![[Jenkins]](/jenkins/static/d8ca237c/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 273 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master) > git config core.sparsecheckout # timeout=10 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 Commit message: "Merge pull request #17 from jburel/python3" > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision e849d7220735d67c4a474051cc03805d0a822cde (refs/remotes/origin/master) > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f e849d7220735d67c4a474051cc03805d0a822cde # timeout=10 Commit message: "Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1" > git rev-list --no-walk e849d7220735d67c4a474051cc03805d0a822cde # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 236 > git submodule update --init --recursive omero-marshal # timeout=10 > git submodule update --init --recursive omero-dropbox # timeout=10 > git submodule update --init --recursive omero-scripts # timeout=10 [Pipeline] sh + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-python-superbuild-push + python3 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + python3 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3) Collecting pip Using cached pip-24.3.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 21.2.3 Uninstalling pip-21.2.3: Successfully uninstalled pip-21.2.3 Successfully installed pip-24.3.1 + python3 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.5.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.9.0-py3-none-any.whl.metadata (3.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-43.0.3-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.4 kB) Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (34 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2024.8.30-py3-none-any.whl.metadata (2.2 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB) Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached PyGithub-2.5.0-py3-none-any.whl (375 kB) Using cached PyYAML-6.0.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (737 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.16.0-py2.py3-none-any.whl (11 kB) Using cached PyJWT-2.9.0-py3-none-any.whl (22 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached ruamel.yaml.clib-0.2.12-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (724 kB) Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB) Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB) Using cached certifi-2024.8.30-py3-none-any.whl (167 kB) Using cached cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (445 kB) Using cached charset_normalizer-3.4.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (144 kB) Using cached cryptography-43.0.3-cp39-abi3-manylinux_2_28_x86_64.whl (4.0 MB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.14 PyGithub-2.5.0 PyYAML-6.0.2 certifi-2024.8.30 cffi-1.17.1 charset-normalizer-3.4.0 cryptography-43.0.3 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.9.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.20 wrapt-1.16.0 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ '[' -n /bin/bash -o -n '' ']' ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2024-11-08 00:34:37,131 [ scc.config] DEBUG Found github.token 2024-11-08 00:34:37,134 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-11-08 00:34:37,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-08 00:34:37,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-08 00:34:38,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-11-08 00:34:38,064 [ scc.gh] DEBUG 4322 remaining from 5000 (Reset at 00:11 2024-11-08 00:34:38,065 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-08 00:34:38,069 [ scc.git] DEBUG Check current status 2024-11-08 00:34:38,070 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-08 00:34:38,076 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1 2024-11-08 00:34:38,076 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-08 00:34:38,130 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-11-08 00:34:38,135 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-11-08 00:34:38,141 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac) 2024-11-08 00:34:38,147 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe) 2024-11-08 00:34:38,153 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f) 2024-11-08 00:34:38,160 [ scc.config] DEBUG Found remote.origin.url 2024-11-08 00:34:38,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2024-11-08 00:34:38,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-08 00:34:39,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-08 00:34:39,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-08 00:34:40,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-08 00:34:40,246 [ scc.git] DEBUG Resetting... 2024-11-08 00:34:40,246 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-11-08 00:34:40,254 [ scc.git] DEBUG HEAD is now at e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1 2024-11-08 00:34:40,255 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-11-08 00:34:40,305 [ scc.git] DEBUG Check current status 2024-11-08 00:34:40,306 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-08 00:34:40,310 [ scc.git] DEBUG e849d72 Merge pull request #292 from ome/dependabot/submodules/omero-web-da5b7d1 2024-11-08 00:34:40,310 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-08 00:34:40,348 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-11-08 00:34:40,352 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-11-08 00:34:40,355 [ scc.git] DEBUG 749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac) 2024-11-08 00:34:40,360 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe) 2024-11-08 00:34:40,364 [ scc.git] DEBUG da5b7d11f5375f024d3881db2dcc63899b4087da omero-web (v5.27.2-1-gda5b7d11f) 2024-11-08 00:34:40,365 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-11-08 00:34:40,365 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-11-08 00:34:40,365 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-11-08 00:34:40,365 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-11-08 00:34:40,365 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-11-08 00:34:40,365 [ scc.repo] DEBUG ## PRs found: 2024-11-08 00:34:40,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None 2024-11-08 00:34:41,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/294 HTTP/1.1" 200 None 2024-11-08 00:34:41,156 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-08 00:34:41,156 [ scc.repo] DEBUG - PR 294 dependabot[bot] 'Bump omero-web from `da5b7d1` to `213bb61`' 2024-11-08 00:34:41,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None 2024-11-08 00:34:41,636 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-08 00:34:41,637 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`' 2024-11-08 00:34:41,637 [ scc.repo] DEBUG ## Branches found: 2024-11-08 00:34:41,637 [ scc.git] DEBUG Get sha1 of %s 2024-11-08 00:34:41,638 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:34:41,668 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-08 00:34:41,695 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-08 00:34:41,697 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-08 00:34:41,736 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-08 00:34:41,762 [ scc.git] DEBUG Already up to date. 2024-11-08 00:34:41,764 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head' 2024-11-08 00:34:42,147 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2024-11-08 00:34:42,147 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD 2024-11-08 00:34:42,154 [ scc.git] DEBUG Calling 'git fetch origin pull/294/head' 2024-11-08 00:34:42,452 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2024-11-08 00:34:42,453 [ scc.git] DEBUG * branch refs/pull/294/head -> FETCH_HEAD 2024-11-08 00:34:42,457 [ scc.git] DEBUG ## Unique users: [] 2024-11-08 00:34:42,457 [ scc.git] DEBUG Get sha1 of %s 2024-11-08 00:34:42,458 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:34:42,462 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9' 2024-11-08 00:34:42,468 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:34:42,472 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9' 2024-11-08 00:34:42,481 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-08 00:34:42,483 [ scc.git] DEBUG omero-py | 2 +- 2024-11-08 00:34:42,483 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-11-08 00:34:42,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-08 00:34:42,613 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...587bd8c5de8d393fbed353cefde81f5bad4ea13a' 2024-11-08 00:34:42,619 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:34:42,623 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 294 (Bump omero-web from `da5b7d1` to `213bb61`) 587bd8c5de8d393fbed353cefde81f5bad4ea13a' 2024-11-08 00:34:42,633 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-08 00:34:42,636 [ scc.git] DEBUG omero-web | 2 +- 2024-11-08 00:34:42,636 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2024-11-08 00:34:43,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-08 00:34:43,005 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-08 00:34:43,062 [ scc.git] DEBUG Submodule path 'omero-py': checked out '4fd72efaa8cdbec9da98e1d28678af16878a86ba' 2024-11-08 00:34:43,216 [ scc.git] DEBUG Submodule path 'omero-web': checked out '213bb61adc23aed4a750f2a83dc94b7efdb22cee' 2024-11-08 00:34:43,216 [ scc.git] DEBUG Get sha1 of %s 2024-11-08 00:34:43,216 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:34:43,221 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-08 00:34:43,431 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f0112327a00> has no local changes 2024-11-08 00:34:43,431 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Merged PRs: - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`' - PR 294 dependabot[bot] 'Bump omero-web from `da5b7d1` to `213bb61`' Generated by OMERO-python-superbuild-push#225 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/225/)' 2024-11-08 00:34:43,462 [ scc.git] DEBUG [detached HEAD 7aa19de] merge master -Dorg -Snone 2024-11-08 00:34:43,462 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2024-11-08 00:34:43,463 [ scc.merge] INFO Already up to date. 2024-11-08 00:34:43,463 [ scc.merge] INFO 2024-11-08 00:34:43,463 [ scc.merge] INFO Merged PRs: 2024-11-08 00:34:43,463 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`' 2024-11-08 00:34:43,463 [ scc.merge] INFO - PR 294 dependabot[bot] 'Bump omero-web from `da5b7d1` to `213bb61`' 2024-11-08 00:34:43,463 [ scc.merge] INFO 2024-11-08 00:34:43,463 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-11-08 00:34:43,463 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2024-11-08 00:34:45,598 [ scc.config] DEBUG Found github.token 2024-11-08 00:34:45,600 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2024-11-08 00:34:45,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-08 00:34:46,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-08 00:34:46,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2024-11-08 00:34:46,541 [ scc.gh] DEBUG 4310 remaining from 5000 (Reset at 00:11 2024-11-08 00:34:46,542 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-08 00:34:46,545 [ scc.git] DEBUG Check current status 2024-11-08 00:34:46,546 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-08 00:34:46,550 [ scc.git] DEBUG 7aa19de merge master -Dorg -Snone 2024-11-08 00:34:46,550 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-08 00:34:46,592 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-11-08 00:34:46,594 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-11-08 00:34:46,598 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa) 2024-11-08 00:34:46,602 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe) 2024-11-08 00:34:46,608 [ scc.git] DEBUG 213bb61adc23aed4a750f2a83dc94b7efdb22cee omero-web (v5.27.2-7-g213bb61ad) 2024-11-08 00:34:46,614 [ scc.config] DEBUG Found remote.origin.url 2024-11-08 00:34:46,615 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2024-11-08 00:34:46,616 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2024-11-08 00:34:47,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2024-11-08 00:34:47,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-08 00:34:47,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-08 00:34:48,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-08 00:34:48,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-08 00:34:48,744 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-08 00:34:48,792 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-11-08 00:34:48,792 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-08 00:34:48,796 [ scc.git] DEBUG Check current status 2024-11-08 00:34:48,796 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-08 00:34:48,800 [ scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0 2024-11-08 00:34:48,800 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-08 00:34:48,844 [ scc.config] DEBUG Found remote.origin.url 2024-11-08 00:34:49,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2024-11-08 00:34:49,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-08 00:34:50,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-08 00:34:50,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-08 00:34:50,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-08 00:34:50,879 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-08 00:34:50,914 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-08 00:34:50,915 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-11-08 00:34:50,915 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-08 00:34:50,919 [ scc.git] DEBUG Check current status 2024-11-08 00:34:50,920 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-08 00:34:50,924 [ scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312 2024-11-08 00:34:50,924 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-08 00:34:50,962 [ scc.config] DEBUG Found remote.origin.url 2024-11-08 00:34:51,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2024-11-08 00:34:51,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-08 00:34:52,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-08 00:34:52,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-08 00:34:53,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-08 00:34:53,009 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-08 00:34:53,048 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-08 00:34:53,049 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-11-08 00:34:53,049 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-08 00:34:53,053 [ scc.git] DEBUG Check current status 2024-11-08 00:34:53,054 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-08 00:34:53,057 [ scc.git] DEBUG 4fd72efa Bump version: 5.19.5 → 5.19.6.dev0 2024-11-08 00:34:53,058 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-08 00:34:53,098 [ scc.config] DEBUG Found remote.origin.url 2024-11-08 00:34:53,507 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2024-11-08 00:34:53,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-08 00:34:54,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-08 00:34:54,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-08 00:34:55,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-08 00:34:55,177 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-08 00:34:55,215 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-08 00:34:55,216 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-11-08 00:34:55,216 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-08 00:34:55,220 [ scc.git] DEBUG Check current status 2024-11-08 00:34:55,220 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-08 00:34:55,224 [ scc.git] DEBUG 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-11-08 00:34:55,224 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-08 00:34:55,267 [ scc.config] DEBUG Found remote.origin.url 2024-11-08 00:34:55,267 [ scc.git] DEBUG Repository configuration: base-branch: develop 2024-11-08 00:34:55,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2024-11-08 00:34:56,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-08 00:34:56,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-08 00:34:56,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-08 00:34:57,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-08 00:34:57,281 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-08 00:34:57,318 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-08 00:34:57,319 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-11-08 00:34:57,319 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2024-11-08 00:34:57,323 [ scc.git] DEBUG Check current status 2024-11-08 00:34:57,323 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-08 00:34:57,376 [ scc.git] DEBUG 213bb61ad Merge pull request #580 from sbesson/obj_id_mask_no_match 2024-11-08 00:34:57,377 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-08 00:34:57,417 [ scc.config] DEBUG Found remote.origin.url 2024-11-08 00:34:57,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2024-11-08 00:34:58,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2024-11-08 00:34:58,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2024-11-08 00:34:59,064 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2024-11-08 00:34:59,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2024-11-08 00:34:59,473 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-08 00:34:59,511 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-08 00:34:59,511 [ scc.git] DEBUG Resetting... 2024-11-08 00:34:59,511 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2024-11-08 00:34:59,517 [ scc.git] DEBUG HEAD is now at 7aa19de merge master -Dorg -Snone 2024-11-08 00:34:59,517 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2024-11-08 00:34:59,566 [ scc.git] DEBUG Check current status 2024-11-08 00:34:59,566 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2024-11-08 00:34:59,570 [ scc.git] DEBUG 7aa19de merge master -Dorg -Snone 2024-11-08 00:34:59,571 [ scc.git] DEBUG Calling 'git submodule status' 2024-11-08 00:34:59,608 [ scc.git] DEBUG a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4) 2024-11-08 00:34:59,611 [ scc.git] DEBUG cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f) 2024-11-08 00:34:59,614 [ scc.git] DEBUG 4fd72efaa8cdbec9da98e1d28678af16878a86ba omero-py (v5.19.5-1-g4fd72efa) 2024-11-08 00:34:59,618 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 omero-scripts (v5.8.3-1-g312afbe) 2024-11-08 00:34:59,621 [ scc.git] DEBUG 213bb61adc23aed4a750f2a83dc94b7efdb22cee omero-web (v5.27.2-7-g213bb61ad) 2024-11-08 00:34:59,622 [ scc.merge] INFO Merging Pull Request(s) based on master 2024-11-08 00:34:59,622 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2024-11-08 00:34:59,622 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2024-11-08 00:34:59,622 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2024-11-08 00:34:59,622 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2024-11-08 00:34:59,622 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2024-11-08 00:34:59,622 [ scc.repo] DEBUG ## PRs found: 2024-11-08 00:34:59,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 None 2024-11-08 00:35:00,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/294 HTTP/1.1" 200 None 2024-11-08 00:35:00,480 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-08 00:35:01,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/587bd8c5de8d393fbed353cefde81f5bad4ea13a HTTP/1.1" 200 None 2024-11-08 00:35:01,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/587bd8c5de8d393fbed353cefde81f5bad4ea13a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-08 00:35:01,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/587bd8c5de8d393fbed353cefde81f5bad4ea13a HTTP/1.1" 200 None 2024-11-08 00:35:02,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/587bd8c5de8d393fbed353cefde81f5bad4ea13a?per_page=1 HTTP/1.1" 200 2 2024-11-08 00:35:02,271 [ scc.repo] DEBUG - PR 294 dependabot[bot] 'Bump omero-web from `da5b7d1` to `213bb61`' 2024-11-08 00:35:02,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/issues/293 HTTP/1.1" 200 None 2024-11-08 00:35:02,724 [ scc.repo] DEBUG # ... Include label: dependencies 2024-11-08 00:35:03,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None 2024-11-08 00:35:03,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-08 00:35:04,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/commits/9660559833988d271074de56e54f2462a7be74e9 HTTP/1.1" 200 None 2024-11-08 00:35:04,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/statuses/9660559833988d271074de56e54f2462a7be74e9?per_page=1 HTTP/1.1" 200 2 2024-11-08 00:35:04,552 [ scc.repo] DEBUG - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`' 2024-11-08 00:35:04,552 [ scc.repo] DEBUG ## Branches found: 2024-11-08 00:35:04,552 [ scc.git] DEBUG Get sha1 of %s 2024-11-08 00:35:04,552 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:35:04,558 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-08 00:35:04,563 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-08 00:35:04,563 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-08 00:35:04,569 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-08 00:35:04,575 [ scc.git] DEBUG Already up to date. 2024-11-08 00:35:04,576 [ scc.git] DEBUG Calling 'git fetch origin pull/293/head' 2024-11-08 00:35:04,901 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2024-11-08 00:35:04,901 [ scc.git] DEBUG * branch refs/pull/293/head -> FETCH_HEAD 2024-11-08 00:35:04,909 [ scc.git] DEBUG Calling 'git fetch origin pull/294/head' 2024-11-08 00:35:05,236 [ scc.git] DEBUG From https://github.com/ome/omero-python-superbuild 2024-11-08 00:35:05,236 [ scc.git] DEBUG * branch refs/pull/294/head -> FETCH_HEAD 2024-11-08 00:35:05,243 [ scc.git] DEBUG ## Unique users: [] 2024-11-08 00:35:05,243 [ scc.git] DEBUG Get sha1 of %s 2024-11-08 00:35:05,243 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:35:05,249 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9660559833988d271074de56e54f2462a7be74e9' 2024-11-08 00:35:05,255 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:35:05,259 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 293 (Bump omero-py from `749a68a` to `4fd72ef`) 9660559833988d271074de56e54f2462a7be74e9' 2024-11-08 00:35:05,264 [ scc.git] DEBUG Already up to date. 2024-11-08 00:35:05,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-08 00:35:05,407 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...587bd8c5de8d393fbed353cefde81f5bad4ea13a' 2024-11-08 00:35:05,413 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:35:05,418 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 294 (Bump omero-web from `da5b7d1` to `213bb61`) 587bd8c5de8d393fbed353cefde81f5bad4ea13a' 2024-11-08 00:35:05,423 [ scc.git] DEBUG Already up to date. 2024-11-08 00:35:05,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-08 00:35:05,795 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-08 00:35:05,846 [ scc.git] DEBUG Get sha1 of %s 2024-11-08 00:35:05,846 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:35:05,851 [ scc.repo] DEBUG ## PRs found: 2024-11-08 00:35:06,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2024-11-08 00:35:06,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2024-11-08 00:35:07,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2024-11-08 00:35:07,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2024-11-08 00:35:08,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-08 00:35:08,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2024-11-08 00:35:09,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2024-11-08 00:35:09,152 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2024-11-08 00:35:09,153 [ scc.repo] DEBUG ## Branches found: 2024-11-08 00:35:09,153 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-11-08 00:35:09,153 [ scc.git] DEBUG Get sha1 of %s 2024-11-08 00:35:09,153 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:35:09,157 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-08 00:35:09,161 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-08 00:35:09,161 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-08 00:35:09,165 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-08 00:35:09,169 [ scc.git] DEBUG Already up to date. 2024-11-08 00:35:09,169 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2024-11-08 00:35:09,530 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2024-11-08 00:35:09,530 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2024-11-08 00:35:09,535 [ scc.git] DEBUG ## Unique users: [] 2024-11-08 00:35:09,535 [ scc.git] DEBUG Get sha1 of %s 2024-11-08 00:35:09,535 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:35:09,540 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2024-11-08 00:35:09,546 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:35:09,551 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2024-11-08 00:35:09,648 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2024-11-08 00:35:09,648 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2024-11-08 00:35:09,648 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2024-11-08 00:35:09,648 [ scc.git] DEBUG Auto-merging src/fsLists.py 2024-11-08 00:35:09,648 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2024-11-08 00:35:09,648 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2024-11-08 00:35:09,648 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2024-11-08 00:35:09,648 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2024-11-08 00:35:09,648 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2024-11-08 00:35:09,649 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-08 00:35:09,652 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2024-11-08 00:35:09,653 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2024-11-08 00:35:09,653 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2024-11-08 00:35:09,653 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2024-11-08 00:35:09,653 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2024-11-08 00:35:09,653 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2024-11-08 00:35:09,653 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2024-11-08 00:35:09,653 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2024-11-08 00:35:09,653 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2024-11-08 00:35:09,653 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2024-11-08 00:35:09,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-08 00:35:09,790 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-08 00:35:09,831 [ scc.git] DEBUG Get sha1 of %s 2024-11-08 00:35:09,831 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:35:09,836 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-08 00:35:09,873 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-08 00:35:09,879 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fb608fdef40> has no local changes 2024-11-08 00:35:09,880 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Generated by OMERO-python-superbuild-push#225 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/225/)' 2024-11-08 00:35:09,888 [ scc.git] DEBUG [detached HEAD 42a0a71] merge master -Dorg -Ssuccess-only 2024-11-08 00:35:09,889 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-08 00:35:09,889 [ scc.repo] DEBUG ## PRs found: 2024-11-08 00:35:10,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2024-11-08 00:35:10,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2024-11-08 00:35:11,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2024-11-08 00:35:11,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2024-11-08 00:35:12,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-08 00:35:12,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2024-11-08 00:35:13,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2024-11-08 00:35:13,080 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2024-11-08 00:35:13,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2024-11-08 00:35:14,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2024-11-08 00:35:14,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2024-11-08 00:35:15,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2024-11-08 00:35:15,090 [ scc.repo] DEBUG ## Branches found: 2024-11-08 00:35:15,090 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-11-08 00:35:15,091 [ scc.git] DEBUG Get sha1 of %s 2024-11-08 00:35:15,091 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:35:15,097 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-08 00:35:15,103 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-08 00:35:15,103 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-08 00:35:15,109 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-08 00:35:15,115 [ scc.git] DEBUG Already up to date. 2024-11-08 00:35:15,116 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2024-11-08 00:35:15,492 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2024-11-08 00:35:15,493 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2024-11-08 00:35:15,530 [ scc.git] DEBUG ## Unique users: [] 2024-11-08 00:35:15,532 [ scc.git] DEBUG Get sha1 of %s 2024-11-08 00:35:15,533 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:35:15,556 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2024-11-08 00:35:15,562 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:35:15,566 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2024-11-08 00:35:15,575 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2024-11-08 00:35:15,576 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-08 00:35:15,578 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2024-11-08 00:35:15,578 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2024-11-08 00:35:15,578 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2024-11-08 00:35:15,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-08 00:35:15,724 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-08 00:35:15,761 [ scc.git] DEBUG Get sha1 of %s 2024-11-08 00:35:15,761 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:35:15,766 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-08 00:35:15,812 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-08 00:35:15,820 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fb60927a430> has no local changes 2024-11-08 00:35:15,820 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Generated by OMERO-python-superbuild-push#225 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/225/)' 2024-11-08 00:35:15,830 [ scc.git] DEBUG [detached HEAD f671a50] merge master -Dorg -Ssuccess-only 2024-11-08 00:35:15,831 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-08 00:35:15,831 [ scc.repo] DEBUG ## PRs found: 2024-11-08 00:35:16,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2024-11-08 00:35:16,912 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/431 HTTP/1.1" 200 None 2024-11-08 00:35:17,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None 2024-11-08 00:35:17,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-08 00:35:18,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-08 00:35:18,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None 2024-11-08 00:35:19,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0e500ec05bf9227b66b28a480b40e0936241d953?per_page=1 HTTP/1.1" 200 None 2024-11-08 00:35:19,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953 HTTP/1.1" 200 None 2024-11-08 00:35:20,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0e500ec05bf9227b66b28a480b40e0936241d953/status HTTP/1.1" 200 None 2024-11-08 00:35:20,283 [ scc.repo] DEBUG - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers' 2024-11-08 00:35:20,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/429 HTTP/1.1" 200 None 2024-11-08 00:35:21,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427 HTTP/1.1" 200 None 2024-11-08 00:35:21,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/427/comments HTTP/1.1" 200 None 2024-11-08 00:35:21,706 [ scc.repo] DEBUG # ... Include label: include 2024-11-08 00:35:22,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None 2024-11-08 00:35:22,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-08 00:35:23,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-08 00:35:23,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None 2024-11-08 00:35:23,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1?per_page=1 HTTP/1.1" 200 None 2024-11-08 00:35:24,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1 HTTP/1.1" 200 None 2024-11-08 00:35:24,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1/status HTTP/1.1" 200 None 2024-11-08 00:35:24,884 [ scc.repo] DEBUG - PR 427 Rdornier 'Add fileset folder creation' 2024-11-08 00:35:25,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None 2024-11-08 00:35:25,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None 2024-11-08 00:35:26,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2024-11-08 00:35:26,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-08 00:35:27,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-08 00:35:27,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2024-11-08 00:35:28,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None 2024-11-08 00:35:28,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2024-11-08 00:35:28,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None 2024-11-08 00:35:28,988 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method' 2024-11-08 00:35:29,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2024-11-08 00:35:29,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2024-11-08 00:35:30,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2024-11-08 00:35:30,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-08 00:35:31,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-08 00:35:31,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2024-11-08 00:35:32,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-11-08 00:35:32,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-08 00:35:33,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-08 00:35:33,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-11-08 00:35:34,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None 2024-11-08 00:35:34,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2024-11-08 00:35:35,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None 2024-11-08 00:35:35,095 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2024-11-08 00:35:35,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None 2024-11-08 00:35:35,559 [ scc.repo] DEBUG # ... Exclude label: exclude 2024-11-08 00:35:35,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None 2024-11-08 00:35:36,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None 2024-11-08 00:35:36,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None 2024-11-08 00:35:37,349 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-08 00:35:37,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None 2024-11-08 00:35:38,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2 2024-11-08 00:35:38,244 [ scc.repo] DEBUG - PR 337 will-moore 'bulk.yml depth is passed to xargs' 2024-11-08 00:35:38,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2024-11-08 00:35:39,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2024-11-08 00:35:39,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-11-08 00:35:40,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-08 00:35:40,593 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-08 00:35:41,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-11-08 00:35:41,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None 2024-11-08 00:35:42,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2024-11-08 00:35:42,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None 2024-11-08 00:35:42,422 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2024-11-08 00:35:42,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None 2024-11-08 00:35:43,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None 2024-11-08 00:35:43,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2024-11-08 00:35:44,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2024-11-08 00:35:44,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None 2024-11-08 00:35:45,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-08 00:35:45,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None 2024-11-08 00:35:46,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2 2024-11-08 00:35:46,189 [ scc.repo] DEBUG - PR 299 joshmoore 'Add parents and children to omero obj' 2024-11-08 00:35:46,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None 2024-11-08 00:35:47,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None 2024-11-08 00:35:47,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-08 00:35:48,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None 2024-11-08 00:35:48,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2 2024-11-08 00:35:48,450 [ scc.repo] DEBUG - PR 266 joshmoore 'errors: use raise_error from cli plugins' 2024-11-08 00:35:48,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None 2024-11-08 00:35:49,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None 2024-11-08 00:35:49,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None 2024-11-08 00:35:50,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-08 00:35:50,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None 2024-11-08 00:35:51,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2 2024-11-08 00:35:51,278 [ scc.repo] DEBUG - PR 207 manics 'BlitzGateway.connect raise on error' 2024-11-08 00:35:51,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2024-11-08 00:35:52,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2024-11-08 00:35:52,742 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2024-11-08 00:35:53,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-08 00:35:53,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2024-11-08 00:35:54,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2024-11-08 00:35:54,109 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2024-11-08 00:35:54,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None 2024-11-08 00:35:54,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None 2024-11-08 00:35:55,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None 2024-11-08 00:35:55,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None 2024-11-08 00:35:55,889 [ scc.repo] DEBUG ## Branches found: 2024-11-08 00:35:55,889 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-11-08 00:35:55,889 [ scc.git] DEBUG Get sha1 of %s 2024-11-08 00:35:55,889 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:35:55,894 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-08 00:35:55,898 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-08 00:35:55,898 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-08 00:35:55,904 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-08 00:35:55,909 [ scc.git] DEBUG Already up to date. 2024-11-08 00:35:55,909 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2024-11-08 00:35:57,398 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-11-08 00:35:57,399 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2024-11-08 00:35:57,403 [ scc.git] DEBUG Calling 'git fetch origin pull/207/head' 2024-11-08 00:35:57,714 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-11-08 00:35:57,714 [ scc.git] DEBUG * branch refs/pull/207/head -> FETCH_HEAD 2024-11-08 00:35:57,719 [ scc.git] DEBUG Calling 'git fetch origin pull/266/head' 2024-11-08 00:35:58,081 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-11-08 00:35:58,082 [ scc.git] DEBUG * branch refs/pull/266/head -> FETCH_HEAD 2024-11-08 00:35:58,086 [ scc.git] DEBUG Calling 'git fetch origin pull/299/head' 2024-11-08 00:35:58,395 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-11-08 00:35:58,395 [ scc.git] DEBUG * branch refs/pull/299/head -> FETCH_HEAD 2024-11-08 00:35:58,403 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2024-11-08 00:35:58,845 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-11-08 00:35:58,846 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2024-11-08 00:35:58,850 [ scc.git] DEBUG Calling 'git fetch origin pull/337/head' 2024-11-08 00:35:59,146 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-11-08 00:35:59,146 [ scc.git] DEBUG * branch refs/pull/337/head -> FETCH_HEAD 2024-11-08 00:35:59,151 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2024-11-08 00:35:59,437 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-11-08 00:35:59,438 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2024-11-08 00:35:59,442 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2024-11-08 00:35:59,736 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-11-08 00:35:59,736 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2024-11-08 00:35:59,741 [ scc.git] DEBUG Calling 'git fetch origin pull/427/head' 2024-11-08 00:36:00,021 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-11-08 00:36:00,021 [ scc.git] DEBUG * branch refs/pull/427/head -> FETCH_HEAD 2024-11-08 00:36:00,026 [ scc.git] DEBUG Calling 'git fetch origin pull/431/head' 2024-11-08 00:36:00,328 [ scc.git] DEBUG From https://github.com/ome/omero-py 2024-11-08 00:36:00,328 [ scc.git] DEBUG * branch refs/pull/431/head -> FETCH_HEAD 2024-11-08 00:36:00,332 [ scc.git] DEBUG ## Unique users: [] 2024-11-08 00:36:00,332 [ scc.git] DEBUG Get sha1 of %s 2024-11-08 00:36:00,333 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:36:00,337 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2024-11-08 00:36:00,349 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:36:00,353 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2024-11-08 00:36:00,374 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2024-11-08 00:36:00,374 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2024-11-08 00:36:00,375 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-08 00:36:00,378 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2024-11-08 00:36:00,378 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2024-11-08 00:36:00,378 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2024-11-08 00:36:00,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-08 00:36:00,520 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb' 2024-11-08 00:36:00,532 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:36:00,536 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb' 2024-11-08 00:36:00,571 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2024-11-08 00:36:00,572 [ scc.git] DEBUG Auto-merging test/unit/test_gateway.py 2024-11-08 00:36:00,572 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-08 00:36:00,579 [ scc.git] DEBUG src/omero/gateway/__init__.py | 19 +++++++++++++------ 2024-11-08 00:36:00,579 [ scc.git] DEBUG test/unit/test_gateway.py | 16 ++++++++++++++++ 2024-11-08 00:36:00,579 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 6 deletions(-) 2024-11-08 00:36:00,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-08 00:36:00,909 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f' 2024-11-08 00:36:00,921 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:36:00,925 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f' 2024-11-08 00:36:00,961 [ scc.git] DEBUG Auto-merging src/omero/plugins/search.py 2024-11-08 00:36:00,962 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-08 00:36:00,965 [ scc.git] DEBUG src/omero/plugins/search.py | 13 +++++++++---- 2024-11-08 00:36:00,965 [ scc.git] DEBUG 1 file changed, 9 insertions(+), 4 deletions(-) 2024-11-08 00:36:01,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-08 00:36:01,283 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a' 2024-11-08 00:36:01,295 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:36:01,299 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a' 2024-11-08 00:36:01,357 [ scc.git] DEBUG Auto-merging src/omero/plugins/obj.py 2024-11-08 00:36:01,357 [ scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py 2024-11-08 00:36:01,358 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-08 00:36:01,362 [ scc.git] DEBUG src/omero/plugins/obj.py | 69 ++++++++++++++++++++++++++++++++++++++++++- 2024-11-08 00:36:01,362 [ scc.git] DEBUG test/unit/clitest/test_obj.py | 2 +- 2024-11-08 00:36:01,362 [ scc.git] DEBUG 2 files changed, 69 insertions(+), 2 deletions(-) 2024-11-08 00:36:01,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-08 00:36:01,668 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2024-11-08 00:36:01,683 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:36:01,690 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2024-11-08 00:36:01,708 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-08 00:36:01,710 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2024-11-08 00:36:01,710 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2024-11-08 00:36:01,710 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2024-11-08 00:36:01,711 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2024-11-08 00:36:01,711 [ scc.git] DEBUG create mode 100644 connect.py 2024-11-08 00:36:02,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-08 00:36:02,053 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5' 2024-11-08 00:36:02,065 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:36:02,070 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5' 2024-11-08 00:36:02,180 [ scc.git] DEBUG Auto-merging src/omero/plugins/import.py 2024-11-08 00:36:02,182 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-08 00:36:02,185 [ scc.git] DEBUG src/omero/plugins/import.py | 2 ++ 2024-11-08 00:36:02,185 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2024-11-08 00:36:02,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-08 00:36:02,428 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2024-11-08 00:36:02,440 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:36:02,445 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2024-11-08 00:36:02,711 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2024-11-08 00:36:02,711 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-08 00:36:02,715 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2024-11-08 00:36:02,715 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2024-11-08 00:36:02,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-08 00:36:02,876 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2024-11-08 00:36:02,888 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:36:02,892 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2024-11-08 00:36:03,213 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2024-11-08 00:36:03,214 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-08 00:36:03,221 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------ 2024-11-08 00:36:03,221 [ scc.git] DEBUG 1 file changed, 36 deletions(-) 2024-11-08 00:36:03,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-08 00:36:03,366 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1' 2024-11-08 00:36:03,378 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:36:03,382 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 427 (Add fileset folder creation) ed3c6840a5a48ed1a8fa7cd2fd286a185f6017c1' 2024-11-08 00:36:03,438 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-08 00:36:03,441 [ scc.git] DEBUG .gitignore | 1 + 2024-11-08 00:36:03,441 [ scc.git] DEBUG src/omero/plugins/download.py | 17 ++++++++++++----- 2024-11-08 00:36:03,441 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 5 deletions(-) 2024-11-08 00:36:03,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-08 00:36:03,756 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0e500ec05bf9227b66b28a480b40e0936241d953' 2024-11-08 00:36:03,769 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:36:03,775 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 431 (omero.HdfStorage.update: add size check on data.rowNumbers) 0e500ec05bf9227b66b28a480b40e0936241d953' 2024-11-08 00:36:03,796 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-08 00:36:03,799 [ scc.git] DEBUG src/omero/hdfstorageV2.py | 1 + 2024-11-08 00:36:03,799 [ scc.git] DEBUG 1 file changed, 1 insertion(+) 2024-11-08 00:36:04,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-08 00:36:04,142 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-08 00:36:04,182 [ scc.git] DEBUG Get sha1 of %s 2024-11-08 00:36:04,183 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:36:04,188 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-08 00:36:04,231 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-08 00:36:04,244 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fb608794eb0> has no local changes 2024-11-08 00:36:04,244 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 387 will-moore 'Numpy pixels type' (label: exclude) - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 207 manics 'BlitzGateway.connect raise on error' - PR 266 joshmoore 'errors: use raise_error from cli plugins' - PR 299 joshmoore 'Add parents and children to omero obj' - PR 332 jburel 'Build conda' - PR 337 will-moore 'bulk.yml depth is passed to xargs' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 427 Rdornier 'Add fileset folder creation' - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers' Generated by OMERO-python-superbuild-push#225 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/225/)' 2024-11-08 00:36:04,255 [ scc.git] DEBUG [detached HEAD 1a6038ff] merge master -Dorg -Ssuccess-only 2024-11-08 00:36:04,255 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-08 00:36:04,255 [ scc.git] INFO Overriding base-branch from master to develop 2024-11-08 00:36:04,256 [ scc.repo] DEBUG ## PRs found: 2024-11-08 00:36:04,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2024-11-08 00:36:05,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2024-11-08 00:36:05,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2024-11-08 00:36:06,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-11-08 00:36:06,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-08 00:36:07,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-08 00:36:07,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2024-11-08 00:36:08,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2024-11-08 00:36:08,025 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-11-08 00:36:08,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None 2024-11-08 00:36:09,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None 2024-11-08 00:36:09,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545/issues/216/comments?page=2 HTTP/1.1" 200 None 2024-11-08 00:36:10,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None 2024-11-08 00:36:10,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None 2024-11-08 00:36:10,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2024-11-08 00:36:11,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2024-11-08 00:36:11,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-11-08 00:36:12,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-08 00:36:12,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2024-11-08 00:36:13,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2024-11-08 00:36:13,189 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-11-08 00:36:13,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2024-11-08 00:36:14,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2024-11-08 00:36:14,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2024-11-08 00:36:15,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2024-11-08 00:36:15,052 [ scc.repo] DEBUG ## Branches found: 2024-11-08 00:36:15,052 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-11-08 00:36:15,052 [ scc.git] DEBUG Get sha1 of %s 2024-11-08 00:36:15,052 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:36:15,057 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2024-11-08 00:36:15,061 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-08 00:36:15,061 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2024-11-08 00:36:15,065 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2024-11-08 00:36:15,070 [ scc.git] DEBUG Already up to date. 2024-11-08 00:36:15,070 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2024-11-08 00:36:15,967 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2024-11-08 00:36:15,967 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2024-11-08 00:36:15,972 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2024-11-08 00:36:16,430 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2024-11-08 00:36:16,431 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2024-11-08 00:36:16,435 [ scc.git] DEBUG ## Unique users: [] 2024-11-08 00:36:16,436 [ scc.git] DEBUG Get sha1 of %s 2024-11-08 00:36:16,436 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:36:16,440 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-11-08 00:36:16,446 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:36:16,450 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-11-08 00:36:16,655 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py 2024-11-08 00:36:16,655 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py 2024-11-08 00:36:16,655 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2024-11-08 00:36:16,655 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2024-11-08 00:36:16,661 [ scc.git] DEBUG Calling 'git reset --hard 312afbed633613e1f728a1fe9eaac096e54318e0' 2024-11-08 00:36:16,666 [ scc.git] DEBUG HEAD is now at 312afbe Bump version: 5.8.3 → 5.8.4.dev0 2024-11-08 00:36:16,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-08 00:36:16,795 [ scc.git] DEBUG Calling 'git merge-base 312afbed633613e1f728a1fe9eaac096e54318e0 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2024-11-08 00:36:16,802 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..312afbed633613e1f728a1fe9eaac096e54318e0' 2024-11-08 00:36:16,808 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#225](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/225/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/225/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2024-11-08 00:36:16,818 [ scc.config] DEBUG Found github.token 2024-11-08 00:36:16,818 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2024-11-08 00:36:16,819 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-11-08 00:36:16,823 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:36:16,827 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2024-11-08 00:36:16,870 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-08 00:36:16,873 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2024-11-08 00:36:16,873 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2024-11-08 00:36:17,184 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-08 00:36:17,185 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-08 00:36:17,221 [ scc.git] DEBUG Get sha1 of %s 2024-11-08 00:36:17,222 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:36:17,232 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-08 00:36:17,273 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-08 00:36:17,297 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fb608746640> has no local changes 2024-11-08 00:36:17,300 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#225 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/225/)' 2024-11-08 00:36:17,361 [ scc.git] DEBUG [detached HEAD f9c3ae3] merge master -Dorg -Ssuccess-only 2024-11-08 00:36:17,365 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-08 00:36:17,368 [ scc.repo] DEBUG ## PRs found: 2024-11-08 00:36:17,815 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2024-11-08 00:36:18,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/594 HTTP/1.1" 200 None 2024-11-08 00:36:18,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6bba7f773bb6c4217607439f9adab8814bcd0ac6 HTTP/1.1" 200 None 2024-11-08 00:36:19,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6bba7f773bb6c4217607439f9adab8814bcd0ac6/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-08 00:36:19,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6bba7f773bb6c4217607439f9adab8814bcd0ac6/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-08 00:36:20,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6bba7f773bb6c4217607439f9adab8814bcd0ac6 HTTP/1.1" 200 None 2024-11-08 00:36:20,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/6bba7f773bb6c4217607439f9adab8814bcd0ac6?per_page=1 HTTP/1.1" 200 None 2024-11-08 00:36:21,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6bba7f773bb6c4217607439f9adab8814bcd0ac6 HTTP/1.1" 200 None 2024-11-08 00:36:21,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6bba7f773bb6c4217607439f9adab8814bcd0ac6/status HTTP/1.1" 200 None 2024-11-08 00:36:21,527 [ scc.repo] DEBUG - PR 594 knabar 'Add minimum batch size to avoid infinite loop due to zero batch size' 2024-11-08 00:36:21,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/592 HTTP/1.1" 200 None 2024-11-08 00:36:22,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/721002a9ad481311a44d093e26641344492e149c HTTP/1.1" 200 None 2024-11-08 00:36:22,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/721002a9ad481311a44d093e26641344492e149c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-08 00:36:23,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/721002a9ad481311a44d093e26641344492e149c/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-08 00:36:23,828 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/721002a9ad481311a44d093e26641344492e149c HTTP/1.1" 200 None 2024-11-08 00:36:24,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/721002a9ad481311a44d093e26641344492e149c?per_page=1 HTTP/1.1" 200 None 2024-11-08 00:36:24,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/721002a9ad481311a44d093e26641344492e149c HTTP/1.1" 200 None 2024-11-08 00:36:25,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/721002a9ad481311a44d093e26641344492e149c/status HTTP/1.1" 200 None 2024-11-08 00:36:25,141 [ scc.repo] DEBUG - PR 592 jburel 'Replace pkg_resources' 2024-11-08 00:36:25,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/591 HTTP/1.1" 200 None 2024-11-08 00:36:26,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8a54f0347e7174a744c4c210d0734effd029acbe HTTP/1.1" 200 None 2024-11-08 00:36:26,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8a54f0347e7174a744c4c210d0734effd029acbe/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-08 00:36:27,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8a54f0347e7174a744c4c210d0734effd029acbe/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-08 00:36:27,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8a54f0347e7174a744c4c210d0734effd029acbe HTTP/1.1" 200 None 2024-11-08 00:36:27,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/8a54f0347e7174a744c4c210d0734effd029acbe?per_page=1 HTTP/1.1" 200 None 2024-11-08 00:36:28,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8a54f0347e7174a744c4c210d0734effd029acbe HTTP/1.1" 200 None 2024-11-08 00:36:28,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/8a54f0347e7174a744c4c210d0734effd029acbe/status HTTP/1.1" 200 None 2024-11-08 00:36:28,846 [ scc.repo] DEBUG - PR 591 jburel 'Action update' 2024-11-08 00:36:29,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/590 HTTP/1.1" 200 None 2024-11-08 00:36:29,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b62eb79447919619888bd28ee4e264f7b744f314 HTTP/1.1" 200 None 2024-11-08 00:36:30,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b62eb79447919619888bd28ee4e264f7b744f314/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-08 00:36:30,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b62eb79447919619888bd28ee4e264f7b744f314/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-08 00:36:31,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b62eb79447919619888bd28ee4e264f7b744f314 HTTP/1.1" 200 None 2024-11-08 00:36:31,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/b62eb79447919619888bd28ee4e264f7b744f314?per_page=1 HTTP/1.1" 200 None 2024-11-08 00:36:32,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b62eb79447919619888bd28ee4e264f7b744f314 HTTP/1.1" 200 None 2024-11-08 00:36:32,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b62eb79447919619888bd28ee4e264f7b744f314/status HTTP/1.1" 200 None 2024-11-08 00:36:32,491 [ scc.repo] DEBUG - PR 590 knabar 'Update changelog' 2024-11-08 00:36:32,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/585 HTTP/1.1" 200 None 2024-11-08 00:36:33,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/583 HTTP/1.1" 200 None 2024-11-08 00:36:33,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/583/comments HTTP/1.1" 200 None 2024-11-08 00:36:34,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/dd2879608e047a7d71a648a23e6955ce591950fd HTTP/1.1" 200 None 2024-11-08 00:36:35,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/dd2879608e047a7d71a648a23e6955ce591950fd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-08 00:36:35,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/dd2879608e047a7d71a648a23e6955ce591950fd/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-08 00:36:35,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/dd2879608e047a7d71a648a23e6955ce591950fd HTTP/1.1" 200 None 2024-11-08 00:36:36,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/dd2879608e047a7d71a648a23e6955ce591950fd?per_page=1 HTTP/1.1" 200 None 2024-11-08 00:36:36,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/dd2879608e047a7d71a648a23e6955ce591950fd HTTP/1.1" 200 None 2024-11-08 00:36:37,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/dd2879608e047a7d71a648a23e6955ce591950fd/status HTTP/1.1" 200 None 2024-11-08 00:36:37,174 [ scc.repo] DEBUG - PR 583 DavidStirling 'Allow users to click a group name to quick-switch to that group' 2024-11-08 00:36:37,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581 HTTP/1.1" 200 None 2024-11-08 00:36:38,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/581/comments HTTP/1.1" 200 None 2024-11-08 00:36:38,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2024-11-08 00:36:39,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None 2024-11-08 00:36:39,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2024-11-08 00:36:39,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2024-11-08 00:36:40,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-11-08 00:36:40,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-08 00:36:41,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-08 00:36:41,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-11-08 00:36:42,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None 2024-11-08 00:36:42,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2024-11-08 00:36:43,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None 2024-11-08 00:36:43,110 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2024-11-08 00:36:43,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2024-11-08 00:36:44,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2024-11-08 00:36:44,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-11-08 00:36:45,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-08 00:36:45,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-08 00:36:45,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-11-08 00:36:46,369 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None 2024-11-08 00:36:46,799 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2024-11-08 00:36:47,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None 2024-11-08 00:36:47,214 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2024-11-08 00:36:47,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2024-11-08 00:36:48,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2024-11-08 00:36:48,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2024-11-08 00:36:49,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2024-11-08 00:36:49,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None 2024-11-08 00:36:49,591 [ scc.repo] DEBUG ## Branches found: 2024-11-08 00:36:49,591 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-11-08 00:36:49,592 [ scc.git] DEBUG Get sha1 of %s 2024-11-08 00:36:49,592 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:36:49,597 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2024-11-08 00:36:49,601 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2024-11-08 00:36:49,601 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2024-11-08 00:36:49,606 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2024-11-08 00:36:49,611 [ scc.git] DEBUG Already up to date. 2024-11-08 00:36:49,611 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2024-11-08 00:36:51,323 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-11-08 00:36:51,323 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2024-11-08 00:36:51,328 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2024-11-08 00:36:51,635 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-11-08 00:36:51,635 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2024-11-08 00:36:51,640 [ scc.git] DEBUG Calling 'git fetch origin pull/583/head' 2024-11-08 00:36:52,089 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-11-08 00:36:52,089 [ scc.git] DEBUG * branch refs/pull/583/head -> FETCH_HEAD 2024-11-08 00:36:52,094 [ scc.git] DEBUG Calling 'git fetch origin pull/590/head' 2024-11-08 00:36:52,381 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-11-08 00:36:52,381 [ scc.git] DEBUG * branch refs/pull/590/head -> FETCH_HEAD 2024-11-08 00:36:52,386 [ scc.git] DEBUG Calling 'git fetch origin pull/591/head' 2024-11-08 00:36:53,264 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-11-08 00:36:53,264 [ scc.git] DEBUG * branch refs/pull/591/head -> FETCH_HEAD 2024-11-08 00:36:53,270 [ scc.git] DEBUG Calling 'git fetch origin pull/592/head' 2024-11-08 00:36:53,577 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-11-08 00:36:53,577 [ scc.git] DEBUG * branch refs/pull/592/head -> FETCH_HEAD 2024-11-08 00:36:53,582 [ scc.git] DEBUG Calling 'git fetch origin pull/594/head' 2024-11-08 00:36:53,884 [ scc.git] DEBUG From https://github.com/ome/omero-web 2024-11-08 00:36:53,884 [ scc.git] DEBUG * branch refs/pull/594/head -> FETCH_HEAD 2024-11-08 00:36:53,890 [ scc.git] DEBUG ## Unique users: [] 2024-11-08 00:36:53,890 [ scc.git] DEBUG Get sha1 of %s 2024-11-08 00:36:53,890 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:36:53,895 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2024-11-08 00:36:53,904 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:36:53,909 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2024-11-08 00:36:53,930 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2024-11-08 00:36:53,930 [ scc.git] DEBUG Auto-merging setup.py 2024-11-08 00:36:53,931 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-08 00:36:53,934 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2024-11-08 00:36:53,935 [ scc.git] DEBUG setup.py | 1 + 2024-11-08 00:36:53,935 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2024-11-08 00:36:54,083 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-08 00:36:54,084 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2024-11-08 00:36:54,093 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:36:54,098 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2024-11-08 00:36:54,118 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2024-11-08 00:36:54,119 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2024-11-08 00:36:54,119 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-08 00:36:54,124 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2024-11-08 00:36:54,124 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2024-11-08 00:36:54,124 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2024-11-08 00:36:54,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-08 00:36:54,473 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dd2879608e047a7d71a648a23e6955ce591950fd' 2024-11-08 00:36:54,482 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:36:54,487 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 583 (Allow users to click a group name to quick-switch to that group) dd2879608e047a7d71a648a23e6955ce591950fd' 2024-11-08 00:36:54,700 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-08 00:36:54,703 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_content.html | 8 ++++++-- 2024-11-08 00:36:54,704 [ scc.git] DEBUG .../templates/webclient/base/includes/group_user_dropdown2.html | 2 -- 2024-11-08 00:36:54,704 [ scc.git] DEBUG 2 files changed, 6 insertions(+), 4 deletions(-) 2024-11-08 00:36:54,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-08 00:36:54,860 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b62eb79447919619888bd28ee4e264f7b744f314' 2024-11-08 00:36:54,870 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:36:54,875 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 590 (Update changelog) b62eb79447919619888bd28ee4e264f7b744f314' 2024-11-08 00:36:54,894 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-08 00:36:54,897 [ scc.git] DEBUG CHANGELOG.md | 15 +++++++++++++++ 2024-11-08 00:36:54,897 [ scc.git] DEBUG 1 file changed, 15 insertions(+) 2024-11-08 00:36:55,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-08 00:36:55,251 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8a54f0347e7174a744c4c210d0734effd029acbe' 2024-11-08 00:36:55,260 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:36:55,264 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 591 (Action update) 8a54f0347e7174a744c4c210d0734effd029acbe' 2024-11-08 00:36:55,282 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-08 00:36:55,286 [ scc.git] DEBUG .github/workflows/codeql-analysis.yml | 2 +- 2024-11-08 00:36:55,286 [ scc.git] DEBUG .github/workflows/install.yml | 4 ++-- 2024-11-08 00:36:55,286 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 6 +++--- 2024-11-08 00:36:55,286 [ scc.git] DEBUG .github/workflows/tox.yml | 4 ++-- 2024-11-08 00:36:55,286 [ scc.git] DEBUG .gitignore | 1 + 2024-11-08 00:36:55,286 [ scc.git] DEBUG 5 files changed, 9 insertions(+), 8 deletions(-) 2024-11-08 00:36:55,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-08 00:36:55,750 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...721002a9ad481311a44d093e26641344492e149c' 2024-11-08 00:36:55,758 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:36:55,762 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 592 (Replace pkg_resources) 721002a9ad481311a44d093e26641344492e149c' 2024-11-08 00:36:55,780 [ scc.git] DEBUG Auto-merging setup.py 2024-11-08 00:36:55,781 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-08 00:36:55,785 [ scc.git] DEBUG omero/plugins/web.py | 6 +++--- 2024-11-08 00:36:55,785 [ scc.git] DEBUG setup.py | 3 ++- 2024-11-08 00:36:55,785 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 4 deletions(-) 2024-11-08 00:36:56,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-08 00:36:56,126 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6bba7f773bb6c4217607439f9adab8814bcd0ac6' 2024-11-08 00:36:56,135 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:36:56,139 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 594 (Add minimum batch size to avoid infinite loop due to zero batch size) 6bba7f773bb6c4217607439f9adab8814bcd0ac6' 2024-11-08 00:36:56,158 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2024-11-08 00:36:56,161 [ scc.git] DEBUG omeroweb/webclient/templates/webclient/annotations/omero_table.html | 5 +++-- 2024-11-08 00:36:56,161 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 2 deletions(-) 2024-11-08 00:36:56,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-08 00:36:56,528 [ scc.git] DEBUG Calling 'git submodule update' 2024-11-08 00:36:56,569 [ scc.git] DEBUG Get sha1 of %s 2024-11-08 00:36:56,570 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2024-11-08 00:36:56,574 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-08 00:36:56,612 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-08 00:36:56,622 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fb608755b80> has no local changes 2024-11-08 00:36:56,623 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 583 DavidStirling 'Allow users to click a group name to quick-switch to that group' - PR 590 knabar 'Update changelog' - PR 591 jburel 'Action update' - PR 592 jburel 'Replace pkg_resources' - PR 594 knabar 'Add minimum batch size to avoid infinite loop due to zero batch size' Generated by OMERO-python-superbuild-push#225 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/225/)' 2024-11-08 00:36:56,634 [ scc.git] DEBUG [detached HEAD 6dc61dbb6] merge master -Dorg -Ssuccess-only 2024-11-08 00:36:56,634 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-08 00:36:56,634 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2024-11-08 00:36:56,684 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2024-11-08 00:36:56,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-08 00:36:56,940 [ scc.config] DEBUG Found submodule.omero-marshal.url 2024-11-08 00:36:57,316 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-08 00:36:57,328 [ scc.config] DEBUG Found submodule.omero-py.url 2024-11-08 00:36:57,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-08 00:36:57,707 [ scc.config] DEBUG Found submodule.omero-scripts.url 2024-11-08 00:36:58,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-08 00:36:58,090 [ scc.config] DEBUG Found submodule.omero-web.url 2024-11-08 00:36:58,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2024-11-08 00:36:58,487 [ scc.git] DEBUG Calling 'git status --porcelain' 2024-11-08 00:36:58,514 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fb609267a00> has local changes 2024-11-08 00:36:58,515 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Merged PRs: - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`' - PR 294 dependabot[bot] 'Bump omero-web from `da5b7d1` to `213bb61`' Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Repository: ome/omero-marshal Excluded PRs: - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Repository: ome/omero-py Excluded PRs: - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 387 will-moore 'Numpy pixels type' (label: exclude) - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 207 manics 'BlitzGateway.connect raise on error' - PR 266 joshmoore 'errors: use raise_error from cli plugins' - PR 299 joshmoore 'Add parents and children to omero obj' - PR 332 jburel 'Build conda' - PR 337 will-moore 'bulk.yml depth is passed to xargs' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 427 Rdornier 'Add fileset folder creation' - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers' Repository: ome/omero-scripts Excluded PRs: - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 583 DavidStirling 'Allow users to click a group name to quick-switch to that group' - PR 590 knabar 'Update changelog' - PR 591 jburel 'Action update' - PR 592 jburel 'Replace pkg_resources' - PR 594 knabar 'Add minimum batch size to avoid infinite loop due to zero batch size' Generated by OMERO-python-superbuild-push#225 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/225/)' 2024-11-08 00:36:58,524 [ scc.git] DEBUG [detached HEAD 40f790a] merge master -Dorg -Ssuccess-only 2024-11-08 00:36:58,524 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2024-11-08 00:36:58,525 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2024-11-08 00:36:58,525 [ scc.merge] INFO Already up to date. 2024-11-08 00:36:58,525 [ scc.merge] INFO 2024-11-08 00:36:58,525 [ scc.merge] INFO Merged PRs: 2024-11-08 00:36:58,525 [ scc.merge] INFO - PR 293 dependabot[bot] 'Bump omero-py from `749a68a` to `4fd72ef`' 2024-11-08 00:36:58,525 [ scc.merge] INFO - PR 294 dependabot[bot] 'Bump omero-web from `da5b7d1` to `213bb61`' 2024-11-08 00:36:58,525 [ scc.merge] INFO 2024-11-08 00:36:58,525 [ scc.merge] INFO Repository: ome/omero-dropbox 2024-11-08 00:36:58,525 [ scc.merge] INFO Already up to date. 2024-11-08 00:36:58,525 [ scc.merge] INFO 2024-11-08 00:36:58,525 [ scc.merge] INFO Merged PRs: 2024-11-08 00:36:58,525 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2024-11-08 00:36:58,525 [ scc.merge] INFO 2024-11-08 00:36:58,525 [ scc.merge] INFO Repository: ome/omero-marshal 2024-11-08 00:36:58,525 [ scc.merge] INFO Excluded PRs: 2024-11-08 00:36:58,525 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2024-11-08 00:36:58,525 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2024-11-08 00:36:58,525 [ scc.merge] INFO Already up to date. 2024-11-08 00:36:58,525 [ scc.merge] INFO 2024-11-08 00:36:58,525 [ scc.merge] INFO Merged PRs: 2024-11-08 00:36:58,525 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2024-11-08 00:36:58,525 [ scc.merge] INFO 2024-11-08 00:36:58,525 [ scc.merge] INFO Repository: ome/omero-py 2024-11-08 00:36:58,525 [ scc.merge] INFO Excluded PRs: 2024-11-08 00:36:58,525 [ scc.merge] INFO - PR 429 jo-mueller 'move `repr_html` to `_ImageWrapper`' (user: jo-mueller) 2024-11-08 00:36:58,525 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2024-11-08 00:36:58,525 [ scc.merge] INFO - PR 387 will-moore 'Numpy pixels type' (label: exclude) 2024-11-08 00:36:58,525 [ scc.merge] INFO - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn) 2024-11-08 00:36:58,525 [ scc.merge] INFO - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft) 2024-11-08 00:36:58,525 [ scc.merge] INFO - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment) 2024-11-08 00:36:58,526 [ scc.merge] INFO Already up to date. 2024-11-08 00:36:58,526 [ scc.merge] INFO 2024-11-08 00:36:58,526 [ scc.merge] INFO Merged PRs: 2024-11-08 00:36:58,526 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2024-11-08 00:36:58,526 [ scc.merge] INFO - PR 207 manics 'BlitzGateway.connect raise on error' 2024-11-08 00:36:58,526 [ scc.merge] INFO - PR 266 joshmoore 'errors: use raise_error from cli plugins' 2024-11-08 00:36:58,526 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' 2024-11-08 00:36:58,526 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2024-11-08 00:36:58,526 [ scc.merge] INFO - PR 337 will-moore 'bulk.yml depth is passed to xargs' 2024-11-08 00:36:58,526 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2024-11-08 00:36:58,526 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method' 2024-11-08 00:36:58,526 [ scc.merge] INFO - PR 427 Rdornier 'Add fileset folder creation' 2024-11-08 00:36:58,526 [ scc.merge] INFO - PR 431 sbesson 'omero.HdfStorage.update: add size check on data.rowNumbers' 2024-11-08 00:36:58,526 [ scc.merge] INFO 2024-11-08 00:36:58,526 [ scc.merge] INFO Repository: ome/omero-scripts 2024-11-08 00:36:58,526 [ scc.merge] INFO Excluded PRs: 2024-11-08 00:36:58,526 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT) 2024-11-08 00:36:58,526 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier) 2024-11-08 00:36:58,526 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2024-11-08 00:36:58,526 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2024-11-08 00:36:58,526 [ scc.merge] INFO Already up to date. 2024-11-08 00:36:58,526 [ scc.merge] INFO 2024-11-08 00:36:58,526 [ scc.merge] INFO Merged PRs: 2024-11-08 00:36:58,526 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2024-11-08 00:36:58,526 [ scc.merge] INFO 2024-11-08 00:36:58,526 [ scc.merge] INFO Conflicting PRs (not included): 2024-11-08 00:36:58,526 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2024-11-08 00:36:58,526 [ scc.merge] INFO 2024-11-08 00:36:58,526 [ scc.merge] INFO Repository: ome/omero-web 2024-11-08 00:36:58,526 [ scc.merge] INFO Excluded PRs: 2024-11-08 00:36:58,526 [ scc.merge] INFO - PR 585 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2024-11-08 00:36:58,526 [ scc.merge] INFO - PR 581 Tom-TBT 'Dynamic generation of the LUTs png ' (user: Tom-TBT) 2024-11-08 00:36:58,526 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2024-11-08 00:36:58,526 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) 2024-11-08 00:36:58,527 [ scc.merge] INFO Already up to date. 2024-11-08 00:36:58,527 [ scc.merge] INFO 2024-11-08 00:36:58,527 [ scc.merge] INFO Merged PRs: 2024-11-08 00:36:58,527 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2024-11-08 00:36:58,527 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2024-11-08 00:36:58,527 [ scc.merge] INFO - PR 583 DavidStirling 'Allow users to click a group name to quick-switch to that group' 2024-11-08 00:36:58,527 [ scc.merge] INFO - PR 590 knabar 'Update changelog' 2024-11-08 00:36:58,527 [ scc.merge] INFO - PR 591 jburel 'Action update' 2024-11-08 00:36:58,527 [ scc.merge] INFO - PR 592 jburel 'Replace pkg_resources' 2024-11-08 00:36:58,527 [ scc.merge] INFO - PR 594 knabar 'Add minimum batch size to avoid infinite loop due to zero batch size' 2024-11-08 00:36:58,527 [ scc.merge] INFO 2024-11-08 00:36:58,527 [ scc.merge] DEBUG Cleaning remote branches created for merging 2024-11-08 00:36:58,527 [ scc.git] DEBUG Calling 'git remote' 2024-11-08 00:36:58,531 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2024-11-08 00:36:58,531 [ scc.git] DEBUG Calling 'git remote' 2024-11-08 00:36:58,535 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-08 00:36:58,535 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2024-11-08 00:36:58,535 [ scc.git] DEBUG Calling 'git remote' 2024-11-08 00:36:58,538 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-08 00:36:58,539 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2024-11-08 00:36:58,539 [ scc.git] DEBUG Calling 'git remote' 2024-11-08 00:36:58,542 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-08 00:36:58,542 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2024-11-08 00:36:58,543 [ scc.git] DEBUG Calling 'git remote' 2024-11-08 00:36:58,546 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2024-11-08 00:36:58,546 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2024-11-08 00:36:58,546 [ scc.git] DEBUG Calling 'git remote' 2024-11-08 00:36:58,550 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen return opener.open(url, data, timeout) File "/usr/lib64/python3.9/urllib/request.py", line 523, in open response = meth(req, response) File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response response = self.parent.error( File "/usr/lib64/python3.9/urllib/request.py", line 561, in error return self._call_chain(*args) File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain result = func(*args) File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen return opener.open(url, data, timeout) File "/usr/lib64/python3.9/urllib/request.py", line 523, in open response = meth(req, response) File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response response = self.parent.error( File "/usr/lib64/python3.9/urllib/request.py", line 561, in error return self._call_chain(*args) File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain result = func(*args) File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from a4307f4 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from cca4c2f nothing to commit, working tree clean Entering 'omero-py' HEAD detached from 4fd72efa nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 312afbe nothing to commit, working tree clean Entering 'omero-web' HEAD detached from 213bb61ad nothing to commit, working tree clean HEAD detached from e849d72 nothing to commit, working tree clean 2024-11-08 00:37:25,619 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS