12:28:01Started by upstream project "Trigger" build number 4112:28:01originally caused by:
12:28:01 Started by user devspace12:28:01Running as SYSTEM
12:28:01Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-push
12:28:01The recommended git tool is: NONE
12:28:01No credentials specified
12:28:01 > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-push/src/.git # timeout=10
12:28:01Fetching changes from the remote Git repository
12:28:01 > git config remote.origin.url https://github.com/ome/openmicroscopy.git # timeout=10
12:28:01Fetching upstream changes from https://github.com/ome/openmicroscopy.git12:28:01 > git --version # timeout=10
12:28:01 > git --version # 'git version 2.47.3'
12:28:01 > git fetch --tags --force --progress -- https://github.com/ome/openmicroscopy.git +refs/heads/*:refs/remotes/origin/* # timeout=30
12:28:02 > git rev-parse origin/develop^{commit} # timeout=10
12:28:02Checking out Revision 0763546fbc345dbc1bbcf1995bd9d631f5ba1567 (origin/develop)
12:28:02 > git config core.sparsecheckout # timeout=10
12:28:02 > git checkout -f 0763546fbc345dbc1bbcf1995bd9d631f5ba1567 # timeout=30
12:28:02Commit message: "Merge pull request #6441 from sbesson/tmpdir_var_tmp"
12:28:02 > git rev-list --no-walk 0763546fbc345dbc1bbcf1995bd9d631f5ba1567 # timeout=10
12:28:02Cleaning workspace
12:28:02 > git rev-parse --verify HEAD # timeout=10
12:28:02Resetting working tree
12:28:02 > git reset --hard # timeout=10
12:28:03 > git clean -fdx # timeout=10
12:28:03Copied 1 artifact from "OMERO-python-superbuild-build" build number 1812:28:03[OMERO-push] $ /bin/bash -xe /tmp/jenkins7589730576309980426.sh
12:28:03+ python3.11 -mvenv venv
12:28:05+ source /home/omero/workspace/OMERO-push/venv/bin/activate
12:28:05++ deactivate nondestructive
12:28:05++ '[' -n '' ']'
12:28:05++ '[' -n '' ']'
12:28:05++ hash -r
12:28:05++ '[' -n '' ']'
12:28:05++ unset VIRTUAL_ENV
12:28:05++ unset VIRTUAL_ENV_PROMPT
12:28:05++ '[' '!' nondestructive = nondestructive ']'
12:28:05++ VIRTUAL_ENV=/home/omero/workspace/OMERO-push/venv
12:28:05++ export VIRTUAL_ENV
12:28:05++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
12:28:05++ PATH=/home/omero/workspace/OMERO-push/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
12:28:05++ export PATH
12:28:05++ '[' -n '' ']'
12:28:05++ '[' -z '' ']'
12:28:05++ _OLD_VIRTUAL_PS1=
12:28:05++ PS1='(venv) '
12:28:05++ export PS1
12:28:05++ VIRTUAL_ENV_PROMPT='(venv) '
12:28:05++ export VIRTUAL_ENV_PROMPT
12:28:05++ hash -r
12:28:05+ pip install -U pip
12:28:07Requirement already satisfied: pip in ./venv/lib64/python3.11/site-packages (25.3)
12:28:07+ pip install -U scc
12:28:08Requirement already satisfied: scc in ./venv/lib64/python3.11/site-packages (0.20.0)
12:28:08Requirement already satisfied: PyGithub>=1.54 in ./venv/lib64/python3.11/site-packages (from scc) (2.8.1)
12:28:08Requirement already satisfied: PyYAML>=5.1 in ./venv/lib64/python3.11/site-packages (from scc) (6.0.3)
12:28:08Requirement already satisfied: future in ./venv/lib64/python3.11/site-packages (from scc) (1.0.0)
12:28:08Requirement already satisfied: ruamel.yaml in ./venv/lib64/python3.11/site-packages (from scc) (0.18.17)
12:28:08Requirement already satisfied: ruamel.yaml.jinja2 in ./venv/lib64/python3.11/site-packages (from scc) (0.2.7)
12:28:08Requirement already satisfied: six in ./venv/lib64/python3.11/site-packages (from scc) (1.17.0)
12:28:08Requirement already satisfied: urllib3<2 in ./venv/lib64/python3.11/site-packages (from scc) (1.26.20)
12:28:08Requirement already satisfied: yaclifw<0.3,>=0.2.0 in ./venv/lib64/python3.11/site-packages (from scc) (0.2.0)
12:28:08Requirement already satisfied: pynacl>=1.4.0 in ./venv/lib64/python3.11/site-packages (from PyGithub>=1.54->scc) (1.6.1)
12:28:08Requirement already satisfied: requests>=2.14.0 in ./venv/lib64/python3.11/site-packages (from PyGithub>=1.54->scc) (2.32.5)
12:28:08Requirement already satisfied: pyjwt>=2.4.0 in ./venv/lib64/python3.11/site-packages (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (2.10.1)
12:28:08Requirement already satisfied: typing-extensions>=4.5.0 in ./venv/lib64/python3.11/site-packages (from PyGithub>=1.54->scc) (4.15.0)
12:28:08Requirement already satisfied: cryptography>=3.4.0 in ./venv/lib64/python3.11/site-packages (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (46.0.3)
12:28:08Requirement already satisfied: cffi>=2.0.0 in ./venv/lib64/python3.11/site-packages (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (2.0.0)
12:28:08Requirement already satisfied: pycparser in ./venv/lib64/python3.11/site-packages (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) (2.23)
12:28:08Requirement already satisfied: charset_normalizer<4,>=2 in ./venv/lib64/python3.11/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (3.4.4)
12:28:08Requirement already satisfied: idna<4,>=2.5 in ./venv/lib64/python3.11/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (3.11)
12:28:08Requirement already satisfied: certifi>=2017.4.17 in ./venv/lib64/python3.11/site-packages (from requests>=2.14.0->PyGithub>=1.54->scc) (2025.11.12)
12:28:08Requirement already satisfied: ruamel.yaml.clib>=0.2.15 in ./venv/lib64/python3.11/site-packages (from ruamel.yaml->scc) (0.2.15)
12:28:08+ test -e src
12:28:08+ cd src
12:28:08++ git config github.user
12:28:08+ user=snoopycrimecop
12:28:08+ scc merge develop --no-ask --reset --shallow -S success-only
12:28:152026-01-14 12:28:15,245 [ scc.merge] INFO Merging Pull Request(s) based on develop
12:28:152026-01-14 12:28:15,245 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization
12:28:152026-01-14 12:28:15,246 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies
12:28:152026-01-14 12:28:15,246 [ scc.merge] INFO Excluding Pull Request(s) staged as draft
12:28:152026-01-14 12:28:15,246 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking
12:28:152026-01-14 12:28:15,246 [ scc.merge] INFO Excluding Pull Request(s) without successful status
12:28:262026-01-14 12:28:26,511 [ scc.merge] INFO Repository: ome/openmicroscopy
12:28:262026-01-14 12:28:26,511 [ scc.merge] INFO Excluded PRs:
12:28:262026-01-14 12:28:26,511 [ scc.merge] INFO - PR 6423 jburel 'Use \d' (status: failure)
12:28:262026-01-14 12:28:26,511 [ scc.merge] INFO - PR 6212 jburel 'add test to import images' (exclude comment)
12:28:262026-01-14 12:28:26,511 [ scc.merge] INFO Already up to date.
12:28:262026-01-14 12:28:26,511 [ scc.merge] INFO
12:28:262026-01-14 12:28:26,511 [ scc.merge] INFO Merged PRs:
12:28:262026-01-14 12:28:26,511 [ scc.merge] INFO - PR 6353 jburel 'remove dependencies'
12:28:262026-01-14 12:28:26,511 [ scc.merge] INFO - PR 6442 snoopycrimecop 'update dependencies'
12:28:262026-01-14 12:28:26,511 [ scc.merge] INFO
12:28:26+ cp etc/omero.properties etc/omero.properties.bak
12:28:26+ rm etc/omero.properties
12:28:26+ touch etc/omero.properties
12:28:26++ sed -n '/Internal dependencies/=' etc/omero.properties.bak
12:28:26+ ne=249
12:28:26++ sed -n 1,249p etc/omero.properties.bak
12:28:26+ line='##
12:28:26## omero.properties
12:28:26## ----------------
12:28:26##
12:28:26## DO NOT EDIT!
12:28:26##
12:28:26##
12:28:26## Any of these properties can be altered by using `omero config`. MODIFYING
12:28:26## THIS FILE DOES NOT ALTER SERVER BEHAVIOR. It solely defines the defaults
12:28:26## at compile time!
12:28:26##
12:28:26## For an overview of these properties, see
12:28:26## https://docs.openmicroscopy.org/latest/omero/sysadmins/config.html12:28:26##
12:28:26## Properties marked with "DEVELOPMENT" should not be used in production.
12:28:2612:28:26# Comma separated list of Ice transports available to clients. The default
12:28:26# value ("ssl,tcp") instructs Ice to open the ports specified by the
12:28:26# omero.ports.ssl and omero.ports.tcp properties. Restricting to "ssl"
12:28:26# will prevent all non-encrypted connections to the OMERO server.
12:28:26#
12:28:26# Additionally, there are two experimental values for using websockets:
12:28:26# "ws" and "wss" for unencrypted and encrypted, respectively. The ports
12:28:26# that are opened are controlled by the omero.ports.ws and omero.ports.wss
12:28:26# properties. To enable all possible protocols use: "ssl,tcp,wss,ws".
12:28:26#
12:28:26# Note: When using websockets behind a web server like nginx, additional
12:28:26# configuration may be needed.
12:28:26omero.client.icetransports=ssl,tcp
12:28:2612:28:26# The prefix to apply to all port numbers (SSL, TCP, registry) used by the
12:28:26# server
12:28:26omero.ports.prefix=
12:28:2612:28:26# The Glacier2 SSL port number to use
12:28:26omero.ports.ssl=4064
12:28:2612:28:26# The Glacier2 TCP port number to use (unencrypted)
12:28:26omero.ports.tcp=4063
12:28:2612:28:26# The Glacier2 WSS port number to use
12:28:26omero.ports.wss=4066
12:28:2612:28:26# The Glacier2 WS port number to use (unencrypted)
12:28:26omero.ports.ws=4065
12:28:2612:28:26# The IceGrid registry port number to use
12:28:26omero.ports.registry=4061
12:28:2612:28:26#############################################
12:28:26## JVM configuration
12:28:26##
12:28:26## Note: changes to the omero.jvmcfg properties
12:28:26## will *not* be reflected in OMERO.server
12:28:26## since they are defined in OMERO.py.
12:28:26#############################################
12:28:26## (For documentation only)
12:28:26# Memory strategy which will be used by default.
12:28:26# Options include: percent, manual
12:28:26omero.jvmcfg.strategy=percent
12:28:2612:28:26## (For documentation only)
12:28:26# Explicit value for the `-Xmx` argument, e.g.
12:28:26# "1g"
12:28:26omero.jvmcfg.heap_size=
12:28:2612:28:26## (For documentation only)
12:28:26# Explicit value for the MaxPermSize argument
12:28:26# to the JVM, e.g. "500M". Ignored for Java8+
12:28:26omero.jvmcfg.perm_gen=
12:28:2612:28:26## (For documentation only)
12:28:26# Toggles on or off heap dumps on OOMs. Default is "off".
12:28:26# The special value "tmp" will create the heap dumps in
12:28:26# your temp directory.
12:28:26omero.jvmcfg.heap_dump=
12:28:2612:28:26## (For documentation only)
12:28:26# Used only by the percent strategy. An integer between 0
12:28:26# and 100 which is the percent of active memory that will
12:28:26# be used by the service.
12:28:26omero.jvmcfg.percent=
12:28:2612:28:26## (For documentation only)
12:28:26# Contains other parameters which should be passed to the
12:28:26# JVM. The value of "append" is treated as if it were on
12:28:26# the command line so will be separated on whitespace.
12:28:26# For example, '\''-XX:-PrintGC -XX:+UseCompressedOops'\'' would
12:28:26# results in two new arguments.
12:28:26# Note that when using `config set` from the command line
12:28:26# one may need to give a prior `--` option to prevent a value
12:28:26# starting with `-` from already being parsed as an option,
12:28:26# and values may need quoting to prevent whitespace or other
12:28:26# significant characters from being interpreted prematurely.
12:28:2612:28:26omero.jvmcfg.append=
12:28:2612:28:26## (For documentation only)
12:28:26# Manual override of the total system memory that
12:28:26# OMERO will *think* is present on the local OS (MB).
12:28:26# If unset, an attempt will be made to detect the actual
12:28:26# amount: first by using the Python library `psutil` and
12:28:26# if that is not installed, by running a Java tool. If
12:28:26# neither works, 4.0GB is assumed.
12:28:26omero.jvmcfg.system_memory=
12:28:2612:28:26## (For documentation only)
12:28:26# Suggestion for strategies as to the minimum memory
12:28:26# that they will use for calculating JVM settings (MB).
12:28:26omero.jvmcfg.min_system_memory=3414
12:28:2612:28:26## (For documentation only)
12:28:26# Suggestion for strategies as to the maximum memory
12:28:26# that they will use for calculating JVM settings (MB).
12:28:26omero.jvmcfg.max_system_memory=48000
12:28:2612:28:2612:28:26#############################################
12:28:26## Logging properties
12:28:26##
12:28:26## Note: changes to the default omero.logging values in
12:28:26## this file will *not* be reflected in OMERO.server
12:28:26## since they are defined in OMERO.py
12:28:26#############################################
12:28:2612:28:26## (For documentation only)
12:28:26# Relative server directory where the log files should be stored.
12:28:26omero.logging.directory=var/log/
12:28:2612:28:26## (For documentation only)
12:28:26# Whether the server log files should be rotated at a certain time
12:28:26# interval. If true, log files will be rolled over at midnight.
12:28:26# Otherwise, log files will be rolled over at a predetermined size,
12:28:26# see omero.logging.logsize for more information.
12:28:26omero.logging.timedlog=false
12:28:2612:28:26## (For documentation only)
12:28:26# If omero.logging.timedlog is false or unset, specifies the
12:28:26# maximum size of the server log files in bytes above which a
12:28:26# new log file should be created.
12:28:26omero.logging.logsize=5000000
12:28:2612:28:26## (For documentation only)
12:28:26# If omero.logging.timedlog is false or unset, specifies the
12:28:26# number of old server log files that should be kept. Old log
12:28:26# files will be saved by appending the extensions '\''.1'\'', '\''.2'\'' etc.
12:28:26omero.logging.lognum=9
12:28:2612:28:26## (For documentation only)
12:28:26# Specifies the threshold for the Python servers log files. Logging messages
12:28:26# which are less severe than this value will be ignored. For a list of
12:28:26# available values, see https://docs.python.org/3/library/logging.html#levels.
12:28:26omero.logging.level=20
12:28:2612:28:26#############################################
12:28:26## Ice overrides
12:28:26##
12:28:26## Though not used directly by OMERO, a number
12:28:26## of properties prefixed with "Ice.*" will
12:28:26## alter the behavior of the OMERO runtime
12:28:26## by configuring the Ice communicators. For a
12:28:26## full listing see:
12:28:26##
12:28:26## http://doc.zeroc.com/display/Ice/Property+Reference12:28:26## For more information see
12:28:26## https://docs.openmicroscopy.org/latest/omero/sysadmins/troubleshooting.html#server-fails-to-start12:28:26#############################################
12:28:2612:28:26# Disable IPv6 by setting to 0. Only needed in
12:28:26# certain situations.
12:28:26Ice.IPv6=1
12:28:2612:28:26# Glacier2Template IceSSL defaults and overrides,
12:28:26# see https://doc.zeroc.com/ice/3.6/property-reference/icessl.
12:28:26# Any property beginning ``omero.glacier2.IceSSL.`` will be used to
12:28:26# update the corresponding IceSSL. property.
12:28:26omero.glacier2.IceSSL=
12:28:2612:28:26# Glacier2Template SSL maximum allowed protocol (mac bug)
12:28:26omero.glacier2.IceSSL.ProtocolVersionMax=tls1_1
12:28:26# Glacier2Template SSL allowed cipher suites
12:28:26omero.glacier2.IceSSL.Ciphers=ADH:!LOW:!MD5:!EXP:!3DES:@STRENGTH
12:28:26# Glacier2Template SSL verification requirements
12:28:26omero.glacier2.IceSSL.VerifyPeer=0
12:28:26# Glacier2Template SSL allowed protocols
12:28:26omero.glacier2.IceSSL.Protocols=tls1
12:28:2612:28:26# Override the default set of OMERO services.
12:28:26# For example, to run OMERO.server with Blitz and Tables only
12:28:26# (i.e. disable Processor, DropBox, Indexer, PixelData)
12:28:26# set this to ``master:Blitz-0,Tables-0``.
12:28:26# Also use this to distribute OMERO services across multiple nodes,
12:28:26# for example:
12:28:26# ``master:Blitz-0,Tables-0 worker1:Processor-0``.
12:28:26# See
12:28:26# https://docs.openmicroscopy.org/omero/latest/sysadmins/grid.html#deployment-examples12:28:26omero.server.nodedescriptors=
12:28:2612:28:26#############################################
12:28:26## Darwin (OS X) specific defaults for templated configuration files only.
12:28:26## ``_xxx.yyy.darwin`` properties will override xxx.yyy properties in this
12:28:26## file.
12:28:26## Do not set these properties in ``omero config``, instead set the original
12:28:26## ``xxx.yyy`` property
12:28:26#############################################
12:28:26_omero.glacier2.IceSSL.Ciphers.darwin=(AES)
12:28:2612:28:26## (For documentation only)
12:28:26# Name of the Python module to use when starting the Tables service
12:28:26omero.tables.module=runTables
12:28:2612:28:26#############################################
12:28:26## Server product name for release artifacts
12:28:26#############################################
12:28:26product.name=OMERO.server
12:28:2612:28:26#############################################
12:28:26### Properties below this marker are ignored by
12:28:26### omero.install.config_parser.PropertyParser
12:28:26### END
12:28:2612:28:26#############################################
12:28:26## Library versions
12:28:26#############################################
12:28:26##
12:28:26versions.findbugs=1.2.1
12:28:26versions.ice36=3.6.5
12:28:26versions.ice36_lib=36
12:28:26## internal
12:28:26versions.omeroshares36=3.6.3
12:28:26versions.omeromock36=3.6.3
12:28:26versions.icedb36=3.6.3
12:28:26versions.ipython=1.2.1
12:28:2612:28:26versions.janino=2.5.10
12:28:2612:28:26versions.reportng=1.1.1
12:28:2612:28:26versions.testng=7.5
12:28:26versions.velocity=1.4
12:28:2612:28:26versions.omero-pypi=https://pypi.io/packages/source/o/PACKAGE12:28:26versions.omero-scripts-url=${versions.omero-pypi}
12:28:2612:28:26###
12:28:26### Appended Values
12:28:26###
12:28:2612:28:26## Internal dependencies'
12:28:26+ echo '##
12:28:26## omero.properties
12:28:26## ----------------
12:28:26##
12:28:26## DO NOT EDIT!
12:28:26##
12:28:26##
12:28:26## Any of these properties can be altered by using `omero config`. MODIFYING
12:28:26## THIS FILE DOES NOT ALTER SERVER BEHAVIOR. It solely defines the defaults
12:28:26## at compile time!
12:28:26##
12:28:26## For an overview of these properties, see
12:28:26## https://docs.openmicroscopy.org/latest/omero/sysadmins/config.html12:28:26##
12:28:26## Properties marked with "DEVELOPMENT" should not be used in production.
12:28:2612:28:26# Comma separated list of Ice transports available to clients. The default
12:28:26# value ("ssl,tcp") instructs Ice to open the ports specified by the
12:28:26# omero.ports.ssl and omero.ports.tcp properties. Restricting to "ssl"
12:28:26# will prevent all non-encrypted connections to the OMERO server.
12:28:26#
12:28:26# Additionally, there are two experimental values for using websockets:
12:28:26# "ws" and "wss" for unencrypted and encrypted, respectively. The ports
12:28:26# that are opened are controlled by the omero.ports.ws and omero.ports.wss
12:28:26# properties. To enable all possible protocols use: "ssl,tcp,wss,ws".
12:28:26#
12:28:26# Note: When using websockets behind a web server like nginx, additional
12:28:26# configuration may be needed.
12:28:26omero.client.icetransports=ssl,tcp
12:28:2612:28:26# The prefix to apply to all port numbers (SSL, TCP, registry) used by the
12:28:26# server
12:28:26omero.ports.prefix=
12:28:2612:28:26# The Glacier2 SSL port number to use
12:28:26omero.ports.ssl=4064
12:28:2612:28:26# The Glacier2 TCP port number to use (unencrypted)
12:28:26omero.ports.tcp=4063
12:28:2612:28:26# The Glacier2 WSS port number to use
12:28:26omero.ports.wss=4066
12:28:2612:28:26# The Glacier2 WS port number to use (unencrypted)
12:28:26omero.ports.ws=4065
12:28:2612:28:26# The IceGrid registry port number to use
12:28:26omero.ports.registry=4061
12:28:2612:28:26#############################################
12:28:26## JVM configuration
12:28:26##
12:28:26## Note: changes to the omero.jvmcfg properties
12:28:26## will *not* be reflected in OMERO.server
12:28:26## since they are defined in OMERO.py.
12:28:26#############################################
12:28:26## (For documentation only)
12:28:26# Memory strategy which will be used by default.
12:28:26# Options include: percent, manual
12:28:26omero.jvmcfg.strategy=percent
12:28:2612:28:26## (For documentation only)
12:28:26# Explicit value for the `-Xmx` argument, e.g.
12:28:26# "1g"
12:28:26omero.jvmcfg.heap_size=
12:28:2612:28:26## (For documentation only)
12:28:26# Explicit value for the MaxPermSize argument
12:28:26# to the JVM, e.g. "500M". Ignored for Java8+
12:28:26omero.jvmcfg.perm_gen=
12:28:2612:28:26## (For documentation only)
12:28:26# Toggles on or off heap dumps on OOMs. Default is "off".
12:28:26# The special value "tmp" will create the heap dumps in
12:28:26# your temp directory.
12:28:26omero.jvmcfg.heap_dump=
12:28:2612:28:26## (For documentation only)
12:28:26# Used only by the percent strategy. An integer between 0
12:28:26# and 100 which is the percent of active memory that will
12:28:26# be used by the service.
12:28:26omero.jvmcfg.percent=
12:28:2612:28:26## (For documentation only)
12:28:26# Contains other parameters which should be passed to the
12:28:26# JVM. The value of "append" is treated as if it were on
12:28:26# the command line so will be separated on whitespace.
12:28:26# For example, '\''-XX:-PrintGC -XX:+UseCompressedOops'\'' would
12:28:26# results in two new arguments.
12:28:26# Note that when using `config set` from the command line
12:28:26# one may need to give a prior `--` option to prevent a value
12:28:26# starting with `-` from already being parsed as an option,
12:28:26# and values may need quoting to prevent whitespace or other
12:28:26# significant characters from being interpreted prematurely.
12:28:2612:28:26omero.jvmcfg.append=
12:28:2612:28:26## (For documentation only)
12:28:26# Manual override of the total system memory that
12:28:26# OMERO will *think* is present on the local OS (MB).
12:28:26# If unset, an attempt will be made to detect the actual
12:28:26# amount: first by using the Python library `psutil` and
12:28:26# if that is not installed, by running a Java tool. If
12:28:26# neither works, 4.0GB is assumed.
12:28:26omero.jvmcfg.system_memory=
12:28:2612:28:26## (For documentation only)
12:28:26# Suggestion for strategies as to the minimum memory
12:28:26# that they will use for calculating JVM settings (MB).
12:28:26omero.jvmcfg.min_system_memory=3414
12:28:2612:28:26## (For documentation only)
12:28:26# Suggestion for strategies as to the maximum memory
12:28:26# that they will use for calculating JVM settings (MB).
12:28:26omero.jvmcfg.max_system_memory=48000
12:28:2612:28:2612:28:26#############################################
12:28:26## Logging properties
12:28:26##
12:28:26## Note: changes to the default omero.logging values in
12:28:26## this file will *not* be reflected in OMERO.server
12:28:26## since they are defined in OMERO.py
12:28:26#############################################
12:28:2612:28:26## (For documentation only)
12:28:26# Relative server directory where the log files should be stored.
12:28:26omero.logging.directory=var/log/
12:28:2612:28:26## (For documentation only)
12:28:26# Whether the server log files should be rotated at a certain time
12:28:26# interval. If true, log files will be rolled over at midnight.
12:28:26# Otherwise, log files will be rolled over at a predetermined size,
12:28:26# see omero.logging.logsize for more information.
12:28:26omero.logging.timedlog=false
12:28:2612:28:26## (For documentation only)
12:28:26# If omero.logging.timedlog is false or unset, specifies the
12:28:26# maximum size of the server log files in bytes above which a
12:28:26# new log file should be created.
12:28:26omero.logging.logsize=5000000
12:28:2612:28:26## (For documentation only)
12:28:26# If omero.logging.timedlog is false or unset, specifies the
12:28:26# number of old server log files that should be kept. Old log
12:28:26# files will be saved by appending the extensions '\''.1'\'', '\''.2'\'' etc.
12:28:26omero.logging.lognum=9
12:28:2612:28:26## (For documentation only)
12:28:26# Specifies the threshold for the Python servers log files. Logging messages
12:28:26# which are less severe than this value will be ignored. For a list of
12:28:26# available values, see https://docs.python.org/3/library/logging.html#levels.
12:28:26omero.logging.level=20
12:28:2612:28:26#############################################
12:28:26## Ice overrides
12:28:26##
12:28:26## Though not used directly by OMERO, a number
12:28:26## of properties prefixed with "Ice.*" will
12:28:26## alter the behavior of the OMERO runtime
12:28:26## by configuring the Ice communicators. For a
12:28:26## full listing see:
12:28:26##
12:28:26## http://doc.zeroc.com/display/Ice/Property+Reference12:28:26## For more information see
12:28:26## https://docs.openmicroscopy.org/latest/omero/sysadmins/troubleshooting.html#server-fails-to-start12:28:26#############################################
12:28:2612:28:26# Disable IPv6 by setting to 0. Only needed in
12:28:26# certain situations.
12:28:26Ice.IPv6=1
12:28:2612:28:26# Glacier2Template IceSSL defaults and overrides,
12:28:26# see https://doc.zeroc.com/ice/3.6/property-reference/icessl.
12:28:26# Any property beginning ``omero.glacier2.IceSSL.`` will be used to
12:28:26# update the corresponding IceSSL. property.
12:28:26omero.glacier2.IceSSL=
12:28:2612:28:26# Glacier2Template SSL maximum allowed protocol (mac bug)
12:28:26omero.glacier2.IceSSL.ProtocolVersionMax=tls1_1
12:28:26# Glacier2Template SSL allowed cipher suites
12:28:26omero.glacier2.IceSSL.Ciphers=ADH:!LOW:!MD5:!EXP:!3DES:@STRENGTH
12:28:26# Glacier2Template SSL verification requirements
12:28:26omero.glacier2.IceSSL.VerifyPeer=0
12:28:26# Glacier2Template SSL allowed protocols
12:28:26omero.glacier2.IceSSL.Protocols=tls1
12:28:2612:28:26# Override the default set of OMERO services.
12:28:26# For example, to run OMERO.server with Blitz and Tables only
12:28:26# (i.e. disable Processor, DropBox, Indexer, PixelData)
12:28:26# set this to ``master:Blitz-0,Tables-0``.
12:28:26# Also use this to distribute OMERO services across multiple nodes,
12:28:26# for example:
12:28:26# ``master:Blitz-0,Tables-0 worker1:Processor-0``.
12:28:26# See
12:28:26# https://docs.openmicroscopy.org/omero/latest/sysadmins/grid.html#deployment-examples12:28:26omero.server.nodedescriptors=
12:28:2612:28:26#############################################
12:28:26## Darwin (OS X) specific defaults for templated configuration files only.
12:28:26## ``_xxx.yyy.darwin`` properties will override xxx.yyy properties in this
12:28:26## file.
12:28:26## Do not set these properties in ``omero config``, instead set the original
12:28:26## ``xxx.yyy`` property
12:28:26#############################################
12:28:26_omero.glacier2.IceSSL.Ciphers.darwin=(AES)
12:28:2612:28:26## (For documentation only)
12:28:26# Name of the Python module to use when starting the Tables service
12:28:26omero.tables.module=runTables
12:28:2612:28:26#############################################
12:28:26## Server product name for release artifacts
12:28:26#############################################
12:28:26product.name=OMERO.server
12:28:2612:28:26#############################################
12:28:26### Properties below this marker are ignored by
12:28:26### omero.install.config_parser.PropertyParser
12:28:26### END
12:28:2612:28:26#############################################
12:28:26## Library versions
12:28:26#############################################
12:28:26##
12:28:26versions.findbugs=1.2.1
12:28:26versions.ice36=3.6.5
12:28:26versions.ice36_lib=36
12:28:26## internal
12:28:26versions.omeroshares36=3.6.3
12:28:26versions.omeromock36=3.6.3
12:28:26versions.icedb36=3.6.3
12:28:26versions.ipython=1.2.1
12:28:2612:28:26versions.janino=2.5.10
12:28:2612:28:26versions.reportng=1.1.1
12:28:2612:28:26versions.testng=7.5
12:28:26versions.velocity=1.4
12:28:2612:28:26versions.omero-pypi=https://pypi.io/packages/source/o/PACKAGE12:28:26versions.omero-scripts-url=${versions.omero-pypi}
12:28:2612:28:26###
12:28:26### Appended Values
12:28:26###
12:28:2612:28:26## Internal dependencies'
12:28:26+ echo versions.omero-pypi=https://BRANCHCI.openmicroscopy.org/jenkins//job/OMERO-python-superbuild-build/lastSuccessfulBuild/artifact/PACKAGE/dist/12:28:26+ echo versions.omero-github=https://github.com/snoopycrimecop/PACKAGE/archive12:28:26+ echo versions.scripts-prefix=
12:28:26+ echo versions.scripts=merge_ci
12:28:26+ cat /home/omero/workspace/OMERO-push/version.properties
12:28:26+ git commit -a -m 'Add version.properties to etc/omero.properties'
12:28:26[detached HEAD c0aeca986d] Add version.properties to etc/omero.properties
12:28:26 1 file changed, 46 insertions(+), 7 deletions(-)
12:28:26+ git push -f git@github.com:snoopycrimecop/openmicroscopy.git HEAD:refs/heads/merge_ci
12:28:28To github.com:snoopycrimecop/openmicroscopy.git
12:28:28 + 31c47ae256...c0aeca986d HEAD -> merge_ci (forced update)
12:28:28Finished: SUCCESS
