![[Jenkins]](/jenkins/static/9bac06d9/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 601 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision e505e4936e5c9bb70e5ff78e9177f491ec55c92d (refs/remotes/origin/master) Commit message: "Merge pull request #328 from ome/dependabot/submodules/omero-py-70b6235" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f e505e4936e5c9bb70e5ff78e9177f491ec55c92d # timeout=10 > git rev-list --no-walk e505e4936e5c9bb70e5ff78e9177f491ec55c92d # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 > git submodule update --init --recursive omero-marshal # timeout=10 > git submodule update --init --recursive omero-dropbox # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 533 [Pipeline] sh > git submodule update --init --recursive omero-scripts # timeout=10 + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-python-superbuild-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-25.2-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-25.2 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.7.0-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.15-py3-none-any.whl.metadata (25 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.5-py3-none-any.whl.metadata (4.9 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-45.0.6-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.14 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting pycparser (from cffi>=1.14->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (36 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2025.8.3-py3-none-any.whl.metadata (2.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.7.0-py3-none-any.whl (416 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached cryptography-45.0.6-cp311-abi3-manylinux_2_34_x86_64.whl (4.5 MB) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (467 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (762 kB) Using cached requests-2.32.5-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (150 kB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached certifi-2025.8.3-py3-none-any.whl (161 kB) Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Using cached ruamel.yaml-0.18.15-py3-none-any.whl (119 kB) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (739 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml, requests, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.7.0 PyYAML-6.0.2 certifi-2025.8.3 cffi-1.17.1 charset_normalizer-3.4.3 cryptography-45.0.6 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.5 ruamel.yaml-0.18.15 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-08-29 00:36:30,780 [ scc.config] DEBUG Found github.token 2025-08-29 00:36:30,782 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:30,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:36:31,233 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:31,413 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:36:31,665 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:31,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-08-29 00:36:31,859 [ scc.gh] DEBUG 4389 remaining from 5000 (Reset at 00:08 2025-08-29 00:36:31,859 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-29 00:36:31,862 [ scc.git] DEBUG Check current status 2025-08-29 00:36:31,862 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-29 00:36:31,865 [ scc.git] DEBUG e505e49 Merge pull request #328 from ome/dependabot/submodules/omero-py-70b6235 2025-08-29 00:36:31,865 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-29 00:36:31,909 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-08-29 00:36:31,913 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-08-29 00:36:31,918 [ scc.git] DEBUG 70b6235a7283f1729225c4c3c24f01dfe97ae12b omero-py (v5.21.0-5-g70b6235a) 2025-08-29 00:36:31,923 [ scc.git] DEBUG 573db340d5d1429fa17c7e486206948412a7c150 omero-scripts (v5.9.1-1-g573db34) 2025-08-29 00:36:31,927 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-08-29 00:36:31,930 [ scc.config] DEBUG Found remote.origin.url 2025-08-29 00:36:32,111 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:32,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-08-29 00:36:32,697 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:32,952 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-29 00:36:33,205 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:33,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-29 00:36:33,669 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:33,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-29 00:36:34,137 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:34,333 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-29 00:36:34,334 [ scc.git] DEBUG Resetting... 2025-08-29 00:36:34,334 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-08-29 00:36:34,339 [ scc.git] DEBUG HEAD is now at e505e49 Merge pull request #328 from ome/dependabot/submodules/omero-py-70b6235 2025-08-29 00:36:34,339 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-08-29 00:36:34,399 [ scc.git] DEBUG Check current status 2025-08-29 00:36:34,399 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-29 00:36:34,401 [ scc.git] DEBUG e505e49 Merge pull request #328 from ome/dependabot/submodules/omero-py-70b6235 2025-08-29 00:36:34,402 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-29 00:36:34,445 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-08-29 00:36:34,449 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-08-29 00:36:34,454 [ scc.git] DEBUG 70b6235a7283f1729225c4c3c24f01dfe97ae12b omero-py (v5.21.0-5-g70b6235a) 2025-08-29 00:36:34,459 [ scc.git] DEBUG 573db340d5d1429fa17c7e486206948412a7c150 omero-scripts (v5.9.1-1-g573db34) 2025-08-29 00:36:34,463 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-08-29 00:36:34,464 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-08-29 00:36:34,464 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-08-29 00:36:34,464 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-08-29 00:36:34,464 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-08-29 00:36:34,464 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-08-29 00:36:34,464 [ scc.repo] DEBUG ## PRs found: 2025-08-29 00:36:34,585 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:34,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2025-08-29 00:36:34,794 [ scc.repo] DEBUG ## Branches found: 2025-08-29 00:36:34,794 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:36:34,794 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:36:34,796 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-29 00:36:34,798 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-29 00:36:34,798 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-29 00:36:34,801 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-29 00:36:34,804 [ scc.git] DEBUG Already up to date. 2025-08-29 00:36:34,804 [ scc.git] DEBUG ## Unique users: [] 2025-08-29 00:36:34,804 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:36:34,804 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:36:34,806 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-29 00:36:34,849 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:36:34,849 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:36:34,851 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-29 00:36:34,887 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f594860ae10> has no local changes 2025-08-29 00:36:34,887 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Generated by OMERO-python-superbuild-push#505 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/505/)' 2025-08-29 00:36:34,913 [ scc.git] DEBUG [detached HEAD 011ab0f] merge master -Dorg -Snone 2025-08-29 00:36:34,913 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-08-29 00:36:34,913 [ scc.merge] INFO Already up to date. 2025-08-29 00:36:34,913 [ scc.merge] INFO 2025-08-29 00:36:34,913 [ scc.merge] INFO 2025-08-29 00:36:34,913 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-08-29 00:36:34,913 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-08-29 00:36:36,847 [ scc.config] DEBUG Found github.token 2025-08-29 00:36:36,848 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:37,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:36:37,304 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:37,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:36:37,751 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:37,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-08-29 00:36:37,937 [ scc.gh] DEBUG 4381 remaining from 5000 (Reset at 00:08 2025-08-29 00:36:37,937 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-29 00:36:37,940 [ scc.git] DEBUG Check current status 2025-08-29 00:36:37,940 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-29 00:36:37,942 [ scc.git] DEBUG 011ab0f merge master -Dorg -Snone 2025-08-29 00:36:37,943 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-29 00:36:37,986 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-08-29 00:36:37,990 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-08-29 00:36:37,995 [ scc.git] DEBUG 70b6235a7283f1729225c4c3c24f01dfe97ae12b omero-py (v5.21.0-5-g70b6235a) 2025-08-29 00:36:38,000 [ scc.git] DEBUG 573db340d5d1429fa17c7e486206948412a7c150 omero-scripts (v5.9.1-1-g573db34) 2025-08-29 00:36:38,005 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-08-29 00:36:38,008 [ scc.config] DEBUG Found remote.origin.url 2025-08-29 00:36:38,008 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-08-29 00:36:38,009 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-08-29 00:36:38,189 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:38,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-08-29 00:36:38,731 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:39,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-29 00:36:39,265 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:39,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-29 00:36:39,741 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:39,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-29 00:36:40,230 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:40,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-29 00:36:40,440 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:36:40,492 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-08-29 00:36:40,492 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-29 00:36:40,495 [ scc.git] DEBUG Check current status 2025-08-29 00:36:40,495 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-29 00:36:40,497 [ scc.git] DEBUG 01fa0c5 Merge pull request #24 from jburel/build 2025-08-29 00:36:40,498 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-29 00:36:40,540 [ scc.config] DEBUG Found remote.origin.url 2025-08-29 00:36:40,692 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:41,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2025-08-29 00:36:41,259 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:41,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-29 00:36:41,760 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:41,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-29 00:36:42,209 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:42,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-29 00:36:42,667 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:42,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-29 00:36:42,870 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:36:42,913 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-29 00:36:42,913 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-08-29 00:36:42,913 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-29 00:36:42,916 [ scc.git] DEBUG Check current status 2025-08-29 00:36:42,916 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-29 00:36:42,918 [ scc.git] DEBUG 6d44f66 Merge pull request #82 from jburel/build 2025-08-29 00:36:42,919 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-29 00:36:42,961 [ scc.config] DEBUG Found remote.origin.url 2025-08-29 00:36:43,121 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:43,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2025-08-29 00:36:43,718 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:43,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-29 00:36:44,227 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:44,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-29 00:36:44,694 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:44,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-29 00:36:45,170 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:45,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-29 00:36:45,372 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:36:45,415 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-29 00:36:45,416 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-08-29 00:36:45,416 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-29 00:36:45,418 [ scc.git] DEBUG Check current status 2025-08-29 00:36:45,418 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-29 00:36:45,421 [ scc.git] DEBUG 70b6235a Merge pull request #464 from dominikl/map_anno_wrapper 2025-08-29 00:36:45,421 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-29 00:36:45,464 [ scc.config] DEBUG Found remote.origin.url 2025-08-29 00:36:45,624 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:45,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2025-08-29 00:36:46,196 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:46,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-29 00:36:46,709 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:46,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-29 00:36:47,166 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:47,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-29 00:36:47,615 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:47,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-29 00:36:47,830 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:36:47,872 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-29 00:36:47,873 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-08-29 00:36:47,873 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-29 00:36:47,875 [ scc.git] DEBUG Check current status 2025-08-29 00:36:47,875 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-29 00:36:47,878 [ scc.git] DEBUG 573db34 Bump version: 5.9.1 → 5.9.2.dev0 2025-08-29 00:36:47,878 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-29 00:36:47,922 [ scc.config] DEBUG Found remote.origin.url 2025-08-29 00:36:47,922 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-08-29 00:36:48,081 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:48,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2025-08-29 00:36:48,757 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:49,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-29 00:36:49,277 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:49,480 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-29 00:36:49,732 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:49,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-29 00:36:50,206 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:50,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-29 00:36:50,399 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:36:50,441 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-29 00:36:50,442 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-08-29 00:36:50,442 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-08-29 00:36:50,444 [ scc.git] DEBUG Check current status 2025-08-29 00:36:50,444 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-29 00:36:50,447 [ scc.git] DEBUG 2a7c4d2e3 Bump version: 5.29.2 → 5.29.3.dev0 2025-08-29 00:36:50,448 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-29 00:36:50,492 [ scc.config] DEBUG Found remote.origin.url 2025-08-29 00:36:50,651 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:50,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2025-08-29 00:36:51,204 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:51,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-08-29 00:36:51,735 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:51,940 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-08-29 00:36:52,193 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:52,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-08-29 00:36:52,658 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:52,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-08-29 00:36:52,856 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:36:52,899 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-29 00:36:52,899 [ scc.git] DEBUG Resetting... 2025-08-29 00:36:52,899 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-08-29 00:36:52,903 [ scc.git] DEBUG HEAD is now at 011ab0f merge master -Dorg -Snone 2025-08-29 00:36:52,903 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-08-29 00:36:52,962 [ scc.git] DEBUG Check current status 2025-08-29 00:36:52,962 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-08-29 00:36:52,965 [ scc.git] DEBUG 011ab0f merge master -Dorg -Snone 2025-08-29 00:36:52,965 [ scc.git] DEBUG Calling 'git submodule status' 2025-08-29 00:36:53,007 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-08-29 00:36:53,010 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-08-29 00:36:53,015 [ scc.git] DEBUG 70b6235a7283f1729225c4c3c24f01dfe97ae12b omero-py (v5.21.0-5-g70b6235a) 2025-08-29 00:36:53,020 [ scc.git] DEBUG 573db340d5d1429fa17c7e486206948412a7c150 omero-scripts (v5.9.1-1-g573db34) 2025-08-29 00:36:53,024 [ scc.git] DEBUG 2a7c4d2e3a98d90b3345039bf70dcc0d96b36135 omero-web (v5.29.2-1-g2a7c4d2e3) 2025-08-29 00:36:53,025 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-08-29 00:36:53,025 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-08-29 00:36:53,025 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-08-29 00:36:53,025 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-08-29 00:36:53,025 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-08-29 00:36:53,025 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-08-29 00:36:53,026 [ scc.repo] DEBUG ## PRs found: 2025-08-29 00:36:53,108 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:53,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2025-08-29 00:36:53,350 [ scc.repo] DEBUG ## Branches found: 2025-08-29 00:36:53,350 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:36:53,350 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:36:53,353 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-29 00:36:53,355 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-29 00:36:53,355 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-29 00:36:53,358 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-29 00:36:53,361 [ scc.git] DEBUG Already up to date. 2025-08-29 00:36:53,361 [ scc.git] DEBUG ## Unique users: [] 2025-08-29 00:36:53,361 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:36:53,361 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:36:53,363 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-29 00:36:53,405 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:36:53,405 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:36:53,407 [ scc.repo] DEBUG ## PRs found: 2025-08-29 00:36:53,602 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:53,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2025-08-29 00:36:54,189 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:54,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2025-08-29 00:36:54,714 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:54,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2025-08-29 00:36:55,197 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:55,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-08-29 00:36:55,761 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:56,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:36:56,267 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:56,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-08-29 00:36:56,840 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:57,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:36:57,085 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-08-29 00:36:57,085 [ scc.repo] DEBUG ## Branches found: 2025-08-29 00:36:57,085 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-08-29 00:36:57,085 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:36:57,085 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:36:57,088 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-29 00:36:57,091 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-29 00:36:57,091 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-29 00:36:57,094 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-29 00:36:57,097 [ scc.git] DEBUG Already up to date. 2025-08-29 00:36:57,097 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2025-08-29 00:36:57,383 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2025-08-29 00:36:57,383 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2025-08-29 00:36:57,387 [ scc.git] DEBUG ## Unique users: [] 2025-08-29 00:36:57,387 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:36:57,387 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:36:57,390 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-08-29 00:36:57,393 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:36:57,396 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-08-29 00:36:57,409 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2025-08-29 00:36:57,409 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2025-08-29 00:36:57,409 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2025-08-29 00:36:57,410 [ scc.git] DEBUG Auto-merging src/fsLists.py 2025-08-29 00:36:57,410 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2025-08-29 00:36:57,410 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2025-08-29 00:36:57,410 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2025-08-29 00:36:57,410 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2025-08-29 00:36:57,410 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2025-08-29 00:36:57,411 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:36:57,415 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2025-08-29 00:36:57,415 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2025-08-29 00:36:57,415 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2025-08-29 00:36:57,415 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2025-08-29 00:36:57,415 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2025-08-29 00:36:57,415 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2025-08-29 00:36:57,415 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2025-08-29 00:36:57,415 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2025-08-29 00:36:57,415 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2025-08-29 00:36:57,415 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2025-08-29 00:36:57,417 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:57,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:36:57,617 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-29 00:36:57,660 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:36:57,660 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:36:57,662 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:36:57,704 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-29 00:36:57,708 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f47a7a60290> has no local changes 2025-08-29 00:36:57,708 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Generated by OMERO-python-superbuild-push#505 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/505/)' 2025-08-29 00:36:57,716 [ scc.git] DEBUG [detached HEAD 064fc0c] merge master -Dorg -Ssuccess-only 2025-08-29 00:36:57,716 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-29 00:36:57,716 [ scc.repo] DEBUG ## PRs found: 2025-08-29 00:36:57,869 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:58,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2025-08-29 00:36:58,476 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:58,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None 2025-08-29 00:36:58,998 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:59,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None 2025-08-29 00:36:59,493 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:36:59,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2025-08-29 00:37:00,000 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:00,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2025-08-29 00:37:00,507 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:00,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-08-29 00:37:01,072 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:01,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:37:01,600 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:01,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-08-29 00:37:02,211 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:02,439 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:37:02,439 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2025-08-29 00:37:02,691 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:02,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2025-08-29 00:37:03,205 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:03,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2025-08-29 00:37:03,692 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:03,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2025-08-29 00:37:04,221 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:04,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2025-08-29 00:37:04,476 [ scc.repo] DEBUG ## Branches found: 2025-08-29 00:37:04,476 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-08-29 00:37:04,476 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:37:04,477 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:37:04,480 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-29 00:37:04,482 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-29 00:37:04,482 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-29 00:37:04,485 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-29 00:37:04,488 [ scc.git] DEBUG Already up to date. 2025-08-29 00:37:04,488 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2025-08-29 00:37:04,772 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2025-08-29 00:37:04,772 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2025-08-29 00:37:04,777 [ scc.git] DEBUG ## Unique users: [] 2025-08-29 00:37:04,777 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:37:04,777 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:37:04,779 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-08-29 00:37:04,783 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:37:04,786 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-08-29 00:37:04,795 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2025-08-29 00:37:04,796 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:37:04,800 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2025-08-29 00:37:04,800 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2025-08-29 00:37:04,800 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2025-08-29 00:37:04,802 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:04,988 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:37:04,988 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-29 00:37:05,032 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:37:05,032 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:37:05,034 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:37:05,075 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-29 00:37:05,080 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f47a7aec110> has no local changes 2025-08-29 00:37:05,080 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Generated by OMERO-python-superbuild-push#505 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/505/)' 2025-08-29 00:37:05,086 [ scc.git] DEBUG [detached HEAD 615cc28] merge master -Dorg -Ssuccess-only 2025-08-29 00:37:05,086 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-29 00:37:05,087 [ scc.repo] DEBUG ## PRs found: 2025-08-29 00:37:05,240 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:05,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2025-08-29 00:37:05,966 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:06,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/472 HTTP/1.1" 200 None 2025-08-29 00:37:06,493 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:06,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/472/comments HTTP/1.1" 200 None 2025-08-29 00:37:06,980 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:07,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fbcef67768f4e37313bc42a18b5fb078964fcf64 HTTP/1.1" 200 None 2025-08-29 00:37:07,533 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:07,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fbcef67768f4e37313bc42a18b5fb078964fcf64/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:37:08,077 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:08,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fbcef67768f4e37313bc42a18b5fb078964fcf64/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:37:08,611 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:08,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fbcef67768f4e37313bc42a18b5fb078964fcf64 HTTP/1.1" 200 None 2025-08-29 00:37:09,183 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:09,388 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/fbcef67768f4e37313bc42a18b5fb078964fcf64?per_page=1 HTTP/1.1" 200 None 2025-08-29 00:37:09,641 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:09,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fbcef67768f4e37313bc42a18b5fb078964fcf64 HTTP/1.1" 200 None 2025-08-29 00:37:10,122 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:10,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/fbcef67768f4e37313bc42a18b5fb078964fcf64/status HTTP/1.1" 200 None 2025-08-29 00:37:10,363 [ scc.repo] DEBUG - PR 472 sbesson 'Remove PyOpenSSL injection via urllib3' 2025-08-29 00:37:10,615 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:10,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470 HTTP/1.1" 200 None 2025-08-29 00:37:11,116 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:11,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/470/comments HTTP/1.1" 200 None 2025-08-29 00:37:11,645 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:11,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459 HTTP/1.1" 200 None 2025-08-29 00:37:12,162 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:12,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450 HTTP/1.1" 200 None 2025-08-29 00:37:12,680 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:12,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450/comments HTTP/1.1" 200 None 2025-08-29 00:37:13,200 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:13,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443 HTTP/1.1" 200 None 2025-08-29 00:37:13,726 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:13,987 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443/comments HTTP/1.1" 200 None 2025-08-29 00:37:13,988 [ scc.repo] DEBUG # ... Exclude label: exclude 2025-08-29 00:37:14,239 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:14,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None 2025-08-29 00:37:14,735 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:14,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None 2025-08-29 00:37:15,233 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:15,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-08-29 00:37:15,802 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:16,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:37:16,265 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:16,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-08-29 00:37:16,767 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:16,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:37:16,984 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method' 2025-08-29 00:37:17,236 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:17,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2025-08-29 00:37:17,754 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:18,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2025-08-29 00:37:18,275 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:18,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2025-08-29 00:37:18,819 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:19,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:37:19,362 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:19,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:37:19,907 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:20,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2025-08-29 00:37:20,419 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:20,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None 2025-08-29 00:37:20,909 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:21,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-08-29 00:37:21,447 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:21,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:37:21,959 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:22,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-08-29 00:37:22,459 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:22,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:37:22,678 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2025-08-29 00:37:22,929 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:23,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2025-08-29 00:37:23,443 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:23,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2025-08-29 00:37:23,934 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:24,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-08-29 00:37:24,482 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:24,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:37:24,986 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:25,273 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-08-29 00:37:25,525 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:25,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:37:25,738 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2025-08-29 00:37:25,990 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:26,259 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2025-08-29 00:37:26,511 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:26,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2025-08-29 00:37:27,011 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:27,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2025-08-29 00:37:27,547 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:27,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2025-08-29 00:37:28,050 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:28,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-08-29 00:37:28,620 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:28,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:37:29,150 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:29,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-08-29 00:37:29,716 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:29,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:37:29,945 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2025-08-29 00:37:29,946 [ scc.repo] DEBUG ## Branches found: 2025-08-29 00:37:29,946 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-08-29 00:37:29,946 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:37:29,947 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:37:29,949 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-29 00:37:29,952 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-29 00:37:29,952 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-29 00:37:29,955 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-29 00:37:29,959 [ scc.git] DEBUG Already up to date. 2025-08-29 00:37:29,959 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2025-08-29 00:37:30,258 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-08-29 00:37:30,258 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2025-08-29 00:37:30,263 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2025-08-29 00:37:30,568 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-08-29 00:37:30,568 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2025-08-29 00:37:30,572 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2025-08-29 00:37:30,869 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-08-29 00:37:30,869 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2025-08-29 00:37:30,874 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2025-08-29 00:37:31,161 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-08-29 00:37:31,161 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2025-08-29 00:37:31,165 [ scc.git] DEBUG Calling 'git fetch origin pull/472/head' 2025-08-29 00:37:31,457 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-08-29 00:37:31,458 [ scc.git] DEBUG * branch refs/pull/472/head -> FETCH_HEAD 2025-08-29 00:37:31,462 [ scc.git] DEBUG ## Unique users: [] 2025-08-29 00:37:31,462 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:37:31,462 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:37:31,464 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-08-29 00:37:31,477 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:37:31,480 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-08-29 00:37:31,504 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2025-08-29 00:37:31,504 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2025-08-29 00:37:31,505 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:37:31,510 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2025-08-29 00:37:31,510 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2025-08-29 00:37:31,510 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2025-08-29 00:37:31,513 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:31,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:37:31,791 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-08-29 00:37:31,804 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:37:31,806 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-08-29 00:37:31,828 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:37:31,831 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2025-08-29 00:37:31,831 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2025-08-29 00:37:31,831 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2025-08-29 00:37:31,831 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2025-08-29 00:37:31,831 [ scc.git] DEBUG create mode 100644 connect.py 2025-08-29 00:37:32,043 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:32,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:37:32,250 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2025-08-29 00:37:32,264 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:37:32,266 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2025-08-29 00:37:32,289 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2025-08-29 00:37:32,291 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:37:32,295 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2025-08-29 00:37:32,295 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2025-08-29 00:37:32,502 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:32,704 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:37:32,705 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-08-29 00:37:32,718 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:37:32,721 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-08-29 00:37:32,755 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-08-29 00:37:32,756 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:37:32,763 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------ 2025-08-29 00:37:32,763 [ scc.git] DEBUG 1 file changed, 36 deletions(-) 2025-08-29 00:37:32,957 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:33,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:37:33,161 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fbcef67768f4e37313bc42a18b5fb078964fcf64' 2025-08-29 00:37:33,175 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:37:33,177 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 472 (Remove PyOpenSSL injection via urllib3) fbcef67768f4e37313bc42a18b5fb078964fcf64' 2025-08-29 00:37:33,201 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:37:33,204 [ scc.git] DEBUG setup.py | 1 - 2025-08-29 00:37:33,204 [ scc.git] DEBUG src/omero/util/upgrade_check.py | 7 ------- 2025-08-29 00:37:33,204 [ scc.git] DEBUG 2 files changed, 8 deletions(-) 2025-08-29 00:37:33,413 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:33,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:37:33,597 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-29 00:37:33,640 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:37:33,640 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:37:33,642 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:37:33,684 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-29 00:37:33,689 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f47a7b3db90> has no local changes 2025-08-29 00:37:33,689 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 470 multimeric 'Faux import' (user: multimeric) - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 472 sbesson 'Remove PyOpenSSL injection via urllib3' Generated by OMERO-python-superbuild-push#505 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/505/)' 2025-08-29 00:37:33,697 [ scc.git] DEBUG [detached HEAD 092f778f] merge master -Dorg -Ssuccess-only 2025-08-29 00:37:33,698 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-29 00:37:33,698 [ scc.git] INFO Overriding base-branch from master to develop 2025-08-29 00:37:33,698 [ scc.repo] DEBUG ## PRs found: 2025-08-29 00:37:33,849 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:34,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-08-29 00:37:34,492 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:34,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-08-29 00:37:35,015 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:35,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-08-29 00:37:35,519 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:35,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-08-29 00:37:36,026 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:36,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:37:36,531 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:36,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:37:37,048 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:37,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-08-29 00:37:37,584 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:37,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:37:37,795 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-08-29 00:37:38,046 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:38,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-08-29 00:37:38,562 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:38,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-08-29 00:37:39,066 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:39,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-08-29 00:37:39,646 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:39,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:37:40,125 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:40,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-08-29 00:37:40,608 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:40,830 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:37:40,830 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-08-29 00:37:41,082 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:41,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-08-29 00:37:41,664 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:41,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-08-29 00:37:42,201 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:42,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-08-29 00:37:42,742 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:43,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-08-29 00:37:43,062 [ scc.repo] DEBUG ## Branches found: 2025-08-29 00:37:43,063 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-08-29 00:37:43,063 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:37:43,063 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:37:43,066 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-08-29 00:37:43,069 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-29 00:37:43,069 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-08-29 00:37:43,072 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-08-29 00:37:43,075 [ scc.git] DEBUG Already up to date. 2025-08-29 00:37:43,075 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-08-29 00:37:43,359 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-08-29 00:37:43,360 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-08-29 00:37:43,364 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-08-29 00:37:43,661 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-08-29 00:37:43,661 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-08-29 00:37:43,665 [ scc.git] DEBUG ## Unique users: [] 2025-08-29 00:37:43,665 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:37:43,665 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:37:43,668 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-08-29 00:37:43,673 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:37:43,675 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-08-29 00:37:43,686 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-08-29 00:37:43,686 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-08-29 00:37:43,687 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-08-29 00:37:43,689 [ scc.git] DEBUG Calling 'git reset --hard 573db340d5d1429fa17c7e486206948412a7c150' 2025-08-29 00:37:43,693 [ scc.git] DEBUG HEAD is now at 573db34 Bump version: 5.9.1 → 5.9.2.dev0 2025-08-29 00:37:43,696 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:43,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:37:43,915 [ scc.git] DEBUG Calling 'git merge-base 573db340d5d1429fa17c7e486206948412a7c150 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-08-29 00:37:43,921 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..573db340d5d1429fa17c7e486206948412a7c150' 2025-08-29 00:37:43,925 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#505](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/505/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/505/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-08-29 00:37:43,927 [ scc.config] DEBUG Found github.token 2025-08-29 00:37:43,927 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-08-29 00:37:43,927 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-08-29 00:37:43,932 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:37:43,934 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-08-29 00:37:43,944 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:37:43,947 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-08-29 00:37:43,947 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-08-29 00:37:44,167 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:44,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:37:44,372 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-29 00:37:44,414 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:37:44,414 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:37:44,416 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:37:44,457 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-29 00:37:44,461 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f47a7b18510> has no local changes 2025-08-29 00:37:44,461 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#505 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/505/)' 2025-08-29 00:37:44,468 [ scc.git] DEBUG [detached HEAD fa22c4f] merge master -Dorg -Ssuccess-only 2025-08-29 00:37:44,469 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-29 00:37:44,469 [ scc.repo] DEBUG ## PRs found: 2025-08-29 00:37:44,624 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:45,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2025-08-29 00:37:45,296 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:45,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/629 HTTP/1.1" 200 None 2025-08-29 00:37:45,851 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:46,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/628 HTTP/1.1" 200 None 2025-08-29 00:37:46,352 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:46,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None 2025-08-29 00:37:46,915 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:47,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:37:47,441 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:47,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:37:47,967 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:48,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None 2025-08-29 00:37:48,444 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:48,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/b8c7989c9900270d7cf27523f2649bbb903c7a60?per_page=1 HTTP/1.1" 200 None 2025-08-29 00:37:48,907 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:49,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60 HTTP/1.1" 200 None 2025-08-29 00:37:49,401 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:49,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b8c7989c9900270d7cf27523f2649bbb903c7a60/status HTTP/1.1" 200 None 2025-08-29 00:37:49,647 [ scc.repo] DEBUG - PR 628 jburel 'Add protocol required since Django4' 2025-08-29 00:37:49,898 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:50,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/619 HTTP/1.1" 200 None 2025-08-29 00:37:50,429 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:50,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-08-29 00:37:51,020 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:51,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:37:51,508 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:51,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:37:52,050 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:52,362 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-08-29 00:37:52,614 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:52,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/6dbfcebfee72e20f36a434fdc8850930d89acdac?per_page=1 HTTP/1.1" 200 None 2025-08-29 00:37:53,085 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:53,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac HTTP/1.1" 200 None 2025-08-29 00:37:53,588 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:53,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/6dbfcebfee72e20f36a434fdc8850930d89acdac/status HTTP/1.1" 200 None 2025-08-29 00:37:53,835 [ scc.repo] DEBUG - PR 619 DavidStirling 'Permit subpackages as app plugins' 2025-08-29 00:37:54,087 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:54,332 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613 HTTP/1.1" 200 None 2025-08-29 00:37:54,585 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:54,825 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613/comments HTTP/1.1" 200 None 2025-08-29 00:37:55,078 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:55,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None 2025-08-29 00:37:55,646 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:55,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:37:56,183 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:56,470 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:37:56,723 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:56,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None 2025-08-29 00:37:57,252 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:57,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/cca34cb278cac5fb8088df75cc4fe5f315810342?per_page=1 HTTP/1.1" 200 None 2025-08-29 00:37:57,738 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:57,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342 HTTP/1.1" 200 None 2025-08-29 00:37:58,217 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:58,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/cca34cb278cac5fb8088df75cc4fe5f315810342/status HTTP/1.1" 200 None 2025-08-29 00:37:58,463 [ scc.repo] DEBUG - PR 613 will-moore 'externalInfo display' 2025-08-29 00:37:58,715 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:59,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612 HTTP/1.1" 200 None 2025-08-29 00:37:59,278 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:37:59,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612/comments HTTP/1.1" 200 None 2025-08-29 00:37:59,800 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:00,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-08-29 00:38:00,341 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:00,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:38:00,843 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:01,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:38:01,367 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:01,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-08-29 00:38:01,913 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:02,178 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06446bf912b361c22e46c5a0678b3146b91e7e26?per_page=1 HTTP/1.1" 200 None 2025-08-29 00:38:02,430 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:02,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-08-29 00:38:02,908 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:03,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/status HTTP/1.1" 200 None 2025-08-29 00:38:03,137 [ scc.repo] DEBUG - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-08-29 00:38:03,389 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:03,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None 2025-08-29 00:38:03,905 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:04,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None 2025-08-29 00:38:04,393 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:04,683 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-08-29 00:38:04,935 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:05,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:38:05,447 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:05,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:38:05,980 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:06,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-08-29 00:38:06,531 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:06,788 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None 2025-08-29 00:38:07,040 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:07,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-08-29 00:38:07,548 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:07,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None 2025-08-29 00:38:07,798 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf' 2025-08-29 00:38:08,050 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:08,300 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None 2025-08-29 00:38:08,552 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:08,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-08-29 00:38:09,084 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:09,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:38:09,648 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:09,947 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:38:10,200 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:10,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-08-29 00:38:10,777 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:11,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 None 2025-08-29 00:38:11,300 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:11,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-08-29 00:38:11,773 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:11,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/status HTTP/1.1" 200 None 2025-08-29 00:38:11,998 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations' 2025-08-29 00:38:12,249 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:12,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596 HTTP/1.1" 200 None 2025-08-29 00:38:12,810 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:13,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596/comments HTTP/1.1" 200 None 2025-08-29 00:38:13,310 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:13,597 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-08-29 00:38:13,849 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:14,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:38:14,389 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:14,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:38:14,952 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:15,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-08-29 00:38:15,510 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:15,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/3aae48f586d7b412538a45b34ddc471a26a286e8?per_page=1 HTTP/1.1" 200 None 2025-08-29 00:38:16,009 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:16,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-08-29 00:38:16,479 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:16,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/status HTTP/1.1" 200 None 2025-08-29 00:38:16,707 [ scc.repo] DEBUG - PR 596 sukunis 'Linkify can parse anchor tag' 2025-08-29 00:38:16,959 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:17,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595 HTTP/1.1" 200 None 2025-08-29 00:38:17,483 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:17,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595/comments HTTP/1.1" 200 None 2025-08-29 00:38:18,001 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:18,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-08-29 00:38:18,596 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:18,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:38:19,139 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:19,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-08-29 00:38:19,700 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:19,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-08-29 00:38:20,181 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:20,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/30278b64bb39134a3f1101b600d4a82256e6eaeb?per_page=1 HTTP/1.1" 200 None 2025-08-29 00:38:20,655 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:20,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-08-29 00:38:21,153 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:21,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/status HTTP/1.1" 200 None 2025-08-29 00:38:21,390 [ scc.repo] DEBUG - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-08-29 00:38:21,641 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:21,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2025-08-29 00:38:22,137 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:22,385 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None 2025-08-29 00:38:22,637 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:22,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2025-08-29 00:38:23,179 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:23,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2025-08-29 00:38:23,659 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:23,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-08-29 00:38:24,248 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:24,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:38:24,754 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:24,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-08-29 00:38:25,224 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:25,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:38:25,423 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-08-29 00:38:25,674 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:25,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2025-08-29 00:38:26,182 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:26,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2025-08-29 00:38:26,687 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:27,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-08-29 00:38:27,252 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:27,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:38:27,772 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:28,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-08-29 00:38:28,309 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:28,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:38:28,513 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2025-08-29 00:38:28,765 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:29,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2025-08-29 00:38:29,317 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:29,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2025-08-29 00:38:29,818 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:30,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2025-08-29 00:38:30,446 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:30,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-08-29 00:38:30,947 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:31,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2025-08-29 00:38:31,471 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:31,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06b0073db19eeccb9698860f75639084ad1b1200?per_page=1 HTTP/1.1" 200 2 2025-08-29 00:38:31,678 [ scc.repo] DEBUG - PR 168 stick 'Changes to nginx @maintenance handler' 2025-08-29 00:38:31,679 [ scc.repo] DEBUG ## Branches found: 2025-08-29 00:38:31,679 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-08-29 00:38:31,679 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:38:31,679 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:38:31,682 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-08-29 00:38:31,685 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-08-29 00:38:31,685 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-08-29 00:38:31,689 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-08-29 00:38:31,692 [ scc.git] DEBUG Already up to date. 2025-08-29 00:38:31,692 [ scc.git] DEBUG Calling 'git fetch origin pull/168/head' 2025-08-29 00:38:31,989 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-29 00:38:31,989 [ scc.git] DEBUG * branch refs/pull/168/head -> FETCH_HEAD 2025-08-29 00:38:31,993 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2025-08-29 00:38:32,291 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-29 00:38:32,291 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2025-08-29 00:38:32,296 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2025-08-29 00:38:32,582 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-29 00:38:32,582 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2025-08-29 00:38:32,586 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2025-08-29 00:38:32,888 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-29 00:38:32,888 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2025-08-29 00:38:32,894 [ scc.git] DEBUG Calling 'git fetch origin pull/596/head' 2025-08-29 00:38:33,196 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-29 00:38:33,196 [ scc.git] DEBUG * branch refs/pull/596/head -> FETCH_HEAD 2025-08-29 00:38:33,201 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head' 2025-08-29 00:38:33,490 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-29 00:38:33,490 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD 2025-08-29 00:38:33,495 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head' 2025-08-29 00:38:33,773 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-29 00:38:33,773 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD 2025-08-29 00:38:33,778 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head' 2025-08-29 00:38:34,063 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-29 00:38:34,064 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD 2025-08-29 00:38:34,068 [ scc.git] DEBUG Calling 'git fetch origin pull/613/head' 2025-08-29 00:38:34,358 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-29 00:38:34,358 [ scc.git] DEBUG * branch refs/pull/613/head -> FETCH_HEAD 2025-08-29 00:38:34,363 [ scc.git] DEBUG Calling 'git fetch origin pull/619/head' 2025-08-29 00:38:34,649 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-29 00:38:34,649 [ scc.git] DEBUG * branch refs/pull/619/head -> FETCH_HEAD 2025-08-29 00:38:34,653 [ scc.git] DEBUG Calling 'git fetch origin pull/628/head' 2025-08-29 00:38:34,944 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-08-29 00:38:34,944 [ scc.git] DEBUG * branch refs/pull/628/head -> FETCH_HEAD 2025-08-29 00:38:34,949 [ scc.git] DEBUG ## Unique users: [] 2025-08-29 00:38:34,949 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:38:34,949 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:38:34,952 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06b0073db19eeccb9698860f75639084ad1b1200' 2025-08-29 00:38:34,960 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:38:34,963 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 168 (Changes to nginx @maintenance handler) 06b0073db19eeccb9698860f75639084ad1b1200' 2025-08-29 00:38:34,984 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:38:34,988 [ scc.git] DEBUG omeroweb/templates/nginx-development.conf.template | 2 +- 2025-08-29 00:38:34,988 [ scc.git] DEBUG omeroweb/templates/nginx-location.conf.template | 3 ++- 2025-08-29 00:38:34,988 [ scc.git] DEBUG omeroweb/templates/nginx.conf.template | 2 +- 2025-08-29 00:38:34,988 [ scc.git] DEBUG test/unit/reference_templates/nginx-development-withoptions.conf | 2 +- 2025-08-29 00:38:34,988 [ scc.git] DEBUG test/unit/reference_templates/nginx-development.conf | 2 +- 2025-08-29 00:38:34,988 [ scc.git] DEBUG test/unit/reference_templates/nginx-location-withoptions.conf | 3 ++- 2025-08-29 00:38:34,988 [ scc.git] DEBUG test/unit/reference_templates/nginx-location.conf | 3 ++- 2025-08-29 00:38:34,988 [ scc.git] DEBUG test/unit/reference_templates/nginx-withoptions.conf | 2 +- 2025-08-29 00:38:34,988 [ scc.git] DEBUG test/unit/reference_templates/nginx.conf | 2 +- 2025-08-29 00:38:34,988 [ scc.git] DEBUG test/unit/test_web.py | 1 + 2025-08-29 00:38:34,989 [ scc.git] DEBUG 10 files changed, 13 insertions(+), 9 deletions(-) 2025-08-29 00:38:34,991 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:35,186 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:38:35,187 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-08-29 00:38:35,196 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:38:35,198 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-08-29 00:38:35,219 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-08-29 00:38:35,219 [ scc.git] DEBUG Auto-merging setup.py 2025-08-29 00:38:35,221 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:38:35,225 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2025-08-29 00:38:35,225 [ scc.git] DEBUG setup.py | 1 + 2025-08-29 00:38:35,225 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2025-08-29 00:38:35,439 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:35,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:38:35,640 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-08-29 00:38:35,649 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:38:35,652 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-08-29 00:38:35,676 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2025-08-29 00:38:35,676 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2025-08-29 00:38:35,677 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:38:35,682 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2025-08-29 00:38:35,682 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2025-08-29 00:38:35,682 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2025-08-29 00:38:35,892 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:36,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:38:36,085 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-08-29 00:38:36,094 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:38:36,097 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (linkify supports urls that include {}[] characters) 30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-08-29 00:38:36,118 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:38:36,122 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +- 2025-08-29 00:38:36,122 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-08-29 00:38:36,337 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:36,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:38:36,535 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-08-29 00:38:36,544 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:38:36,546 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Linkify can parse anchor tag) 3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-08-29 00:38:36,568 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:38:36,572 [ scc.git] DEBUG .../webclient/javascript/ome.webclient.actions.js | 26 ++++++++++++++++++++-- 2025-08-29 00:38:36,572 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2025-08-29 00:38:36,787 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:36,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:38:36,999 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539' 2025-08-29 00:38:37,009 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:38:37,011 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539' 2025-08-29 00:38:37,034 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:38:37,039 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 - 2025-08-29 00:38:37,039 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++-- 2025-08-29 00:38:37,039 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++- 2025-08-29 00:38:37,039 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +- 2025-08-29 00:38:37,039 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++- 2025-08-29 00:38:37,039 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++-- 2025-08-29 00:38:37,039 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++-- 2025-08-29 00:38:37,039 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++----- 2025-08-29 00:38:37,039 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 + 2025-08-29 00:38:37,040 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +- 2025-08-29 00:38:37,040 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++-- 2025-08-29 00:38:37,040 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-) 2025-08-29 00:38:37,251 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:37,449 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:38:37,450 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-08-29 00:38:37,460 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:38:37,462 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-08-29 00:38:37,489 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py 2025-08-29 00:38:37,491 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:38:37,498 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------ 2025-08-29 00:38:37,498 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +--- 2025-08-29 00:38:37,498 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 ----------------- 2025-08-29 00:38:37,498 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-) 2025-08-29 00:38:37,702 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:37,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:38:37,898 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-08-29 00:38:37,908 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:38:37,910 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Allow top_links to wrap if too many for space) 06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-08-29 00:38:37,935 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:38:37,939 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.body.css | 2 ++ 2025-08-29 00:38:37,939 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.header.css | 21 +++++++++++---------- 2025-08-29 00:38:37,939 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 10 deletions(-) 2025-08-29 00:38:38,150 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:38,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:38:38,351 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cca34cb278cac5fb8088df75cc4fe5f315810342' 2025-08-29 00:38:38,361 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:38:38,363 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 613 (externalInfo display) cca34cb278cac5fb8088df75cc4fe5f315810342' 2025-08-29 00:38:38,386 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:38:38,391 [ scc.git] DEBUG .../webclient/annotations/includes/toolbar.html | 20 ++++++++++++-- 2025-08-29 00:38:38,391 [ scc.git] DEBUG .../webclient/annotations/metadata_general.html | 31 +++++++++++++++------- 2025-08-29 00:38:38,391 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 2 ++ 2025-08-29 00:38:38,391 [ scc.git] DEBUG 3 files changed, 42 insertions(+), 11 deletions(-) 2025-08-29 00:38:38,603 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:38,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:38:38,792 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6dbfcebfee72e20f36a434fdc8850930d89acdac' 2025-08-29 00:38:38,802 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:38:38,804 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 619 (Permit subpackages as app plugins) 6dbfcebfee72e20f36a434fdc8850930d89acdac' 2025-08-29 00:38:38,826 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-08-29 00:38:38,828 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:38:38,832 [ scc.git] DEBUG omeroweb/settings.py | 9 ++++----- 2025-08-29 00:38:38,832 [ scc.git] DEBUG 1 file changed, 4 insertions(+), 5 deletions(-) 2025-08-29 00:38:39,044 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:39,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:38:39,225 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b8c7989c9900270d7cf27523f2649bbb903c7a60' 2025-08-29 00:38:39,235 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:38:39,237 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 628 (Add protocol required since Django4) b8c7989c9900270d7cf27523f2649bbb903c7a60' 2025-08-29 00:38:39,259 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-08-29 00:38:39,261 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-08-29 00:38:39,265 [ scc.git] DEBUG omeroweb/settings.py | 4 ++-- 2025-08-29 00:38:39,265 [ scc.git] DEBUG 1 file changed, 2 insertions(+), 2 deletions(-) 2025-08-29 00:38:39,477 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:39,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:38:39,689 [ scc.git] DEBUG Calling 'git submodule update' 2025-08-29 00:38:39,731 [ scc.git] DEBUG Get sha1 of %s 2025-08-29 00:38:39,731 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-08-29 00:38:39,733 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:38:39,775 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-29 00:38:39,783 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f47a7a26b10> has no local changes 2025-08-29 00:38:39,783 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) Already up to date. Merged PRs: - PR 168 stick 'Changes to nginx @maintenance handler' - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 619 DavidStirling 'Permit subpackages as app plugins' - PR 628 jburel 'Add protocol required since Django4' Generated by OMERO-python-superbuild-push#505 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/505/)' 2025-08-29 00:38:39,793 [ scc.git] DEBUG [detached HEAD 935f4e2a2] merge master -Dorg -Ssuccess-only 2025-08-29 00:38:39,793 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-29 00:38:39,794 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-08-29 00:38:39,845 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2025-08-29 00:38:39,941 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:40,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:38:40,130 [ scc.config] DEBUG Found submodule.omero-marshal.url 2025-08-29 00:38:40,375 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:40,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:38:40,593 [ scc.config] DEBUG Found submodule.omero-py.url 2025-08-29 00:38:40,838 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:41,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:38:41,029 [ scc.config] DEBUG Found submodule.omero-scripts.url 2025-08-29 00:38:41,274 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:41,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:38:41,479 [ scc.config] DEBUG Found submodule.omero-web.url 2025-08-29 00:38:41,724 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-08-29 00:38:41,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-08-29 00:38:41,930 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-08-29 00:38:41,959 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f47aa4b7150> has local changes 2025-08-29 00:38:41,959 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Repository: ome/omero-py Excluded PRs: - PR 470 multimeric 'Faux import' (user: multimeric) - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 472 sbesson 'Remove PyOpenSSL injection via urllib3' Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) Already up to date. Merged PRs: - PR 168 stick 'Changes to nginx @maintenance handler' - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 619 DavidStirling 'Permit subpackages as app plugins' - PR 628 jburel 'Add protocol required since Django4' Generated by OMERO-python-superbuild-push#505 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/505/)' 2025-08-29 00:38:41,967 [ scc.git] DEBUG [detached HEAD 1fc94bb] merge master -Dorg -Ssuccess-only 2025-08-29 00:38:41,968 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2025-08-29 00:38:41,968 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-08-29 00:38:41,968 [ scc.merge] INFO Already up to date. 2025-08-29 00:38:41,968 [ scc.merge] INFO 2025-08-29 00:38:41,968 [ scc.merge] INFO 2025-08-29 00:38:41,968 [ scc.merge] INFO Repository: ome/omero-dropbox 2025-08-29 00:38:41,968 [ scc.merge] INFO Already up to date. 2025-08-29 00:38:41,968 [ scc.merge] INFO 2025-08-29 00:38:41,968 [ scc.merge] INFO Merged PRs: 2025-08-29 00:38:41,968 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-08-29 00:38:41,968 [ scc.merge] INFO 2025-08-29 00:38:41,968 [ scc.merge] INFO Repository: ome/omero-marshal 2025-08-29 00:38:41,968 [ scc.merge] INFO Excluded PRs: 2025-08-29 00:38:41,968 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) 2025-08-29 00:38:41,968 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2025-08-29 00:38:41,968 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2025-08-29 00:38:41,968 [ scc.merge] INFO Already up to date. 2025-08-29 00:38:41,968 [ scc.merge] INFO 2025-08-29 00:38:41,968 [ scc.merge] INFO Merged PRs: 2025-08-29 00:38:41,968 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2025-08-29 00:38:41,968 [ scc.merge] INFO 2025-08-29 00:38:41,968 [ scc.merge] INFO Repository: ome/omero-py 2025-08-29 00:38:41,968 [ scc.merge] INFO Excluded PRs: 2025-08-29 00:38:41,968 [ scc.merge] INFO - PR 470 multimeric 'Faux import' (user: multimeric) 2025-08-29 00:38:41,968 [ scc.merge] INFO - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) 2025-08-29 00:38:41,969 [ scc.merge] INFO - PR 450 multimeric 'Add model stubs' (user: multimeric) 2025-08-29 00:38:41,969 [ scc.merge] INFO - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) 2025-08-29 00:38:41,969 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2025-08-29 00:38:41,969 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) 2025-08-29 00:38:41,969 [ scc.merge] INFO Already up to date. 2025-08-29 00:38:41,969 [ scc.merge] INFO 2025-08-29 00:38:41,969 [ scc.merge] INFO Merged PRs: 2025-08-29 00:38:41,969 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2025-08-29 00:38:41,969 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2025-08-29 00:38:41,969 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2025-08-29 00:38:41,969 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method' 2025-08-29 00:38:41,969 [ scc.merge] INFO - PR 472 sbesson 'Remove PyOpenSSL injection via urllib3' 2025-08-29 00:38:41,969 [ scc.merge] INFO 2025-08-29 00:38:41,969 [ scc.merge] INFO Repository: ome/omero-scripts 2025-08-29 00:38:41,969 [ scc.merge] INFO Excluded PRs: 2025-08-29 00:38:41,969 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-08-29 00:38:41,969 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-08-29 00:38:41,969 [ scc.merge] INFO Already up to date. 2025-08-29 00:38:41,969 [ scc.merge] INFO 2025-08-29 00:38:41,969 [ scc.merge] INFO Merged PRs: 2025-08-29 00:38:41,969 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-08-29 00:38:41,969 [ scc.merge] INFO 2025-08-29 00:38:41,969 [ scc.merge] INFO Conflicting PRs (not included): 2025-08-29 00:38:41,969 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-08-29 00:38:41,969 [ scc.merge] INFO 2025-08-29 00:38:41,969 [ scc.merge] INFO Repository: ome/omero-web 2025-08-29 00:38:41,969 [ scc.merge] INFO Excluded PRs: 2025-08-29 00:38:41,969 [ scc.merge] INFO - PR 629 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-08-29 00:38:41,969 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2025-08-29 00:38:41,969 [ scc.merge] INFO Already up to date. 2025-08-29 00:38:41,969 [ scc.merge] INFO 2025-08-29 00:38:41,969 [ scc.merge] INFO Merged PRs: 2025-08-29 00:38:41,969 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' 2025-08-29 00:38:41,969 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2025-08-29 00:38:41,969 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-08-29 00:38:41,969 [ scc.merge] INFO - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-08-29 00:38:41,969 [ scc.merge] INFO - PR 596 sukunis 'Linkify can parse anchor tag' 2025-08-29 00:38:41,969 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations' 2025-08-29 00:38:41,969 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf' 2025-08-29 00:38:41,970 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-08-29 00:38:41,970 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display' 2025-08-29 00:38:41,970 [ scc.merge] INFO - PR 619 DavidStirling 'Permit subpackages as app plugins' 2025-08-29 00:38:41,970 [ scc.merge] INFO - PR 628 jburel 'Add protocol required since Django4' 2025-08-29 00:38:41,970 [ scc.merge] INFO 2025-08-29 00:38:41,970 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-08-29 00:38:41,970 [ scc.git] DEBUG Calling 'git remote' 2025-08-29 00:38:41,972 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-08-29 00:38:41,972 [ scc.git] DEBUG Calling 'git remote' 2025-08-29 00:38:41,974 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-29 00:38:41,974 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-08-29 00:38:41,974 [ scc.git] DEBUG Calling 'git remote' 2025-08-29 00:38:41,976 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-29 00:38:41,976 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-08-29 00:38:41,976 [ scc.git] DEBUG Calling 'git remote' 2025-08-29 00:38:41,979 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-29 00:38:41,979 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-08-29 00:38:41,979 [ scc.git] DEBUG Calling 'git remote' 2025-08-29 00:38:41,981 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-08-29 00:38:41,981 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-08-29 00:38:41,981 [ scc.git] DEBUG Calling 'git remote' 2025-08-29 00:38:41,983 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from 01fa0c5 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from 6d44f66 nothing to commit, working tree clean Entering 'omero-py' HEAD detached from 70b6235a nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 573db34 nothing to commit, working tree clean Entering 'omero-web' HEAD detached from 2a7c4d2e3 nothing to commit, working tree clean HEAD detached from e505e49 nothing to commit, working tree clean 2025-08-29 00:39:12,049 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS