![[Jenkins]](/jenkins/static/9bac06d9/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 600 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision e505e4936e5c9bb70e5ff78e9177f491ec55c92d (refs/remotes/origin/master) Commit message: "Merge pull request #328 from ome/dependabot/submodules/omero-py-70b6235" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f e505e4936e5c9bb70e5ff78e9177f491ec55c92d # timeout=10 > git rev-list --no-walk e505e4936e5c9bb70e5ff78e9177f491ec55c92d # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 532 [Pipeline] sh + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - > git submodule update --init --recursive omero-marshal # timeout=10 > git submodule update --init --recursive omero-dropbox # timeout=10 > git submodule update --init --recursive omero-scripts # timeout=10 + popd ~/workspace/OMERO-python-superbuild-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-25.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-25.2 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.7.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.15-py3-none-any.whl.metadata (25 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-45.0.6-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.14 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting pycparser (from cffi>=1.14->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (36 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2025.8.3-py3-none-any.whl.metadata (2.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.7.0-py3-none-any.whl (416 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached cryptography-45.0.6-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (467 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (762 kB) Using cached requests-2.32.5-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (150 kB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached certifi-2025.8.3-py3-none-any.whl (161 kB) Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Using cached ruamel.yaml-0.18.15-py3-none-any.whl (119 kB) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (739 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.7.0 PyYAML-6.0.2 certifi-2025.8.3 cffi-1.17.1 charset_normalizer-3.4.3 cryptography-45.0.6 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.5 ruamel.yaml-0.18.15 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-08-28 00:41:19,916 [ scc.config] DEBUG Found github.token 2025-08-28 00:41:19,917 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:20,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 00:41:20,518 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:20,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 00:41:21,095 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:21,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-08-28 00:41:21,287 [ scc.gh] DEBUG 4380 remaining from 5000 (Reset at 00:08 2025-08-28 00:41:21,287 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-28 00:41:21,290 [ scc.git] DEBUG Check current status 2025-08-28 00:41:21,290 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-28 00:41:21,293 [ scc.git] DEBUG e505e49 Merge pull request #328 from ome/dependabot/submodules/omero-py-70b6235 2025-08-28 00:41:21,293 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-28 00:41:21,337 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-08-28 00:41:21,340 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-08-28 00:41:21,345 [ scc.git] DEBUG 70b6235a7283f1729225c4c3c24f01dfe97ae12b omero-py (v5.21.0-5-g70b6235a) 2025-08-28 00:41:21,350 [ scc.git] DEBUG 573db340d5d1429fa17c7e486206948412a7c150 omero-scripts (v5.9.1-1-g573db34) 2025-08-28 00:41:21,356 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-08-28 00:41:21,359 [ scc.config] DEBUG Found remote.origin.url 2025-08-28 00:41:21,539 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:22,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-08-28 00:41:22,457 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:22,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-28 00:41:22,996 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:23,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-28 00:41:23,618 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:23,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-28 00:41:24,134 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:25,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-28 00:41:25,628 [ scc.git] DEBUG Resetting... 2025-08-28 00:41:25,628 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-08-28 00:41:26,632 [ scc.git] DEBUG HEAD is now at e505e49 Merge pull request #328 from ome/dependabot/submodules/omero-py-70b6235 2025-08-28 00:41:26,632 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-08-28 00:41:26,692 [ scc.git] DEBUG Check current status 2025-08-28 00:41:26,692 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-28 00:41:26,695 [ scc.git] DEBUG e505e49 Merge pull request #328 from ome/dependabot/submodules/omero-py-70b6235 2025-08-28 00:41:26,695 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-28 00:41:26,738 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-08-28 00:41:26,742 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-08-28 00:41:26,747 [ scc.git] DEBUG 70b6235a7283f1729225c4c3c24f01dfe97ae12b omero-py (v5.21.0-5-g70b6235a) 2025-08-28 00:41:26,751 [ scc.git] DEBUG 573db340d5d1429fa17c7e486206948412a7c150 omero-scripts (v5.9.1-1-g573db34) 2025-08-28 00:41:26,756 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-08-28 00:41:26,756 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-08-28 00:41:26,756 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-08-28 00:41:26,756 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-08-28 00:41:26,757 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-08-28 00:41:26,757 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-08-28 00:41:26,757 [ scc.repo] DEBUG ## PRs found: 2025-08-28 00:41:26,759 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:27,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2025-08-28 00:41:27,062 [ scc.repo] DEBUG ## Branches found: 2025-08-28 00:41:27,062 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 00:41:27,062 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:41:27,064 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-28 00:41:27,066 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-28 00:41:27,067 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-28 00:41:27,069 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-28 00:41:27,072 [ scc.git] DEBUG Already up to date. 2025-08-28 00:41:27,072 [ scc.git] DEBUG ## Unique users: [] 2025-08-28 00:41:27,072 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 00:41:27,072 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:41:27,075 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-28 00:41:27,118 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 00:41:27,118 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:41:27,120 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-28 00:41:27,154 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fabd92a1210> has no local changes 2025-08-28 00:41:27,155 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Generated by OMERO-python-superbuild-push#504 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/504/)' 2025-08-28 00:41:28,051 [ scc.git] DEBUG [detached HEAD bc5e219] merge master -Dorg -Snone 2025-08-28 00:41:28,051 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-08-28 00:41:28,051 [ scc.merge] INFO Already up to date. 2025-08-28 00:41:28,051 [ scc.merge] INFO 2025-08-28 00:41:28,051 [ scc.merge] INFO 2025-08-28 00:41:28,051 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-08-28 00:41:28,051 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-08-28 00:41:30,128 [ scc.config] DEBUG Found github.token 2025-08-28 00:41:30,129 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:30,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 00:41:31,004 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:31,312 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 00:41:31,564 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:31,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-08-28 00:41:31,851 [ scc.gh] DEBUG 4372 remaining from 5000 (Reset at 00:08 2025-08-28 00:41:31,851 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-28 00:41:31,854 [ scc.git] DEBUG Check current status 2025-08-28 00:41:31,854 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-28 00:41:31,856 [ scc.git] DEBUG bc5e219 merge master -Dorg -Snone 2025-08-28 00:41:31,857 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-28 00:41:31,901 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-08-28 00:41:31,904 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-08-28 00:41:31,909 [ scc.git] DEBUG 70b6235a7283f1729225c4c3c24f01dfe97ae12b omero-py (v5.21.0-5-g70b6235a) 2025-08-28 00:41:31,914 [ scc.git] DEBUG 573db340d5d1429fa17c7e486206948412a7c150 omero-scripts (v5.9.1-1-g573db34) 2025-08-28 00:41:31,918 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-08-28 00:41:31,921 [ scc.config] DEBUG Found remote.origin.url 2025-08-28 00:41:31,921 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-08-28 00:41:31,922 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-08-28 00:41:32,103 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:32,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-08-28 00:41:33,204 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:33,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-28 00:41:33,782 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:34,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-28 00:41:34,282 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:34,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-28 00:41:34,800 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:35,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-28 00:41:35,169 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 00:41:35,222 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-08-28 00:41:35,222 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-28 00:41:35,224 [ scc.git] DEBUG Check current status 2025-08-28 00:41:35,224 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-28 00:41:35,227 [ scc.git] DEBUG 01fa0c5 Merge pull request #24 from jburel/build 2025-08-28 00:41:35,227 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-28 00:41:35,270 [ scc.config] DEBUG Found remote.origin.url 2025-08-28 00:41:35,421 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:35,735 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2025-08-28 00:41:35,987 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:36,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-28 00:41:36,512 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:36,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-28 00:41:36,993 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:37,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-28 00:41:37,475 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:38,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-28 00:41:38,018 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 00:41:38,060 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-28 00:41:38,060 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-08-28 00:41:38,060 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-28 00:41:38,063 [ scc.git] DEBUG Check current status 2025-08-28 00:41:38,063 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-28 00:41:38,065 [ scc.git] DEBUG 6d44f66 Merge pull request #82 from jburel/build 2025-08-28 00:41:38,066 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-28 00:41:38,108 [ scc.config] DEBUG Found remote.origin.url 2025-08-28 00:41:38,270 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:38,682 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2025-08-28 00:41:38,934 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:39,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-28 00:41:39,787 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:40,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-28 00:41:40,329 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:40,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-28 00:41:41,188 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:41,476 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-28 00:41:41,477 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 00:41:41,519 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-28 00:41:41,520 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-08-28 00:41:41,520 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-28 00:41:41,522 [ scc.git] DEBUG Check current status 2025-08-28 00:41:41,522 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-28 00:41:41,525 [ scc.git] DEBUG 70b6235a Merge pull request #464 from dominikl/map_anno_wrapper 2025-08-28 00:41:41,525 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-28 00:41:41,569 [ scc.config] DEBUG Found remote.origin.url 2025-08-28 00:41:41,729 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:42,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2025-08-28 00:41:42,445 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:42,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-28 00:41:42,979 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:43,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-28 00:41:43,489 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:43,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-28 00:41:43,958 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:44,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-28 00:41:44,192 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 00:41:44,234 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-28 00:41:44,235 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-08-28 00:41:44,235 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-28 00:41:44,237 [ scc.git] DEBUG Check current status 2025-08-28 00:41:44,237 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-28 00:41:44,240 [ scc.git] DEBUG 573db34 Bump version: 5.9.1 → 5.9.2.dev0 2025-08-28 00:41:44,240 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-28 00:41:44,283 [ scc.config] DEBUG Found remote.origin.url 2025-08-28 00:41:44,283 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-08-28 00:41:44,444 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:44,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2025-08-28 00:41:45,134 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:45,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-28 00:41:45,654 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:45,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-28 00:41:46,148 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:46,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-28 00:41:46,796 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:47,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-28 00:41:47,316 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 00:41:47,358 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-28 00:41:47,358 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-08-28 00:41:47,358 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-28 00:41:47,361 [ scc.git] DEBUG Check current status 2025-08-28 00:41:47,361 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-28 00:41:47,364 [ scc.git] DEBUG 2a7c4d2e3 Bump version: 5.29.2 → 5.29.3.dev0 2025-08-28 00:41:47,364 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-28 00:41:47,406 [ scc.config] DEBUG Found remote.origin.url 2025-08-28 00:41:47,568 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:47,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2025-08-28 00:41:48,152 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:48,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-28 00:41:48,648 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:48,989 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-28 00:41:49,242 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:49,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-28 00:41:49,839 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:50,126 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-28 00:41:50,127 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 00:41:50,168 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-28 00:41:50,169 [ scc.git] DEBUG Resetting... 2025-08-28 00:41:50,169 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-08-28 00:41:50,173 [ scc.git] DEBUG HEAD is now at bc5e219 merge master -Dorg -Snone 2025-08-28 00:41:50,173 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-08-28 00:41:50,228 [ scc.git] DEBUG Check current status 2025-08-28 00:41:50,229 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-28 00:41:50,231 [ scc.git] DEBUG bc5e219 merge master -Dorg -Snone 2025-08-28 00:41:50,231 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-28 00:41:50,273 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-08-28 00:41:50,276 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-08-28 00:41:50,281 [ scc.git] DEBUG 70b6235a7283f1729225c4c3c24f01dfe97ae12b omero-py (v5.21.0-5-g70b6235a) 2025-08-28 00:41:50,285 [ scc.git] DEBUG 573db340d5d1429fa17c7e486206948412a7c150 omero-scripts (v5.9.1-1-g573db34) 2025-08-28 00:41:50,290 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-08-28 00:41:50,291 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-08-28 00:41:50,291 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-08-28 00:41:50,291 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-08-28 00:41:50,291 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-08-28 00:41:50,291 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-08-28 00:41:50,291 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-08-28 00:41:50,291 [ scc.repo] DEBUG ## PRs found: 2025-08-28 00:41:50,379 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:50,623 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2025-08-28 00:41:50,624 [ scc.repo] DEBUG ## Branches found: 2025-08-28 00:41:50,624 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 00:41:50,624 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:41:50,626 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-28 00:41:50,628 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-28 00:41:50,628 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-28 00:41:50,631 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-28 00:41:50,634 [ scc.git] DEBUG Already up to date. 2025-08-28 00:41:50,634 [ scc.git] DEBUG ## Unique users: [] 2025-08-28 00:41:50,634 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 00:41:50,634 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:41:50,636 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-28 00:41:50,678 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 00:41:50,678 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:41:50,680 [ scc.repo] DEBUG ## PRs found: 2025-08-28 00:41:50,876 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:51,291 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2025-08-28 00:41:51,544 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:51,926 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2025-08-28 00:41:52,178 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:52,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2025-08-28 00:41:53,090 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:53,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-08-28 00:41:53,704 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:54,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 00:41:54,282 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:54,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-08-28 00:41:54,800 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:55,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2025-08-28 00:41:55,191 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-08-28 00:41:55,191 [ scc.repo] DEBUG ## Branches found: 2025-08-28 00:41:55,191 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-08-28 00:41:55,191 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 00:41:55,191 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:41:55,194 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-28 00:41:55,197 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-28 00:41:55,197 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-28 00:41:55,200 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-28 00:41:55,203 [ scc.git] DEBUG Already up to date. 2025-08-28 00:41:55,203 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2025-08-28 00:41:55,742 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2025-08-28 00:41:55,743 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2025-08-28 00:41:55,747 [ scc.git] DEBUG ## Unique users: [] 2025-08-28 00:41:55,748 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 00:41:55,748 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:41:55,750 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-08-28 00:41:55,753 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:41:55,756 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-08-28 00:41:55,769 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2025-08-28 00:41:55,769 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2025-08-28 00:41:55,769 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2025-08-28 00:41:55,769 [ scc.git] DEBUG Auto-merging src/fsLists.py 2025-08-28 00:41:55,769 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2025-08-28 00:41:55,769 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2025-08-28 00:41:55,769 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2025-08-28 00:41:55,769 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2025-08-28 00:41:55,769 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2025-08-28 00:41:55,770 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 00:41:55,774 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2025-08-28 00:41:55,774 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2025-08-28 00:41:55,774 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2025-08-28 00:41:55,774 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2025-08-28 00:41:55,774 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2025-08-28 00:41:55,774 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2025-08-28 00:41:55,774 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2025-08-28 00:41:55,774 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2025-08-28 00:41:55,774 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2025-08-28 00:41:55,776 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2025-08-28 00:41:55,776 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:56,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 00:41:56,039 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-28 00:41:56,081 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 00:41:56,081 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:41:56,083 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 00:41:56,122 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-28 00:41:56,127 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9126e69c10> has no local changes 2025-08-28 00:41:56,127 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Generated by OMERO-python-superbuild-push#504 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/504/)' 2025-08-28 00:41:56,134 [ scc.git] DEBUG [detached HEAD 4779b7f] merge master -Dorg -Ssuccess-only 2025-08-28 00:41:56,134 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-28 00:41:56,134 [ scc.repo] DEBUG ## PRs found: 2025-08-28 00:41:56,292 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:56,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2025-08-28 00:41:56,951 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:57,426 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None 2025-08-28 00:41:57,679 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:57,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None 2025-08-28 00:41:58,189 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:58,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2025-08-28 00:41:58,795 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:41:59,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2025-08-28 00:41:59,271 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:00,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-08-28 00:42:01,094 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:01,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 00:42:01,906 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:02,279 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-08-28 00:42:02,531 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:02,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2025-08-28 00:42:02,742 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2025-08-28 00:42:02,993 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:03,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2025-08-28 00:42:03,762 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:04,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2025-08-28 00:42:04,364 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:04,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2025-08-28 00:42:04,871 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:05,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2025-08-28 00:42:05,387 [ scc.repo] DEBUG ## Branches found: 2025-08-28 00:42:05,387 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-08-28 00:42:05,387 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 00:42:05,387 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:42:05,390 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-28 00:42:05,393 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-28 00:42:05,393 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-28 00:42:05,396 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-28 00:42:05,399 [ scc.git] DEBUG Already up to date. 2025-08-28 00:42:05,399 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2025-08-28 00:42:05,711 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2025-08-28 00:42:05,711 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2025-08-28 00:42:05,716 [ scc.git] DEBUG ## Unique users: [] 2025-08-28 00:42:05,716 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 00:42:05,716 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:42:05,718 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-08-28 00:42:05,722 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:42:05,724 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-08-28 00:42:05,734 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2025-08-28 00:42:05,735 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 00:42:05,738 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2025-08-28 00:42:05,738 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2025-08-28 00:42:05,738 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2025-08-28 00:42:05,741 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:06,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 00:42:06,397 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-28 00:42:06,438 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 00:42:06,438 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:42:06,441 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 00:42:06,479 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-28 00:42:06,484 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f91249b03d0> has no local changes 2025-08-28 00:42:06,484 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Generated by OMERO-python-superbuild-push#504 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/504/)' 2025-08-28 00:42:06,490 [ scc.git] DEBUG [detached HEAD 4e7509f] merge master -Dorg -Ssuccess-only 2025-08-28 00:42:06,490 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-28 00:42:06,491 [ scc.repo] DEBUG ## PRs found: 2025-08-28 00:42:06,649 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:07,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2025-08-28 00:42:07,384 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:07,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/472 HTTP/1.1" 200 None 2025-08-28 00:42:08,020 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:08,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/472/comments HTTP/1.1" 200 None 2025-08-28 00:42:08,591 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:08,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fbcef67768f4e37313bc42a18b5fb078964fcf64 HTTP/1.1" 200 None 2025-08-28 00:42:09,122 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:09,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fbcef67768f4e37313bc42a18b5fb078964fcf64/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 00:42:09,789 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:10,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fbcef67768f4e37313bc42a18b5fb078964fcf64/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 00:42:10,320 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:10,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fbcef67768f4e37313bc42a18b5fb078964fcf64 HTTP/1.1" 200 None 2025-08-28 00:42:10,896 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:11,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/fbcef67768f4e37313bc42a18b5fb078964fcf64?per_page=1 HTTP/1.1" 200 None 2025-08-28 00:42:11,365 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:11,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fbcef67768f4e37313bc42a18b5fb078964fcf64 HTTP/1.1" 200 None 2025-08-28 00:42:12,151 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:12,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fbcef67768f4e37313bc42a18b5fb078964fcf64/status HTTP/1.1" 200 None 2025-08-28 00:42:12,421 [ scc.repo] DEBUG - PR 472 sbesson 'Remove PyOpenSSL injection via urllib3' 2025-08-28 00:42:12,673 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:12,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470 HTTP/1.1" 200 None 2025-08-28 00:42:13,216 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:13,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470/comments HTTP/1.1" 200 None 2025-08-28 00:42:13,749 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:14,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459 HTTP/1.1" 200 None 2025-08-28 00:42:14,275 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:14,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450 HTTP/1.1" 200 None 2025-08-28 00:42:14,847 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:15,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450/comments HTTP/1.1" 200 None 2025-08-28 00:42:15,369 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:15,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443 HTTP/1.1" 200 None 2025-08-28 00:42:15,930 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:16,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443/comments HTTP/1.1" 200 None 2025-08-28 00:42:16,261 [ scc.repo] DEBUG # ... Exclude label: exclude 2025-08-28 00:42:16,513 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:17,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None 2025-08-28 00:42:18,138 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:18,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None 2025-08-28 00:42:18,655 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:19,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-08-28 00:42:19,453 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:19,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 00:42:19,975 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:20,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-08-28 00:42:20,506 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:20,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 2 2025-08-28 00:42:20,709 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method' 2025-08-28 00:42:20,961 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:21,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2025-08-28 00:42:21,538 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:21,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2025-08-28 00:42:22,021 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:22,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2025-08-28 00:42:22,640 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:22,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 00:42:23,161 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:23,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 00:42:23,686 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:23,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2025-08-28 00:42:24,248 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:24,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None 2025-08-28 00:42:24,799 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:25,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-08-28 00:42:25,443 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:25,679 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 00:42:25,931 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:26,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-08-28 00:42:26,982 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:27,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2 2025-08-28 00:42:27,311 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2025-08-28 00:42:27,563 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:28,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2025-08-28 00:42:28,326 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:28,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2025-08-28 00:42:28,853 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:29,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-08-28 00:42:29,475 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:29,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 00:42:29,969 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:30,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-08-28 00:42:30,501 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:30,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 2 2025-08-28 00:42:30,725 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2025-08-28 00:42:30,977 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:31,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2025-08-28 00:42:31,468 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:31,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2025-08-28 00:42:31,986 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:32,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2025-08-28 00:42:32,576 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:32,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2025-08-28 00:42:33,127 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:33,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-08-28 00:42:33,772 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:34,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 00:42:34,366 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:34,973 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-08-28 00:42:35,226 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:35,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2025-08-28 00:42:35,436 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2025-08-28 00:42:35,437 [ scc.repo] DEBUG ## Branches found: 2025-08-28 00:42:35,437 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-08-28 00:42:35,437 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 00:42:35,437 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:42:35,440 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-28 00:42:35,443 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-28 00:42:35,443 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-28 00:42:35,446 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-28 00:42:35,449 [ scc.git] DEBUG Already up to date. 2025-08-28 00:42:35,450 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2025-08-28 00:42:35,931 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-08-28 00:42:35,931 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2025-08-28 00:42:35,936 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2025-08-28 00:42:36,261 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-08-28 00:42:36,261 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2025-08-28 00:42:36,265 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2025-08-28 00:42:36,607 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-08-28 00:42:36,607 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2025-08-28 00:42:36,612 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2025-08-28 00:42:36,908 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-08-28 00:42:36,908 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2025-08-28 00:42:36,912 [ scc.git] DEBUG Calling 'git fetch origin pull/472/head' 2025-08-28 00:42:37,206 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-08-28 00:42:37,206 [ scc.git] DEBUG * branch refs/pull/472/head -> FETCH_HEAD 2025-08-28 00:42:37,211 [ scc.git] DEBUG ## Unique users: [] 2025-08-28 00:42:37,211 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 00:42:37,211 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:42:37,213 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-08-28 00:42:37,226 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:42:37,229 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-08-28 00:42:37,251 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2025-08-28 00:42:37,251 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2025-08-28 00:42:37,253 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 00:42:37,257 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2025-08-28 00:42:37,257 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2025-08-28 00:42:37,257 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2025-08-28 00:42:37,260 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:38,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 00:42:38,542 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-08-28 00:42:38,556 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:42:38,558 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-08-28 00:42:38,579 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 00:42:38,582 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2025-08-28 00:42:38,582 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2025-08-28 00:42:38,582 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2025-08-28 00:42:38,582 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2025-08-28 00:42:38,582 [ scc.git] DEBUG create mode 100644 connect.py 2025-08-28 00:42:38,794 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:39,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 00:42:39,481 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2025-08-28 00:42:39,494 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:42:39,497 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2025-08-28 00:42:39,520 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2025-08-28 00:42:39,521 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 00:42:39,525 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2025-08-28 00:42:39,525 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2025-08-28 00:42:39,733 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:40,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 00:42:40,163 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-08-28 00:42:40,176 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:42:40,178 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-08-28 00:42:40,212 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-08-28 00:42:40,213 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 00:42:40,220 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------ 2025-08-28 00:42:40,220 [ scc.git] DEBUG 1 file changed, 36 deletions(-) 2025-08-28 00:42:40,415 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:40,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 00:42:40,651 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fbcef67768f4e37313bc42a18b5fb078964fcf64' 2025-08-28 00:42:40,665 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:42:40,667 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 472 (Remove PyOpenSSL injection via urllib3) fbcef67768f4e37313bc42a18b5fb078964fcf64' 2025-08-28 00:42:40,692 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 00:42:40,695 [ scc.git] DEBUG setup.py | 1 - 2025-08-28 00:42:40,695 [ scc.git] DEBUG src/omero/util/upgrade_check.py | 7 ------- 2025-08-28 00:42:40,695 [ scc.git] DEBUG 2 files changed, 8 deletions(-) 2025-08-28 00:42:40,903 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:41,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 00:42:41,101 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-28 00:42:41,142 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 00:42:41,143 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:42:41,145 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 00:42:41,184 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-28 00:42:41,191 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9124688510> has no local changes 2025-08-28 00:42:41,191 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 470 multimeric 'Faux import' (user: multimeric) - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 472 sbesson 'Remove PyOpenSSL injection via urllib3' Generated by OMERO-python-superbuild-push#504 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/504/)' 2025-08-28 00:42:41,199 [ scc.git] DEBUG [detached HEAD 4e6d8d8d] merge master -Dorg -Ssuccess-only 2025-08-28 00:42:41,199 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-28 00:42:41,199 [ scc.git] INFO Overriding base-branch from master to develop 2025-08-28 00:42:41,199 [ scc.repo] DEBUG ## PRs found: 2025-08-28 00:42:41,354 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:41,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-08-28 00:42:42,012 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:42,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-08-28 00:42:42,540 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:42,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-08-28 00:42:43,068 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:43,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-08-28 00:42:43,640 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:44,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 00:42:44,326 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:44,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 00:42:44,824 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:45,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-08-28 00:42:45,704 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:45,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-08-28 00:42:45,940 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-08-28 00:42:46,191 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:46,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-08-28 00:42:46,694 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:46,963 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-08-28 00:42:47,215 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:47,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-08-28 00:42:47,819 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:48,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 00:42:48,388 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:48,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-08-28 00:42:49,092 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:49,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-08-28 00:42:49,320 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-08-28 00:42:49,571 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:49,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-08-28 00:42:50,134 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:50,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-08-28 00:42:51,159 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:51,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-08-28 00:42:51,724 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:52,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-08-28 00:42:52,052 [ scc.repo] DEBUG ## Branches found: 2025-08-28 00:42:52,052 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-08-28 00:42:52,052 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 00:42:52,052 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:42:52,055 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-08-28 00:42:52,057 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-28 00:42:52,058 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-08-28 00:42:52,061 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-08-28 00:42:52,064 [ scc.git] DEBUG Already up to date. 2025-08-28 00:42:52,064 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-08-28 00:42:52,506 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-08-28 00:42:52,506 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-08-28 00:42:52,510 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-08-28 00:42:53,225 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-08-28 00:42:53,225 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-08-28 00:42:53,230 [ scc.git] DEBUG ## Unique users: [] 2025-08-28 00:42:53,230 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 00:42:53,230 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:42:53,233 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-08-28 00:42:53,238 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:42:53,241 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-08-28 00:42:53,251 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-08-28 00:42:53,252 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-28 00:42:53,252 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-28 00:42:53,255 [ scc.git] DEBUG Calling 'git reset --hard 573db340d5d1429fa17c7e486206948412a7c150' 2025-08-28 00:42:53,259 [ scc.git] DEBUG HEAD is now at 573db34 Bump version: 5.9.1 → 5.9.2.dev0 2025-08-28 00:42:53,261 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:53,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 00:42:53,498 [ scc.git] DEBUG Calling 'git merge-base 573db340d5d1429fa17c7e486206948412a7c150 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-08-28 00:42:53,504 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..573db340d5d1429fa17c7e486206948412a7c150' 2025-08-28 00:42:53,508 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#504](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/504/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/504/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-08-28 00:42:53,510 [ scc.config] DEBUG Found github.token 2025-08-28 00:42:53,510 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-08-28 00:42:53,510 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-08-28 00:42:53,515 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:42:53,518 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-08-28 00:42:53,528 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 00:42:53,531 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-08-28 00:42:53,531 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-08-28 00:42:53,750 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:54,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 00:42:54,001 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-28 00:42:54,043 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 00:42:54,043 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:42:54,045 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 00:42:54,086 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-28 00:42:54,090 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9124723b90> has no local changes 2025-08-28 00:42:54,090 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#504 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/504/)' 2025-08-28 00:42:54,097 [ scc.git] DEBUG [detached HEAD fb93bfa] merge master -Dorg -Ssuccess-only 2025-08-28 00:42:54,097 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-28 00:42:54,097 [ scc.repo] DEBUG ## PRs found: 2025-08-28 00:42:54,254 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:54,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2025-08-28 00:42:55,018 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:55,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/629 HTTP/1.1" 200 None 2025-08-28 00:42:55,540 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:55,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/628 HTTP/1.1" 200 None 2025-08-28 00:42:56,063 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:56,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None 2025-08-28 00:42:56,639 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:56,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 00:42:57,169 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:57,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 00:42:57,766 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:58,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None 2025-08-28 00:42:59,039 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:59,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/b8c7989c9900270d7cf27523f2649bbb903c7a60?per_page=1 HTTP/1.1" 200 None 2025-08-28 00:42:59,511 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:42:59,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None 2025-08-28 00:43:00,000 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:00,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/status HTTP/1.1" 200 None 2025-08-28 00:43:00,258 [ scc.repo] DEBUG - PR 628 jburel 'Add protocol required since Django4' 2025-08-28 00:43:00,510 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:00,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/619 HTTP/1.1" 200 None 2025-08-28 00:43:01,160 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:01,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-08-28 00:43:01,774 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:02,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 00:43:02,272 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:02,572 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 00:43:02,824 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:03,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-08-28 00:43:03,338 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:03,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/6dbfcebfee72e20f36a434fdc8850930d89acdac?per_page=1 HTTP/1.1" 200 None 2025-08-28 00:43:03,827 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:04,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-08-28 00:43:04,299 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:04,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/status HTTP/1.1" 200 None 2025-08-28 00:43:04,627 [ scc.repo] DEBUG - PR 619 DavidStirling 'Permit subpackages as app plugins' 2025-08-28 00:43:04,879 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:05,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613 HTTP/1.1" 200 None 2025-08-28 00:43:05,426 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:05,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613/comments HTTP/1.1" 200 None 2025-08-28 00:43:06,220 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:06,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None 2025-08-28 00:43:06,809 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:07,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 00:43:07,402 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:07,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 00:43:07,928 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:08,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None 2025-08-28 00:43:08,531 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:08,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/cca34cb278cac5fb8088df75cc4fe5f315810342?per_page=1 HTTP/1.1" 200 None 2025-08-28 00:43:09,035 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:09,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None 2025-08-28 00:43:09,616 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:09,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/status HTTP/1.1" 200 None 2025-08-28 00:43:09,842 [ scc.repo] DEBUG - PR 613 will-moore 'externalInfo display' 2025-08-28 00:43:10,093 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:10,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612 HTTP/1.1" 200 None 2025-08-28 00:43:10,710 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:11,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612/comments HTTP/1.1" 200 None 2025-08-28 00:43:11,619 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:12,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-08-28 00:43:12,362 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:12,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 00:43:12,878 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:13,322 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 00:43:13,575 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:13,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-08-28 00:43:14,194 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:14,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06446bf912b361c22e46c5a0678b3146b91e7e26?per_page=1 HTTP/1.1" 200 None 2025-08-28 00:43:15,035 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:15,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-08-28 00:43:15,580 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:15,913 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/status HTTP/1.1" 200 None 2025-08-28 00:43:15,913 [ scc.repo] DEBUG - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-08-28 00:43:16,165 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:16,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None 2025-08-28 00:43:16,715 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:17,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None 2025-08-28 00:43:17,272 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:17,902 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-08-28 00:43:18,155 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:18,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 00:43:18,889 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:19,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 00:43:19,460 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:19,872 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-08-28 00:43:20,125 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:20,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None 2025-08-28 00:43:21,086 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:21,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-08-28 00:43:21,656 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:21,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None 2025-08-28 00:43:21,985 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf' 2025-08-28 00:43:22,237 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:22,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None 2025-08-28 00:43:22,834 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:23,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-08-28 00:43:23,401 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:23,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 00:43:23,920 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:24,245 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 00:43:24,498 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:24,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-08-28 00:43:24,996 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:25,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 None 2025-08-28 00:43:25,610 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:26,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-08-28 00:43:26,283 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:26,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/status HTTP/1.1" 200 None 2025-08-28 00:43:26,897 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations' 2025-08-28 00:43:27,148 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:27,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596 HTTP/1.1" 200 None 2025-08-28 00:43:27,692 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:27,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596/comments HTTP/1.1" 200 None 2025-08-28 00:43:28,199 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:28,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-08-28 00:43:28,769 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:29,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 00:43:29,279 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:29,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 00:43:29,892 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:30,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-08-28 00:43:30,614 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:30,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/3aae48f586d7b412538a45b34ddc471a26a286e8?per_page=1 HTTP/1.1" 200 None 2025-08-28 00:43:31,090 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:31,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-08-28 00:43:31,590 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:31,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/status HTTP/1.1" 200 None 2025-08-28 00:43:31,821 [ scc.repo] DEBUG - PR 596 sukunis 'Linkify can parse anchor tag' 2025-08-28 00:43:32,072 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:32,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595 HTTP/1.1" 200 None 2025-08-28 00:43:32,600 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:32,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595/comments HTTP/1.1" 200 None 2025-08-28 00:43:33,150 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:33,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-08-28 00:43:34,098 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:34,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 00:43:34,626 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:34,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-28 00:43:35,162 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:35,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-08-28 00:43:36,035 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:36,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/30278b64bb39134a3f1101b600d4a82256e6eaeb?per_page=1 HTTP/1.1" 200 None 2025-08-28 00:43:36,586 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:36,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-08-28 00:43:37,055 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:37,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/status HTTP/1.1" 200 None 2025-08-28 00:43:37,373 [ scc.repo] DEBUG - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-08-28 00:43:37,625 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:37,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2025-08-28 00:43:38,214 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:38,851 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None 2025-08-28 00:43:39,103 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:39,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2025-08-28 00:43:39,642 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:39,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2025-08-28 00:43:40,209 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:40,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-08-28 00:43:40,798 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:41,028 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 00:43:41,280 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:41,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-08-28 00:43:41,791 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:42,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 2 2025-08-28 00:43:42,054 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-08-28 00:43:42,306 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:42,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2025-08-28 00:43:42,888 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:43,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2025-08-28 00:43:43,386 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:43,690 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-08-28 00:43:43,943 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:44,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 00:43:44,430 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:44,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-08-28 00:43:45,023 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:45,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 2 2025-08-28 00:43:45,306 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2025-08-28 00:43:45,558 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:45,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2025-08-28 00:43:46,130 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:46,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2025-08-28 00:43:46,615 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:46,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2025-08-28 00:43:47,163 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:47,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-28 00:43:47,748 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:48,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2025-08-28 00:43:48,296 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:48,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06b0073db19eeccb9698860f75639084ad1b1200?per_page=1 HTTP/1.1" 200 2 2025-08-28 00:43:48,523 [ scc.repo] DEBUG - PR 168 stick 'Changes to nginx @maintenance handler' 2025-08-28 00:43:48,523 [ scc.repo] DEBUG ## Branches found: 2025-08-28 00:43:48,523 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-08-28 00:43:48,524 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 00:43:48,524 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:43:48,527 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-28 00:43:48,529 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-28 00:43:48,529 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-28 00:43:48,533 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-28 00:43:48,537 [ scc.git] DEBUG Already up to date. 2025-08-28 00:43:48,537 [ scc.git] DEBUG Calling 'git fetch origin pull/168/head' 2025-08-28 00:43:48,833 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-28 00:43:48,833 [ scc.git] DEBUG * branch refs/pull/168/head -> FETCH_HEAD 2025-08-28 00:43:48,838 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2025-08-28 00:43:49,218 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-28 00:43:49,218 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2025-08-28 00:43:49,223 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2025-08-28 00:43:49,569 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-28 00:43:49,569 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2025-08-28 00:43:49,574 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2025-08-28 00:43:49,852 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-28 00:43:49,852 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2025-08-28 00:43:49,857 [ scc.git] DEBUG Calling 'git fetch origin pull/596/head' 2025-08-28 00:43:50,145 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-28 00:43:50,145 [ scc.git] DEBUG * branch refs/pull/596/head -> FETCH_HEAD 2025-08-28 00:43:50,150 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head' 2025-08-28 00:43:50,681 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-28 00:43:50,681 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD 2025-08-28 00:43:50,686 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head' 2025-08-28 00:43:51,082 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-28 00:43:51,082 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD 2025-08-28 00:43:51,087 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head' 2025-08-28 00:43:51,637 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-28 00:43:51,637 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD 2025-08-28 00:43:51,642 [ scc.git] DEBUG Calling 'git fetch origin pull/613/head' 2025-08-28 00:43:51,991 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-28 00:43:51,991 [ scc.git] DEBUG * branch refs/pull/613/head -> FETCH_HEAD 2025-08-28 00:43:51,996 [ scc.git] DEBUG Calling 'git fetch origin pull/619/head' 2025-08-28 00:43:52,311 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-28 00:43:52,311 [ scc.git] DEBUG * branch refs/pull/619/head -> FETCH_HEAD 2025-08-28 00:43:52,315 [ scc.git] DEBUG Calling 'git fetch origin pull/628/head' 2025-08-28 00:43:52,814 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-28 00:43:52,814 [ scc.git] DEBUG * branch refs/pull/628/head -> FETCH_HEAD 2025-08-28 00:43:52,819 [ scc.git] DEBUG ## Unique users: [] 2025-08-28 00:43:52,819 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 00:43:52,819 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:43:52,821 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06b0073db19eeccb9698860f75639084ad1b1200' 2025-08-28 00:43:52,830 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:43:52,833 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 168 (Changes to nginx @maintenance handler) 06b0073db19eeccb9698860f75639084ad1b1200' 2025-08-28 00:43:52,854 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 00:43:52,858 [ scc.git] DEBUG omeroweb/templates/nginx-development.conf.template | 2 +- 2025-08-28 00:43:52,858 [ scc.git] DEBUG omeroweb/templates/nginx-location.conf.template | 3 ++- 2025-08-28 00:43:52,858 [ scc.git] DEBUG omeroweb/templates/nginx.conf.template | 2 +- 2025-08-28 00:43:52,858 [ scc.git] DEBUG test/unit/reference_templates/nginx-development-withoptions.conf | 2 +- 2025-08-28 00:43:52,858 [ scc.git] DEBUG test/unit/reference_templates/nginx-development.conf | 2 +- 2025-08-28 00:43:52,858 [ scc.git] DEBUG test/unit/reference_templates/nginx-location-withoptions.conf | 3 ++- 2025-08-28 00:43:52,858 [ scc.git] DEBUG test/unit/reference_templates/nginx-location.conf | 3 ++- 2025-08-28 00:43:52,858 [ scc.git] DEBUG test/unit/reference_templates/nginx-withoptions.conf | 2 +- 2025-08-28 00:43:52,858 [ scc.git] DEBUG test/unit/reference_templates/nginx.conf | 2 +- 2025-08-28 00:43:52,858 [ scc.git] DEBUG test/unit/test_web.py | 1 + 2025-08-28 00:43:52,858 [ scc.git] DEBUG 10 files changed, 13 insertions(+), 9 deletions(-) 2025-08-28 00:43:52,861 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:53,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 00:43:53,088 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-08-28 00:43:53,097 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:43:53,100 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-08-28 00:43:53,120 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-08-28 00:43:53,120 [ scc.git] DEBUG Auto-merging setup.py 2025-08-28 00:43:53,122 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 00:43:53,126 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2025-08-28 00:43:53,126 [ scc.git] DEBUG setup.py | 1 + 2025-08-28 00:43:53,126 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2025-08-28 00:43:53,340 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:53,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 00:43:53,588 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-08-28 00:43:53,598 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:43:53,600 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-08-28 00:43:53,624 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2025-08-28 00:43:53,624 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2025-08-28 00:43:53,625 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 00:43:53,630 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2025-08-28 00:43:53,630 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2025-08-28 00:43:53,630 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2025-08-28 00:43:53,840 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:54,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 00:43:54,050 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-08-28 00:43:54,060 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:43:54,062 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (linkify supports urls that include {}[] characters) 30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-08-28 00:43:54,084 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 00:43:54,088 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +- 2025-08-28 00:43:54,088 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-08-28 00:43:54,302 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:54,510 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 00:43:54,510 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-08-28 00:43:54,519 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:43:54,522 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Linkify can parse anchor tag) 3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-08-28 00:43:54,542 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 00:43:54,547 [ scc.git] DEBUG .../webclient/javascript/ome.webclient.actions.js | 26 ++++++++++++++++++++-- 2025-08-28 00:43:54,547 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2025-08-28 00:43:54,762 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:54,967 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 00:43:54,967 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539' 2025-08-28 00:43:54,977 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:43:54,979 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539' 2025-08-28 00:43:55,002 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 00:43:55,007 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 - 2025-08-28 00:43:55,007 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++-- 2025-08-28 00:43:55,007 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++- 2025-08-28 00:43:55,007 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +- 2025-08-28 00:43:55,007 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++- 2025-08-28 00:43:55,007 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++-- 2025-08-28 00:43:55,007 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++-- 2025-08-28 00:43:55,007 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++----- 2025-08-28 00:43:55,007 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 + 2025-08-28 00:43:55,007 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +- 2025-08-28 00:43:55,007 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++-- 2025-08-28 00:43:55,007 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-) 2025-08-28 00:43:55,219 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:55,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 00:43:55,529 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-08-28 00:43:55,539 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:43:55,541 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-08-28 00:43:55,568 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py 2025-08-28 00:43:55,569 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 00:43:55,576 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------ 2025-08-28 00:43:55,576 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +--- 2025-08-28 00:43:55,576 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 ----------------- 2025-08-28 00:43:55,576 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-) 2025-08-28 00:43:55,781 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:56,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 00:43:56,195 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-08-28 00:43:56,205 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:43:56,207 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Allow top_links to wrap if too many for space) 06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-08-28 00:43:56,230 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 00:43:56,234 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.body.css | 2 ++ 2025-08-28 00:43:56,234 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.header.css | 21 +++++++++++---------- 2025-08-28 00:43:56,234 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 10 deletions(-) 2025-08-28 00:43:56,447 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:56,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 00:43:56,656 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cca34cb278cac5fb8088df75cc4fe5f315810342' 2025-08-28 00:43:56,666 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:43:56,668 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 613 (externalInfo display) cca34cb278cac5fb8088df75cc4fe5f315810342' 2025-08-28 00:43:56,690 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 00:43:56,694 [ scc.git] DEBUG .../webclient/annotations/includes/toolbar.html | 20 ++++++++++++-- 2025-08-28 00:43:56,695 [ scc.git] DEBUG .../webclient/annotations/metadata_general.html | 31 +++++++++++++++------- 2025-08-28 00:43:56,695 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 2 ++ 2025-08-28 00:43:56,695 [ scc.git] DEBUG 3 files changed, 42 insertions(+), 11 deletions(-) 2025-08-28 00:43:56,908 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:57,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 00:43:57,135 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6dbfcebfee72e20f36a434fdc8850930d89acdac' 2025-08-28 00:43:57,145 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:43:57,148 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 619 (Permit subpackages as app plugins) 6dbfcebfee72e20f36a434fdc8850930d89acdac' 2025-08-28 00:43:57,169 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-08-28 00:43:57,171 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 00:43:57,175 [ scc.git] DEBUG omeroweb/settings.py | 9 ++++----- 2025-08-28 00:43:57,175 [ scc.git] DEBUG 1 file changed, 4 insertions(+), 5 deletions(-) 2025-08-28 00:43:57,387 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:57,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 00:43:57,677 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8c7989c9900270d7cf27523f2649bbb903c7a60' 2025-08-28 00:43:57,687 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:43:57,689 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 628 (Add protocol required since Django4) b8c7989c9900270d7cf27523f2649bbb903c7a60' 2025-08-28 00:43:57,711 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-08-28 00:43:57,712 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-28 00:43:57,717 [ scc.git] DEBUG omeroweb/settings.py | 4 ++-- 2025-08-28 00:43:57,717 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-) 2025-08-28 00:43:57,929 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:58,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 00:43:58,129 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-28 00:43:58,172 [ scc.git] DEBUG Get sha1 of %s 2025-08-28 00:43:58,172 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-28 00:43:58,175 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 00:43:58,216 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-28 00:43:58,225 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9124637a90> has no local changes 2025-08-28 00:43:58,225 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) Already up to date. Merged PRs: - PR 168 stick 'Changes to nginx @maintenance handler' - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 619 DavidStirling 'Permit subpackages as app plugins' - PR 628 jburel 'Add protocol required since Django4' Generated by OMERO-python-superbuild-push#504 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/504/)' 2025-08-28 00:43:58,234 [ scc.git] DEBUG [detached HEAD 5ee30e327] merge master -Dorg -Ssuccess-only 2025-08-28 00:43:58,234 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-28 00:43:58,234 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-28 00:43:58,284 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2025-08-28 00:43:58,381 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:58,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 00:43:58,797 [ scc.config] DEBUG Found submodule.omero-marshal.url 2025-08-28 00:43:59,042 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:59,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 00:43:59,277 [ scc.config] DEBUG Found submodule.omero-py.url 2025-08-28 00:43:59,521 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:43:59,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 00:43:59,918 [ scc.config] DEBUG Found submodule.omero-scripts.url 2025-08-28 00:44:00,163 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:44:00,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 00:44:00,543 [ scc.config] DEBUG Found submodule.omero-web.url 2025-08-28 00:44:00,788 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-28 00:44:00,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-28 00:44:00,986 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-28 00:44:01,014 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f9124758cd0> has local changes 2025-08-28 00:44:01,014 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Repository: ome/omero-py Excluded PRs: - PR 470 multimeric 'Faux import' (user: multimeric) - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 472 sbesson 'Remove PyOpenSSL injection via urllib3' Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) Already up to date. Merged PRs: - PR 168 stick 'Changes to nginx @maintenance handler' - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 619 DavidStirling 'Permit subpackages as app plugins' - PR 628 jburel 'Add protocol required since Django4' Generated by OMERO-python-superbuild-push#504 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/504/)' 2025-08-28 00:44:01,023 [ scc.git] DEBUG [detached HEAD 8ab4b53] merge master -Dorg -Ssuccess-only 2025-08-28 00:44:01,023 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2025-08-28 00:44:01,023 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-08-28 00:44:01,023 [ scc.merge] INFO Already up to date. 2025-08-28 00:44:01,023 [ scc.merge] INFO 2025-08-28 00:44:01,023 [ scc.merge] INFO 2025-08-28 00:44:01,023 [ scc.merge] INFO Repository: ome/omero-dropbox 2025-08-28 00:44:01,023 [ scc.merge] INFO Already up to date. 2025-08-28 00:44:01,023 [ scc.merge] INFO 2025-08-28 00:44:01,023 [ scc.merge] INFO Merged PRs: 2025-08-28 00:44:01,023 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-08-28 00:44:01,023 [ scc.merge] INFO 2025-08-28 00:44:01,023 [ scc.merge] INFO Repository: ome/omero-marshal 2025-08-28 00:44:01,023 [ scc.merge] INFO Excluded PRs: 2025-08-28 00:44:01,023 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) 2025-08-28 00:44:01,023 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2025-08-28 00:44:01,023 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2025-08-28 00:44:01,023 [ scc.merge] INFO Already up to date. 2025-08-28 00:44:01,023 [ scc.merge] INFO 2025-08-28 00:44:01,023 [ scc.merge] INFO Merged PRs: 2025-08-28 00:44:01,023 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2025-08-28 00:44:01,023 [ scc.merge] INFO 2025-08-28 00:44:01,024 [ scc.merge] INFO Repository: ome/omero-py 2025-08-28 00:44:01,024 [ scc.merge] INFO Excluded PRs: 2025-08-28 00:44:01,024 [ scc.merge] INFO - PR 470 multimeric 'Faux import' (user: multimeric) 2025-08-28 00:44:01,024 [ scc.merge] INFO - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) 2025-08-28 00:44:01,024 [ scc.merge] INFO - PR 450 multimeric 'Add model stubs' (user: multimeric) 2025-08-28 00:44:01,024 [ scc.merge] INFO - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) 2025-08-28 00:44:01,024 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2025-08-28 00:44:01,024 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) 2025-08-28 00:44:01,024 [ scc.merge] INFO Already up to date. 2025-08-28 00:44:01,024 [ scc.merge] INFO 2025-08-28 00:44:01,024 [ scc.merge] INFO Merged PRs: 2025-08-28 00:44:01,024 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2025-08-28 00:44:01,024 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2025-08-28 00:44:01,024 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2025-08-28 00:44:01,024 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method' 2025-08-28 00:44:01,024 [ scc.merge] INFO - PR 472 sbesson 'Remove PyOpenSSL injection via urllib3' 2025-08-28 00:44:01,024 [ scc.merge] INFO 2025-08-28 00:44:01,024 [ scc.merge] INFO Repository: ome/omero-scripts 2025-08-28 00:44:01,024 [ scc.merge] INFO Excluded PRs: 2025-08-28 00:44:01,024 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-08-28 00:44:01,024 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-08-28 00:44:01,024 [ scc.merge] INFO Already up to date. 2025-08-28 00:44:01,024 [ scc.merge] INFO 2025-08-28 00:44:01,024 [ scc.merge] INFO Merged PRs: 2025-08-28 00:44:01,024 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-08-28 00:44:01,024 [ scc.merge] INFO 2025-08-28 00:44:01,024 [ scc.merge] INFO Conflicting PRs (not included): 2025-08-28 00:44:01,024 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-08-28 00:44:01,024 [ scc.merge] INFO 2025-08-28 00:44:01,024 [ scc.merge] INFO Repository: ome/omero-web 2025-08-28 00:44:01,024 [ scc.merge] INFO Excluded PRs: 2025-08-28 00:44:01,024 [ scc.merge] INFO - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-08-28 00:44:01,024 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2025-08-28 00:44:01,024 [ scc.merge] INFO Already up to date. 2025-08-28 00:44:01,024 [ scc.merge] INFO 2025-08-28 00:44:01,024 [ scc.merge] INFO Merged PRs: 2025-08-28 00:44:01,024 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' 2025-08-28 00:44:01,024 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2025-08-28 00:44:01,024 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-08-28 00:44:01,025 [ scc.merge] INFO - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-08-28 00:44:01,025 [ scc.merge] INFO - PR 596 sukunis 'Linkify can parse anchor tag' 2025-08-28 00:44:01,025 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations' 2025-08-28 00:44:01,025 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf' 2025-08-28 00:44:01,025 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-08-28 00:44:01,025 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display' 2025-08-28 00:44:01,025 [ scc.merge] INFO - PR 619 DavidStirling 'Permit subpackages as app plugins' 2025-08-28 00:44:01,025 [ scc.merge] INFO - PR 628 jburel 'Add protocol required since Django4' 2025-08-28 00:44:01,025 [ scc.merge] INFO 2025-08-28 00:44:01,025 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-08-28 00:44:01,025 [ scc.git] DEBUG Calling 'git remote' 2025-08-28 00:44:01,027 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-08-28 00:44:01,027 [ scc.git] DEBUG Calling 'git remote' 2025-08-28 00:44:01,029 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-28 00:44:01,029 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-08-28 00:44:01,029 [ scc.git] DEBUG Calling 'git remote' 2025-08-28 00:44:01,032 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-28 00:44:01,032 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-08-28 00:44:01,032 [ scc.git] DEBUG Calling 'git remote' 2025-08-28 00:44:01,034 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-28 00:44:01,034 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-08-28 00:44:01,034 [ scc.git] DEBUG Calling 'git remote' 2025-08-28 00:44:01,037 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-28 00:44:01,037 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-08-28 00:44:01,037 [ scc.git] DEBUG Calling 'git remote' 2025-08-28 00:44:01,039 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from 01fa0c5 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from 6d44f66 nothing to commit, working tree clean Entering 'omero-py' HEAD detached from 70b6235a nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 573db34 nothing to commit, working tree clean Entering 'omero-web' HEAD detached from 2a7c4d2e3 nothing to commit, working tree clean HEAD detached from e505e49 nothing to commit, working tree clean 2025-08-28 00:44:37,838 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS