![[Jenkins]](/jenkins/static/03a0bb70/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 272 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision e849d7220735d67c4a474051cc03805d0a822cde (refs/remotes/origin/master) > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f e849d7220735d67c4a474051cc03805d0a822cde # timeout=10 Commit message: "Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1" > git rev-list --no-walk e849d7220735d67c4a474051cc03805d0a822cde # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 235 [Pipeline] sh + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - > git submodule update --init --recursive omero-marshal # timeout=10 > git submodule update --init --recursive omero-dropbox # timeout=10 > git submodule update --init --recursive omero-scripts # timeout=10 + popd ~/workspace/OMERO-python-superbuild-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.3.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.3.1 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.5.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.9.0-py3-none-any.whl.metadata (3.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-43.0.3-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.4 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (34 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.8.30-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.5.0-py3-none-any.whl (375 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.9.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (724 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.8.30-py3-none-any.whl (167 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (144 kB) Using cached cryptography-43.0.3-cp39-abi3-manylinux_2_28_x86_64.whl (4.0 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.5.0 PyYAML-6.0.2 certifi-2024.8.30 cffi-1.17.1 charset-normalizer-3.4.0 cryptography-43.0.3 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.9.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-11-07 00:35:25,204 [ scc.config] DEBUG Found github.token 2024-11-07 00:35:25,207 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-11-07 00:35:25,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-07 00:35:25,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-07 00:35:26,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-11-07 00:35:26,175 [ scc.gh] DEBUG 4998 remaining from 5000 (Reset at 01:11 2024-11-07 00:35:26,175 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-07 00:35:26,180 [ scc.git] DEBUG Check current status 2024-11-07 00:35:26,180 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-07 00:35:26,183 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1 2024-11-07 00:35:26,183 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-07 00:35:26,219 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-11-07 00:35:26,222 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-11-07 00:35:26,225 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac) 2024-11-07 00:35:26,229 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe) 2024-11-07 00:35:26,232 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f) 2024-11-07 00:35:26,236 [ scc.config] DEBUG Found remote.origin.url 2024-11-07 00:35:26,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2024-11-07 00:35:27,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-07 00:35:27,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-07 00:35:27,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-07 00:35:28,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-07 00:35:28,298 [ scc.git] DEBUG Resetting... 2024-11-07 00:35:28,298 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-11-07 00:35:28,304 [ scc.git] DEBUG HEAD is now at e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1 2024-11-07 00:35:28,304 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-11-07 00:35:28,357 [ scc.git] DEBUG Check current status 2024-11-07 00:35:28,357 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-07 00:35:28,362 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1 2024-11-07 00:35:28,362 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-07 00:35:28,403 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-11-07 00:35:28,406 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-11-07 00:35:28,410 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac) 2024-11-07 00:35:28,413 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe) 2024-11-07 00:35:28,417 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f) 2024-11-07 00:35:28,418 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-11-07 00:35:28,418 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-11-07 00:35:28,418 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-11-07 00:35:28,418 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-11-07 00:35:28,418 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-11-07 00:35:28,418 [ scc.repo] DEBUG ## PRs found: 2024-11-07 00:35:28,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None 2024-11-07 00:35:29,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/294 HTTP/1.1" 200 None 2024-11-07 00:35:29,199 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-07 00:35:29,199 [ scc.repo] DEBUG - PR 294 dependabot[bot] 'Bump omero-web from `da5b7d1` to `213bb61`' 2024-11-07 00:35:29,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None 2024-11-07 00:35:29,696 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-07 00:35:29,696 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`' 2024-11-07 00:35:29,696 [ scc.repo] DEBUG ## Branches found: 2024-11-07 00:35:29,696 [ scc.git] DEBUG Get sha1 of %s 2024-11-07 00:35:29,696 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:35:29,700 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-07 00:35:29,705 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-07 00:35:29,705 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-07 00:35:29,709 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-07 00:35:29,713 [ scc.git] DEBUG Already up to date. 2024-11-07 00:35:29,714 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head' 2024-11-07 00:35:30,027 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2024-11-07 00:35:30,027 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD 2024-11-07 00:35:30,032 [ scc.git] DEBUG Calling 'git fetch origin pull/294/head' 2024-11-07 00:35:30,316 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2024-11-07 00:35:30,316 [ scc.git] DEBUG * branch refs/pull/294/head -> FETCH_HEAD 2024-11-07 00:35:30,321 [ scc.git] DEBUG ## Unique users: [] 2024-11-07 00:35:30,321 [ scc.git] DEBUG Get sha1 of %s 2024-11-07 00:35:30,322 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:35:30,327 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9' 2024-11-07 00:35:30,333 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:35:30,337 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9' 2024-11-07 00:35:30,345 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-07 00:35:30,347 [ scc.git] DEBUG omero-py | 2 +- 2024-11-07 00:35:30,348 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-11-07 00:35:30,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-07 00:35:30,484 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...587bd8c5de8d393fbed353cefde81f5bad4ea13a' 2024-11-07 00:35:30,497 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:35:30,501 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 294 (Bump omero-web from `da5b7d1` to `213bb61`) 587bd8c5de8d393fbed353cefde81f5bad4ea13a' 2024-11-07 00:35:30,512 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-07 00:35:30,515 [ scc.git] DEBUG omero-web | 2 +- 2024-11-07 00:35:30,515 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-11-07 00:35:30,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-07 00:35:30,859 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-07 00:35:31,019 [ scc.git] DEBUG Submodule path 'omero-py': checked out '4fd72efaa8cdbec9da98e1d28678af16878a86ba' 2024-11-07 00:35:31,111 [ scc.git] DEBUG Submodule path 'omero-web': checked out '213bb61adc23aed4a750f2a83dc94b7efdb22cee' 2024-11-07 00:35:31,112 [ scc.git] DEBUG Get sha1 of %s 2024-11-07 00:35:31,112 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:35:31,115 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-07 00:35:31,278 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f334c03cee0> has no local changes 2024-11-07 00:35:31,278 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Merged PRs: - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`' - PR 294 dependabot[bot] 'Bump omero-web from `da5b7d1` to `213bb61`' Generated by OMERO-python-superbuild-push#224 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/224/)' 2024-11-07 00:35:31,305 [ scc.git] DEBUG [detached HEAD 7e4d3a8] merge master -Dorg -Snone 2024-11-07 00:35:31,306 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2024-11-07 00:35:31,306 [ scc.merge] INFO Already up to date. 2024-11-07 00:35:31,306 [ scc.merge] INFO 2024-11-07 00:35:31,306 [ scc.merge] INFO Merged PRs: 2024-11-07 00:35:31,306 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`' 2024-11-07 00:35:31,306 [ scc.merge] INFO - PR 294 dependabot[bot] 'Bump omero-web from `da5b7d1` to `213bb61`' 2024-11-07 00:35:31,306 [ scc.merge] INFO 2024-11-07 00:35:31,306 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-11-07 00:35:31,306 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2024-11-07 00:35:33,406 [ scc.config] DEBUG Found github.token 2024-11-07 00:35:33,408 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-11-07 00:35:33,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-07 00:35:33,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-07 00:35:34,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-11-07 00:35:34,343 [ scc.gh] DEBUG 4986 remaining from 5000 (Reset at 01:11 2024-11-07 00:35:34,344 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-07 00:35:34,348 [ scc.git] DEBUG Check current status 2024-11-07 00:35:34,348 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-07 00:35:34,352 [ scc.git] DEBUG 7e4d3a8 merge master -Dorg -Snone 2024-11-07 00:35:34,352 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-07 00:35:34,391 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-11-07 00:35:34,394 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-11-07 00:35:34,397 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa) 2024-11-07 00:35:34,401 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe) 2024-11-07 00:35:34,409 [ scc.git] DEBUG 213bb61adc23aed4a750f2a83dc94b7efdb22cee omero-web (v5.27.2-7-g213bb61ad) 2024-11-07 00:35:34,413 [ scc.config] DEBUG Found remote.origin.url 2024-11-07 00:35:34,414 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-11-07 00:35:34,415 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2024-11-07 00:35:34,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2024-11-07 00:35:35,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-07 00:35:35,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-07 00:35:36,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-07 00:35:36,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-07 00:35:36,492 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-07 00:35:36,537 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-11-07 00:35:36,537 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-07 00:35:36,540 [ scc.git] DEBUG Check current status 2024-11-07 00:35:36,541 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-07 00:35:36,544 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0 2024-11-07 00:35:36,544 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-07 00:35:36,584 [ scc.config] DEBUG Found remote.origin.url 2024-11-07 00:35:37,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2024-11-07 00:35:37,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-07 00:35:37,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-07 00:35:38,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-07 00:35:38,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-07 00:35:38,712 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-07 00:35:38,748 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-07 00:35:38,749 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-11-07 00:35:38,750 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-07 00:35:38,754 [ scc.git] DEBUG Check current status 2024-11-07 00:35:38,754 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-07 00:35:38,758 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312 2024-11-07 00:35:38,758 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-07 00:35:38,796 [ scc.config] DEBUG Found remote.origin.url 2024-11-07 00:35:39,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2024-11-07 00:35:39,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-07 00:35:40,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-07 00:35:40,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-07 00:35:40,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-07 00:35:40,915 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-07 00:35:40,951 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-07 00:35:40,952 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-11-07 00:35:40,952 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-07 00:35:40,956 [ scc.git] DEBUG Check current status 2024-11-07 00:35:40,956 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-07 00:35:40,988 [ scc.git] DEBUG 4fd72efa Bump version: 5.19.5 → 5.19.6.dev0 2024-11-07 00:35:40,988 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-07 00:35:41,028 [ scc.config] DEBUG Found remote.origin.url 2024-11-07 00:35:41,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2024-11-07 00:35:41,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-07 00:35:42,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-07 00:35:42,694 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-07 00:35:43,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-07 00:35:43,148 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-07 00:35:43,192 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-07 00:35:43,193 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-11-07 00:35:43,193 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-07 00:35:43,199 [ scc.git] DEBUG Check current status 2024-11-07 00:35:43,199 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-07 00:35:43,255 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-11-07 00:35:43,256 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-07 00:35:43,297 [ scc.config] DEBUG Found remote.origin.url 2024-11-07 00:35:43,298 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-11-07 00:35:43,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2024-11-07 00:35:44,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-07 00:35:44,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-07 00:35:44,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-07 00:35:45,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-07 00:35:45,279 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-07 00:35:45,318 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-07 00:35:45,320 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-11-07 00:35:45,320 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-07 00:35:45,324 [ scc.git] DEBUG Check current status 2024-11-07 00:35:45,324 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-07 00:35:45,329 [ scc.git] DEBUG 213bb61ad Merge pull request #580 from sbesson/obj_id_mask_no_match 2024-11-07 00:35:45,329 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-07 00:35:45,370 [ scc.config] DEBUG Found remote.origin.url 2024-11-07 00:35:45,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2024-11-07 00:35:46,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-07 00:35:46,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-07 00:35:47,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-07 00:35:47,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-07 00:35:47,412 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-07 00:35:47,449 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-07 00:35:47,450 [ scc.git] DEBUG Resetting... 2024-11-07 00:35:47,450 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-11-07 00:35:47,456 [ scc.git] DEBUG HEAD is now at 7e4d3a8 merge master -Dorg -Snone 2024-11-07 00:35:47,457 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-11-07 00:35:47,505 [ scc.git] DEBUG Check current status 2024-11-07 00:35:47,506 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-07 00:35:47,510 [ scc.git] DEBUG 7e4d3a8 merge master -Dorg -Snone 2024-11-07 00:35:47,511 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-07 00:35:47,547 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-11-07 00:35:47,550 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-11-07 00:35:47,553 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa) 2024-11-07 00:35:47,557 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe) 2024-11-07 00:35:47,560 [ scc.git] DEBUG 213bb61adc23aed4a750f2a83dc94b7efdb22cee omero-web (v5.27.2-7-g213bb61ad) 2024-11-07 00:35:47,561 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-11-07 00:35:47,561 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-11-07 00:35:47,561 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-11-07 00:35:47,561 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-11-07 00:35:47,561 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-11-07 00:35:47,561 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-11-07 00:35:47,562 [ scc.repo] DEBUG ## PRs found: 2024-11-07 00:35:47,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None 2024-11-07 00:35:48,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/294 HTTP/1.1" 200 None 2024-11-07 00:35:48,311 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-07 00:35:48,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/587bd8c5de8d393fbed353cefde81f5bad4ea13a HTTP/1.1" 200 None 2024-11-07 00:35:49,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/587bd8c5de8d393fbed353cefde81f5bad4ea13a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-07 00:35:49,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/587bd8c5de8d393fbed353cefde81f5bad4ea13a HTTP/1.1" 200 None 2024-11-07 00:35:50,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/587bd8c5de8d393fbed353cefde81f5bad4ea13a?per_page=1 HTTP/1.1" 200 2 2024-11-07 00:35:50,133 [ scc.repo] DEBUG - PR 294 dependabot[bot] 'Bump omero-web from `da5b7d1` to `213bb61`' 2024-11-07 00:35:50,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None 2024-11-07 00:35:50,604 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-07 00:35:51,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None 2024-11-07 00:35:51,608 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-07 00:35:52,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None 2024-11-07 00:35:52,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/9660559833988d271074de56e54f2462a7be74e9?per_page=1 HTTP/1.1" 200 2 2024-11-07 00:35:52,534 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`' 2024-11-07 00:35:52,534 [ scc.repo] DEBUG ## Branches found: 2024-11-07 00:35:52,534 [ scc.git] DEBUG Get sha1 of %s 2024-11-07 00:35:52,534 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:35:52,539 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-07 00:35:52,543 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-07 00:35:52,544 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-07 00:35:52,549 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-07 00:35:52,554 [ scc.git] DEBUG Already up to date. 2024-11-07 00:35:52,554 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head' 2024-11-07 00:35:52,869 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2024-11-07 00:35:52,869 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD 2024-11-07 00:35:52,875 [ scc.git] DEBUG Calling 'git fetch origin pull/294/head' 2024-11-07 00:35:53,150 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2024-11-07 00:35:53,150 [ scc.git] DEBUG * branch refs/pull/294/head -> FETCH_HEAD 2024-11-07 00:35:53,154 [ scc.git] DEBUG ## Unique users: [] 2024-11-07 00:35:53,154 [ scc.git] DEBUG Get sha1 of %s 2024-11-07 00:35:53,155 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:35:53,159 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9' 2024-11-07 00:35:53,164 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:35:53,168 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9' 2024-11-07 00:35:53,172 [ scc.git] DEBUG Already up to date. 2024-11-07 00:35:53,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-07 00:35:53,333 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...587bd8c5de8d393fbed353cefde81f5bad4ea13a' 2024-11-07 00:35:53,338 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:35:53,342 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 294 (Bump omero-web from `da5b7d1` to `213bb61`) 587bd8c5de8d393fbed353cefde81f5bad4ea13a' 2024-11-07 00:35:53,346 [ scc.git] DEBUG Already up to date. 2024-11-07 00:35:53,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-07 00:35:53,716 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-07 00:35:53,756 [ scc.git] DEBUG Get sha1 of %s 2024-11-07 00:35:53,757 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:35:53,761 [ scc.repo] DEBUG ## PRs found: 2024-11-07 00:35:54,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2024-11-07 00:35:54,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2024-11-07 00:35:55,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2024-11-07 00:35:55,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2024-11-07 00:35:56,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-07 00:35:56,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2024-11-07 00:35:56,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2024-11-07 00:35:56,959 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2024-11-07 00:35:56,959 [ scc.repo] DEBUG ## Branches found: 2024-11-07 00:35:56,959 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-11-07 00:35:56,960 [ scc.git] DEBUG Get sha1 of %s 2024-11-07 00:35:56,960 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:35:56,965 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-07 00:35:56,969 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-07 00:35:56,969 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-07 00:35:56,973 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-07 00:35:56,978 [ scc.git] DEBUG Already up to date. 2024-11-07 00:35:56,978 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2024-11-07 00:35:57,301 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2024-11-07 00:35:57,301 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2024-11-07 00:35:57,305 [ scc.git] DEBUG ## Unique users: [] 2024-11-07 00:35:57,305 [ scc.git] DEBUG Get sha1 of %s 2024-11-07 00:35:57,305 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:35:57,310 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2024-11-07 00:35:57,315 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:35:57,319 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2024-11-07 00:35:57,680 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2024-11-07 00:35:57,680 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2024-11-07 00:35:57,680 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2024-11-07 00:35:57,680 [ scc.git] DEBUG Auto-merging src/fsLists.py 2024-11-07 00:35:57,680 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2024-11-07 00:35:57,680 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2024-11-07 00:35:57,680 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2024-11-07 00:35:57,680 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2024-11-07 00:35:57,680 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2024-11-07 00:35:57,681 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-07 00:35:57,685 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2024-11-07 00:35:57,685 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2024-11-07 00:35:57,685 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2024-11-07 00:35:57,685 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2024-11-07 00:35:57,685 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2024-11-07 00:35:57,685 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2024-11-07 00:35:57,685 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2024-11-07 00:35:57,685 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2024-11-07 00:35:57,685 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2024-11-07 00:35:57,685 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2024-11-07 00:35:57,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-07 00:35:57,816 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-07 00:35:57,857 [ scc.git] DEBUG Get sha1 of %s 2024-11-07 00:35:57,857 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:35:57,861 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-07 00:35:57,900 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-07 00:35:57,906 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f822a08cf40> has no local changes 2024-11-07 00:35:57,907 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Generated by OMERO-python-superbuild-push#224 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/224/)' 2024-11-07 00:35:57,915 [ scc.git] DEBUG [detached HEAD 8c42f55] merge master -Dorg -Ssuccess-only 2024-11-07 00:35:57,915 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-07 00:35:57,915 [ scc.repo] DEBUG ## PRs found: 2024-11-07 00:35:58,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2024-11-07 00:35:58,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2024-11-07 00:35:59,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2024-11-07 00:35:59,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2024-11-07 00:36:00,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-07 00:36:00,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2024-11-07 00:36:01,012 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2024-11-07 00:36:01,013 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2024-11-07 00:36:01,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2024-11-07 00:36:01,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2024-11-07 00:36:02,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2024-11-07 00:36:02,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2024-11-07 00:36:02,857 [ scc.repo] DEBUG ## Branches found: 2024-11-07 00:36:02,857 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-11-07 00:36:02,857 [ scc.git] DEBUG Get sha1 of %s 2024-11-07 00:36:02,857 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:36:02,861 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-07 00:36:02,865 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-07 00:36:02,865 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-07 00:36:02,869 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-07 00:36:02,873 [ scc.git] DEBUG Already up to date. 2024-11-07 00:36:02,874 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2024-11-07 00:36:03,332 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2024-11-07 00:36:03,332 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2024-11-07 00:36:03,338 [ scc.git] DEBUG ## Unique users: [] 2024-11-07 00:36:03,338 [ scc.git] DEBUG Get sha1 of %s 2024-11-07 00:36:03,338 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:36:03,343 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2024-11-07 00:36:03,349 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:36:03,353 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2024-11-07 00:36:03,364 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2024-11-07 00:36:03,365 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-07 00:36:03,367 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2024-11-07 00:36:03,367 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2024-11-07 00:36:03,368 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2024-11-07 00:36:03,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-07 00:36:03,500 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-07 00:36:03,540 [ scc.git] DEBUG Get sha1 of %s 2024-11-07 00:36:03,540 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:36:03,544 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-07 00:36:03,585 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-07 00:36:03,591 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f822ae31e50> has no local changes 2024-11-07 00:36:03,591 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Generated by OMERO-python-superbuild-push#224 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/224/)' 2024-11-07 00:36:03,599 [ scc.git] DEBUG [detached HEAD bb6bbfe] merge master -Dorg -Ssuccess-only 2024-11-07 00:36:03,600 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-07 00:36:03,600 [ scc.repo] DEBUG ## PRs found: 2024-11-07 00:36:04,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2024-11-07 00:36:04,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/431 HTTP/1.1" 200 None 2024-11-07 00:36:05,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None 2024-11-07 00:36:05,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-07 00:36:06,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-07 00:36:06,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None 2024-11-07 00:36:07,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0e500ec05bf9227b66b28a480b40e0936241d953?per_page=1 HTTP/1.1" 200 None 2024-11-07 00:36:07,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None 2024-11-07 00:36:08,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/status HTTP/1.1" 200 None 2024-11-07 00:36:08,100 [ scc.repo] DEBUG - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers' 2024-11-07 00:36:08,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/429 HTTP/1.1" 200 None 2024-11-07 00:36:09,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427 HTTP/1.1" 200 None 2024-11-07 00:36:09,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427/comments HTTP/1.1" 200 None 2024-11-07 00:36:09,471 [ scc.repo] DEBUG # ... Include label: include 2024-11-07 00:36:09,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None 2024-11-07 00:36:10,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-07 00:36:10,950 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-07 00:36:11,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None 2024-11-07 00:36:11,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1?per_page=1 HTTP/1.1" 200 None 2024-11-07 00:36:12,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None 2024-11-07 00:36:12,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/status HTTP/1.1" 200 None 2024-11-07 00:36:12,707 [ scc.repo] DEBUG - PR 427 Rdornier 'Add fileset folder creation' 2024-11-07 00:36:13,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None 2024-11-07 00:36:13,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None 2024-11-07 00:36:14,142 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2024-11-07 00:36:14,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-07 00:36:15,058 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-07 00:36:15,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2024-11-07 00:36:15,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None 2024-11-07 00:36:16,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2024-11-07 00:36:17,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None 2024-11-07 00:36:17,019 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method' 2024-11-07 00:36:17,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2024-11-07 00:36:17,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2024-11-07 00:36:18,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2024-11-07 00:36:18,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-07 00:36:19,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-07 00:36:19,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2024-11-07 00:36:20,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-11-07 00:36:20,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-07 00:36:21,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-07 00:36:21,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-11-07 00:36:22,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None 2024-11-07 00:36:22,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-11-07 00:36:23,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None 2024-11-07 00:36:23,024 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2024-11-07 00:36:23,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None 2024-11-07 00:36:23,486 [ scc.repo] DEBUG # ... Exclude label: exclude 2024-11-07 00:36:23,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None 2024-11-07 00:36:24,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None 2024-11-07 00:36:24,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None 2024-11-07 00:36:25,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-07 00:36:25,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None 2024-11-07 00:36:26,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2 2024-11-07 00:36:26,300 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs' 2024-11-07 00:36:26,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2024-11-07 00:36:27,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2024-11-07 00:36:27,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-11-07 00:36:28,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-07 00:36:28,698 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-07 00:36:29,180 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-11-07 00:36:29,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None 2024-11-07 00:36:30,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-11-07 00:36:30,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None 2024-11-07 00:36:30,487 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2024-11-07 00:36:30,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None 2024-11-07 00:36:31,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None 2024-11-07 00:36:31,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2024-11-07 00:36:32,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2024-11-07 00:36:32,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None 2024-11-07 00:36:33,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-07 00:36:33,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None 2024-11-07 00:36:34,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2 2024-11-07 00:36:34,123 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj' 2024-11-07 00:36:34,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None 2024-11-07 00:36:35,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None 2024-11-07 00:36:35,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-07 00:36:36,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None 2024-11-07 00:36:36,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2 2024-11-07 00:36:36,407 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins' 2024-11-07 00:36:36,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None 2024-11-07 00:36:37,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None 2024-11-07 00:36:37,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None 2024-11-07 00:36:38,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-07 00:36:38,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None 2024-11-07 00:36:39,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2 2024-11-07 00:36:39,257 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error' 2024-11-07 00:36:39,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2024-11-07 00:36:40,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2024-11-07 00:36:40,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2024-11-07 00:36:41,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-07 00:36:41,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2024-11-07 00:36:42,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2024-11-07 00:36:42,086 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2024-11-07 00:36:42,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None 2024-11-07 00:36:42,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None 2024-11-07 00:36:43,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None 2024-11-07 00:36:43,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None 2024-11-07 00:36:43,922 [ scc.repo] DEBUG ## Branches found: 2024-11-07 00:36:43,922 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-11-07 00:36:43,923 [ scc.git] DEBUG Get sha1 of %s 2024-11-07 00:36:43,923 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:36:43,929 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-07 00:36:43,932 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-07 00:36:43,933 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-07 00:36:43,938 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-07 00:36:43,943 [ scc.git] DEBUG Already up to date. 2024-11-07 00:36:43,943 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2024-11-07 00:36:44,369 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-11-07 00:36:44,369 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2024-11-07 00:36:44,375 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head' 2024-11-07 00:36:44,995 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-11-07 00:36:44,995 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD 2024-11-07 00:36:45,000 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head' 2024-11-07 00:36:45,315 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-11-07 00:36:45,316 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD 2024-11-07 00:36:45,321 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head' 2024-11-07 00:36:45,628 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-11-07 00:36:45,628 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD 2024-11-07 00:36:45,636 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2024-11-07 00:36:46,094 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-11-07 00:36:46,094 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2024-11-07 00:36:46,098 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head' 2024-11-07 00:36:46,461 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-11-07 00:36:46,461 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD 2024-11-07 00:36:46,466 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2024-11-07 00:36:46,765 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-11-07 00:36:46,765 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2024-11-07 00:36:46,770 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2024-11-07 00:36:47,253 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-11-07 00:36:47,253 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2024-11-07 00:36:47,258 [ scc.git] DEBUG Calling 'git fetch origin pull/427/head' 2024-11-07 00:36:47,983 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-11-07 00:36:47,984 [ scc.git] DEBUG * branch refs/pull/427/head -> FETCH_HEAD 2024-11-07 00:36:47,988 [ scc.git] DEBUG Calling 'git fetch origin pull/431/head' 2024-11-07 00:36:48,318 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-11-07 00:36:48,318 [ scc.git] DEBUG * branch refs/pull/431/head -> FETCH_HEAD 2024-11-07 00:36:48,323 [ scc.git] DEBUG ## Unique users: [] 2024-11-07 00:36:48,323 [ scc.git] DEBUG Get sha1 of %s 2024-11-07 00:36:48,323 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:36:48,327 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2024-11-07 00:36:48,338 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:36:48,342 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2024-11-07 00:36:48,515 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2024-11-07 00:36:48,516 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2024-11-07 00:36:48,516 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-07 00:36:48,521 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2024-11-07 00:36:48,521 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2024-11-07 00:36:48,521 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2024-11-07 00:36:48,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-07 00:36:48,654 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb' 2024-11-07 00:36:48,666 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:36:48,671 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb' 2024-11-07 00:36:48,980 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2024-11-07 00:36:48,981 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py 2024-11-07 00:36:48,981 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-07 00:36:48,988 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------ 2024-11-07 00:36:48,989 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++ 2024-11-07 00:36:48,989 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-) 2024-11-07 00:36:49,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-07 00:36:49,127 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f' 2024-11-07 00:36:49,140 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:36:49,145 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f' 2024-11-07 00:36:49,189 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py 2024-11-07 00:36:49,190 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-07 00:36:49,193 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++---- 2024-11-07 00:36:49,193 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-) 2024-11-07 00:36:49,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-07 00:36:49,504 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a' 2024-11-07 00:36:49,517 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:36:49,522 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a' 2024-11-07 00:36:49,565 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py 2024-11-07 00:36:49,565 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py 2024-11-07 00:36:49,566 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-07 00:36:49,570 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++- 2024-11-07 00:36:49,570 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +- 2024-11-07 00:36:49,570 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-) 2024-11-07 00:36:49,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-07 00:36:49,902 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2024-11-07 00:36:49,915 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:36:49,920 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2024-11-07 00:36:49,996 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-07 00:36:49,999 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2024-11-07 00:36:49,999 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2024-11-07 00:36:49,999 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2024-11-07 00:36:49,999 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2024-11-07 00:36:49,999 [ scc.git] DEBUG create mode 100644 connect.py 2024-11-07 00:36:50,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-07 00:36:50,284 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5' 2024-11-07 00:36:50,297 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:36:50,301 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5' 2024-11-07 00:36:50,357 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py 2024-11-07 00:36:50,358 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-07 00:36:50,361 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++ 2024-11-07 00:36:50,361 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-11-07 00:36:50,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-07 00:36:50,670 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2024-11-07 00:36:50,682 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:36:50,686 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2024-11-07 00:36:50,722 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2024-11-07 00:36:50,723 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-07 00:36:50,726 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2024-11-07 00:36:50,726 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2024-11-07 00:36:51,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-07 00:36:51,066 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2024-11-07 00:36:51,078 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:36:51,083 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2024-11-07 00:36:51,307 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2024-11-07 00:36:51,308 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-07 00:36:51,315 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------ 2024-11-07 00:36:51,316 [ scc.git] DEBUG 1 file changed, 36 deletions(-) 2024-11-07 00:36:51,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-07 00:36:51,457 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1' 2024-11-07 00:36:51,470 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:36:51,474 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 427 (Add fileset folder creation) ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1' 2024-11-07 00:36:51,641 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-07 00:36:51,645 [ scc.git] DEBUG .gitignore | 1 + 2024-11-07 00:36:51,645 [ scc.git] DEBUG src/omero/plugins/download.py | 17 ++++++++++++----- 2024-11-07 00:36:51,645 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 5 deletions(-) 2024-11-07 00:36:51,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-07 00:36:51,835 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0e500ec05bf9227b66b28a480b40e0936241d953' 2024-11-07 00:36:51,849 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:36:51,854 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 431 (omero.HdfStorage.update: add size check on data.rowNumbers) 0e500ec05bf9227b66b28a480b40e0936241d953' 2024-11-07 00:36:51,955 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-07 00:36:51,958 [ scc.git] DEBUG src/omero/hdfstorageV2.py | 1 + 2024-11-07 00:36:51,958 [ scc.git] DEBUG 1 file changed, 1 insertion(+) 2024-11-07 00:36:52,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-07 00:36:52,225 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-07 00:36:52,267 [ scc.git] DEBUG Get sha1 of %s 2024-11-07 00:36:52,268 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:36:52,272 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-07 00:36:52,311 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-07 00:36:52,320 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8229043e80> has no local changes 2024-11-07 00:36:52,321 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 387 will-moore 'Numpy pixels type' (label: exclude) - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 207 manics 'BlitzGateway.connect raise on error' - PR 266 joshmoore 'errors: use raise_error from cli plugins' - PR 299 joshmoore 'Add parents and children to omero obj' - PR 332 jburel 'Build conda' - PR 337 will-moore 'bulk.yml depth is passed to xargs' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 427 Rdornier 'Add fileset folder creation' - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers' Generated by OMERO-python-superbuild-push#224 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/224/)' 2024-11-07 00:36:52,330 [ scc.git] DEBUG [detached HEAD d92a1b11] merge master -Dorg -Ssuccess-only 2024-11-07 00:36:52,330 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-07 00:36:52,330 [ scc.git] INFO Overriding base-branch from master to develop 2024-11-07 00:36:52,331 [ scc.repo] DEBUG ## PRs found: 2024-11-07 00:36:52,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-11-07 00:36:53,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2024-11-07 00:36:53,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2024-11-07 00:36:54,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-11-07 00:36:54,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-07 00:36:55,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-07 00:36:55,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-11-07 00:36:56,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2024-11-07 00:36:56,210 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-11-07 00:36:56,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-11-07 00:36:57,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-11-07 00:36:57,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545/issues/216/comments?page=2 HTTP/1.1" 200 None 2024-11-07 00:36:58,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-11-07 00:36:58,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-11-07 00:36:59,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-11-07 00:36:59,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-11-07 00:37:00,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-11-07 00:37:00,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-07 00:37:01,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-11-07 00:37:01,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-11-07 00:37:01,530 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-11-07 00:37:01,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-11-07 00:37:02,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-11-07 00:37:02,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-11-07 00:37:03,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-11-07 00:37:03,481 [ scc.repo] DEBUG ## Branches found: 2024-11-07 00:37:03,482 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-11-07 00:37:03,482 [ scc.git] DEBUG Get sha1 of %s 2024-11-07 00:37:03,482 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:37:03,486 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-11-07 00:37:03,490 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-07 00:37:03,490 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-11-07 00:37:03,494 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-11-07 00:37:03,498 [ scc.git] DEBUG Already up to date. 2024-11-07 00:37:03,498 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-11-07 00:37:03,890 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2024-11-07 00:37:03,891 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-11-07 00:37:03,896 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2024-11-07 00:37:04,190 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2024-11-07 00:37:04,190 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2024-11-07 00:37:04,194 [ scc.git] DEBUG ## Unique users: [] 2024-11-07 00:37:04,194 [ scc.git] DEBUG Get sha1 of %s 2024-11-07 00:37:04,194 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:37:04,198 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-11-07 00:37:04,204 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:37:04,209 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-11-07 00:37:04,504 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-11-07 00:37:04,504 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-11-07 00:37:04,504 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-11-07 00:37:04,505 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-11-07 00:37:04,512 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0' 2024-11-07 00:37:04,517 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-11-07 00:37:04,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-07 00:37:04,650 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-11-07 00:37:04,657 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0' 2024-11-07 00:37:04,661 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#224](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/224/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/224/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-11-07 00:37:04,665 [ scc.config] DEBUG Found github.token 2024-11-07 00:37:04,665 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-11-07 00:37:04,665 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-11-07 00:37:04,669 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:37:04,672 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-11-07 00:37:04,740 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-07 00:37:04,743 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2024-11-07 00:37:04,743 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-11-07 00:37:05,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-07 00:37:05,048 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-07 00:37:05,088 [ scc.git] DEBUG Get sha1 of %s 2024-11-07 00:37:05,089 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:37:05,093 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-07 00:37:05,129 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-07 00:37:05,134 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8228ff4640> has no local changes 2024-11-07 00:37:05,134 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#224 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/224/)' 2024-11-07 00:37:05,143 [ scc.git] DEBUG [detached HEAD 9f1873d] merge master -Dorg -Ssuccess-only 2024-11-07 00:37:05,143 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-07 00:37:05,143 [ scc.repo] DEBUG ## PRs found: 2024-11-07 00:37:05,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2024-11-07 00:37:06,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/594 HTTP/1.1" 200 None 2024-11-07 00:37:06,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6bba7f773bb6c4217607439f9adab8814bcd0ac6 HTTP/1.1" 200 None 2024-11-07 00:37:07,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6bba7f773bb6c4217607439f9adab8814bcd0ac6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-07 00:37:07,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6bba7f773bb6c4217607439f9adab8814bcd0ac6/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-07 00:37:08,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6bba7f773bb6c4217607439f9adab8814bcd0ac6 HTTP/1.1" 200 None 2024-11-07 00:37:08,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/6bba7f773bb6c4217607439f9adab8814bcd0ac6?per_page=1 HTTP/1.1" 200 None 2024-11-07 00:37:09,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6bba7f773bb6c4217607439f9adab8814bcd0ac6 HTTP/1.1" 200 None 2024-11-07 00:37:09,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6bba7f773bb6c4217607439f9adab8814bcd0ac6/status HTTP/1.1" 200 None 2024-11-07 00:37:09,504 [ scc.repo] DEBUG - PR 594 knabar 'Add minimum batch size to avoid infinite loop due to zero batch size' 2024-11-07 00:37:09,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/592 HTTP/1.1" 200 None 2024-11-07 00:37:10,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/721002a9ad481311a44d093e26641344492e149c HTTP/1.1" 200 None 2024-11-07 00:37:11,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/721002a9ad481311a44d093e26641344492e149c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-07 00:37:11,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/721002a9ad481311a44d093e26641344492e149c/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-07 00:37:12,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/721002a9ad481311a44d093e26641344492e149c HTTP/1.1" 200 None 2024-11-07 00:37:12,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/721002a9ad481311a44d093e26641344492e149c?per_page=1 HTTP/1.1" 200 None 2024-11-07 00:37:12,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/721002a9ad481311a44d093e26641344492e149c HTTP/1.1" 200 None 2024-11-07 00:37:13,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/721002a9ad481311a44d093e26641344492e149c/status HTTP/1.1" 200 None 2024-11-07 00:37:13,308 [ scc.repo] DEBUG - PR 592 jburel 'Replace pkg_resources' 2024-11-07 00:37:13,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/591 HTTP/1.1" 200 None 2024-11-07 00:37:14,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8a54f0347e7174a744c4c210d0734effd029acbe HTTP/1.1" 200 None 2024-11-07 00:37:14,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8a54f0347e7174a744c4c210d0734effd029acbe/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-07 00:37:15,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8a54f0347e7174a744c4c210d0734effd029acbe/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-07 00:37:15,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8a54f0347e7174a744c4c210d0734effd029acbe HTTP/1.1" 200 None 2024-11-07 00:37:16,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/8a54f0347e7174a744c4c210d0734effd029acbe?per_page=1 HTTP/1.1" 200 None 2024-11-07 00:37:16,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8a54f0347e7174a744c4c210d0734effd029acbe HTTP/1.1" 200 None 2024-11-07 00:37:16,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8a54f0347e7174a744c4c210d0734effd029acbe/status HTTP/1.1" 200 None 2024-11-07 00:37:16,919 [ scc.repo] DEBUG - PR 591 jburel 'Action update' 2024-11-07 00:37:17,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/590 HTTP/1.1" 200 None 2024-11-07 00:37:17,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b62eb79447919619888bd28ee4e264f7b744f314 HTTP/1.1" 200 None 2024-11-07 00:37:18,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b62eb79447919619888bd28ee4e264f7b744f314/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-07 00:37:18,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b62eb79447919619888bd28ee4e264f7b744f314/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-07 00:37:19,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b62eb79447919619888bd28ee4e264f7b744f314 HTTP/1.1" 200 None 2024-11-07 00:37:19,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/b62eb79447919619888bd28ee4e264f7b744f314?per_page=1 HTTP/1.1" 200 None 2024-11-07 00:37:20,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b62eb79447919619888bd28ee4e264f7b744f314 HTTP/1.1" 200 None 2024-11-07 00:37:20,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b62eb79447919619888bd28ee4e264f7b744f314/status HTTP/1.1" 200 None 2024-11-07 00:37:20,654 [ scc.repo] DEBUG - PR 590 knabar 'Update changelog' 2024-11-07 00:37:21,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/585 HTTP/1.1" 200 None 2024-11-07 00:37:21,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/583 HTTP/1.1" 200 None 2024-11-07 00:37:22,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/583/comments HTTP/1.1" 200 None 2024-11-07 00:37:22,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/dd2879608e047a7d71a648a23e6955ce591950fd HTTP/1.1" 200 None 2024-11-07 00:37:23,143 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/dd2879608e047a7d71a648a23e6955ce591950fd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-07 00:37:23,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/dd2879608e047a7d71a648a23e6955ce591950fd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-07 00:37:24,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/dd2879608e047a7d71a648a23e6955ce591950fd HTTP/1.1" 200 None 2024-11-07 00:37:24,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/dd2879608e047a7d71a648a23e6955ce591950fd?per_page=1 HTTP/1.1" 200 None 2024-11-07 00:37:24,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/dd2879608e047a7d71a648a23e6955ce591950fd HTTP/1.1" 200 None 2024-11-07 00:37:25,326 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/dd2879608e047a7d71a648a23e6955ce591950fd/status HTTP/1.1" 200 None 2024-11-07 00:37:25,327 [ scc.repo] DEBUG - PR 583 DavidStirling 'Allow users to click a group name to quick-switch to that group' 2024-11-07 00:37:25,808 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581 HTTP/1.1" 200 None 2024-11-07 00:37:26,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581/comments HTTP/1.1" 200 None 2024-11-07 00:37:26,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2024-11-07 00:37:27,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None 2024-11-07 00:37:27,610 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2024-11-07 00:37:28,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2024-11-07 00:37:28,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-11-07 00:37:29,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-07 00:37:29,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-07 00:37:30,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-11-07 00:37:30,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None 2024-11-07 00:37:30,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-11-07 00:37:31,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None 2024-11-07 00:37:31,406 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2024-11-07 00:37:31,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2024-11-07 00:37:32,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2024-11-07 00:37:32,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-11-07 00:37:33,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-07 00:37:33,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-07 00:37:34,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-11-07 00:37:34,827 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None 2024-11-07 00:37:35,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-11-07 00:37:35,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None 2024-11-07 00:37:35,728 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2024-11-07 00:37:36,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2024-11-07 00:37:36,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2024-11-07 00:37:37,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2024-11-07 00:37:37,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-07 00:37:38,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-07 00:37:38,149 [ scc.repo] DEBUG ## Branches found: 2024-11-07 00:37:38,149 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-11-07 00:37:38,149 [ scc.git] DEBUG Get sha1 of %s 2024-11-07 00:37:38,149 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:37:38,155 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-07 00:37:38,160 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-07 00:37:38,160 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-07 00:37:38,165 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-07 00:37:38,171 [ scc.git] DEBUG Already up to date. 2024-11-07 00:37:38,171 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2024-11-07 00:37:39,834 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-11-07 00:37:39,834 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2024-11-07 00:37:39,839 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2024-11-07 00:37:40,128 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-11-07 00:37:40,128 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2024-11-07 00:37:40,134 [ scc.git] DEBUG Calling 'git fetch origin pull/583/head' 2024-11-07 00:37:40,597 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-11-07 00:37:40,598 [ scc.git] DEBUG * branch refs/pull/583/head -> FETCH_HEAD 2024-11-07 00:37:40,603 [ scc.git] DEBUG Calling 'git fetch origin pull/590/head' 2024-11-07 00:37:40,898 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-11-07 00:37:40,898 [ scc.git] DEBUG * branch refs/pull/590/head -> FETCH_HEAD 2024-11-07 00:37:40,903 [ scc.git] DEBUG Calling 'git fetch origin pull/591/head' 2024-11-07 00:37:41,564 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-11-07 00:37:41,565 [ scc.git] DEBUG * branch refs/pull/591/head -> FETCH_HEAD 2024-11-07 00:37:41,571 [ scc.git] DEBUG Calling 'git fetch origin pull/592/head' 2024-11-07 00:37:41,982 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-11-07 00:37:41,982 [ scc.git] DEBUG * branch refs/pull/592/head -> FETCH_HEAD 2024-11-07 00:37:41,987 [ scc.git] DEBUG Calling 'git fetch origin pull/594/head' 2024-11-07 00:37:42,406 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-11-07 00:37:42,406 [ scc.git] DEBUG * branch refs/pull/594/head -> FETCH_HEAD 2024-11-07 00:37:42,409 [ scc.git] DEBUG ## Unique users: [] 2024-11-07 00:37:42,409 [ scc.git] DEBUG Get sha1 of %s 2024-11-07 00:37:42,409 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:37:42,414 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2024-11-07 00:37:42,422 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:37:42,427 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2024-11-07 00:37:42,546 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2024-11-07 00:37:42,547 [ scc.git] DEBUG Auto-merging setup.py 2024-11-07 00:37:42,548 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-07 00:37:42,552 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2024-11-07 00:37:42,552 [ scc.git] DEBUG setup.py | 1 + 2024-11-07 00:37:42,552 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2024-11-07 00:37:42,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-07 00:37:42,691 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2024-11-07 00:37:42,700 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:37:42,706 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2024-11-07 00:37:42,874 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2024-11-07 00:37:42,875 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2024-11-07 00:37:42,875 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-07 00:37:42,880 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2024-11-07 00:37:42,880 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2024-11-07 00:37:42,880 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2024-11-07 00:37:43,081 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-07 00:37:43,082 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dd2879608e047a7d71a648a23e6955ce591950fd' 2024-11-07 00:37:43,090 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:37:43,096 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 583 (Allow users to click a group name to quick-switch to that group) dd2879608e047a7d71a648a23e6955ce591950fd' 2024-11-07 00:37:43,236 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-07 00:37:43,239 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_content.html | 8 ++++++-- 2024-11-07 00:37:43,239 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_dropdown2.html | 2 -- 2024-11-07 00:37:43,240 [ scc.git] DEBUG 2 files changed, 6 insertions(+), 4 deletions(-) 2024-11-07 00:37:43,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-07 00:37:43,468 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b62eb79447919619888bd28ee4e264f7b744f314' 2024-11-07 00:37:43,477 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:37:43,482 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 590 (Update changelog) b62eb79447919619888bd28ee4e264f7b744f314' 2024-11-07 00:37:43,500 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-07 00:37:43,502 [ scc.git] DEBUG CHANGELOG.md | 15 +++++++++++++++ 2024-11-07 00:37:43,502 [ scc.git] DEBUG 1 file changed, 15 insertions(+) 2024-11-07 00:37:43,855 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-07 00:37:43,856 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8a54f0347e7174a744c4c210d0734effd029acbe' 2024-11-07 00:37:43,864 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:37:43,869 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 591 (Action update) 8a54f0347e7174a744c4c210d0734effd029acbe' 2024-11-07 00:37:44,156 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-07 00:37:44,160 [ scc.git] DEBUG .github/workflows/codeql-analysis.yml | 2 +- 2024-11-07 00:37:44,160 [ scc.git] DEBUG .github/workflows/install.yml | 4 ++-- 2024-11-07 00:37:44,160 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 6 +++--- 2024-11-07 00:37:44,160 [ scc.git] DEBUG .github/workflows/tox.yml | 4 ++-- 2024-11-07 00:37:44,160 [ scc.git] DEBUG .gitignore | 1 + 2024-11-07 00:37:44,160 [ scc.git] DEBUG 5 files changed, 9 insertions(+), 8 deletions(-) 2024-11-07 00:37:44,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-07 00:37:44,293 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...721002a9ad481311a44d093e26641344492e149c' 2024-11-07 00:37:44,301 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:37:44,305 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 592 (Replace pkg_resources) 721002a9ad481311a44d093e26641344492e149c' 2024-11-07 00:37:44,447 [ scc.git] DEBUG Auto-merging setup.py 2024-11-07 00:37:44,448 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-07 00:37:44,452 [ scc.git] DEBUG omero/plugins/web.py | 6 +++--- 2024-11-07 00:37:44,452 [ scc.git] DEBUG setup.py | 3 ++- 2024-11-07 00:37:44,452 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 4 deletions(-) 2024-11-07 00:37:44,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-07 00:37:44,672 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6bba7f773bb6c4217607439f9adab8814bcd0ac6' 2024-11-07 00:37:44,680 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:37:44,684 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 594 (Add minimum batch size to avoid infinite loop due to zero batch size) 6bba7f773bb6c4217607439f9adab8814bcd0ac6' 2024-11-07 00:37:44,703 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-07 00:37:44,706 [ scc.git] DEBUG omeroweb/webclient/templates/webclient/annotations/omero_table.html | 5 +++-- 2024-11-07 00:37:44,706 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 2 deletions(-) 2024-11-07 00:37:45,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-07 00:37:45,052 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-07 00:37:45,090 [ scc.git] DEBUG Get sha1 of %s 2024-11-07 00:37:45,091 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-07 00:37:45,099 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-07 00:37:45,136 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-07 00:37:45,146 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f8229002be0> has no local changes 2024-11-07 00:37:45,146 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 583 DavidStirling 'Allow users to click a group name to quick-switch to that group' - PR 590 knabar 'Update changelog' - PR 591 jburel 'Action update' - PR 592 jburel 'Replace pkg_resources' - PR 594 knabar 'Add minimum batch size to avoid infinite loop due to zero batch size' Generated by OMERO-python-superbuild-push#224 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/224/)' 2024-11-07 00:37:45,157 [ scc.git] DEBUG [detached HEAD 026ca14c5] merge master -Dorg -Ssuccess-only 2024-11-07 00:37:45,157 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-07 00:37:45,157 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-07 00:37:45,204 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2024-11-07 00:37:45,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-07 00:37:45,450 [ scc.config] DEBUG Found submodule.omero-marshal.url 2024-11-07 00:37:45,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-07 00:37:45,846 [ scc.config] DEBUG Found submodule.omero-py.url 2024-11-07 00:37:46,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-07 00:37:46,223 [ scc.config] DEBUG Found submodule.omero-scripts.url 2024-11-07 00:37:46,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-07 00:37:46,612 [ scc.config] DEBUG Found submodule.omero-web.url 2024-11-07 00:37:46,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-07 00:37:46,988 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-07 00:37:47,016 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f822a328a00> has local changes 2024-11-07 00:37:47,017 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Merged PRs: - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`' - PR 294 dependabot[bot] 'Bump omero-web from `da5b7d1` to `213bb61`' Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Repository: ome/omero-marshal Excluded PRs: - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Repository: ome/omero-py Excluded PRs: - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 387 will-moore 'Numpy pixels type' (label: exclude) - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 207 manics 'BlitzGateway.connect raise on error' - PR 266 joshmoore 'errors: use raise_error from cli plugins' - PR 299 joshmoore 'Add parents and children to omero obj' - PR 332 jburel 'Build conda' - PR 337 will-moore 'bulk.yml depth is passed to xargs' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 427 Rdornier 'Add fileset folder creation' - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers' Repository: ome/omero-scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 583 DavidStirling 'Allow users to click a group name to quick-switch to that group' - PR 590 knabar 'Update changelog' - PR 591 jburel 'Action update' - PR 592 jburel 'Replace pkg_resources' - PR 594 knabar 'Add minimum batch size to avoid infinite loop due to zero batch size' Generated by OMERO-python-superbuild-push#224 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/224/)' 2024-11-07 00:37:47,028 [ scc.git] DEBUG [detached HEAD 52c9213] merge master -Dorg -Ssuccess-only 2024-11-07 00:37:47,028 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2024-11-07 00:37:47,028 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2024-11-07 00:37:47,028 [ scc.merge] INFO Already up to date. 2024-11-07 00:37:47,028 [ scc.merge] INFO 2024-11-07 00:37:47,028 [ scc.merge] INFO Merged PRs: 2024-11-07 00:37:47,028 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`' 2024-11-07 00:37:47,029 [ scc.merge] INFO - PR 294 dependabot[bot] 'Bump omero-web from `da5b7d1` to `213bb61`' 2024-11-07 00:37:47,029 [ scc.merge] INFO 2024-11-07 00:37:47,029 [ scc.merge] INFO Repository: ome/omero-dropbox 2024-11-07 00:37:47,029 [ scc.merge] INFO Already up to date. 2024-11-07 00:37:47,029 [ scc.merge] INFO 2024-11-07 00:37:47,029 [ scc.merge] INFO Merged PRs: 2024-11-07 00:37:47,029 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2024-11-07 00:37:47,029 [ scc.merge] INFO 2024-11-07 00:37:47,029 [ scc.merge] INFO Repository: ome/omero-marshal 2024-11-07 00:37:47,029 [ scc.merge] INFO Excluded PRs: 2024-11-07 00:37:47,029 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2024-11-07 00:37:47,029 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2024-11-07 00:37:47,029 [ scc.merge] INFO Already up to date. 2024-11-07 00:37:47,029 [ scc.merge] INFO 2024-11-07 00:37:47,029 [ scc.merge] INFO Merged PRs: 2024-11-07 00:37:47,029 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2024-11-07 00:37:47,029 [ scc.merge] INFO 2024-11-07 00:37:47,029 [ scc.merge] INFO Repository: ome/omero-py 2024-11-07 00:37:47,030 [ scc.merge] INFO Excluded PRs: 2024-11-07 00:37:47,030 [ scc.merge] INFO - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller) 2024-11-07 00:37:47,030 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2024-11-07 00:37:47,030 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude) 2024-11-07 00:37:47,030 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) 2024-11-07 00:37:47,030 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) 2024-11-07 00:37:47,030 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) 2024-11-07 00:37:47,030 [ scc.merge] INFO Already up to date. 2024-11-07 00:37:47,030 [ scc.merge] INFO 2024-11-07 00:37:47,030 [ scc.merge] INFO Merged PRs: 2024-11-07 00:37:47,030 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2024-11-07 00:37:47,030 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error' 2024-11-07 00:37:47,030 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins' 2024-11-07 00:37:47,030 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' 2024-11-07 00:37:47,030 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2024-11-07 00:37:47,030 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs' 2024-11-07 00:37:47,030 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2024-11-07 00:37:47,031 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method' 2024-11-07 00:37:47,031 [ scc.merge] INFO - PR 427 Rdornier 'Add fileset folder creation' 2024-11-07 00:37:47,031 [ scc.merge] INFO - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers' 2024-11-07 00:37:47,031 [ scc.merge] INFO 2024-11-07 00:37:47,031 [ scc.merge] INFO Repository: ome/omero-scripts 2024-11-07 00:37:47,031 [ scc.merge] INFO Excluded PRs: 2024-11-07 00:37:47,031 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-11-07 00:37:47,031 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-11-07 00:37:47,031 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-11-07 00:37:47,031 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-11-07 00:37:47,031 [ scc.merge] INFO Already up to date. 2024-11-07 00:37:47,031 [ scc.merge] INFO 2024-11-07 00:37:47,031 [ scc.merge] INFO Merged PRs: 2024-11-07 00:37:47,031 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-11-07 00:37:47,031 [ scc.merge] INFO 2024-11-07 00:37:47,031 [ scc.merge] INFO Conflicting PRs (not included): 2024-11-07 00:37:47,031 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-11-07 00:37:47,031 [ scc.merge] INFO 2024-11-07 00:37:47,032 [ scc.merge] INFO Repository: ome/omero-web 2024-11-07 00:37:47,032 [ scc.merge] INFO Excluded PRs: 2024-11-07 00:37:47,032 [ scc.merge] INFO - PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-11-07 00:37:47,032 [ scc.merge] INFO - PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT) 2024-11-07 00:37:47,032 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2024-11-07 00:37:47,032 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) 2024-11-07 00:37:47,032 [ scc.merge] INFO Already up to date. 2024-11-07 00:37:47,032 [ scc.merge] INFO 2024-11-07 00:37:47,032 [ scc.merge] INFO Merged PRs: 2024-11-07 00:37:47,032 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2024-11-07 00:37:47,032 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2024-11-07 00:37:47,032 [ scc.merge] INFO - PR 583 DavidStirling 'Allow users to click a group name to quick-switch to that group' 2024-11-07 00:37:47,032 [ scc.merge] INFO - PR 590 knabar 'Update changelog' 2024-11-07 00:37:47,032 [ scc.merge] INFO - PR 591 jburel 'Action update' 2024-11-07 00:37:47,032 [ scc.merge] INFO - PR 592 jburel 'Replace pkg_resources' 2024-11-07 00:37:47,032 [ scc.merge] INFO - PR 594 knabar 'Add minimum batch size to avoid infinite loop due to zero batch size' 2024-11-07 00:37:47,032 [ scc.merge] INFO 2024-11-07 00:37:47,033 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-11-07 00:37:47,033 [ scc.git] DEBUG Calling 'git remote' 2024-11-07 00:37:47,039 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-11-07 00:37:47,039 [ scc.git] DEBUG Calling 'git remote' 2024-11-07 00:37:47,044 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-07 00:37:47,044 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-11-07 00:37:47,044 [ scc.git] DEBUG Calling 'git remote' 2024-11-07 00:37:47,052 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-07 00:37:47,052 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-11-07 00:37:47,052 [ scc.git] DEBUG Calling 'git remote' 2024-11-07 00:37:47,057 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-07 00:37:47,057 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-11-07 00:37:47,057 [ scc.git] DEBUG Calling 'git remote' 2024-11-07 00:37:47,062 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-07 00:37:47,063 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-11-07 00:37:47,063 [ scc.git] DEBUG Calling 'git remote' 2024-11-07 00:37:47,067 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen return opener.open(url, data, timeout) File "/usr/lib64/python3.9/urllib/request.py", line 523, in open response = meth(req, response) File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response response = self.parent.error( File "/usr/lib64/python3.9/urllib/request.py", line 561, in error return self._call_chain(*args) File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain result = func(*args) File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen return opener.open(url, data, timeout) File "/usr/lib64/python3.9/urllib/request.py", line 523, in open response = meth(req, response) File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response response = self.parent.error( File "/usr/lib64/python3.9/urllib/request.py", line 561, in error return self._call_chain(*args) File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain result = func(*args) File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from a4307f4 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from cca4c2f nothing to commit, working tree clean Entering 'omero-py' HEAD detached from 4fd72efa nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 312afbe nothing to commit, working tree clean Entering 'omero-web' HEAD detached from 213bb61ad nothing to commit, working tree clean HEAD detached from e849d72 nothing to commit, working tree clean 2024-11-07 00:38:14,649 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS