Skipping 225 KB..
Full LogTestTestTestTestTestTestTestTestTestTestTestTestTest
2025-08-14 00:47:26,612 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:26,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d HTTP/1.1" 200 None
2025-08-14 00:47:27,181 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:27,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2
2025-08-14 00:47:27,393 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-14 00:47:27,644 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:27,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None
2025-08-14 00:47:28,154 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:28,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None
2025-08-14 00:47:28,677 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:28,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2025-08-14 00:47:29,230 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:29,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-14 00:47:29,713 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:30,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2025-08-14 00:47:30,297 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:30,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2
2025-08-14 00:47:30,497 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient'
2025-08-14 00:47:30,497 [ scc.repo] DEBUG ## Branches found:
2025-08-14 00:47:30,497 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2025-08-14 00:47:30,497 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:47:30,498 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:47:30,500 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-14 00:47:30,503 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-14 00:47:30,503 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-14 00:47:30,506 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-14 00:47:30,509 [ scc.git] DEBUG Already up to date.
2025-08-14 00:47:30,509 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head'
2025-08-14 00:47:30,796 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2025-08-14 00:47:30,796 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD
2025-08-14 00:47:30,800 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head'
2025-08-14 00:47:31,072 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2025-08-14 00:47:31,073 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD
2025-08-14 00:47:31,077 [ scc.git] DEBUG ## Unique users: []
2025-08-14 00:47:31,077 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:47:31,077 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:47:31,079 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322'
2025-08-14 00:47:31,084 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:47:31,086 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322'
2025-08-14 00:47:31,096 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-14 00:47:31,100 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++
2025-08-14 00:47:31,100 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 ---------------------
2025-08-14 00:47:31,100 [ scc.git] DEBUG requirements.txt | 2 +-
2025-08-14 00:47:31,100 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-)
2025-08-14 00:47:31,100 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html
2025-08-14 00:47:31,100 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html
2025-08-14 00:47:31,101 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:31,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:47:31,291 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d'
2025-08-14 00:47:31,295 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:47:31,297 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d'
2025-08-14 00:47:31,307 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-14 00:47:31,310 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-08-14 00:47:31,310 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-08-14 00:47:31,542 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:31,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:47:31,728 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-14 00:47:31,770 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:47:31,770 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:47:31,773 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-14 00:47:31,813 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-14 00:47:31,818 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9c6667f390> has no local changes
2025-08-14 00:47:31,818 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
- PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Generated by OMERO-plugins-push#503 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/503/)'
2025-08-14 00:47:31,825 [ scc.git] DEBUG [detached HEAD 15e972b] merge master -Dorg -Ssuccess-only
2025-08-14 00:47:31,825 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-14 00:47:31,825 [ scc.repo] DEBUG ## PRs found:
2025-08-14 00:47:31,979 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:32,284 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None
2025-08-14 00:47:32,536 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:32,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None
2025-08-14 00:47:33,017 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:33,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None
2025-08-14 00:47:33,514 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:33,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2025-08-14 00:47:34,078 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:34,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-14 00:47:34,603 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:34,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2025-08-14 00:47:35,161 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:35,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2
2025-08-14 00:47:35,359 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2025-08-14 00:47:35,610 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:35,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None
2025-08-14 00:47:36,123 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:36,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None
2025-08-14 00:47:36,681 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:36,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2025-08-14 00:47:37,248 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:37,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-14 00:47:37,758 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:38,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2025-08-14 00:47:38,322 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:38,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2
2025-08-14 00:47:38,533 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2025-08-14 00:47:38,533 [ scc.repo] DEBUG ## Branches found:
2025-08-14 00:47:38,533 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2025-08-14 00:47:38,533 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:47:38,533 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:47:38,537 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-14 00:47:38,539 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-14 00:47:38,539 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-14 00:47:38,542 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-14 00:47:38,550 [ scc.git] DEBUG Updating 3cd120c..55060a2
2025-08-14 00:47:38,784 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:39,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None
2025-08-14 00:47:39,195 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head'
2025-08-14 00:47:39,476 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2025-08-14 00:47:39,476 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD
2025-08-14 00:47:39,480 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head'
2025-08-14 00:47:39,768 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2025-08-14 00:47:39,768 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD
2025-08-14 00:47:39,772 [ scc.git] DEBUG ## Unique users: []
2025-08-14 00:47:39,772 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:47:39,772 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:47:39,775 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-08-14 00:47:39,780 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:47:39,782 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-08-14 00:47:39,795 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py
2025-08-14 00:47:39,796 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py
2025-08-14 00:47:39,796 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2025-08-14 00:47:39,796 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2025-08-14 00:47:39,796 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-14 00:47:39,796 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-14 00:47:39,799 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501'
2025-08-14 00:47:39,803 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2025-08-14 00:47:39,805 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:40,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:47:40,001 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2025-08-14 00:47:40,006 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501'
2025-08-14 00:47:40,009 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
Conflicting PR. Removed from build [OMERO-plugins-push#503](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/503/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/503/consoleText) for more details.
Possible conflicts:
- Upstream changes
- src/omero_metadata/populate.py
- src/omero_metadata/cli.py
--conflicts
2025-08-14 00:47:40,011 [ scc.config] DEBUG Found github.token
2025-08-14 00:47:40,011 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts.
2025-08-14 00:47:40,011 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7'
2025-08-14 00:47:40,016 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:47:40,018 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7'
2025-08-14 00:47:40,032 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2025-08-14 00:47:40,032 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2025-08-14 00:47:40,033 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py
2025-08-14 00:47:40,033 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-14 00:47:40,033 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-14 00:47:40,036 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501'
2025-08-14 00:47:40,041 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action
2025-08-14 00:47:40,252 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:40,451 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:47:40,452 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7'
2025-08-14 00:47:40,456 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501'
2025-08-14 00:47:40,459 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
Conflicting PR. Removed from build [OMERO-plugins-push#503](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/503/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/503/consoleText) for more details.
Possible conflicts:
- PR #55 kkoz 'Prevent users from creating columns with python keyword names'
- src/omero_metadata/populate.py
- Upstream changes
- src/omero_metadata/populate.py
--conflicts
2025-08-14 00:47:40,461 [ scc.config] DEBUG Found github.token
2025-08-14 00:47:40,461 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts.
2025-08-14 00:47:40,462 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-14 00:47:40,504 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:47:40,504 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:47:40,506 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-14 00:47:40,547 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-14 00:47:40,551 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9c636325d0> has no local changes
2025-08-14 00:47:40,551 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-metadata
Updating 3cd120c..55060a2
Previously merged:
- PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Generated by OMERO-plugins-push#503 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/503/)'
2025-08-14 00:47:40,559 [ scc.git] DEBUG [detached HEAD d72ea4f] merge master -Dorg -Ssuccess-only
2025-08-14 00:47:40,559 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-14 00:47:40,559 [ scc.repo] DEBUG ## PRs found:
2025-08-14 00:47:40,703 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:41,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None
2025-08-14 00:47:41,335 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:41,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None
2025-08-14 00:47:41,846 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:42,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None
2025-08-14 00:47:42,413 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:42,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-14 00:47:42,986 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:43,271 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-14 00:47:43,523 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:43,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0 HTTP/1.1" 200 None
2025-08-14 00:47:44,060 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:44,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2
2025-08-14 00:47:44,257 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-14 00:47:44,508 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:44,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None
2025-08-14 00:47:44,825 [ scc.repo] DEBUG # ... Include label: dependencies
2025-08-14 00:47:45,077 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:45,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None
2025-08-14 00:47:45,687 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:46,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-14 00:47:46,291 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:46,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-14 00:47:46,826 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:47,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80 HTTP/1.1" 200 None
2025-08-14 00:47:47,420 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:47,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2
2025-08-14 00:47:47,641 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
2025-08-14 00:47:47,892 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:48,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None
2025-08-14 00:47:48,133 [ scc.repo] DEBUG # ... Include label: dependencies
2025-08-14 00:47:48,384 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:48,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None
2025-08-14 00:47:48,960 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:49,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-14 00:47:49,483 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:49,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-14 00:47:50,003 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:50,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0 HTTP/1.1" 200 None
2025-08-14 00:47:50,579 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:50,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2
2025-08-14 00:47:50,788 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
2025-08-14 00:47:51,040 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:51,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None
2025-08-14 00:47:51,700 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:51,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None
2025-08-14 00:47:52,212 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:52,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None
2025-08-14 00:47:52,736 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:53,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None
2025-08-14 00:47:53,263 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:53,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None
2025-08-14 00:47:53,754 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:54,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None
2025-08-14 00:47:54,262 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:54,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None
2025-08-14 00:47:54,526 [ scc.repo] DEBUG ## Branches found:
2025-08-14 00:47:54,527 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2025-08-14 00:47:54,527 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:47:54,527 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:47:54,530 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-14 00:47:54,532 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-14 00:47:54,532 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-14 00:47:54,535 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-14 00:47:54,538 [ scc.git] DEBUG Already up to date.
2025-08-14 00:47:54,538 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head'
2025-08-14 00:47:54,817 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-08-14 00:47:54,817 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD
2025-08-14 00:47:54,821 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head'
2025-08-14 00:47:55,094 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-08-14 00:47:55,094 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD
2025-08-14 00:47:55,099 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head'
2025-08-14 00:47:55,375 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2025-08-14 00:47:55,376 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD
2025-08-14 00:47:55,380 [ scc.git] DEBUG ## Unique users: []
2025-08-14 00:47:55,380 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:47:55,380 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:47:55,382 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0'
2025-08-14 00:47:55,385 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:47:55,387 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0'
2025-08-14 00:47:55,396 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-14 00:47:55,399 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++----------------------------
2025-08-14 00:47:55,399 [ scc.git] DEBUG package.json | 2 +-
2025-08-14 00:47:55,399 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-)
2025-08-14 00:47:55,401 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:55,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:47:55,587 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80'
2025-08-14 00:47:55,590 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:47:55,592 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80'
2025-08-14 00:47:55,602 [ scc.git] DEBUG Auto-merging package-lock.json
2025-08-14 00:47:55,602 [ scc.git] DEBUG Auto-merging package.json
2025-08-14 00:47:55,603 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-14 00:47:55,607 [ scc.git] DEBUG package-lock.json | 18 ++++++++++--------
2025-08-14 00:47:55,607 [ scc.git] DEBUG package.json | 2 +-
2025-08-14 00:47:55,607 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-)
2025-08-14 00:47:55,837 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:56,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:47:56,027 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0'
2025-08-14 00:47:56,030 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:47:56,032 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0'
2025-08-14 00:47:56,041 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-14 00:47:56,044 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +-
2025-08-14 00:47:56,044 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-)
2025-08-14 00:47:56,278 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:56,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:47:56,454 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-14 00:47:56,497 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:47:56,497 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:47:56,499 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-14 00:47:56,540 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-14 00:47:56,544 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9c64fd1a90> has no local changes
2025-08-14 00:47:56,544 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-parade
Excluded PRs:
- PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
- PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
- PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Generated by OMERO-plugins-push#503 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/503/)'
2025-08-14 00:47:56,551 [ scc.git] DEBUG [detached HEAD 1dbfd55] merge master -Dorg -Ssuccess-only
2025-08-14 00:47:56,552 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-14 00:47:56,552 [ scc.repo] DEBUG ## PRs found:
2025-08-14 00:47:56,705 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:56,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 2
2025-08-14 00:47:56,911 [ scc.repo] DEBUG ## Branches found:
2025-08-14 00:47:56,911 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2025-08-14 00:47:56,911 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:47:56,911 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:47:56,913 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-14 00:47:56,916 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-14 00:47:56,916 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-14 00:47:56,919 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-14 00:47:56,922 [ scc.git] DEBUG Already up to date.
2025-08-14 00:47:56,922 [ scc.git] DEBUG ## Unique users: []
2025-08-14 00:47:56,922 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:47:56,922 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:47:56,925 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-14 00:47:56,965 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:47:56,965 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:47:56,968 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-14 00:47:57,009 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-14 00:47:57,012 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9c63634410> has no local changes
2025-08-14 00:47:57,013 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-prometheus-tools
Already up to date.
Generated by OMERO-plugins-push#503 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/503/)'
2025-08-14 00:47:57,019 [ scc.git] DEBUG [detached HEAD 388b347] merge master -Dorg -Ssuccess-only
2025-08-14 00:47:57,019 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-14 00:47:57,019 [ scc.repo] DEBUG ## PRs found:
2025-08-14 00:47:57,162 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:57,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None
2025-08-14 00:47:57,731 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:58,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33 HTTP/1.1" 200 None
2025-08-14 00:47:58,253 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:58,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/33/comments HTTP/1.1" 200 None
2025-08-14 00:47:58,775 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:59,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None
2025-08-14 00:47:59,332 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:47:59,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-14 00:47:59,859 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:00,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-14 00:48:00,377 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:00,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None
2025-08-14 00:48:00,976 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:01,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/1122baea98746effd4eb59deed25870f673ce3d3?per_page=1 HTTP/1.1" 200 None
2025-08-14 00:48:01,457 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:01,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3 HTTP/1.1" 200 None
2025-08-14 00:48:02,019 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:02,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/1122baea98746effd4eb59deed25870f673ce3d3/status HTTP/1.1" 200 None
2025-08-14 00:48:02,226 [ scc.repo] DEBUG - PR 33 jo-mueller 'Add roi to array functions'
2025-08-14 00:48:02,477 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:02,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None
2025-08-14 00:48:02,750 [ scc.repo] DEBUG ## Branches found:
2025-08-14 00:48:02,750 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2025-08-14 00:48:02,750 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:48:02,751 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:48:02,753 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-14 00:48:02,756 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-14 00:48:02,756 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-14 00:48:02,759 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-14 00:48:02,762 [ scc.git] DEBUG Already up to date.
2025-08-14 00:48:02,762 [ scc.git] DEBUG Calling 'git fetch origin pull/33/head'
2025-08-14 00:48:03,037 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2025-08-14 00:48:03,037 [ scc.git] DEBUG * branch refs/pull/33/head -> FETCH_HEAD
2025-08-14 00:48:03,041 [ scc.git] DEBUG ## Unique users: []
2025-08-14 00:48:03,041 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:48:03,041 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:48:03,044 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1122baea98746effd4eb59deed25870f673ce3d3'
2025-08-14 00:48:03,047 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:48:03,050 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 33 (Add roi to array functions) 1122baea98746effd4eb59deed25870f673ce3d3'
2025-08-14 00:48:03,058 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-14 00:48:03,062 [ scc.git] DEBUG setup.py | 4 +-
2025-08-14 00:48:03,062 [ scc.git] DEBUG src/omero_rois/__init__.py | 4 +
2025-08-14 00:48:03,062 [ scc.git] DEBUG src/omero_rois/library.py | 204 +++++++++++++++++++++++++++++++++++++++++++--
2025-08-14 00:48:03,062 [ scc.git] DEBUG 3 files changed, 203 insertions(+), 9 deletions(-)
2025-08-14 00:48:03,063 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:03,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:48:03,256 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-14 00:48:03,297 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:48:03,297 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:48:03,299 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-14 00:48:03,338 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-14 00:48:03,342 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9c64842b50> has no local changes
2025-08-14 00:48:03,342 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-rois
Excluded PRs:
- PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 33 jo-mueller 'Add roi to array functions'
Generated by OMERO-plugins-push#503 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/503/)'
2025-08-14 00:48:03,348 [ scc.git] DEBUG [detached HEAD 334f96a] merge master -Dorg -Ssuccess-only
2025-08-14 00:48:03,349 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-14 00:48:03,349 [ scc.repo] DEBUG ## PRs found:
2025-08-14 00:48:03,507 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:03,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None
2025-08-14 00:48:04,088 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:04,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None
2025-08-14 00:48:04,632 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:04,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None
2025-08-14 00:48:05,109 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:05,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2025-08-14 00:48:05,768 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:06,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-14 00:48:06,284 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:06,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2025-08-14 00:48:06,889 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:07,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2
2025-08-14 00:48:07,100 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)'
2025-08-14 00:48:07,101 [ scc.repo] DEBUG ## Branches found:
2025-08-14 00:48:07,101 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2025-08-14 00:48:07,101 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:48:07,101 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:48:07,104 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-14 00:48:07,106 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-14 00:48:07,106 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-14 00:48:07,109 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-14 00:48:07,113 [ scc.git] DEBUG Already up to date.
2025-08-14 00:48:07,113 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2025-08-14 00:48:07,395 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2025-08-14 00:48:07,395 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2025-08-14 00:48:07,399 [ scc.git] DEBUG ## Unique users: []
2025-08-14 00:48:07,399 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:48:07,399 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:48:07,402 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-08-14 00:48:07,405 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:48:07,408 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-08-14 00:48:07,417 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py
2025-08-14 00:48:07,417 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py
2025-08-14 00:48:07,417 [ scc.git] DEBUG Auto-merging omero_signup/urls.py
2025-08-14 00:48:07,417 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py
2025-08-14 00:48:07,417 [ scc.git] DEBUG Auto-merging omero_signup/views.py
2025-08-14 00:48:07,417 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py
2025-08-14 00:48:07,417 [ scc.git] DEBUG Auto-merging setup.py
2025-08-14 00:48:07,417 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py
2025-08-14 00:48:07,418 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-14 00:48:07,418 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-14 00:48:07,421 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e'
2025-08-14 00:48:07,425 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build
2025-08-14 00:48:07,426 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:07,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:48:07,613 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2025-08-14 00:48:07,617 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e'
2025-08-14 00:48:07,620 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
Conflicting PR. Removed from build [OMERO-plugins-push#503](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/503/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/503/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_signup/views.py
- omero_signup/urls.py
- omero_signup/signup_settings.py
- setup.py
--conflicts
2025-08-14 00:48:07,622 [ scc.config] DEBUG Found github.token
2025-08-14 00:48:07,622 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts.
2025-08-14 00:48:07,622 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-14 00:48:07,664 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:48:07,664 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:48:07,667 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-14 00:48:07,707 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-14 00:48:07,710 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9c64841950> has no local changes
2025-08-14 00:48:07,711 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-signup
Already up to date.
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Generated by OMERO-plugins-push#503 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/503/)'
2025-08-14 00:48:07,717 [ scc.git] DEBUG [detached HEAD a971991] merge master -Dorg -Ssuccess-only
2025-08-14 00:48:07,718 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-14 00:48:07,718 [ scc.repo] DEBUG ## PRs found:
2025-08-14 00:48:07,864 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:08,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None
2025-08-14 00:48:08,449 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:08,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/76 HTTP/1.1" 200 None
2025-08-14 00:48:08,971 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:09,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None
2025-08-14 00:48:09,539 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:09,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-14 00:48:10,071 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:10,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-14 00:48:10,623 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:10,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6 HTTP/1.1" 200 None
2025-08-14 00:48:11,229 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:11,444 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6?per_page=1 HTTP/1.1" 200 2
2025-08-14 00:48:11,445 [ scc.repo] DEBUG - PR 76 will-moore 'Run cli deps'
2025-08-14 00:48:11,696 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:11,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None
2025-08-14 00:48:12,221 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:12,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None
2025-08-14 00:48:12,772 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:13,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623 HTTP/1.1" 200 None
2025-08-14 00:48:13,321 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:13,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-14 00:48:13,899 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:14,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-14 00:48:14,452 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:14,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73 HTTP/1.1" 200 None
2025-08-14 00:48:14,978 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:15,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/73/comments HTTP/1.1" 200 None
2025-08-14 00:48:15,581 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:15,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None
2025-08-14 00:48:16,077 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:16,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None
2025-08-14 00:48:16,582 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:16,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2025-08-14 00:48:17,142 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:17,379 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-14 00:48:17,630 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:17,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2025-08-14 00:48:18,134 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:18,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2
2025-08-14 00:48:18,335 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2025-08-14 00:48:18,335 [ scc.repo] DEBUG ## Branches found:
2025-08-14 00:48:18,335 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2025-08-14 00:48:18,335 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:48:18,335 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:48:18,338 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-14 00:48:18,341 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-14 00:48:18,341 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-14 00:48:18,344 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-14 00:48:18,347 [ scc.git] DEBUG Already up to date.
2025-08-14 00:48:18,347 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head'
2025-08-14 00:48:18,641 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2025-08-14 00:48:18,641 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD
2025-08-14 00:48:18,645 [ scc.git] DEBUG Calling 'git fetch origin pull/76/head'
2025-08-14 00:48:18,929 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2025-08-14 00:48:18,929 [ scc.git] DEBUG * branch refs/pull/76/head -> FETCH_HEAD
2025-08-14 00:48:18,933 [ scc.git] DEBUG ## Unique users: []
2025-08-14 00:48:18,933 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:48:18,933 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:48:18,936 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928'
2025-08-14 00:48:18,940 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:48:18,942 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928'
2025-08-14 00:48:18,955 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-14 00:48:18,959 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++
2025-08-14 00:48:18,959 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++
2025-08-14 00:48:18,959 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++
2025-08-14 00:48:18,959 [ scc.git] DEBUG idr/70-reset-password.sh | 1 +
2025-08-14 00:48:18,959 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 +
2025-08-14 00:48:18,960 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 +
2025-08-14 00:48:18,960 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++
2025-08-14 00:48:18,960 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++
2025-08-14 00:48:18,960 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++
2025-08-14 00:48:18,961 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:18,961 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++
2025-08-14 00:48:18,961 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++
2025-08-14 00:48:18,961 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++
2025-08-14 00:48:18,961 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++
2025-08-14 00:48:18,961 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++
2025-08-14 00:48:18,961 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++
2025-08-14 00:48:18,961 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++
2025-08-14 00:48:18,961 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++
2025-08-14 00:48:18,961 [ scc.git] DEBUG idr/omero/Dockerfile | 3 +
2025-08-14 00:48:18,961 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++
2025-08-14 00:48:18,961 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++
2025-08-14 00:48:18,961 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++
2025-08-14 00:48:18,961 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++
2025-08-14 00:48:18,961 [ scc.git] DEBUG 22 files changed, 824 insertions(+)
2025-08-14 00:48:18,961 [ scc.git] DEBUG create mode 100644 idr-compose.yml
2025-08-14 00:48:18,961 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml
2025-08-14 00:48:18,961 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh
2025-08-14 00:48:18,961 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh
2025-08-14 00:48:18,961 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf
2025-08-14 00:48:18,961 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf
2025-08-14 00:48:18,961 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf
2025-08-14 00:48:18,962 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf
2025-08-14 00:48:18,962 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf
2025-08-14 00:48:18,962 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf
2025-08-14 00:48:18,962 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf
2025-08-14 00:48:18,962 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf
2025-08-14 00:48:18,962 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf
2025-08-14 00:48:18,962 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf
2025-08-14 00:48:18,962 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf
2025-08-14 00:48:18,962 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf
2025-08-14 00:48:18,962 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf
2025-08-14 00:48:18,962 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile
2025-08-14 00:48:18,962 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml
2025-08-14 00:48:18,962 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile
2025-08-14 00:48:18,962 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile
2025-08-14 00:48:18,962 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml
2025-08-14 00:48:19,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:48:19,177 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6'
2025-08-14 00:48:19,181 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:48:19,183 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 76 (Run cli deps) bd0bdd4d987dbcec28e1780f65ad3bbbe18d1aa6'
2025-08-14 00:48:19,195 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-14 00:48:19,199 [ scc.git] DEBUG docker | 1 +
2025-08-14 00:48:19,199 [ scc.git] DEBUG 1 file changed, 1 insertion(+)
2025-08-14 00:48:19,427 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:19,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:48:19,621 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-14 00:48:19,663 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:48:19,664 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:48:19,666 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-14 00:48:19,706 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-14 00:48:19,709 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9c64741a90> has no local changes
2025-08-14 00:48:19,709 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-test-infra
Excluded PRs:
- PR 75 marimeireles 'Microservices' (user: marimeireles)
- PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
- PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
- PR 76 will-moore 'Run cli deps'
Generated by OMERO-plugins-push#503 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/503/)'
2025-08-14 00:48:19,716 [ scc.git] DEBUG [detached HEAD 435541a] merge master -Dorg -Ssuccess-only
2025-08-14 00:48:19,716 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-14 00:48:19,716 [ scc.repo] DEBUG ## PRs found:
2025-08-14 00:48:19,872 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:20,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2
2025-08-14 00:48:20,105 [ scc.repo] DEBUG ## Branches found:
2025-08-14 00:48:20,106 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2025-08-14 00:48:20,106 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:48:20,106 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:48:20,108 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-14 00:48:20,110 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-14 00:48:20,111 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-14 00:48:20,113 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-14 00:48:20,116 [ scc.git] DEBUG Already up to date.
2025-08-14 00:48:20,117 [ scc.git] DEBUG ## Unique users: []
2025-08-14 00:48:20,117 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:48:20,117 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:48:20,119 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-14 00:48:20,162 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:48:20,162 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:48:20,164 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-14 00:48:20,205 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-14 00:48:20,208 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9c636a41d0> has no local changes
2025-08-14 00:48:20,208 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-upload
Already up to date.
Generated by OMERO-plugins-push#503 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/503/)'
2025-08-14 00:48:20,214 [ scc.git] DEBUG [detached HEAD c4b6ca9] merge master -Dorg -Ssuccess-only
2025-08-14 00:48:20,214 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-14 00:48:20,214 [ scc.repo] DEBUG ## PRs found:
2025-08-14 00:48:20,357 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:20,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2
2025-08-14 00:48:20,575 [ scc.repo] DEBUG ## Branches found:
2025-08-14 00:48:20,575 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2025-08-14 00:48:20,575 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:48:20,575 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:48:20,578 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-14 00:48:20,580 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-14 00:48:20,580 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-14 00:48:20,583 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-14 00:48:20,591 [ scc.git] DEBUG Updating deab817..160d894
2025-08-14 00:48:20,826 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:21,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None
2025-08-14 00:48:21,350 [ scc.git] DEBUG ## Unique users: []
2025-08-14 00:48:21,351 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:48:21,351 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:48:21,353 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-14 00:48:21,396 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:48:21,396 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:48:21,399 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-14 00:48:21,440 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-14 00:48:21,443 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9c64741ad0> has no local changes
2025-08-14 00:48:21,443 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-virtual-microscope
Updating deab817..160d894
Previously merged:
- PR 20 jburel 'Build'
Generated by OMERO-plugins-push#503 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/503/)'
2025-08-14 00:48:21,449 [ scc.git] DEBUG [detached HEAD 02ed288] merge master -Dorg -Ssuccess-only
2025-08-14 00:48:21,450 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-14 00:48:21,450 [ scc.git] INFO Overriding base-branch from master to main
2025-08-14 00:48:21,450 [ scc.repo] DEBUG ## PRs found:
2025-08-14 00:48:21,601 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:21,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None
2025-08-14 00:48:22,158 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:22,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18 HTTP/1.1" 200 None
2025-08-14 00:48:22,666 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:22,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/18/comments HTTP/1.1" 200 None
2025-08-14 00:48:23,158 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:23,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec HTTP/1.1" 200 None
2025-08-14 00:48:23,726 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:24,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-14 00:48:24,276 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:24,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/fec20a6fff48522621889a53c632b0cd439e57ec/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-14 00:48:24,796 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:25,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None
2025-08-14 00:48:25,312 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:25,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None
2025-08-14 00:48:25,845 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:26,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None
2025-08-14 00:48:26,371 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:26,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2025-08-14 00:48:26,918 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:27,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-14 00:48:27,413 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:27,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2025-08-14 00:48:27,904 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:28,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2
2025-08-14 00:48:28,118 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2025-08-14 00:48:28,118 [ scc.repo] DEBUG ## Branches found:
2025-08-14 00:48:28,118 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2025-08-14 00:48:28,118 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:48:28,118 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:48:28,121 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main'
2025-08-14 00:48:28,123 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-14 00:48:28,123 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main'
2025-08-14 00:48:28,127 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main'
2025-08-14 00:48:28,130 [ scc.git] DEBUG Already up to date.
2025-08-14 00:48:28,130 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head'
2025-08-14 00:48:28,406 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2025-08-14 00:48:28,406 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD
2025-08-14 00:48:28,410 [ scc.git] DEBUG ## Unique users: []
2025-08-14 00:48:28,410 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:48:28,410 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:48:28,412 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-08-14 00:48:28,415 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:48:28,418 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-08-14 00:48:28,425 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py
2025-08-14 00:48:28,425 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py
2025-08-14 00:48:28,426 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-14 00:48:28,426 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-14 00:48:28,429 [ scc.git] DEBUG Calling 'git reset --hard 8f3c31388de8a7c44f18a6f0e20ea41d35fae041'
2025-08-14 00:48:28,433 [ scc.git] DEBUG HEAD is now at 8f3c313 Merge pull request #17 from jburel/build
2025-08-14 00:48:28,434 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:28,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:48:28,631 [ scc.git] DEBUG Calling 'git merge-base 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2025-08-14 00:48:28,634 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..8f3c31388de8a7c44f18a6f0e20ea41d35fae041'
2025-08-14 00:48:28,637 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Conflicting PR. Removed from build [OMERO-plugins-push#503](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/503/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/503/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_web_zarr/urls.py
--conflicts
2025-08-14 00:48:28,639 [ scc.config] DEBUG Found github.token
2025-08-14 00:48:28,640 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts.
2025-08-14 00:48:28,640 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-14 00:48:28,682 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:48:28,682 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:48:28,684 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-14 00:48:28,724 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-14 00:48:28,727 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9c63696c50> has no local changes
2025-08-14 00:48:28,727 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 18 will-moore 'Build' (status: failure)
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Generated by OMERO-plugins-push#503 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/503/)'
2025-08-14 00:48:28,734 [ scc.git] DEBUG [detached HEAD b2bf484] merge master -Dorg -Ssuccess-only
2025-08-14 00:48:28,734 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-14 00:48:28,735 [ scc.repo] DEBUG ## PRs found:
2025-08-14 00:48:28,882 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:29,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2
2025-08-14 00:48:29,103 [ scc.repo] DEBUG ## Branches found:
2025-08-14 00:48:29,103 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2025-08-14 00:48:29,103 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:48:29,103 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:48:29,105 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-14 00:48:29,108 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-14 00:48:29,108 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-14 00:48:29,111 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-14 00:48:29,114 [ scc.git] DEBUG Already up to date.
2025-08-14 00:48:29,114 [ scc.git] DEBUG ## Unique users: []
2025-08-14 00:48:29,114 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:48:29,114 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:48:29,116 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-14 00:48:29,157 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:48:29,157 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:48:29,159 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-14 00:48:29,199 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-14 00:48:29,202 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9c6365eed0> has no local changes
2025-08-14 00:48:29,202 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-weberror
Already up to date.
Generated by OMERO-plugins-push#503 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/503/)'
2025-08-14 00:48:29,208 [ scc.git] DEBUG [detached HEAD 3aa7907] merge master -Dorg -Ssuccess-only
2025-08-14 00:48:29,208 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-14 00:48:29,208 [ scc.repo] DEBUG ## PRs found:
2025-08-14 00:48:29,354 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:29,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2
2025-08-14 00:48:29,565 [ scc.repo] DEBUG ## Branches found:
2025-08-14 00:48:29,565 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2025-08-14 00:48:29,565 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:48:29,566 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:48:29,568 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-14 00:48:29,570 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-14 00:48:29,570 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-14 00:48:29,574 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-14 00:48:29,577 [ scc.git] DEBUG Already up to date.
2025-08-14 00:48:29,577 [ scc.git] DEBUG ## Unique users: []
2025-08-14 00:48:29,577 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:48:29,577 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:48:29,579 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-14 00:48:29,618 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:48:29,618 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:48:29,620 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-14 00:48:29,659 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-14 00:48:29,662 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9c63686a50> has no local changes
2025-08-14 00:48:29,662 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-webtest
Already up to date.
Generated by OMERO-plugins-push#503 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/503/)'
2025-08-14 00:48:29,668 [ scc.git] DEBUG [detached HEAD d72bc73] merge master -Dorg -Ssuccess-only
2025-08-14 00:48:29,669 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-14 00:48:29,669 [ scc.repo] DEBUG ## PRs found:
2025-08-14 00:48:29,816 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:30,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None
2025-08-14 00:48:30,349 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:30,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None
2025-08-14 00:48:30,885 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:31,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None
2025-08-14 00:48:31,367 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:31,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2025-08-14 00:48:31,918 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:32,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-14 00:48:32,409 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:32,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2025-08-14 00:48:32,962 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:33,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2
2025-08-14 00:48:33,164 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly'
2025-08-14 00:48:33,164 [ scc.repo] DEBUG ## Branches found:
2025-08-14 00:48:33,164 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2025-08-14 00:48:33,164 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:48:33,164 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:48:33,167 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2025-08-14 00:48:33,170 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-14 00:48:33,170 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2025-08-14 00:48:33,172 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2025-08-14 00:48:33,175 [ scc.git] DEBUG Already up to date.
2025-08-14 00:48:33,175 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head'
2025-08-14 00:48:33,461 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway
2025-08-14 00:48:33,461 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD
2025-08-14 00:48:33,466 [ scc.git] DEBUG ## Unique users: []
2025-08-14 00:48:33,466 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:48:33,466 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:48:33,468 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-08-14 00:48:33,471 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:48:33,474 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-08-14 00:48:33,483 [ scc.git] DEBUG Auto-merging Dockerfile
2025-08-14 00:48:33,483 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile
2025-08-14 00:48:33,483 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-14 00:48:33,483 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-14 00:48:33,486 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2025-08-14 00:48:33,491 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2025-08-14 00:48:33,492 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:33,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:48:33,681 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2025-08-14 00:48:33,684 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2025-08-14 00:48:33,687 [ scc.git] INFO - PR 100 dominikl 'Run tests properly'
Conflicting PR. Removed from build [OMERO-plugins-push#503](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/503/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/503/consoleText) for more details.
Possible conflicts:
- Upstream changes
- Dockerfile
--conflicts
2025-08-14 00:48:33,689 [ scc.config] DEBUG Found github.token
2025-08-14 00:48:33,689 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts.
2025-08-14 00:48:33,689 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-14 00:48:33,732 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:48:33,732 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:48:33,734 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-14 00:48:33,775 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-14 00:48:33,779 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9c64856b10> has no local changes
2025-08-14 00:48:33,779 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Generated by OMERO-plugins-push#503 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/503/)'
2025-08-14 00:48:33,786 [ scc.git] DEBUG [detached HEAD 47d344f] merge master -Dorg -Ssuccess-only
2025-08-14 00:48:33,786 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-14 00:48:33,786 [ scc.git] INFO Overriding base-branch from master to develop
2025-08-14 00:48:33,786 [ scc.repo] DEBUG ## PRs found:
2025-08-14 00:48:33,932 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:34,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2025-08-14 00:48:34,534 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:34,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None
2025-08-14 00:48:35,021 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:35,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None
2025-08-14 00:48:35,518 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:35,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-08-14 00:48:35,977 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:36,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-14 00:48:36,497 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:36,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None
2025-08-14 00:48:36,982 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:37,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None
2025-08-14 00:48:37,538 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:37,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2
2025-08-14 00:48:37,734 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-08-14 00:48:37,985 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:38,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2025-08-14 00:48:38,491 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:38,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2025-08-14 00:48:38,987 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:39,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-08-14 00:48:39,444 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:39,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2025-08-14 00:48:39,963 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:40,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2025-08-14 00:48:40,502 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:40,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2025-08-14 00:48:40,700 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-08-14 00:48:40,951 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:41,208 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2025-08-14 00:48:41,459 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:41,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2025-08-14 00:48:42,004 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:42,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2025-08-14 00:48:42,529 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:42,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2025-08-14 00:48:42,776 [ scc.repo] DEBUG ## Branches found:
2025-08-14 00:48:42,776 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2025-08-14 00:48:42,776 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:48:42,777 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:48:42,779 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2025-08-14 00:48:42,782 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2025-08-14 00:48:42,782 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2025-08-14 00:48:42,785 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2025-08-14 00:48:42,796 [ scc.git] DEBUG Updating 4b4c755..573db34
2025-08-14 00:48:43,027 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:43,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None
2025-08-14 00:48:43,684 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:44,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None
2025-08-14 00:48:44,114 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2025-08-14 00:48:44,414 [ scc.git] DEBUG From https://github.com/ome/scripts
2025-08-14 00:48:44,414 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2025-08-14 00:48:44,418 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head'
2025-08-14 00:48:44,702 [ scc.git] DEBUG From https://github.com/ome/scripts
2025-08-14 00:48:44,702 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD
2025-08-14 00:48:44,707 [ scc.git] DEBUG ## Unique users: []
2025-08-14 00:48:44,707 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:48:44,707 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:48:44,709 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-08-14 00:48:44,715 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:48:44,717 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-08-14 00:48:44,729 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree.
2025-08-14 00:48:44,729 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2025-08-14 00:48:44,729 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2025-08-14 00:48:44,732 [ scc.git] DEBUG Calling 'git reset --hard 573db340d5d1429fa17c7e486206948412a7c150'
2025-08-14 00:48:44,736 [ scc.git] DEBUG HEAD is now at 573db34 Bump version: 5.9.1 → 5.9.2.dev0
2025-08-14 00:48:44,737 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:44,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:48:44,925 [ scc.git] DEBUG Calling 'git merge-base 573db340d5d1429fa17c7e486206948412a7c150 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2025-08-14 00:48:44,930 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..573db340d5d1429fa17c7e486206948412a7c150'
2025-08-14 00:48:44,934 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-plugins-push#503](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/503/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/503/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2025-08-14 00:48:44,936 [ scc.config] DEBUG Found github.token
2025-08-14 00:48:44,937 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2025-08-14 00:48:44,937 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-08-14 00:48:44,941 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:48:44,943 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8'
2025-08-14 00:48:44,954 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2025-08-14 00:48:44,957 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++-
2025-08-14 00:48:44,958 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2025-08-14 00:48:45,176 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:45,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:48:45,375 [ scc.git] DEBUG Calling 'git submodule update'
2025-08-14 00:48:45,417 [ scc.git] DEBUG Get sha1 of %s
2025-08-14 00:48:45,417 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2025-08-14 00:48:45,419 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-14 00:48:45,460 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-14 00:48:45,463 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9c64843390> has no local changes
2025-08-14 00:48:45,463 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Updating 4b4c755..573db34
Previously merged:
- PR 227 jburel 'Replace tostring by tobytes'
- PR 225 will-moore 'Fix param names and assertion texts in tests'
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#503 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/503/)'
2025-08-14 00:48:45,470 [ scc.git] DEBUG [detached HEAD 7bcb6d0] merge master -Dorg -Ssuccess-only
2025-08-14 00:48:45,470 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-14 00:48:45,470 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2025-08-14 00:48:45,549 [ scc.config] DEBUG Found submodule.minimal-omero-client.url
2025-08-14 00:48:45,626 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:45,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:48:45,830 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch
2025-08-14 00:48:45,832 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url
2025-08-14 00:48:46,076 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:46,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:48:46,295 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch
2025-08-14 00:48:46,297 [ scc.config] DEBUG Found submodule.omero-cli-render.url
2025-08-14 00:48:46,542 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:46,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:48:46,754 [ scc.config] DEBUG Found submodule.omero-cli-render.branch
2025-08-14 00:48:46,756 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url
2025-08-14 00:48:47,001 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:47,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:48:47,185 [ scc.config] DEBUG Found submodule.omero-figure.url
2025-08-14 00:48:47,430 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:47,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:48:47,608 [ scc.config] DEBUG Found submodule.omero-figure.branch
2025-08-14 00:48:47,610 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url
2025-08-14 00:48:47,855 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:48,045 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:48:48,051 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch
2025-08-14 00:48:48,053 [ scc.config] DEBUG Found submodule.omero-gallery.url
2025-08-14 00:48:48,297 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:48,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:48:48,483 [ scc.config] DEBUG Found submodule.omero-gallery.branch
2025-08-14 00:48:48,485 [ scc.config] DEBUG Found submodule.omero-iviewer.url
2025-08-14 00:48:48,729 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:48,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:48:48,921 [ scc.config] DEBUG Found submodule.omero-iviewer.branch
2025-08-14 00:48:48,924 [ scc.config] DEBUG Found submodule.omero-mapr.url
2025-08-14 00:48:49,168 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:49,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:48:49,364 [ scc.config] DEBUG Found submodule.omero-mapr.branch
2025-08-14 00:48:49,367 [ scc.config] DEBUG Found submodule.omero-metadata.url
2025-08-14 00:48:49,611 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:49,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:48:49,822 [ scc.config] DEBUG Found submodule.omero-metadata.branch
2025-08-14 00:48:49,824 [ scc.config] DEBUG Found submodule.omero-parade.url
2025-08-14 00:48:50,068 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:50,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:48:50,264 [ scc.config] DEBUG Found submodule.omero-parade.branch
2025-08-14 00:48:50,266 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url
2025-08-14 00:48:50,511 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:50,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:48:50,689 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch
2025-08-14 00:48:50,691 [ scc.config] DEBUG Found submodule.omero-rois.url
2025-08-14 00:48:50,936 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:51,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:48:51,177 [ scc.config] DEBUG Found submodule.omero-signup.url
2025-08-14 00:48:51,421 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:51,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:48:51,619 [ scc.config] DEBUG Found submodule.omero-test-infra.url
2025-08-14 00:48:51,863 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:52,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:48:52,065 [ scc.config] DEBUG Found submodule.omero-test-infra.branch
2025-08-14 00:48:52,067 [ scc.config] DEBUG Found submodule.omero-upload.url
2025-08-14 00:48:52,312 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:52,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:48:52,504 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url
2025-08-14 00:48:52,749 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:52,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:48:52,941 [ scc.config] DEBUG Found submodule.omero-web-zarr.url
2025-08-14 00:48:53,185 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:53,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:48:53,387 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch
2025-08-14 00:48:53,389 [ scc.config] DEBUG Found submodule.omero-weberror.url
2025-08-14 00:48:53,634 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:53,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:48:53,827 [ scc.config] DEBUG Found submodule.omero-weberror.branch
2025-08-14 00:48:53,829 [ scc.config] DEBUG Found submodule.omero-webtest.url
2025-08-14 00:48:54,073 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:54,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:48:54,293 [ scc.config] DEBUG Found submodule.omero-webtest.branch
2025-08-14 00:48:54,295 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url
2025-08-14 00:48:54,540 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:54,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:48:54,740 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch
2025-08-14 00:48:54,742 [ scc.config] DEBUG Found submodule.scripts.url
2025-08-14 00:48:54,986 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2025-08-14 00:48:55,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2025-08-14 00:48:55,173 [ scc.config] DEBUG Found submodule.scripts.branch
2025-08-14 00:48:55,173 [ scc.git] DEBUG Calling 'git status --porcelain'
2025-08-14 00:48:55,266 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9c64838d50> has local changes
2025-08-14 00:48:55,266 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-plugins
Already up to date.
Merged PRs:
- PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
- PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
- PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
Repository: ome/minimal-omero-client
Already up to date.
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Already up to date.
Repository: ome/omero-cli-render
Excluded PRs:
- PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft)
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
Already up to date.
Merged PRs:
- PR 59 will-moore 'Apply settings to Plate'
- PR 69 dominikl 'Fix help text for impo/export commands'
- PR 71 dominikl 'Escape slash character in image names'
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 180 will-moore 'Register command' (status: failure)
- PR 174 will-moore 'Skip wells' (stage: draft)
- PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure)
- PR 170 will-moore 'Use ome zarr models py' (stage: draft)
- PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft)
- PR 167 dominikl 'Add extinfo command' (stage: draft)
- PR 166 will-moore 'Downsample scale option' (stage: draft)
- PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
Updating 11d3587..f7eea7c
Previously merged:
- PR 179 will-moore 'Changelog 0.6.0'
- PR 177 jburel 'Replace fromstring by frombuffer'
- PR 175 will-moore 'Pin ome-zarr-py <0.12.0'
- PR 147 will-moore 'Name option'
- PR 173 will-moore 'Add test_export_plate_polygons()'
- PR 171 will-moore 'Initial addition of integration tests'
- PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
Repository: ome/omero-figure
Excluded PRs:
- PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier)
- PR 619 will-moore 'OME-Zarr support' (stage: draft)
- PR 543 will-moore 'Plate well labels' (exclude comment)
Updating 9cc36cde..d2c6f5bc
Previously merged:
- PR 638 Rdornier 'Fix arrow opacity'
- PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
- PR 635 dependabot[bot] 'Bump esbuild and vite'
- PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
- PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 600 Rdornier 'Label on rois'
- PR 605 Tom-TBT 'Colorbar feature'
- PR 610 will-moore 'Add docs/contributing.rst'
- PR 612 will-moore 'Script version'
- PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7'
Conflicting PRs (not included):
- PR 616 Rdornier 'Fix labels around border'
- PR 630 will-moore 'Fix color and position for ALL new panel insets'
- PR 637 Rdornier 'Fix scalebar position'
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
- PR 114 dependabot[bot] 'Bump tar and fsevents'
- PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
- PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
Conflicting PRs (not included):
- PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
- PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
- PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
Repository: ome/omero-iviewer
Excluded PRs:
- PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft)
- PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
- PR 227 will-moore 'Vectortile investigation' (status: failure)
Updating 7a798ce..bb94cf8
Previously merged:
- PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 499 dependabot[bot] 'Bump nanoid and mocha'
Conflicting PRs (not included):
- PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
- PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Repository: ome/omero-metadata
Updating 3cd120c..55060a2
Previously merged:
- PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Repository: ome/omero-parade
Excluded PRs:
- PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
- PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
- PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
Repository: ome/omero-prometheus-tools
Already up to date.
Repository: ome/omero-rois
Excluded PRs:
- PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 33 jo-mueller 'Add roi to array functions'
Repository: ome/omero-signup
Already up to date.
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Repository: openmicroscopy/omero-test-infra
Excluded PRs:
- PR 75 marimeireles 'Microservices' (user: marimeireles)
- PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
- PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
- PR 76 will-moore 'Run cli deps'
Repository: ome/omero-upload
Already up to date.
Repository: ome/omero-virtual-microscope
Updating deab817..160d894
Previously merged:
- PR 20 jburel 'Build'
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 18 will-moore 'Build' (status: failure)
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Repository: openmicroscopy/omero-weberror
Already up to date.
Repository: openmicroscopy/omero-webtest
Already up to date.
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Repository: ome/scripts
Excluded PRs:
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Updating 4b4c755..573db34
Previously merged:
- PR 227 jburel 'Replace tostring by tobytes'
- PR 225 will-moore 'Fix param names and assertion texts in tests'
Merged PRs:
- PR 223 will-moore 'don't attempt ROI stats on big images'
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#503 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/503/)'
2025-08-14 00:48:55,279 [ scc.git] DEBUG [detached HEAD 1c3bfe1] merge master -Dorg -Ssuccess-only
2025-08-14 00:48:55,279 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-)
2025-08-14 00:48:55,279 [ scc.merge] INFO Repository: ome/omero-plugins
2025-08-14 00:48:55,279 [ scc.merge] INFO Already up to date.
2025-08-14 00:48:55,279 [ scc.merge] INFO
2025-08-14 00:48:55,279 [ scc.merge] INFO Merged PRs:
2025-08-14 00:48:55,279 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`'
2025-08-14 00:48:55,279 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`'
2025-08-14 00:48:55,279 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`'
2025-08-14 00:48:55,279 [ scc.merge] INFO
2025-08-14 00:48:55,279 [ scc.merge] INFO Repository: ome/minimal-omero-client
2025-08-14 00:48:55,280 [ scc.merge] INFO Already up to date.
2025-08-14 00:48:55,280 [ scc.merge] INFO
2025-08-14 00:48:55,280 [ scc.merge] INFO
2025-08-14 00:48:55,280 [ scc.merge] INFO Repository: ome/omero-cli-duplicate
2025-08-14 00:48:55,280 [ scc.merge] INFO Excluded PRs:
2025-08-14 00:48:55,280 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
2025-08-14 00:48:55,280 [ scc.merge] INFO Already up to date.
2025-08-14 00:48:55,280 [ scc.merge] INFO
2025-08-14 00:48:55,280 [ scc.merge] INFO
2025-08-14 00:48:55,280 [ scc.merge] INFO Repository: ome/omero-cli-render
2025-08-14 00:48:55,280 [ scc.merge] INFO Excluded PRs:
2025-08-14 00:48:55,280 [ scc.merge] INFO - PR 70 dominikl 'Update changelog for 0.8.2 release' (stage: draft)
2025-08-14 00:48:55,280 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
2025-08-14 00:48:55,280 [ scc.merge] INFO Already up to date.
2025-08-14 00:48:55,280 [ scc.merge] INFO
2025-08-14 00:48:55,280 [ scc.merge] INFO Merged PRs:
2025-08-14 00:48:55,280 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate'
2025-08-14 00:48:55,280 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands'
2025-08-14 00:48:55,280 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names'
2025-08-14 00:48:55,280 [ scc.merge] INFO
2025-08-14 00:48:55,280 [ scc.merge] INFO Repository: ome/omero-cli-zarr
2025-08-14 00:48:55,280 [ scc.merge] INFO Excluded PRs:
2025-08-14 00:48:55,280 [ scc.merge] INFO - PR 180 will-moore 'Register command' (status: failure)
2025-08-14 00:48:55,280 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' (stage: draft)
2025-08-14 00:48:55,280 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' (status: failure)
2025-08-14 00:48:55,280 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft)
2025-08-14 00:48:55,280 [ scc.merge] INFO - PR 169 will-moore 'Remove ome-zarr-py dependency' (stage: draft)
2025-08-14 00:48:55,280 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft)
2025-08-14 00:48:55,280 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft)
2025-08-14 00:48:55,280 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2025-08-14 00:48:55,280 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment)
2025-08-14 00:48:55,280 [ scc.merge] INFO Updating 11d3587..f7eea7c
2025-08-14 00:48:55,280 [ scc.merge] INFO Previously merged:
2025-08-14 00:48:55,280 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0'
2025-08-14 00:48:55,280 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer'
2025-08-14 00:48:55,280 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0'
2025-08-14 00:48:55,280 [ scc.merge] INFO - PR 147 will-moore 'Name option'
2025-08-14 00:48:55,280 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()'
2025-08-14 00:48:55,280 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests'
2025-08-14 00:48:55,280 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-14 00:48:55,281 [ scc.merge] INFO
2025-08-14 00:48:55,281 [ scc.merge] INFO Merged PRs:
2025-08-14 00:48:55,281 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels'
2025-08-14 00:48:55,281 [ scc.merge] INFO
2025-08-14 00:48:55,281 [ scc.merge] INFO Repository: ome/omero-figure
2025-08-14 00:48:55,281 [ scc.merge] INFO Excluded PRs:
2025-08-14 00:48:55,281 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier)
2025-08-14 00:48:55,281 [ scc.merge] INFO - PR 619 will-moore 'OME-Zarr support' (stage: draft)
2025-08-14 00:48:55,281 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (exclude comment)
2025-08-14 00:48:55,281 [ scc.merge] INFO Updating 9cc36cde..d2c6f5bc
2025-08-14 00:48:55,281 [ scc.merge] INFO Previously merged:
2025-08-14 00:48:55,281 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity'
2025-08-14 00:48:55,281 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4'
2025-08-14 00:48:55,281 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite'
2025-08-14 00:48:55,281 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622'
2025-08-14 00:48:55,281 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-14 00:48:55,281 [ scc.merge] INFO
2025-08-14 00:48:55,281 [ scc.merge] INFO Merged PRs:
2025-08-14 00:48:55,281 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois'
2025-08-14 00:48:55,281 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature'
2025-08-14 00:48:55,281 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst'
2025-08-14 00:48:55,281 [ scc.merge] INFO - PR 612 will-moore 'Script version'
2025-08-14 00:48:55,281 [ scc.merge] INFO - PR 639 dependabot[bot] 'Bump vite from 6.2.6 to 6.2.7'
2025-08-14 00:48:55,281 [ scc.merge] INFO
2025-08-14 00:48:55,281 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-14 00:48:55,281 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border'
2025-08-14 00:48:55,281 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets'
2025-08-14 00:48:55,281 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position'
2025-08-14 00:48:55,281 [ scc.merge] INFO
2025-08-14 00:48:55,281 [ scc.merge] INFO Repository: ome/omero-fpbioimage
2025-08-14 00:48:55,281 [ scc.merge] INFO Already up to date.
2025-08-14 00:48:55,281 [ scc.merge] INFO
2025-08-14 00:48:55,281 [ scc.merge] INFO Merged PRs:
2025-08-14 00:48:55,281 [ scc.merge] INFO - PR 18 jburel 'default size z value'
2025-08-14 00:48:55,281 [ scc.merge] INFO
2025-08-14 00:48:55,281 [ scc.merge] INFO Repository: ome/omero-gallery
2025-08-14 00:48:55,281 [ scc.merge] INFO Already up to date.
2025-08-14 00:48:55,281 [ scc.merge] INFO
2025-08-14 00:48:55,281 [ scc.merge] INFO Merged PRs:
2025-08-14 00:48:55,281 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1'
2025-08-14 00:48:55,282 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents'
2025-08-14 00:48:55,282 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3'
2025-08-14 00:48:55,282 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6'
2025-08-14 00:48:55,282 [ scc.merge] INFO
2025-08-14 00:48:55,282 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-14 00:48:55,282 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack'
2025-08-14 00:48:55,282 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack'
2025-08-14 00:48:55,282 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack'
2025-08-14 00:48:55,282 [ scc.merge] INFO
2025-08-14 00:48:55,282 [ scc.merge] INFO Repository: ome/omero-iviewer
2025-08-14 00:48:55,282 [ scc.merge] INFO Excluded PRs:
2025-08-14 00:48:55,282 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates shown over the image' (stage: draft)
2025-08-14 00:48:55,282 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft)
2025-08-14 00:48:55,282 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment)
2025-08-14 00:48:55,282 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
2025-08-14 00:48:55,282 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure)
2025-08-14 00:48:55,282 [ scc.merge] INFO Updating 7a798ce..bb94cf8
2025-08-14 00:48:55,282 [ scc.merge] INFO Previously merged:
2025-08-14 00:48:55,282 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-14 00:48:55,282 [ scc.merge] INFO
2025-08-14 00:48:55,282 [ scc.merge] INFO Merged PRs:
2025-08-14 00:48:55,282 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix'
2025-08-14 00:48:55,282 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure'
2025-08-14 00:48:55,282 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip'
2025-08-14 00:48:55,282 [ scc.merge] INFO - PR 499 dependabot[bot] 'Bump nanoid and mocha'
2025-08-14 00:48:55,282 [ scc.merge] INFO
2025-08-14 00:48:55,282 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-14 00:48:55,282 [ scc.merge] INFO - PR 502 dependabot[bot] 'Bump serialize-javascript and mocha'
2025-08-14 00:48:55,282 [ scc.merge] INFO
2025-08-14 00:48:55,282 [ scc.merge] INFO Repository: ome/omero-mapr
2025-08-14 00:48:55,282 [ scc.merge] INFO Excluded PRs:
2025-08-14 00:48:55,282 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment)
2025-08-14 00:48:55,282 [ scc.merge] INFO Already up to date.
2025-08-14 00:48:55,282 [ scc.merge] INFO
2025-08-14 00:48:55,282 [ scc.merge] INFO Merged PRs:
2025-08-14 00:48:55,282 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient'
2025-08-14 00:48:55,282 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-14 00:48:55,282 [ scc.merge] INFO
2025-08-14 00:48:55,282 [ scc.merge] INFO Repository: ome/omero-metadata
2025-08-14 00:48:55,282 [ scc.merge] INFO Updating 3cd120c..55060a2
2025-08-14 00:48:55,282 [ scc.merge] INFO Previously merged:
2025-08-14 00:48:55,283 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-14 00:48:55,283 [ scc.merge] INFO
2025-08-14 00:48:55,283 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-14 00:48:55,283 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2025-08-14 00:48:55,283 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2025-08-14 00:48:55,283 [ scc.merge] INFO
2025-08-14 00:48:55,283 [ scc.merge] INFO Repository: ome/omero-parade
2025-08-14 00:48:55,283 [ scc.merge] INFO Excluded PRs:
2025-08-14 00:48:55,283 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft)
2025-08-14 00:48:55,283 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
2025-08-14 00:48:55,283 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
2025-08-14 00:48:55,283 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment)
2025-08-14 00:48:55,283 [ scc.merge] INFO Already up to date.
2025-08-14 00:48:55,283 [ scc.merge] INFO
2025-08-14 00:48:55,283 [ scc.merge] INFO Merged PRs:
2025-08-14 00:48:55,283 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9'
2025-08-14 00:48:55,283 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2'
2025-08-14 00:48:55,283 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI'
2025-08-14 00:48:55,283 [ scc.merge] INFO
2025-08-14 00:48:55,283 [ scc.merge] INFO Repository: ome/omero-prometheus-tools
2025-08-14 00:48:55,283 [ scc.merge] INFO Already up to date.
2025-08-14 00:48:55,283 [ scc.merge] INFO
2025-08-14 00:48:55,283 [ scc.merge] INFO
2025-08-14 00:48:55,283 [ scc.merge] INFO Repository: ome/omero-rois
2025-08-14 00:48:55,283 [ scc.merge] INFO Excluded PRs:
2025-08-14 00:48:55,283 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2025-08-14 00:48:55,283 [ scc.merge] INFO Already up to date.
2025-08-14 00:48:55,283 [ scc.merge] INFO
2025-08-14 00:48:55,283 [ scc.merge] INFO Merged PRs:
2025-08-14 00:48:55,283 [ scc.merge] INFO - PR 33 jo-mueller 'Add roi to array functions'
2025-08-14 00:48:55,283 [ scc.merge] INFO
2025-08-14 00:48:55,283 [ scc.merge] INFO Repository: ome/omero-signup
2025-08-14 00:48:55,283 [ scc.merge] INFO Already up to date.
2025-08-14 00:48:55,283 [ scc.merge] INFO
2025-08-14 00:48:55,283 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-14 00:48:55,283 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
2025-08-14 00:48:55,283 [ scc.merge] INFO
2025-08-14 00:48:55,283 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra
2025-08-14 00:48:55,283 [ scc.merge] INFO Excluded PRs:
2025-08-14 00:48:55,283 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles)
2025-08-14 00:48:55,283 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' (status: failure)
2025-08-14 00:48:55,284 [ scc.merge] INFO - PR 73 marimeireles 'Rm python, add miniconda to CI' (user: marimeireles)
2025-08-14 00:48:55,284 [ scc.merge] INFO Already up to date.
2025-08-14 00:48:55,284 [ scc.merge] INFO
2025-08-14 00:48:55,284 [ scc.merge] INFO Merged PRs:
2025-08-14 00:48:55,284 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2025-08-14 00:48:55,284 [ scc.merge] INFO - PR 76 will-moore 'Run cli deps'
2025-08-14 00:48:55,284 [ scc.merge] INFO
2025-08-14 00:48:55,284 [ scc.merge] INFO Repository: ome/omero-upload
2025-08-14 00:48:55,284 [ scc.merge] INFO Already up to date.
2025-08-14 00:48:55,284 [ scc.merge] INFO
2025-08-14 00:48:55,284 [ scc.merge] INFO
2025-08-14 00:48:55,284 [ scc.merge] INFO Repository: ome/omero-virtual-microscope
2025-08-14 00:48:55,284 [ scc.merge] INFO Updating deab817..160d894
2025-08-14 00:48:55,284 [ scc.merge] INFO Previously merged:
2025-08-14 00:48:55,284 [ scc.merge] INFO - PR 20 jburel 'Build'
2025-08-14 00:48:55,284 [ scc.merge] INFO
2025-08-14 00:48:55,284 [ scc.merge] INFO
2025-08-14 00:48:55,284 [ scc.merge] INFO Repository: ome/omero-web-zarr
2025-08-14 00:48:55,284 [ scc.merge] INFO Excluded PRs:
2025-08-14 00:48:55,284 [ scc.merge] INFO - PR 18 will-moore 'Build' (status: failure)
2025-08-14 00:48:55,284 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
2025-08-14 00:48:55,284 [ scc.merge] INFO Already up to date.
2025-08-14 00:48:55,284 [ scc.merge] INFO
2025-08-14 00:48:55,284 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-14 00:48:55,284 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2025-08-14 00:48:55,284 [ scc.merge] INFO
2025-08-14 00:48:55,284 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror
2025-08-14 00:48:55,284 [ scc.merge] INFO Already up to date.
2025-08-14 00:48:55,284 [ scc.merge] INFO
2025-08-14 00:48:55,284 [ scc.merge] INFO
2025-08-14 00:48:55,284 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest
2025-08-14 00:48:55,284 [ scc.merge] INFO Already up to date.
2025-08-14 00:48:55,284 [ scc.merge] INFO
2025-08-14 00:48:55,284 [ scc.merge] INFO
2025-08-14 00:48:55,284 [ scc.merge] INFO Repository: ome/rOMERO-gateway
2025-08-14 00:48:55,284 [ scc.merge] INFO Already up to date.
2025-08-14 00:48:55,284 [ scc.merge] INFO
2025-08-14 00:48:55,284 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-14 00:48:55,284 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly'
2025-08-14 00:48:55,284 [ scc.merge] INFO
2025-08-14 00:48:55,284 [ scc.merge] INFO Repository: ome/scripts
2025-08-14 00:48:55,285 [ scc.merge] INFO Excluded PRs:
2025-08-14 00:48:55,285 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2025-08-14 00:48:55,285 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2025-08-14 00:48:55,285 [ scc.merge] INFO Updating 4b4c755..573db34
2025-08-14 00:48:55,285 [ scc.merge] INFO Previously merged:
2025-08-14 00:48:55,285 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes'
2025-08-14 00:48:55,285 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests'
2025-08-14 00:48:55,285 [ scc.merge] INFO
2025-08-14 00:48:55,285 [ scc.merge] INFO Merged PRs:
2025-08-14 00:48:55,285 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images'
2025-08-14 00:48:55,285 [ scc.merge] INFO
2025-08-14 00:48:55,285 [ scc.merge] INFO Conflicting PRs (not included):
2025-08-14 00:48:55,285 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2025-08-14 00:48:55,285 [ scc.merge] INFO
2025-08-14 00:48:55,285 [ scc.merge] DEBUG Cleaning remote branches created for merging
2025-08-14 00:48:55,285 [ scc.git] DEBUG Calling 'git remote'
2025-08-14 00:48:55,287 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2025-08-14 00:48:55,287 [ scc.git] DEBUG Calling 'git remote'
2025-08-14 00:48:55,289 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-14 00:48:55,290 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2025-08-14 00:48:55,290 [ scc.git] DEBUG Calling 'git remote'
2025-08-14 00:48:55,292 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-14 00:48:55,292 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2025-08-14 00:48:55,292 [ scc.git] DEBUG Calling 'git remote'
2025-08-14 00:48:55,294 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-14 00:48:55,294 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2025-08-14 00:48:55,294 [ scc.git] DEBUG Calling 'git remote'
2025-08-14 00:48:55,296 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-14 00:48:55,297 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2025-08-14 00:48:55,297 [ scc.git] DEBUG Calling 'git remote'
2025-08-14 00:48:55,299 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-14 00:48:55,299 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2025-08-14 00:48:55,299 [ scc.git] DEBUG Calling 'git remote'
2025-08-14 00:48:55,301 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-14 00:48:55,301 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2025-08-14 00:48:55,301 [ scc.git] DEBUG Calling 'git remote'
2025-08-14 00:48:55,303 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-14 00:48:55,303 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2025-08-14 00:48:55,303 [ scc.git] DEBUG Calling 'git remote'
2025-08-14 00:48:55,306 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-14 00:48:55,306 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2025-08-14 00:48:55,306 [ scc.git] DEBUG Calling 'git remote'
2025-08-14 00:48:55,308 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-14 00:48:55,308 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2025-08-14 00:48:55,308 [ scc.git] DEBUG Calling 'git remote'
2025-08-14 00:48:55,310 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-14 00:48:55,310 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2025-08-14 00:48:55,310 [ scc.git] DEBUG Calling 'git remote'
2025-08-14 00:48:55,312 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-14 00:48:55,312 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2025-08-14 00:48:55,313 [ scc.git] DEBUG Calling 'git remote'
2025-08-14 00:48:55,315 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-14 00:48:55,315 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2025-08-14 00:48:55,315 [ scc.git] DEBUG Calling 'git remote'
2025-08-14 00:48:55,317 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-14 00:48:55,317 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2025-08-14 00:48:55,317 [ scc.git] DEBUG Calling 'git remote'
2025-08-14 00:48:55,320 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-14 00:48:55,320 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2025-08-14 00:48:55,320 [ scc.git] DEBUG Calling 'git remote'
2025-08-14 00:48:55,322 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-14 00:48:55,322 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2025-08-14 00:48:55,322 [ scc.git] DEBUG Calling 'git remote'
2025-08-14 00:48:55,324 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-14 00:48:55,324 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2025-08-14 00:48:55,324 [ scc.git] DEBUG Calling 'git remote'
2025-08-14 00:48:55,326 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-14 00:48:55,326 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2025-08-14 00:48:55,327 [ scc.git] DEBUG Calling 'git remote'
2025-08-14 00:48:55,329 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-14 00:48:55,329 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2025-08-14 00:48:55,329 [ scc.git] DEBUG Calling 'git remote'
2025-08-14 00:48:55,331 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-14 00:48:55,331 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2025-08-14 00:48:55,331 [ scc.git] DEBUG Calling 'git remote'
2025-08-14 00:48:55,333 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-14 00:48:55,333 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2025-08-14 00:48:55,334 [ scc.git] DEBUG Calling 'git remote'
2025-08-14 00:48:55,336 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2025-08-14 00:48:55,336 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2025-08-14 00:48:55,336 [ scc.git] DEBUG Calling 'git remote'
2025-08-14 00:48:55,338 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
Update component versions
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
warnings.warn(
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer.
warnings.warn(
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead
warnings.warn(
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
Updating omero-gateway from 5.10.0 to 5.10.4-SNAPSHOT
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Commit all component version changes
Entering 'minimal-omero-client'
Entering 'omero-cli-duplicate'
Entering 'omero-cli-render'
Entering 'omero-cli-zarr'
Entering 'omero-figure'
Entering 'omero-fpbioimage'
Entering 'omero-gallery'
Entering 'omero-iviewer'
Entering 'omero-mapr'
Entering 'omero-metadata'
Entering 'omero-parade'
Entering 'omero-prometheus-tools'
Entering 'omero-rois'
Entering 'omero-signup'
Entering 'omero-test-infra'
Entering 'omero-upload'
Entering 'omero-virtual-microscope'
Entering 'omero-web-zarr'
Entering 'omero-weberror'
Entering 'omero-webtest'
Entering 'rOMERO-gateway'
Entering 'scripts'
Entering 'minimal-omero-client'
[detached HEAD cc9e2ec] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Entering 'omero-cli-duplicate'
HEAD detached from 4777ef8
nothing to commit, working tree clean
Entering 'omero-cli-render'
HEAD detached from ce6e13c
nothing to commit, working tree clean
Entering 'omero-cli-zarr'
HEAD detached from 11d3587
Untracked files:
(use "git add <file>..." to include in what will be committed)
.eggs/
nothing added to commit but untracked files present (use "git add" to track)
Entering 'omero-figure'
HEAD detached from 9cc36cde
nothing to commit, working tree clean
Entering 'omero-fpbioimage'
HEAD detached from 3b6c05a
nothing to commit, working tree clean
Entering 'omero-gallery'
HEAD detached from 2a621da
nothing to commit, working tree clean
Entering 'omero-iviewer'
HEAD detached from 7a798ce
nothing to commit, working tree clean
Entering 'omero-mapr'
HEAD detached from 0a557da
nothing to commit, working tree clean
Entering 'omero-metadata'
HEAD detached from 3cd120c
nothing to commit, working tree clean
Entering 'omero-parade'
HEAD detached from fb5ae86
nothing to commit, working tree clean
Entering 'omero-prometheus-tools'
HEAD detached from eb47378
nothing to commit, working tree clean
Entering 'omero-rois'
HEAD detached from bdfeb5e
nothing to commit, working tree clean
Entering 'omero-signup'
HEAD detached from be76813
nothing to commit, working tree clean
Entering 'omero-test-infra'
HEAD detached from cda3ec6
nothing to commit, working tree clean
Entering 'omero-upload'
HEAD detached from 100f6ae
nothing to commit, working tree clean
Entering 'omero-virtual-microscope'
HEAD detached from deab817
nothing to commit, working tree clean
Entering 'omero-web-zarr'
HEAD detached from 8f3c313
nothing to commit, working tree clean
Entering 'omero-weberror'
HEAD detached from 70b01ed
nothing to commit, working tree clean
Entering 'omero-webtest'
HEAD detached from 5bfef29
nothing to commit, working tree clean
Entering 'rOMERO-gateway'
HEAD detached from 7b5d64d
nothing to commit, working tree clean
Entering 'scripts'
HEAD detached from 4b4c755
nothing to commit, working tree clean
[detached HEAD d8d8b63] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2025-08-14 00:49:44,795 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2025-08-14 00:49:54,643 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2025-08-14 00:49:57,297 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-08-14 00:50:02,373 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2025-08-14 00:50:44,279 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci
[Pipeline] archiveArtifacts
Archiving artifacts
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS
![[Jenkins]](/jenkins/static/eb00aee0/images/svgs/logo.svg){kind=logo}
