:45:32,217 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js
2024-12-06 00:45:32,217 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-06 00:45:32,221 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +-
2024-12-06 00:45:32,221 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++
2024-12-06 00:45:32,221 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-)
2024-12-06 00:45:32,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:45:32,489 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-06 00:45:32,529 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:45:32,530 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:45:32,536 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-06 00:45:32,573 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-06 00:45:32,581 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf581e9610> has no local changes
2024-12-06 00:45:32,581 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-iviewer
Excluded PRs:
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
Already up to date.
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)'
2024-12-06 00:45:32,590 [ scc.git] DEBUG [detached HEAD d7fac40] merge master -Dorg -Ssuccess-only
2024-12-06 00:45:32,590 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-06 00:45:32,591 [ scc.repo] DEBUG ## PRs found:
2024-12-06 00:45:32,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None
2024-12-06 00:45:33,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None
2024-12-06 00:45:34,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None
2024-12-06 00:45:34,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2024-12-06 00:45:35,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-06 00:45:35,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2024-12-06 00:45:35,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2
2024-12-06 00:45:35,908 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient'
2024-12-06 00:45:35,908 [ scc.repo] DEBUG ## Branches found:
2024-12-06 00:45:35,908 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2024-12-06 00:45:35,908 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:45:35,908 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:45:35,916 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-06 00:45:35,922 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-06 00:45:35,923 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-06 00:45:35,930 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-06 00:45:35,937 [ scc.git] DEBUG Already up to date.
2024-12-06 00:45:35,938 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head'
2024-12-06 00:45:37,208 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2024-12-06 00:45:37,208 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD
2024-12-06 00:45:37,213 [ scc.git] DEBUG ## Unique users: []
2024-12-06 00:45:37,213 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:45:37,213 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:45:37,220 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322'
2024-12-06 00:45:37,227 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:45:37,232 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322'
2024-12-06 00:45:37,242 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-06 00:45:37,246 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++
2024-12-06 00:45:37,246 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 ---------------------
2024-12-06 00:45:37,246 [ scc.git] DEBUG requirements.txt | 2 +-
2024-12-06 00:45:37,246 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-)
2024-12-06 00:45:37,246 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html
2024-12-06 00:45:37,246 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html
2024-12-06 00:45:37,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:45:37,389 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-06 00:45:37,431 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:45:37,432 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:45:37,439 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-06 00:45:37,477 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-06 00:45:37,484 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf581fcbb0> has no local changes
2024-12-06 00:45:37,485 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)'
2024-12-06 00:45:37,493 [ scc.git] DEBUG [detached HEAD e4f11ab] merge master -Dorg -Ssuccess-only
2024-12-06 00:45:37,493 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-06 00:45:37,494 [ scc.repo] DEBUG ## PRs found:
2024-12-06 00:45:37,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None
2024-12-06 00:45:38,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None
2024-12-06 00:45:38,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None
2024-12-06 00:45:39,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2024-12-06 00:45:39,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-06 00:45:40,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2024-12-06 00:45:40,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2
2024-12-06 00:45:40,891 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2024-12-06 00:45:41,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None
2024-12-06 00:45:41,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None
2024-12-06 00:45:42,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2024-12-06 00:45:42,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-06 00:45:43,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2024-12-06 00:45:43,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2
2024-12-06 00:45:43,653 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2024-12-06 00:45:43,653 [ scc.repo] DEBUG ## Branches found:
2024-12-06 00:45:43,654 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2024-12-06 00:45:43,654 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:45:43,654 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:45:43,661 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-06 00:45:43,667 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-06 00:45:43,668 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-06 00:45:43,793 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-06 00:45:43,805 [ scc.git] DEBUG Updating fc20959..3cd120c
2024-12-06 00:45:44,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/89 HTTP/1.1" 200 None
2024-12-06 00:45:44,317 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head'
2024-12-06 00:45:44,838 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2024-12-06 00:45:44,838 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD
2024-12-06 00:45:44,844 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head'
2024-12-06 00:45:45,480 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2024-12-06 00:45:45,481 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD
2024-12-06 00:45:45,486 [ scc.git] DEBUG ## Unique users: []
2024-12-06 00:45:45,486 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:45:45,486 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:45:45,494 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-12-06 00:45:45,500 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:45:45,505 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-12-06 00:45:45,751 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py
2024-12-06 00:45:45,751 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py
2024-12-06 00:45:45,751 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2024-12-06 00:45:45,751 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2024-12-06 00:45:45,751 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-06 00:45:45,751 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-06 00:45:45,758 [ scc.git] DEBUG Calling 'git reset --hard 3cd120cf6f10f71421a4db91fa87baba865c7997'
2024-12-06 00:45:45,764 [ scc.git] DEBUG HEAD is now at 3cd120c Merge pull request #89 from jburel/build
2024-12-06 00:45:45,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:45:45,894 [ scc.git] DEBUG Calling 'git merge-base 3cd120cf6f10f71421a4db91fa87baba865c7997 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-12-06 00:45:45,902 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..3cd120cf6f10f71421a4db91fa87baba865c7997'
2024-12-06 00:45:45,966 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
Conflicting PR. Removed from build [OMERO-plugins-push#270](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/consoleText) for more details.
Possible conflicts:
- Upstream changes
- src/omero_metadata/cli.py
- src/omero_metadata/populate.py
--conflicts
2024-12-06 00:45:45,974 [ scc.config] DEBUG Found github.token
2024-12-06 00:45:45,974 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts.
2024-12-06 00:45:45,974 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7'
2024-12-06 00:45:45,982 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:45:45,988 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7'
2024-12-06 00:45:46,016 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2024-12-06 00:45:46,016 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2024-12-06 00:45:46,016 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py
2024-12-06 00:45:46,016 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-06 00:45:46,017 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-06 00:45:46,023 [ scc.git] DEBUG Calling 'git reset --hard 3cd120cf6f10f71421a4db91fa87baba865c7997'
2024-12-06 00:45:46,031 [ scc.git] DEBUG HEAD is now at 3cd120c Merge pull request #89 from jburel/build
2024-12-06 00:45:46,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:45:46,278 [ scc.git] DEBUG Calling 'git merge-base 3cd120cf6f10f71421a4db91fa87baba865c7997 78e55539b68e351ed5ef202854718b49a37729a7'
2024-12-06 00:45:46,286 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..3cd120cf6f10f71421a4db91fa87baba865c7997'
2024-12-06 00:45:46,292 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
Conflicting PR. Removed from build [OMERO-plugins-push#270](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/consoleText) for more details.
Possible conflicts:
- PR #55 kkoz 'Prevent users from creating columns with python keyword names'
- src/omero_metadata/populate.py
- Upstream changes
- src/omero_metadata/populate.py
--conflicts
2024-12-06 00:45:46,297 [ scc.config] DEBUG Found github.token
2024-12-06 00:45:46,297 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts.
2024-12-06 00:45:46,298 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-06 00:45:46,336 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:45:46,336 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:45:46,341 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-06 00:45:46,381 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-06 00:45:46,388 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf581a4880> has no local changes
2024-12-06 00:45:46,388 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-metadata
Updating fc20959..3cd120c
Previously merged:
- PR 89 jburel 'Build'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)'
2024-12-06 00:45:46,398 [ scc.git] DEBUG [detached HEAD 66118dc] merge master -Dorg -Ssuccess-only
2024-12-06 00:45:46,398 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-06 00:45:46,398 [ scc.repo] DEBUG ## PRs found:
2024-12-06 00:45:46,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None
2024-12-06 00:45:47,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None
2024-12-06 00:45:47,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None
2024-12-06 00:45:48,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None
2024-12-06 00:45:48,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None
2024-12-06 00:45:49,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None
2024-12-06 00:45:49,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None
2024-12-06 00:45:49,774 [ scc.repo] DEBUG ## Branches found:
2024-12-06 00:45:49,775 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2024-12-06 00:45:49,775 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:45:49,775 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:45:49,782 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-06 00:45:49,787 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-06 00:45:49,788 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-06 00:45:49,793 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-06 00:45:49,805 [ scc.git] DEBUG Updating 5d441c2..fb5ae86
2024-12-06 00:45:50,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/133 HTTP/1.1" 200 None
2024-12-06 00:45:51,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/129 HTTP/1.1" 200 None
2024-12-06 00:45:51,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/131 HTTP/1.1" 200 None
2024-12-06 00:45:52,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls/128 HTTP/1.1" 200 None
2024-12-06 00:45:52,374 [ scc.git] DEBUG ## Unique users: []
2024-12-06 00:45:52,374 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:45:52,375 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:45:52,381 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-06 00:45:52,420 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:45:52,420 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:45:52,425 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-06 00:45:52,464 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-06 00:45:52,473 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf581a4670> has no local changes
2024-12-06 00:45:52,473 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-parade
Excluded PRs:
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Updating 5d441c2..fb5ae86
Previously merged:
- PR 133 jburel 'Build'
- PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
- PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
- PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)'
2024-12-06 00:45:52,484 [ scc.git] DEBUG [detached HEAD 15333ff] merge master -Dorg -Ssuccess-only
2024-12-06 00:45:52,484 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-06 00:45:52,484 [ scc.repo] DEBUG ## PRs found:
2024-12-06 00:45:52,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None
2024-12-06 00:45:53,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/15 HTTP/1.1" 200 None
2024-12-06 00:45:53,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332 HTTP/1.1" 200 None
2024-12-06 00:45:54,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-06 00:45:54,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/b5d953edc0b64a1bba13e9d5d90f3f9e68b7a332/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-06 00:45:55,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None
2024-12-06 00:45:55,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None
2024-12-06 00:45:56,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-06 00:45:56,709 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None
2024-12-06 00:45:57,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2
2024-12-06 00:45:57,140 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel'
2024-12-06 00:45:57,140 [ scc.repo] DEBUG ## Branches found:
2024-12-06 00:45:57,140 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2024-12-06 00:45:57,141 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:45:57,141 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:45:57,147 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-06 00:45:57,153 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-06 00:45:57,153 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-06 00:45:57,158 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-06 00:45:57,164 [ scc.git] DEBUG Already up to date.
2024-12-06 00:45:57,164 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2024-12-06 00:45:57,464 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools
2024-12-06 00:45:57,465 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2024-12-06 00:45:57,470 [ scc.git] DEBUG ## Unique users: []
2024-12-06 00:45:57,471 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:45:57,471 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:45:57,476 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e'
2024-12-06 00:45:57,482 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:45:57,487 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e'
2024-12-06 00:45:57,495 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-06 00:45:57,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:45:57,647 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-06 00:45:57,688 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:45:57,688 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:45:57,694 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-06 00:45:57,736 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-06 00:45:57,746 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf581f3cd0> has no local changes
2024-12-06 00:45:57,746 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-prometheus-tools
Excluded PRs:
- PR 15 jburel 'Build' (status: failure)
Already up to date.
Merged PRs:
- PR 14 jburel 'use conda-forge channel'
Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)'
2024-12-06 00:45:57,756 [ scc.git] DEBUG [detached HEAD fe52e40] merge master -Dorg -Ssuccess-only
2024-12-06 00:45:57,756 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-06 00:45:57,757 [ scc.repo] DEBUG ## PRs found:
2024-12-06 00:45:58,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None
2024-12-06 00:45:58,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/29 HTTP/1.1" 200 None
2024-12-06 00:45:59,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None
2024-12-06 00:45:59,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-06 00:46:00,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None
2024-12-06 00:46:00,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24?per_page=1 HTTP/1.1" 200 None
2024-12-06 00:46:00,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24 HTTP/1.1" 200 None
2024-12-06 00:46:01,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24/status HTTP/1.1" 200 None
2024-12-06 00:46:01,408 [ scc.repo] DEBUG - PR 29 jburel 'Build'
2024-12-06 00:46:01,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None
2024-12-06 00:46:02,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None
2024-12-06 00:46:02,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None
2024-12-06 00:46:03,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None
2024-12-06 00:46:03,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-06 00:46:04,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None
2024-12-06 00:46:04,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2
2024-12-06 00:46:04,643 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id'
2024-12-06 00:46:04,643 [ scc.repo] DEBUG ## Branches found:
2024-12-06 00:46:04,643 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2024-12-06 00:46:04,643 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:46:04,644 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:04,653 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-06 00:46:04,662 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-06 00:46:04,662 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-06 00:46:04,669 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-06 00:46:04,676 [ scc.git] DEBUG Already up to date.
2024-12-06 00:46:04,676 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head'
2024-12-06 00:46:05,107 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2024-12-06 00:46:05,107 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD
2024-12-06 00:46:05,114 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head'
2024-12-06 00:46:05,649 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2024-12-06 00:46:05,649 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD
2024-12-06 00:46:05,654 [ scc.git] DEBUG ## Unique users: []
2024-12-06 00:46:05,654 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:46:05,654 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:05,661 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61'
2024-12-06 00:46:05,668 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:05,675 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61'
2024-12-06 00:46:05,691 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py
2024-12-06 00:46:05,691 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-06 00:46:05,694 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++
2024-12-06 00:46:05,694 [ scc.git] DEBUG 1 file changed, 33 insertions(+)
2024-12-06 00:46:05,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:46:05,847 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24'
2024-12-06 00:46:05,855 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:05,862 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Build) 92f4771ebb5da70c8bfef5cf9c24bcef7fe8db24'
2024-12-06 00:46:05,879 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-06 00:46:05,882 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +-
2024-12-06 00:46:05,882 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++-----
2024-12-06 00:46:05,882 [ scc.git] DEBUG 2 files changed, 8 insertions(+), 6 deletions(-)
2024-12-06 00:46:06,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:46:06,234 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-06 00:46:06,277 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:46:06,278 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:06,283 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-06 00:46:06,326 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-06 00:46:06,333 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf581d0730> has no local changes
2024-12-06 00:46:06,333 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-rois
Excluded PRs:
- PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 6 dominikl 'Add method to create masks grouped by label id'
- PR 29 jburel 'Build'
Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)'
2024-12-06 00:46:06,341 [ scc.git] DEBUG [detached HEAD aa5c279] merge master -Dorg -Ssuccess-only
2024-12-06 00:46:06,341 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-06 00:46:06,342 [ scc.repo] DEBUG ## PRs found:
2024-12-06 00:46:06,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None
2024-12-06 00:46:07,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/21 HTTP/1.1" 200 None
2024-12-06 00:46:07,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1 HTTP/1.1" 200 None
2024-12-06 00:46:08,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-06 00:46:08,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-06 00:46:09,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1 HTTP/1.1" 200 None
2024-12-06 00:46:09,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/d8cd79097b8e36aef506d1589aa1bc281a0fc1b1?per_page=1 HTTP/1.1" 200 2
2024-12-06 00:46:09,596 [ scc.repo] DEBUG - PR 21 jburel 'Build'
2024-12-06 00:46:10,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None
2024-12-06 00:46:10,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None
2024-12-06 00:46:11,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2024-12-06 00:46:11,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-06 00:46:12,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2024-12-06 00:46:12,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2
2024-12-06 00:46:12,589 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)'
2024-12-06 00:46:12,589 [ scc.repo] DEBUG ## Branches found:
2024-12-06 00:46:12,589 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2024-12-06 00:46:12,589 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:46:12,589 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:12,597 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-06 00:46:12,602 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-06 00:46:12,602 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-06 00:46:12,608 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-06 00:46:12,614 [ scc.git] DEBUG Already up to date.
2024-12-06 00:46:12,614 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2024-12-06 00:46:12,972 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2024-12-06 00:46:12,973 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2024-12-06 00:46:12,978 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head'
2024-12-06 00:46:13,744 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2024-12-06 00:46:13,744 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD
2024-12-06 00:46:13,749 [ scc.git] DEBUG ## Unique users: []
2024-12-06 00:46:13,750 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:46:13,750 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:13,757 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-12-06 00:46:13,763 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:13,770 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-12-06 00:46:13,880 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py
2024-12-06 00:46:13,881 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py
2024-12-06 00:46:13,881 [ scc.git] DEBUG Auto-merging omero_signup/urls.py
2024-12-06 00:46:13,881 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py
2024-12-06 00:46:13,881 [ scc.git] DEBUG Auto-merging omero_signup/views.py
2024-12-06 00:46:13,881 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py
2024-12-06 00:46:13,881 [ scc.git] DEBUG Auto-merging setup.py
2024-12-06 00:46:13,881 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py
2024-12-06 00:46:13,881 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-06 00:46:13,881 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-06 00:46:13,888 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319'
2024-12-06 00:46:13,895 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0
2024-12-06 00:46:14,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:46:14,063 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-12-06 00:46:14,071 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319'
2024-12-06 00:46:14,078 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
Conflicting PR. Removed from build [OMERO-plugins-push#270](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/consoleText) for more details.
Possible conflicts:
- Upstream changes
- setup.py
- omero_signup/views.py
- omero_signup/urls.py
- omero_signup/signup_settings.py
--conflicts
2024-12-06 00:46:14,084 [ scc.config] DEBUG Found github.token
2024-12-06 00:46:14,085 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts.
2024-12-06 00:46:14,085 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8cd79097b8e36aef506d1589aa1bc281a0fc1b1'
2024-12-06 00:46:14,093 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:14,101 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Build) d8cd79097b8e36aef506d1589aa1bc281a0fc1b1'
2024-12-06 00:46:14,115 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-06 00:46:14,118 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +-
2024-12-06 00:46:14,118 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++-----
2024-12-06 00:46:14,118 [ scc.git] DEBUG .omeroci/app-build | 19 +++++++++++++++++++
2024-12-06 00:46:14,118 [ scc.git] DEBUG 3 files changed, 27 insertions(+), 6 deletions(-)
2024-12-06 00:46:14,118 [ scc.git] DEBUG create mode 100755 .omeroci/app-build
2024-12-06 00:46:14,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:46:14,460 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-06 00:46:14,504 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:46:14,504 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:14,510 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-06 00:46:14,551 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-06 00:46:14,559 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf581d0610> has no local changes
2024-12-06 00:46:14,559 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-signup
Already up to date.
Merged PRs:
- PR 21 jburel 'Build'
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)'
2024-12-06 00:46:14,569 [ scc.git] DEBUG [detached HEAD 3eb3957] merge master -Dorg -Ssuccess-only
2024-12-06 00:46:14,569 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-06 00:46:14,570 [ scc.repo] DEBUG ## PRs found:
2024-12-06 00:46:14,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None
2024-12-06 00:46:15,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None
2024-12-06 00:46:15,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None
2024-12-06 00:46:16,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2024-12-06 00:46:16,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-06 00:46:17,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2024-12-06 00:46:17,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2
2024-12-06 00:46:17,848 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2024-12-06 00:46:17,849 [ scc.repo] DEBUG ## Branches found:
2024-12-06 00:46:17,849 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2024-12-06 00:46:17,849 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:46:17,849 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:17,857 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-06 00:46:17,862 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-06 00:46:17,862 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-06 00:46:17,870 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-06 00:46:17,876 [ scc.git] DEBUG Already up to date.
2024-12-06 00:46:17,877 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head'
2024-12-06 00:46:18,339 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2024-12-06 00:46:18,339 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD
2024-12-06 00:46:18,344 [ scc.git] DEBUG ## Unique users: []
2024-12-06 00:46:18,344 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:46:18,344 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:18,350 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928'
2024-12-06 00:46:18,358 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:18,363 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928'
2024-12-06 00:46:18,454 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-06 00:46:18,458 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++
2024-12-06 00:46:18,458 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++
2024-12-06 00:46:18,458 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++
2024-12-06 00:46:18,458 [ scc.git] DEBUG idr/70-reset-password.sh | 1 +
2024-12-06 00:46:18,459 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 +
2024-12-06 00:46:18,459 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 +
2024-12-06 00:46:18,459 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++
2024-12-06 00:46:18,459 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++
2024-12-06 00:46:18,459 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++
2024-12-06 00:46:18,459 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++
2024-12-06 00:46:18,459 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++
2024-12-06 00:46:18,459 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++
2024-12-06 00:46:18,461 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++
2024-12-06 00:46:18,461 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++
2024-12-06 00:46:18,461 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++
2024-12-06 00:46:18,461 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++
2024-12-06 00:46:18,461 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++
2024-12-06 00:46:18,461 [ scc.git] DEBUG idr/omero/Dockerfile | 3 +
2024-12-06 00:46:18,461 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++
2024-12-06 00:46:18,461 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++
2024-12-06 00:46:18,461 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++
2024-12-06 00:46:18,461 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++
2024-12-06 00:46:18,461 [ scc.git] DEBUG 22 files changed, 824 insertions(+)
2024-12-06 00:46:18,461 [ scc.git] DEBUG create mode 100644 idr-compose.yml
2024-12-06 00:46:18,461 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml
2024-12-06 00:46:18,461 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh
2024-12-06 00:46:18,461 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh
2024-12-06 00:46:18,462 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf
2024-12-06 00:46:18,462 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf
2024-12-06 00:46:18,462 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf
2024-12-06 00:46:18,462 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf
2024-12-06 00:46:18,462 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf
2024-12-06 00:46:18,462 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf
2024-12-06 00:46:18,462 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf
2024-12-06 00:46:18,462 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf
2024-12-06 00:46:18,462 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf
2024-12-06 00:46:18,462 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf
2024-12-06 00:46:18,462 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf
2024-12-06 00:46:18,462 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf
2024-12-06 00:46:18,462 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf
2024-12-06 00:46:18,462 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile
2024-12-06 00:46:18,462 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml
2024-12-06 00:46:18,462 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile
2024-12-06 00:46:18,462 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile
2024-12-06 00:46:18,462 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml
2024-12-06 00:46:18,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:46:18,606 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-06 00:46:18,649 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:46:18,650 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:18,656 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-06 00:46:18,696 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-06 00:46:18,704 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf581a7c70> has no local changes
2024-12-06 00:46:18,704 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-test-infra
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)'
2024-12-06 00:46:18,713 [ scc.git] DEBUG [detached HEAD d2fd688] merge master -Dorg -Ssuccess-only
2024-12-06 00:46:18,713 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-06 00:46:18,714 [ scc.repo] DEBUG ## PRs found:
2024-12-06 00:46:19,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2
2024-12-06 00:46:19,024 [ scc.repo] DEBUG ## Branches found:
2024-12-06 00:46:19,024 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2024-12-06 00:46:19,024 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:46:19,024 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:19,030 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-06 00:46:19,035 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-06 00:46:19,035 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-06 00:46:19,041 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-06 00:46:19,050 [ scc.git] DEBUG Updating aca9e9c..100f6ae
2024-12-06 00:46:19,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls/13 HTTP/1.1" 200 None
2024-12-06 00:46:19,776 [ scc.git] DEBUG ## Unique users: []
2024-12-06 00:46:19,776 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:46:19,776 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:19,781 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-06 00:46:19,819 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:46:19,819 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:19,824 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-06 00:46:19,862 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-06 00:46:19,868 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf581f9d90> has no local changes
2024-12-06 00:46:19,868 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-upload
Updating aca9e9c..100f6ae
Previously merged:
- PR 13 jburel 'Build'
Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)'
2024-12-06 00:46:19,876 [ scc.git] DEBUG [detached HEAD 2afbdb7] merge master -Dorg -Ssuccess-only
2024-12-06 00:46:19,877 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-06 00:46:19,877 [ scc.repo] DEBUG ## PRs found:
2024-12-06 00:46:20,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None
2024-12-06 00:46:20,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/20 HTTP/1.1" 200 None
2024-12-06 00:46:21,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None
2024-12-06 00:46:21,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-06 00:46:22,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-06 00:46:22,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/14c890a5b62ef9937c751230251154351debb9ea HTTP/1.1" 200 None
2024-12-06 00:46:23,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/14c890a5b62ef9937c751230251154351debb9ea?per_page=1 HTTP/1.1" 200 2
2024-12-06 00:46:23,042 [ scc.repo] DEBUG - PR 20 jburel 'Build'
2024-12-06 00:46:23,042 [ scc.repo] DEBUG ## Branches found:
2024-12-06 00:46:23,042 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2024-12-06 00:46:23,042 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:46:23,042 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:23,051 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-06 00:46:23,058 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-06 00:46:23,059 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-06 00:46:23,067 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-06 00:46:23,088 [ scc.git] DEBUG Already up to date.
2024-12-06 00:46:23,088 [ scc.git] DEBUG Calling 'git fetch origin pull/20/head'
2024-12-06 00:46:23,491 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope
2024-12-06 00:46:23,491 [ scc.git] DEBUG * branch refs/pull/20/head -> FETCH_HEAD
2024-12-06 00:46:23,496 [ scc.git] DEBUG ## Unique users: []
2024-12-06 00:46:23,496 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:46:23,496 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:23,503 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14c890a5b62ef9937c751230251154351debb9ea'
2024-12-06 00:46:23,509 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:23,514 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 20 (Build) 14c890a5b62ef9937c751230251154351debb9ea'
2024-12-06 00:46:23,532 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-06 00:46:23,535 [ scc.git] DEBUG .github/workflows/omero_plugin.yml | 2 +-
2024-12-06 00:46:23,535 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 12 +++++++-----
2024-12-06 00:46:23,535 [ scc.git] DEBUG .omeroci/app-build | 19 +++++++++++++++++++
2024-12-06 00:46:23,535 [ scc.git] DEBUG 3 files changed, 27 insertions(+), 6 deletions(-)
2024-12-06 00:46:23,535 [ scc.git] DEBUG create mode 100755 .omeroci/app-build
2024-12-06 00:46:23,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:46:23,678 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-06 00:46:23,719 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:46:23,720 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:23,726 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-06 00:46:23,767 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-06 00:46:23,775 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf58132fd0> has no local changes
2024-12-06 00:46:23,775 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-virtual-microscope
Already up to date.
Merged PRs:
- PR 20 jburel 'Build'
Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)'
2024-12-06 00:46:23,785 [ scc.git] DEBUG [detached HEAD 2a58cb8] merge master -Dorg -Ssuccess-only
2024-12-06 00:46:23,785 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-06 00:46:23,785 [ scc.git] INFO Overriding base-branch from master to main
2024-12-06 00:46:23,785 [ scc.repo] DEBUG ## PRs found:
2024-12-06 00:46:24,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None
2024-12-06 00:46:24,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18 HTTP/1.1" 200 None
2024-12-06 00:46:25,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18/comments HTTP/1.1" 200 None
2024-12-06 00:46:25,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec HTTP/1.1" 200 None
2024-12-06 00:46:26,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-06 00:46:26,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-06 00:46:27,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/17 HTTP/1.1" 200 None
2024-12-06 00:46:27,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/17/comments HTTP/1.1" 200 None
2024-12-06 00:46:28,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/020e85775bda54e9136b3fb9e699411e0d4f8c95 HTTP/1.1" 200 None
2024-12-06 00:46:28,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/020e85775bda54e9136b3fb9e699411e0d4f8c95/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-06 00:46:29,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/020e85775bda54e9136b3fb9e699411e0d4f8c95/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-06 00:46:29,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None
2024-12-06 00:46:30,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None
2024-12-06 00:46:30,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None
2024-12-06 00:46:31,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2024-12-06 00:46:31,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-06 00:46:32,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2024-12-06 00:46:32,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2
2024-12-06 00:46:32,574 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2024-12-06 00:46:32,575 [ scc.repo] DEBUG ## Branches found:
2024-12-06 00:46:32,575 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2024-12-06 00:46:32,575 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:46:32,575 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:32,582 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main'
2024-12-06 00:46:32,587 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-06 00:46:32,588 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main'
2024-12-06 00:46:32,594 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main'
2024-12-06 00:46:32,600 [ scc.git] DEBUG Already up to date.
2024-12-06 00:46:32,600 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head'
2024-12-06 00:46:33,084 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2024-12-06 00:46:33,084 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD
2024-12-06 00:46:33,089 [ scc.git] DEBUG ## Unique users: []
2024-12-06 00:46:33,089 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:46:33,089 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:33,096 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-12-06 00:46:33,102 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:33,107 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-12-06 00:46:33,118 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py
2024-12-06 00:46:33,118 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py
2024-12-06 00:46:33,118 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-06 00:46:33,118 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-06 00:46:33,124 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94'
2024-12-06 00:46:33,130 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0
2024-12-06 00:46:33,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:46:33,276 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-12-06 00:46:33,282 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94'
2024-12-06 00:46:33,288 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Conflicting PR. Removed from build [OMERO-plugins-push#270](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_web_zarr/urls.py
--conflicts
2024-12-06 00:46:33,293 [ scc.config] DEBUG Found github.token
2024-12-06 00:46:33,293 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts.
2024-12-06 00:46:33,293 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-06 00:46:33,336 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:46:33,337 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:33,343 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-06 00:46:33,383 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-06 00:46:33,390 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf581324c0> has no local changes
2024-12-06 00:46:33,390 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 18 will-moore 'Build' (status: failure)
- PR 17 jburel 'Build' (status: failure)
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)'
2024-12-06 00:46:33,398 [ scc.git] DEBUG [detached HEAD 6655a6c] merge master -Dorg -Ssuccess-only
2024-12-06 00:46:33,398 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-06 00:46:33,399 [ scc.repo] DEBUG ## PRs found:
2024-12-06 00:46:33,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2
2024-12-06 00:46:33,722 [ scc.repo] DEBUG ## Branches found:
2024-12-06 00:46:33,722 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2024-12-06 00:46:33,722 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:46:33,722 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:33,728 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-06 00:46:33,733 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-06 00:46:33,733 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-06 00:46:33,738 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-06 00:46:33,748 [ scc.git] DEBUG Updating adfa132..70b01ed
2024-12-06 00:46:34,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls/24 HTTP/1.1" 200 None
2024-12-06 00:46:34,427 [ scc.git] DEBUG ## Unique users: []
2024-12-06 00:46:34,427 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:46:34,427 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:34,433 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-06 00:46:34,472 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:46:34,472 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:34,477 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-06 00:46:34,516 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-06 00:46:34,523 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf58143c10> has no local changes
2024-12-06 00:46:34,523 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-weberror
Updating adfa132..70b01ed
Previously merged:
- PR 24 jburel 'Build'
Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)'
2024-12-06 00:46:34,532 [ scc.git] DEBUG [detached HEAD 46d041c] merge master -Dorg -Ssuccess-only
2024-12-06 00:46:34,532 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-06 00:46:34,532 [ scc.repo] DEBUG ## PRs found:
2024-12-06 00:46:34,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2
2024-12-06 00:46:34,834 [ scc.repo] DEBUG ## Branches found:
2024-12-06 00:46:34,834 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2024-12-06 00:46:34,834 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:46:34,834 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:34,840 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-06 00:46:34,844 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-06 00:46:34,845 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-06 00:46:34,850 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-06 00:46:34,859 [ scc.git] DEBUG Updating 8da48e1..5bfef29
2024-12-06 00:46:35,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls/36 HTTP/1.1" 200 None
2024-12-06 00:46:35,583 [ scc.git] DEBUG ## Unique users: []
2024-12-06 00:46:35,583 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:46:35,583 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:35,589 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-06 00:46:35,628 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:46:35,628 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:35,634 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-06 00:46:35,672 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-06 00:46:35,679 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf580e9970> has no local changes
2024-12-06 00:46:35,679 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-webtest
Updating 8da48e1..5bfef29
Previously merged:
- PR 36 jburel 'Build'
Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)'
2024-12-06 00:46:35,687 [ scc.git] DEBUG [detached HEAD 797bbcb] merge master -Dorg -Ssuccess-only
2024-12-06 00:46:35,688 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-06 00:46:35,688 [ scc.repo] DEBUG ## PRs found:
2024-12-06 00:46:36,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None
2024-12-06 00:46:36,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None
2024-12-06 00:46:37,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None
2024-12-06 00:46:37,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2024-12-06 00:46:37,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-06 00:46:38,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2024-12-06 00:46:38,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2
2024-12-06 00:46:38,894 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly'
2024-12-06 00:46:38,895 [ scc.repo] DEBUG ## Branches found:
2024-12-06 00:46:38,895 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2024-12-06 00:46:38,895 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:46:38,895 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:38,901 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-12-06 00:46:38,907 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-06 00:46:38,907 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-12-06 00:46:38,912 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-12-06 00:46:38,919 [ scc.git] DEBUG Already up to date.
2024-12-06 00:46:38,920 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head'
2024-12-06 00:46:39,254 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway
2024-12-06 00:46:39,255 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD
2024-12-06 00:46:39,259 [ scc.git] DEBUG ## Unique users: []
2024-12-06 00:46:39,259 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:46:39,259 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:39,265 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-12-06 00:46:39,271 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:39,276 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-12-06 00:46:39,288 [ scc.git] DEBUG Auto-merging Dockerfile
2024-12-06 00:46:39,289 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile
2024-12-06 00:46:39,289 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-06 00:46:39,289 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-06 00:46:39,295 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2024-12-06 00:46:39,302 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2024-12-06 00:46:39,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:46:39,436 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-12-06 00:46:39,443 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2024-12-06 00:46:39,449 [ scc.git] INFO - PR 100 dominikl 'Run tests properly'
Conflicting PR. Removed from build [OMERO-plugins-push#270](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/consoleText) for more details.
Possible conflicts:
- Upstream changes
- Dockerfile
--conflicts
2024-12-06 00:46:39,453 [ scc.config] DEBUG Found github.token
2024-12-06 00:46:39,454 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts.
2024-12-06 00:46:39,454 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-06 00:46:39,493 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:46:39,493 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:39,499 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-06 00:46:39,536 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-06 00:46:39,543 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf580e95e0> has no local changes
2024-12-06 00:46:39,543 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)'
2024-12-06 00:46:39,551 [ scc.git] DEBUG [detached HEAD 012ce7d] merge master -Dorg -Ssuccess-only
2024-12-06 00:46:39,552 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-06 00:46:39,552 [ scc.git] INFO Overriding base-branch from master to develop
2024-12-06 00:46:39,552 [ scc.repo] DEBUG ## PRs found:
2024-12-06 00:46:40,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-12-06 00:46:40,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2024-12-06 00:46:41,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2024-12-06 00:46:41,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-12-06 00:46:41,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-06 00:46:42,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-12-06 00:46:42,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2024-12-06 00:46:43,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2024-12-06 00:46:43,249 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-12-06 00:46:43,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-12-06 00:46:44,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-12-06 00:46:44,801 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545/issues/216/comments?page=2 HTTP/1.1" 200 None
2024-12-06 00:46:45,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-12-06 00:46:45,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-12-06 00:46:46,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-12-06 00:46:46,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-12-06 00:46:47,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-12-06 00:46:47,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-12-06 00:46:47,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-12-06 00:46:48,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-12-06 00:46:48,368 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-12-06 00:46:48,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-12-06 00:46:49,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-12-06 00:46:49,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-12-06 00:46:50,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-12-06 00:46:50,316 [ scc.repo] DEBUG ## Branches found:
2024-12-06 00:46:50,316 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2024-12-06 00:46:50,316 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:46:50,316 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:50,324 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-12-06 00:46:50,330 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-12-06 00:46:50,330 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-12-06 00:46:50,337 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-12-06 00:46:50,345 [ scc.git] DEBUG Already up to date.
2024-12-06 00:46:50,345 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-12-06 00:46:50,990 [ scc.git] DEBUG From https://github.com/ome/scripts
2024-12-06 00:46:50,990 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-12-06 00:46:50,997 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2024-12-06 00:46:51,677 [ scc.git] DEBUG From https://github.com/ome/scripts
2024-12-06 00:46:51,677 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2024-12-06 00:46:51,683 [ scc.git] DEBUG ## Unique users: []
2024-12-06 00:46:51,683 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:46:51,683 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:51,690 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-12-06 00:46:51,698 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:51,703 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-12-06 00:46:51,861 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-12-06 00:46:51,861 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-12-06 00:46:51,861 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-12-06 00:46:51,862 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-12-06 00:46:51,868 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0'
2024-12-06 00:46:51,875 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0
2024-12-06 00:46:52,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:46:52,021 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-12-06 00:46:52,030 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0'
2024-12-06 00:46:52,037 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-plugins-push#270](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-12-06 00:46:52,044 [ scc.config] DEBUG Found github.token
2024-12-06 00:46:52,045 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-12-06 00:46:52,045 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-12-06 00:46:52,053 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:52,060 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2024-12-06 00:46:52,121 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-12-06 00:46:52,124 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2024-12-06 00:46:52,124 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2024-12-06 00:46:52,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:46:52,405 [ scc.git] DEBUG Calling 'git submodule update'
2024-12-06 00:46:52,446 [ scc.git] DEBUG Get sha1 of %s
2024-12-06 00:46:52,446 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-12-06 00:46:52,454 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-06 00:46:52,494 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-06 00:46:52,501 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf58176f40> has no local changes
2024-12-06 00:46:52,501 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)'
2024-12-06 00:46:52,511 [ scc.git] DEBUG [detached HEAD 39cf822] merge master -Dorg -Ssuccess-only
2024-12-06 00:46:52,511 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-06 00:46:52,511 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-12-06 00:46:52,591 [ scc.config] DEBUG Found submodule.minimal-omero-client.url
2024-12-06 00:46:52,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:46:52,830 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch
2024-12-06 00:46:52,836 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url
2024-12-06 00:46:53,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:46:53,214 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch
2024-12-06 00:46:53,223 [ scc.config] DEBUG Found submodule.omero-cli-render.url
2024-12-06 00:46:53,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:46:53,602 [ scc.config] DEBUG Found submodule.omero-cli-render.branch
2024-12-06 00:46:53,609 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url
2024-12-06 00:46:53,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:46:53,989 [ scc.config] DEBUG Found submodule.omero-figure.url
2024-12-06 00:46:54,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:46:54,365 [ scc.config] DEBUG Found submodule.omero-figure.branch
2024-12-06 00:46:54,371 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url
2024-12-06 00:46:54,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:46:54,776 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch
2024-12-06 00:46:54,781 [ scc.config] DEBUG Found submodule.omero-gallery.url
2024-12-06 00:46:55,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:46:55,166 [ scc.config] DEBUG Found submodule.omero-gallery.branch
2024-12-06 00:46:55,172 [ scc.config] DEBUG Found submodule.omero-iviewer.url
2024-12-06 00:46:55,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:46:55,588 [ scc.config] DEBUG Found submodule.omero-iviewer.branch
2024-12-06 00:46:55,593 [ scc.config] DEBUG Found submodule.omero-mapr.url
2024-12-06 00:46:55,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:46:55,968 [ scc.config] DEBUG Found submodule.omero-mapr.branch
2024-12-06 00:46:55,974 [ scc.config] DEBUG Found submodule.omero-metadata.url
2024-12-06 00:46:56,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:46:56,361 [ scc.config] DEBUG Found submodule.omero-metadata.branch
2024-12-06 00:46:56,367 [ scc.config] DEBUG Found submodule.omero-parade.url
2024-12-06 00:46:56,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:46:56,750 [ scc.config] DEBUG Found submodule.omero-parade.branch
2024-12-06 00:46:56,756 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url
2024-12-06 00:46:57,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:46:57,134 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch
2024-12-06 00:46:57,142 [ scc.config] DEBUG Found submodule.omero-rois.url
2024-12-06 00:46:57,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:46:57,563 [ scc.config] DEBUG Found submodule.omero-signup.url
2024-12-06 00:46:57,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:46:57,949 [ scc.config] DEBUG Found submodule.omero-test-infra.url
2024-12-06 00:46:58,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:46:58,332 [ scc.config] DEBUG Found submodule.omero-test-infra.branch
2024-12-06 00:46:58,337 [ scc.config] DEBUG Found submodule.omero-upload.url
2024-12-06 00:46:58,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:46:58,727 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url
2024-12-06 00:46:59,098 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:46:59,120 [ scc.config] DEBUG Found submodule.omero-web-zarr.url
2024-12-06 00:46:59,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:46:59,510 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch
2024-12-06 00:46:59,516 [ scc.config] DEBUG Found submodule.omero-weberror.url
2024-12-06 00:46:59,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:46:59,908 [ scc.config] DEBUG Found submodule.omero-weberror.branch
2024-12-06 00:46:59,914 [ scc.config] DEBUG Found submodule.omero-webtest.url
2024-12-06 00:47:00,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:47:00,337 [ scc.config] DEBUG Found submodule.omero-webtest.branch
2024-12-06 00:47:00,341 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url
2024-12-06 00:47:00,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:47:00,726 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch
2024-12-06 00:47:00,732 [ scc.config] DEBUG Found submodule.scripts.url
2024-12-06 00:47:01,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-12-06 00:47:01,113 [ scc.config] DEBUG Found submodule.scripts.branch
2024-12-06 00:47:01,113 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-12-06 00:47:01,192 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fdf5b6b6e20> has local changes
2024-12-06 00:47:01,193 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-plugins
Already up to date.
Repository: ome/minimal-omero-client
Updating 4628e82..ca8c2ea
Previously merged:
- PR 67 jburel 'Gateway 5.10.0'
- PR 68 jburel 'Bump action '
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Updating 027b3e6..4777ef8
Previously merged:
- PR 27 jburel 'Build'
- PR 25 jburel 'review message'
Repository: ome/omero-cli-render
Excluded PRs:
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
Already up to date.
Merged PRs:
- PR 59 will-moore 'Apply settings to Plate'
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Updating 9b73dd9..11d3587
Previously merged:
- PR 165 jburel 'Build'
Merged PRs:
- PR 147 will-moore 'Name option'
Conflicting PRs (not included):
- PR 102 will-moore 'Zarr export tests'
- PR 123 will-moore 'Support export of Fileset:ID'
Repository: ome/omero-figure
Excluded PRs:
- PR 600 Rdornier 'Label on rois' (user: Rdornier)
- PR 543 will-moore 'Plate well labels' (exclude comment)
Already up to date.
Merged PRs:
- PR 592 will-moore 'Filter owners and groups dropdown lists'
- PR 602 will-moore 'Changelog 7.2.0'
- PR 603 will-moore 'Inset bugfixes'
Repository: ome/omero-fpbioimage
Updating e5b3ca3..3b6c05a
Previously merged:
- PR 30 jburel 'Build'
Merged PRs:
- PR 18 jburel 'default size z value'
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- PR 114 dependabot[bot] 'Bump tar and fsevents'
- PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
Conflicting PRs (not included):
- PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
Repository: ome/omero-iviewer
Excluded PRs:
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
Already up to date.
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
Repository: ome/omero-metadata
Updating fc20959..3cd120c
Previously merged:
- PR 89 jburel 'Build'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Repository: ome/omero-parade
Excluded PRs:
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Updating 5d441c2..fb5ae86
Previously merged:
- PR 133 jburel 'Build'
- PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
- PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
- PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
Repository: ome/omero-prometheus-tools
Excluded PRs:
- PR 15 jburel 'Build' (status: failure)
Already up to date.
Merged PRs:
- PR 14 jburel 'use conda-forge channel'
Repository: ome/omero-rois
Excluded PRs:
- PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 6 dominikl 'Add method to create masks grouped by label id'
- PR 29 jburel 'Build'
Repository: ome/omero-signup
Already up to date.
Merged PRs:
- PR 21 jburel 'Build'
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Repository: openmicroscopy/omero-test-infra
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
Repository: ome/omero-upload
Updating aca9e9c..100f6ae
Previously merged:
- PR 13 jburel 'Build'
Repository: ome/omero-virtual-microscope
Already up to date.
Merged PRs:
- PR 20 jburel 'Build'
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 18 will-moore 'Build' (status: failure)
- PR 17 jburel 'Build' (status: failure)
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Repository: openmicroscopy/omero-weberror
Updating adfa132..70b01ed
Previously merged:
- PR 24 jburel 'Build'
Repository: openmicroscopy/omero-webtest
Updating 8da48e1..5bfef29
Previously merged:
- PR 36 jburel 'Build'
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Repository: ome/scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#270 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/270/)'
2024-12-06 00:47:01,207 [ scc.git] DEBUG [detached HEAD 4534c75] merge master -Dorg -Ssuccess-only
2024-12-06 00:47:01,208 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-)
2024-12-06 00:47:01,208 [ scc.merge] INFO Repository: ome/omero-plugins
2024-12-06 00:47:01,208 [ scc.merge] INFO Already up to date.
2024-12-06 00:47:01,208 [ scc.merge] INFO
2024-12-06 00:47:01,208 [ scc.merge] INFO
2024-12-06 00:47:01,208 [ scc.merge] INFO Repository: ome/minimal-omero-client
2024-12-06 00:47:01,208 [ scc.merge] INFO Updating 4628e82..ca8c2ea
2024-12-06 00:47:01,208 [ scc.merge] INFO Previously merged:
2024-12-06 00:47:01,208 [ scc.merge] INFO - PR 67 jburel 'Gateway 5.10.0'
2024-12-06 00:47:01,208 [ scc.merge] INFO - PR 68 jburel 'Bump action '
2024-12-06 00:47:01,208 [ scc.merge] INFO
2024-12-06 00:47:01,208 [ scc.merge] INFO
2024-12-06 00:47:01,208 [ scc.merge] INFO Repository: ome/omero-cli-duplicate
2024-12-06 00:47:01,208 [ scc.merge] INFO Excluded PRs:
2024-12-06 00:47:01,208 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
2024-12-06 00:47:01,208 [ scc.merge] INFO Updating 027b3e6..4777ef8
2024-12-06 00:47:01,208 [ scc.merge] INFO Previously merged:
2024-12-06 00:47:01,208 [ scc.merge] INFO - PR 27 jburel 'Build'
2024-12-06 00:47:01,208 [ scc.merge] INFO - PR 25 jburel 'review message'
2024-12-06 00:47:01,208 [ scc.merge] INFO
2024-12-06 00:47:01,208 [ scc.merge] INFO
2024-12-06 00:47:01,208 [ scc.merge] INFO Repository: ome/omero-cli-render
2024-12-06 00:47:01,209 [ scc.merge] INFO Excluded PRs:
2024-12-06 00:47:01,209 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
2024-12-06 00:47:01,209 [ scc.merge] INFO Already up to date.
2024-12-06 00:47:01,209 [ scc.merge] INFO
2024-12-06 00:47:01,209 [ scc.merge] INFO Merged PRs:
2024-12-06 00:47:01,209 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate'
2024-12-06 00:47:01,209 [ scc.merge] INFO
2024-12-06 00:47:01,209 [ scc.merge] INFO Repository: ome/omero-cli-zarr
2024-12-06 00:47:01,209 [ scc.merge] INFO Excluded PRs:
2024-12-06 00:47:01,209 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-12-06 00:47:01,209 [ scc.merge] INFO Updating 9b73dd9..11d3587
2024-12-06 00:47:01,209 [ scc.merge] INFO Previously merged:
2024-12-06 00:47:01,209 [ scc.merge] INFO - PR 165 jburel 'Build'
2024-12-06 00:47:01,209 [ scc.merge] INFO
2024-12-06 00:47:01,209 [ scc.merge] INFO Merged PRs:
2024-12-06 00:47:01,209 [ scc.merge] INFO - PR 147 will-moore 'Name option'
2024-12-06 00:47:01,209 [ scc.merge] INFO
2024-12-06 00:47:01,209 [ scc.merge] INFO Conflicting PRs (not included):
2024-12-06 00:47:01,209 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests'
2024-12-06 00:47:01,209 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID'
2024-12-06 00:47:01,209 [ scc.merge] INFO
2024-12-06 00:47:01,209 [ scc.merge] INFO Repository: ome/omero-figure
2024-12-06 00:47:01,209 [ scc.merge] INFO Excluded PRs:
2024-12-06 00:47:01,209 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' (user: Rdornier)
2024-12-06 00:47:01,209 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment)
2024-12-06 00:47:01,209 [ scc.merge] INFO Already up to date.
2024-12-06 00:47:01,209 [ scc.merge] INFO
2024-12-06 00:47:01,209 [ scc.merge] INFO Merged PRs:
2024-12-06 00:47:01,209 [ scc.merge] INFO - PR 592 will-moore 'Filter owners and groups dropdown lists'
2024-12-06 00:47:01,209 [ scc.merge] INFO - PR 602 will-moore 'Changelog 7.2.0'
2024-12-06 00:47:01,209 [ scc.merge] INFO - PR 603 will-moore 'Inset bugfixes'
2024-12-06 00:47:01,209 [ scc.merge] INFO
2024-12-06 00:47:01,209 [ scc.merge] INFO Repository: ome/omero-fpbioimage
2024-12-06 00:47:01,209 [ scc.merge] INFO Updating e5b3ca3..3b6c05a
2024-12-06 00:47:01,209 [ scc.merge] INFO Previously merged:
2024-12-06 00:47:01,209 [ scc.merge] INFO - PR 30 jburel 'Build'
2024-12-06 00:47:01,209 [ scc.merge] INFO
2024-12-06 00:47:01,209 [ scc.merge] INFO Merged PRs:
2024-12-06 00:47:01,210 [ scc.merge] INFO - PR 18 jburel 'default size z value'
2024-12-06 00:47:01,210 [ scc.merge] INFO
2024-12-06 00:47:01,210 [ scc.merge] INFO Repository: ome/omero-gallery
2024-12-06 00:47:01,210 [ scc.merge] INFO Already up to date.
2024-12-06 00:47:01,210 [ scc.merge] INFO
2024-12-06 00:47:01,210 [ scc.merge] INFO Merged PRs:
2024-12-06 00:47:01,210 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
2024-12-06 00:47:01,210 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents'
2024-12-06 00:47:01,210 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
2024-12-06 00:47:01,210 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
2024-12-06 00:47:01,210 [ scc.merge] INFO
2024-12-06 00:47:01,210 [ scc.merge] INFO Conflicting PRs (not included):
2024-12-06 00:47:01,210 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
2024-12-06 00:47:01,210 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
2024-12-06 00:47:01,210 [ scc.merge] INFO
2024-12-06 00:47:01,210 [ scc.merge] INFO Repository: ome/omero-iviewer
2024-12-06 00:47:01,210 [ scc.merge] INFO Excluded PRs:
2024-12-06 00:47:01,210 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
2024-12-06 00:47:01,210 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment)
2024-12-06 00:47:01,210 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
2024-12-06 00:47:01,210 [ scc.merge] INFO Already up to date.
2024-12-06 00:47:01,210 [ scc.merge] INFO
2024-12-06 00:47:01,210 [ scc.merge] INFO Merged PRs:
2024-12-06 00:47:01,210 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix'
2024-12-06 00:47:01,210 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure'
2024-12-06 00:47:01,210 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip'
2024-12-06 00:47:01,210 [ scc.merge] INFO
2024-12-06 00:47:01,210 [ scc.merge] INFO Repository: ome/omero-mapr
2024-12-06 00:47:01,210 [ scc.merge] INFO Excluded PRs:
2024-12-06 00:47:01,210 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment)
2024-12-06 00:47:01,210 [ scc.merge] INFO Already up to date.
2024-12-06 00:47:01,210 [ scc.merge] INFO
2024-12-06 00:47:01,210 [ scc.merge] INFO Merged PRs:
2024-12-06 00:47:01,210 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient'
2024-12-06 00:47:01,210 [ scc.merge] INFO
2024-12-06 00:47:01,210 [ scc.merge] INFO Repository: ome/omero-metadata
2024-12-06 00:47:01,210 [ scc.merge] INFO Updating fc20959..3cd120c
2024-12-06 00:47:01,210 [ scc.merge] INFO Previously merged:
2024-12-06 00:47:01,211 [ scc.merge] INFO - PR 89 jburel 'Build'
2024-12-06 00:47:01,211 [ scc.merge] INFO
2024-12-06 00:47:01,211 [ scc.merge] INFO Conflicting PRs (not included):
2024-12-06 00:47:01,211 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2024-12-06 00:47:01,211 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2024-12-06 00:47:01,211 [ scc.merge] INFO
2024-12-06 00:47:01,211 [ scc.merge] INFO Repository: ome/omero-parade
2024-12-06 00:47:01,211 [ scc.merge] INFO Excluded PRs:
2024-12-06 00:47:01,211 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
2024-12-06 00:47:01,211 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
2024-12-06 00:47:01,211 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment)
2024-12-06 00:47:01,211 [ scc.merge] INFO Updating 5d441c2..fb5ae86
2024-12-06 00:47:01,211 [ scc.merge] INFO Previously merged:
2024-12-06 00:47:01,211 [ scc.merge] INFO - PR 133 jburel 'Build'
2024-12-06 00:47:01,211 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
2024-12-06 00:47:01,211 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
2024-12-06 00:47:01,211 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
2024-12-06 00:47:01,211 [ scc.merge] INFO
2024-12-06 00:47:01,211 [ scc.merge] INFO
2024-12-06 00:47:01,211 [ scc.merge] INFO Repository: ome/omero-prometheus-tools
2024-12-06 00:47:01,211 [ scc.merge] INFO Excluded PRs:
2024-12-06 00:47:01,211 [ scc.merge] INFO - PR 15 jburel 'Build' (status: failure)
2024-12-06 00:47:01,211 [ scc.merge] INFO Already up to date.
2024-12-06 00:47:01,211 [ scc.merge] INFO
2024-12-06 00:47:01,211 [ scc.merge] INFO Merged PRs:
2024-12-06 00:47:01,211 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel'
2024-12-06 00:47:01,211 [ scc.merge] INFO
2024-12-06 00:47:01,211 [ scc.merge] INFO Repository: ome/omero-rois
2024-12-06 00:47:01,211 [ scc.merge] INFO Excluded PRs:
2024-12-06 00:47:01,211 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-12-06 00:47:01,211 [ scc.merge] INFO Already up to date.
2024-12-06 00:47:01,211 [ scc.merge] INFO
2024-12-06 00:47:01,211 [ scc.merge] INFO Merged PRs:
2024-12-06 00:47:01,211 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id'
2024-12-06 00:47:01,211 [ scc.merge] INFO - PR 29 jburel 'Build'
2024-12-06 00:47:01,211 [ scc.merge] INFO
2024-12-06 00:47:01,211 [ scc.merge] INFO Repository: ome/omero-signup
2024-12-06 00:47:01,211 [ scc.merge] INFO Already up to date.
2024-12-06 00:47:01,212 [ scc.merge] INFO
2024-12-06 00:47:01,212 [ scc.merge] INFO Merged PRs:
2024-12-06 00:47:01,212 [ scc.merge] INFO - PR 21 jburel 'Build'
2024-12-06 00:47:01,212 [ scc.merge] INFO
2024-12-06 00:47:01,212 [ scc.merge] INFO Conflicting PRs (not included):
2024-12-06 00:47:01,212 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
2024-12-06 00:47:01,212 [ scc.merge] INFO
2024-12-06 00:47:01,212 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra
2024-12-06 00:47:01,212 [ scc.merge] INFO Already up to date.
2024-12-06 00:47:01,212 [ scc.merge] INFO
2024-12-06 00:47:01,212 [ scc.merge] INFO Merged PRs:
2024-12-06 00:47:01,212 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2024-12-06 00:47:01,212 [ scc.merge] INFO
2024-12-06 00:47:01,212 [ scc.merge] INFO Repository: ome/omero-upload
2024-12-06 00:47:01,212 [ scc.merge] INFO Updating aca9e9c..100f6ae
2024-12-06 00:47:01,212 [ scc.merge] INFO Previously merged:
2024-12-06 00:47:01,212 [ scc.merge] INFO - PR 13 jburel 'Build'
2024-12-06 00:47:01,212 [ scc.merge] INFO
2024-12-06 00:47:01,212 [ scc.merge] INFO
2024-12-06 00:47:01,212 [ scc.merge] INFO Repository: ome/omero-virtual-microscope
2024-12-06 00:47:01,212 [ scc.merge] INFO Already up to date.
2024-12-06 00:47:01,212 [ scc.merge] INFO
2024-12-06 00:47:01,212 [ scc.merge] INFO Merged PRs:
2024-12-06 00:47:01,212 [ scc.merge] INFO - PR 20 jburel 'Build'
2024-12-06 00:47:01,212 [ scc.merge] INFO
2024-12-06 00:47:01,212 [ scc.merge] INFO Repository: ome/omero-web-zarr
2024-12-06 00:47:01,212 [ scc.merge] INFO Excluded PRs:
2024-12-06 00:47:01,212 [ scc.merge] INFO - PR 18 will-moore 'Build' (status: failure)
2024-12-06 00:47:01,212 [ scc.merge] INFO - PR 17 jburel 'Build' (status: failure)
2024-12-06 00:47:01,212 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
2024-12-06 00:47:01,212 [ scc.merge] INFO Already up to date.
2024-12-06 00:47:01,212 [ scc.merge] INFO
2024-12-06 00:47:01,212 [ scc.merge] INFO Conflicting PRs (not included):
2024-12-06 00:47:01,212 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2024-12-06 00:47:01,212 [ scc.merge] INFO
2024-12-06 00:47:01,212 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror
2024-12-06 00:47:01,212 [ scc.merge] INFO Updating adfa132..70b01ed
2024-12-06 00:47:01,212 [ scc.merge] INFO Previously merged:
2024-12-06 00:47:01,212 [ scc.merge] INFO - PR 24 jburel 'Build'
2024-12-06 00:47:01,213 [ scc.merge] INFO
2024-12-06 00:47:01,213 [ scc.merge] INFO
2024-12-06 00:47:01,213 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest
2024-12-06 00:47:01,213 [ scc.merge] INFO Updating 8da48e1..5bfef29
2024-12-06 00:47:01,213 [ scc.merge] INFO Previously merged:
2024-12-06 00:47:01,213 [ scc.merge] INFO - PR 36 jburel 'Build'
2024-12-06 00:47:01,213 [ scc.merge] INFO
2024-12-06 00:47:01,213 [ scc.merge] INFO
2024-12-06 00:47:01,213 [ scc.merge] INFO Repository: ome/rOMERO-gateway
2024-12-06 00:47:01,213 [ scc.merge] INFO Already up to date.
2024-12-06 00:47:01,213 [ scc.merge] INFO
2024-12-06 00:47:01,213 [ scc.merge] INFO Conflicting PRs (not included):
2024-12-06 00:47:01,213 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly'
2024-12-06 00:47:01,213 [ scc.merge] INFO
2024-12-06 00:47:01,213 [ scc.merge] INFO Repository: ome/scripts
2024-12-06 00:47:01,213 [ scc.merge] INFO Excluded PRs:
2024-12-06 00:47:01,213 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-12-06 00:47:01,213 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-12-06 00:47:01,213 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-12-06 00:47:01,213 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-12-06 00:47:01,213 [ scc.merge] INFO Already up to date.
2024-12-06 00:47:01,213 [ scc.merge] INFO
2024-12-06 00:47:01,213 [ scc.merge] INFO Merged PRs:
2024-12-06 00:47:01,213 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2024-12-06 00:47:01,213 [ scc.merge] INFO
2024-12-06 00:47:01,213 [ scc.merge] INFO Conflicting PRs (not included):
2024-12-06 00:47:01,213 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-12-06 00:47:01,213 [ scc.merge] INFO
2024-12-06 00:47:01,213 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-12-06 00:47:01,214 [ scc.git] DEBUG Calling 'git remote'
2024-12-06 00:47:01,220 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2024-12-06 00:47:01,220 [ scc.git] DEBUG Calling 'git remote'
2024-12-06 00:47:01,227 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-06 00:47:01,227 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2024-12-06 00:47:01,227 [ scc.git] DEBUG Calling 'git remote'
2024-12-06 00:47:01,233 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-06 00:47:01,233 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2024-12-06 00:47:01,234 [ scc.git] DEBUG Calling 'git remote'
2024-12-06 00:47:01,239 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-06 00:47:01,240 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2024-12-06 00:47:01,240 [ scc.git] DEBUG Calling 'git remote'
2024-12-06 00:47:01,246 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-06 00:47:01,246 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2024-12-06 00:47:01,246 [ scc.git] DEBUG Calling 'git remote'
2024-12-06 00:47:01,252 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-06 00:47:01,253 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2024-12-06 00:47:01,253 [ scc.git] DEBUG Calling 'git remote'
2024-12-06 00:47:01,259 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-06 00:47:01,259 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2024-12-06 00:47:01,259 [ scc.git] DEBUG Calling 'git remote'
2024-12-06 00:47:01,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-06 00:47:01,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2024-12-06 00:47:01,265 [ scc.git] DEBUG Calling 'git remote'
2024-12-06 00:47:01,271 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-06 00:47:01,271 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2024-12-06 00:47:01,271 [ scc.git] DEBUG Calling 'git remote'
2024-12-06 00:47:01,276 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-06 00:47:01,277 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2024-12-06 00:47:01,277 [ scc.git] DEBUG Calling 'git remote'
2024-12-06 00:47:01,283 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-06 00:47:01,283 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2024-12-06 00:47:01,283 [ scc.git] DEBUG Calling 'git remote'
2024-12-06 00:47:01,289 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-06 00:47:01,289 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2024-12-06 00:47:01,289 [ scc.git] DEBUG Calling 'git remote'
2024-12-06 00:47:01,295 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-06 00:47:01,296 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2024-12-06 00:47:01,296 [ scc.git] DEBUG Calling 'git remote'
2024-12-06 00:47:01,302 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-06 00:47:01,302 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2024-12-06 00:47:01,302 [ scc.git] DEBUG Calling 'git remote'
2024-12-06 00:47:01,308 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-06 00:47:01,308 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2024-12-06 00:47:01,308 [ scc.git] DEBUG Calling 'git remote'
2024-12-06 00:47:01,315 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-06 00:47:01,316 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2024-12-06 00:47:01,316 [ scc.git] DEBUG Calling 'git remote'
2024-12-06 00:47:01,323 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-06 00:47:01,323 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2024-12-06 00:47:01,323 [ scc.git] DEBUG Calling 'git remote'
2024-12-06 00:47:01,329 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-06 00:47:01,330 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2024-12-06 00:47:01,330 [ scc.git] DEBUG Calling 'git remote'
2024-12-06 00:47:01,336 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-06 00:47:01,336 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2024-12-06 00:47:01,337 [ scc.git] DEBUG Calling 'git remote'
2024-12-06 00:47:01,343 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-06 00:47:01,344 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2024-12-06 00:47:01,344 [ scc.git] DEBUG Calling 'git remote'
2024-12-06 00:47:01,350 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-06 00:47:01,350 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2024-12-06 00:47:01,350 [ scc.git] DEBUG Calling 'git remote'
2024-12-06 00:47:01,357 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-12-06 00:47:01,357 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2024-12-06 00:47:01,357 [ scc.git] DEBUG Calling 'git remote'
2024-12-06 00:47:01,363 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
Update component versions
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
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WARNING: The wheel package is not available.
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/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
Updating omero-gateway from 5.10.0 to 5.10.1-SNAPSHOT
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Commit all component version changes
Entering 'minimal-omero-client'
Entering 'omero-cli-duplicate'
Entering 'omero-cli-render'
Entering 'omero-cli-zarr'
Entering 'omero-figure'
Entering 'omero-fpbioimage'
Entering 'omero-gallery'
Entering 'omero-iviewer'
Entering 'omero-mapr'
Entering 'omero-metadata'
Entering 'omero-parade'
Entering 'omero-prometheus-tools'
Entering 'omero-rois'
Entering 'omero-signup'
Entering 'omero-test-infra'
Entering 'omero-upload'
Entering 'omero-virtual-microscope'
Entering 'omero-web-zarr'
Entering 'omero-weberror'
Entering 'omero-webtest'
Entering 'rOMERO-gateway'
Entering 'scripts'
Entering 'minimal-omero-client'
[detached HEAD 7630089] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Entering 'omero-cli-duplicate'
HEAD detached from 027b3e6
nothing to commit, working tree clean
Entering 'omero-cli-render'
HEAD detached from ce6e13c
nothing to commit, working tree clean
Entering 'omero-cli-zarr'
HEAD detached from 9b73dd9
Untracked files:
(use "git add <file>..." to include in what will be committed)
.eggs/
nothing added to commit but untracked files present (use "git add" to track)
Entering 'omero-figure'
HEAD detached from 1dfb1389
nothing to commit, working tree clean
Entering 'omero-fpbioimage'
HEAD detached from e5b3ca3
nothing to commit, working tree clean
Entering 'omero-gallery'
HEAD detached from 2a621da
nothing to commit, working tree clean
Entering 'omero-iviewer'
HEAD detached from b4102d4
nothing to commit, working tree clean
Entering 'omero-mapr'
HEAD detached from 0a557da
nothing to commit, working tree clean
Entering 'omero-metadata'
HEAD detached from fc20959
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Entering 'omero-parade'
HEAD detached from 5d441c2
nothing to commit, working tree clean
Entering 'omero-prometheus-tools'
HEAD detached from 18bccb6
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Entering 'omero-rois'
HEAD detached from 5c752d5
nothing to commit, working tree clean
Entering 'omero-signup'
HEAD detached from c8610db
nothing to commit, working tree clean
Entering 'omero-test-infra'
HEAD detached from cda3ec6
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Entering 'omero-upload'
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Entering 'omero-virtual-microscope'
HEAD detached from deab817
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Entering 'omero-web-zarr'
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Entering 'omero-weberror'
HEAD detached from adfa132
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Entering 'omero-webtest'
HEAD detached from 8da48e1
nothing to commit, working tree clean
Entering 'rOMERO-gateway'
HEAD detached from 7b5d64d
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Entering 'scripts'
HEAD detached from 312afbe
nothing to commit, working tree clean
[detached HEAD 58cc9cb] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2024-12-06 00:47:48,078 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2024-12-06 00:47:57,053 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2024-12-06 00:47:59,367 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2024-12-06 00:48:03,852 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2024-12-06 00:48:44,184 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci
[Pipeline] archiveArtifacts
Archiving artifacts
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS
![[Jenkins]](/jenkins/static/28c89a1b/images/svgs/logo.svg){kind=logo}
