09:58:05 Started by user devspace
09:58:05 Running as SYSTEM
09:58:05 Building remotely on omero (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-server
09:58:05 [OMERO-server] $ /bin/bash -xe /tmp/jenkins10415652938130726938.sh
09:58:05 + source /home/settings.env
09:58:05 ++ OMERO_DB_HOST=pg
09:58:05 ++ OMERO_DB_USER=postgres
09:58:05 ++ OMERO_DB_PASS=
09:58:05 ++ OMERO_ROOT_PASS=omero
09:58:05 ++ OMERO_DATA_DIR=/OMERO
09:58:05 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
09:58:05 + OMERO_DB_NAME=OMERO-server
09:58:05 + OMERO_DIST=/home/omero/workspace/OMERO-server/OMERO.server
09:58:05 + export OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
09:58:05 + OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
09:58:05 + OMERO_DATA_DIR=/home/omero/omero-server-data
09:58:05 + '[' -e /home/omero/workspace/OMERO-server/OMERO.server ']'
09:58:05 + source /home/omero/workspace/OMERO-server/.venv3/bin/activate
09:58:05 ++ deactivate nondestructive
09:58:05 ++ '[' -n '' ']'
09:58:05 ++ '[' -n '' ']'
09:58:05 ++ '[' -n /bin/bash -o -n '' ']'
09:58:05 ++ hash -r
09:58:05 ++ '[' -n '' ']'
09:58:05 ++ unset VIRTUAL_ENV
09:58:05 ++ '[' '!' nondestructive = nondestructive ']'
09:58:05 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-server/.venv3
09:58:05 ++ export VIRTUAL_ENV
09:58:05 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
09:58:05 ++ PATH=/home/omero/workspace/OMERO-server/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
09:58:05 ++ export PATH
09:58:05 ++ '[' -n '' ']'
09:58:05 ++ '[' -z '' ']'
09:58:05 ++ _OLD_VIRTUAL_PS1=
09:58:05 ++ PS1='(.venv3) '
09:58:05 ++ export PS1
09:58:05 ++ '[' -n /bin/bash -o -n '' ']'
09:58:05 ++ hash -r
09:58:05 + omero admin stop
09:58:08 Waiting on shutdown. Use CTRL-C to exit
09:58:08 .+ sleep 5
09:58:24 + deactivate
09:58:24 + '[' -n /opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
09:58:24 + PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
09:58:24 + export PATH
09:58:24 + unset _OLD_VIRTUAL_PATH
09:58:24 + '[' -n '' ']'
09:58:24 + '[' -n /bin/bash -o -n '' ']'
09:58:24 + hash -r
09:58:24 + '[' -n '' ']'
09:58:24 + unset VIRTUAL_ENV
09:58:24 + '[' '!' '' = nondestructive ']'
09:58:24 + unset -f deactivate
09:58:24 + rm -rf /home/omero/workspace/OMERO-server/.venv3
09:58:26 + python3 -m venv /home/omero/workspace/OMERO-server/.venv3
09:58:29 + '[' false = true ']'
09:58:29 + echo 'Skipping PURGE_DATA:CleanDbAndRepo'
09:58:29 Skipping PURGE_DATA:CleanDbAndRepo
09:58:29 + rm -rf /home/omero/workspace/OMERO-server/omero-blitz-5.7.3-SNAPSHOT-python.zip /home/omero/workspace/OMERO-server/omero-dropbox-5.6.3.dev0.tar.gz /home/omero/workspace/OMERO-server/omero_marshal-0.9.1.dev0.tar.gz /home/omero/workspace/OMERO-server/omero-py-5.19.1.dev0.tar.gz /home/omero/workspace/OMERO-server/omero-scripts-5.8.1.dev0.tar.gz /home/omero/workspace/OMERO-server/OMERO.server /home/omero/workspace/OMERO-server/omero-web-5.25.1.dev0.tar.gz /home/omero/workspace/OMERO-server/version.properties
09:58:33 Copied 1 artifact from "OMERO-build" build number 8
09:58:33 Copied 5 artifacts from "OMERO-python-superbuild-build" build number 8
09:58:34 Copied 2 artifacts from "OMERO-build-build" build number 8
09:58:34 [OMERO-server] $ /bin/bash -xe /tmp/jenkins12856997319363863802.sh
09:58:34 + source /home/settings.env
09:58:34 ++ OMERO_DB_HOST=pg
09:58:34 ++ OMERO_DB_USER=postgres
09:58:34 ++ OMERO_DB_PASS=
09:58:34 ++ OMERO_ROOT_PASS=omero
09:58:34 ++ OMERO_DATA_DIR=/OMERO
09:58:34 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
09:58:34 + OMERO_DB_NAME=OMERO-server
09:58:34 + OMERO_DATA_DIR=/home/omero/omero-server-data
09:58:34 + mkdir -p /home/omero/omero-server-data
09:58:34 + OMERO_DIST=/home/omero/workspace/OMERO-server/OMERO.server
09:58:34 + export OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
09:58:34 + OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
09:58:34 + export ZIP_FILE=/home/omero/workspace/OMERO-server/omero-blitz-VERSION-python.zip
09:58:34 + ZIP_FILE=/home/omero/workspace/OMERO-server/omero-blitz-VERSION-python.zip
09:58:34 + export VERSION_PROPERTIES=/home/omero/workspace/OMERO-server/version.properties
09:58:34 + VERSION_PROPERTIES=/home/omero/workspace/OMERO-server/version.properties
09:58:34 ++ ls OMERO.server-5.6.3-437-b6fa9b6b2b-ice36.zip
09:58:34 + ZIP=OMERO.server-5.6.3-437-b6fa9b6b2b-ice36.zip
09:58:34 + '[' '!' -z '' ']'
09:58:34 + DIST=OMERO.server-5.6.3-437-b6fa9b6b2b-ice36
09:58:34 + unzip OMERO.server-5.6.3-437-b6fa9b6b2b-ice36.zip
09:58:34 Archive: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36.zip
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/etc/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/etc/blitz/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/etc/grid/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/etc/profiles/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/etc/templates/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/etc/templates/error/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/etc/templates/grid/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/scripts/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/scripts/luts/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/scripts/luts/janelia/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/scripts/luts/ncsa_paledit/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/scripts/luts/wcif/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/scripts/omero/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/scripts/omero/analysis_scripts/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/scripts/omero/annotation_scripts/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/scripts/omero/export_scripts/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/scripts/omero/figure_scripts/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/scripts/omero/import_scripts/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/scripts/omero/util_scripts/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/server/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/share/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/share/licenses/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/misc/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO3A__1/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO3A__10/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO3A__11/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO3A__2/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO3A__3/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO3A__4/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO3A__5/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO3A__6/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO3A__7/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO3A__8/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO3A__9/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO3__4/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO3__5/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO3__6/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO3__7/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO4.1__0/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO4.2__0/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO4.2__0/t/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO4.3__0/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO4.4__0/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO4__0/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO5.0__0/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO5.1__1/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO5.2__0/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO5.3__0/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO5.4DEV__1/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO5.4DEV__2/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO5.4DEV__3/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO5.4__0/
09:58:34 creating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/var/
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/LICENSE.txt
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/etc/backup.cfg
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/etc/blitz/mail-senders.example
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/etc/blitz/mail-server.example
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/etc/build.properties
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/etc/env.bat
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/etc/env.sh
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/etc/hibernate.properties
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/etc/ice.config
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/etc/logback-cli.xml
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/etc/logback-indexing-cli.xml
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/etc/logback-indexing.xml
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/etc/logback.xml
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/etc/mime.types
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/etc/node1.cfg
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/etc/node2.cfg
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/etc/omero.properties
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/etc/profiles/psql
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/etc/rollover.cfg
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/etc/templates/Windows.cfg
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/etc/templates/error/maintainance.html
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/etc/templates/grid/README
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/etc/templates/grid/default.xml
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/etc/templates/grid/templates.xml
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/etc/templates/grid/windefault.xml
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/etc/templates/ice.config
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/etc/templates/internal.cfg
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/etc/templates/master.cfg
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/etc/templates/robot.template
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/etc/testdropbox.config
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/history.rst
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/OMEZarrReader.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/activation.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/aggdesigner-algorithm.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/aircompressor.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/annotations.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/antlr.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/aopalliance.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/apache-client.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/arns.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/auth.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/avatica-core.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/avatica-metrics.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/aws-core.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/aws-query-protocol.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/aws-xml-protocol.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/base.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/batik-all.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/batik-anim.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/batik-awt-util.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/batik-bridge.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/batik-codec.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/batik-constants.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/batik-css.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/batik-dom.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/batik-ext.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/batik-extension.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/batik-gui-util.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/batik-gvt.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/batik-i18n.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/batik-parser.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/batik-rasterizer-ext.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/batik-rasterizer.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/batik-script.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/batik-slideshow.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/batik-squiggle-ext.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/batik-squiggle.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/batik-svg-dom.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/batik-svgbrowser.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/batik-svggen.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/batik-svgpp.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/batik-svgrasterizer.jar
09:58:34 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/lib/client/batik-swing.jar
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09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/share/licenses/which.txt
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/share/licenses/zlib-libpng.txt
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/share/licenses/zpl-v2.1.txt
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/README.txt
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/misc/Makefile
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/misc/current.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/misc/enums.py
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO3A__1/OMERO3__7.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO3A__10/OMERO3A__9.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO3A__11/OMERO3A__10.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO3A__11/OMERO3A__5.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO3A__2/OMERO3A__1.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO3A__3/OMERO3A__2.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO3A__3/OMERO3__5.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO3A__4/OMERO3A__3.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO3A__4/OMERO3__5.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO3A__5/OMERO3A__4.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO3A__6/OMERO3A__5.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO3A__7/OMERO3A__6.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO3A__8/OMERO3A__6.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO3A__9/OMERO3A__8.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO3__4/OMERO3__1.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO3__5/OMERO3__4.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO3__6/OMERO3__5.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO3__7/OMERO3__6.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO4.1__0/OMERO4__0.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO4.2__0/OMERO4.1__0.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO4.2__0/t/OMERO4.1__0.py
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO4.2__0/t/OMERO4.1__0.test
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO4.3__0/OMERO4.2__0.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO4.3__0/omero-4.2-data-fix.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO4.4__0/OMERO4.1__0.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO4.4__0/OMERO4.3__0.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO4__0/OMERO3A__11.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-fix.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-list.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO5.0__0/OMERO4.4__0.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO5.1__1/OMERO5.0__0.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO5.1__1/OMERO5.1-delete-and-disable-shares.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO5.1__1/OMERO5.1-enable-shares.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO5.1__1/OMERO5.1__0.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO5.2__0/OMERO5.1__1.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO5.2__0/OMERO5.2-delete-and-disable-shares.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO5.2__0/OMERO5.2-enable-shares.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO5.3__0/OMERO5.2__0-precheck.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO5.3__0/OMERO5.2__0.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO5.3__0/OMERO5.3-index-files.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO5.3__0/delete-ns-orphans.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO5.3__0/reverse_shape_color_argb_to_rgba.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO5.3__0/shape_color_argb_to_rgba.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO5.4DEV__1/OMERO5.4DEV__0.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO5.4DEV__2/OMERO5.4DEV__1.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO5.4DEV__3/OMERO5.4DEV__2.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO5.4__0/OMERO5.3__0-precheck.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO5.4__0/OMERO5.3__0.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO5.4__0/OMERO5.3__1-precheck.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO5.4__0/OMERO5.3__1.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO5.4__0/OMERO5.4DEV__3.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO5.4__0/allow-guest-user-without-password.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO5.4__0/psql-footer.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO5.4__0/psql-header.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO5.4__0/schema.sql
09:58:36 inflating: OMERO.server-5.6.3-437-b6fa9b6b2b-ice36/sql/psql/OMERO5.4__0/views.sql
09:58:36 + rm -f OMERO.server-5.6.3-437-b6fa9b6b2b-ice36.zip
09:58:37 + mv /home/omero/workspace/OMERO-server/OMERO.server-5.6.3-437-b6fa9b6b2b-ice36 /home/omero/workspace/OMERO-server/OMERO.server
09:58:37 + source /home/omero/workspace/OMERO-server/.venv3/bin/activate
09:58:37 ++ deactivate nondestructive
09:58:37 ++ '[' -n '' ']'
09:58:37 ++ '[' -n '' ']'
09:58:37 ++ '[' -n /bin/bash -o -n '' ']'
09:58:37 ++ hash -r
09:58:37 ++ '[' -n '' ']'
09:58:37 ++ unset VIRTUAL_ENV
09:58:37 ++ '[' '!' nondestructive = nondestructive ']'
09:58:37 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-server/.venv3
09:58:37 ++ export VIRTUAL_ENV
09:58:37 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
09:58:37 ++ PATH=/home/omero/workspace/OMERO-server/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
09:58:37 ++ export PATH
09:58:37 ++ '[' -n '' ']'
09:58:37 ++ '[' -z '' ']'
09:58:37 ++ _OLD_VIRTUAL_PS1=
09:58:37 ++ PS1='(.venv3) '
09:58:37 ++ export PS1
09:58:37 ++ '[' -n /bin/bash -o -n '' ']'
09:58:37 ++ hash -r
09:58:37 + pip install https://github.com/glencoesoftware/zeroc-ice-py-rhel9-x86_64/releases/download/20230830/zeroc_ice-3.6.5-cp39-cp39-linux_x86_64.whl
09:58:37 Collecting zeroc-ice==3.6.5
09:58:38 Downloading https://github.com/glencoesoftware/zeroc-ice-py-rhel9-x86_64/releases/download/20230830/zeroc_ice-3.6.5-cp39-cp39-linux_x86_64.whl (31.3 MB)
09:58:39 Installing collected packages: zeroc-ice
09:58:40 Successfully installed zeroc-ice-3.6.5
09:58:40 + pip install -U pip future
09:58:40 Requirement already satisfied: pip in ./.venv3/lib/python3.9/site-packages (21.2.3)
09:58:41 Collecting pip
09:58:41 Using cached pip-24.0-py3-none-any.whl (2.1 MB)
09:58:41 Collecting future
09:58:41 Using cached future-1.0.0-py3-none-any.whl (491 kB)
09:58:41 Installing collected packages: pip, future
09:58:41 Attempting uninstall: pip
09:58:41 Found existing installation: pip 21.2.3
09:58:41 Uninstalling pip-21.2.3:
09:58:41 Successfully uninstalled pip-21.2.3
09:58:43 Successfully installed future-1.0.0 pip-24.0
09:58:43 + pip install markdown
09:58:44 Collecting markdown
09:58:44 Using cached Markdown-3.6-py3-none-any.whl.metadata (7.0 kB)
09:58:44 Collecting importlib-metadata>=4.4 (from markdown)
09:58:44 Using cached importlib_metadata-7.1.0-py3-none-any.whl.metadata (4.7 kB)
09:58:44 Collecting zipp>=0.5 (from importlib-metadata>=4.4->markdown)
09:58:44 Using cached zipp-3.18.1-py3-none-any.whl.metadata (3.5 kB)
09:58:44 Using cached Markdown-3.6-py3-none-any.whl (105 kB)
09:58:44 Using cached importlib_metadata-7.1.0-py3-none-any.whl (24 kB)
09:58:44 Using cached zipp-3.18.1-py3-none-any.whl (8.2 kB)
09:58:44 Installing collected packages: zipp, importlib-metadata, markdown
09:58:44 Successfully installed importlib-metadata-7.1.0 markdown-3.6 zipp-3.18.1
09:58:44 + pip install reportlab
09:58:45 Collecting reportlab
09:58:45 Using cached reportlab-4.1.0-py3-none-any.whl.metadata (1.4 kB)
09:58:46 Collecting pillow>=9.0.0 (from reportlab)
09:58:46 Using cached pillow-10.2.0-cp39-cp39-manylinux_2_28_x86_64.whl.metadata (9.7 kB)
09:58:46 Collecting chardet (from reportlab)
09:58:46 Using cached chardet-5.2.0-py3-none-any.whl.metadata (3.4 kB)
09:58:46 Using cached reportlab-4.1.0-py3-none-any.whl (1.9 MB)
09:58:46 Using cached pillow-10.2.0-cp39-cp39-manylinux_2_28_x86_64.whl (4.5 MB)
09:58:46 Using cached chardet-5.2.0-py3-none-any.whl (199 kB)
09:58:46 Installing collected packages: pillow, chardet, reportlab
09:58:47 Successfully installed chardet-5.2.0 pillow-10.2.0 reportlab-4.1.0
09:58:47 + pip install omego
09:58:48 Collecting omego
09:58:48 Using cached omego-0.7.0-py3-none-any.whl
09:58:48 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omego) (1.0.0)
09:58:48 Collecting yaclifw>=0.1.1 (from omego)
09:58:48 Using cached yaclifw-0.2.0-py3-none-any.whl
09:58:48 Collecting six (from yaclifw>=0.1.1->omego)
09:58:48 Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB)
09:58:48 Using cached six-1.16.0-py2.py3-none-any.whl (11 kB)
09:58:48 Installing collected packages: six, yaclifw, omego
09:58:48 Successfully installed omego-0.7.0 six-1.16.0 yaclifw-0.2.0
09:58:48 + pip install tables
09:58:49 Collecting tables
09:58:49 Using cached tables-3.9.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.3 kB)
09:58:49 Collecting numpy>=1.19.0 (from tables)
09:58:49 Using cached numpy-1.26.4-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (61 kB)
09:58:50 Collecting numexpr>=2.6.2 (from tables)
09:58:50 Using cached numexpr-2.9.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (7.9 kB)
09:58:50 Collecting packaging (from tables)
09:58:50 Using cached packaging-24.0-py3-none-any.whl.metadata (3.2 kB)
09:58:50 Collecting py-cpuinfo (from tables)
09:58:50 Using cached py_cpuinfo-9.0.0-py3-none-any.whl.metadata (794 bytes)
09:58:50 Collecting blosc2>=2.3.0 (from tables)
09:58:50 Using cached blosc2-2.5.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (9.2 kB)
09:58:50 Collecting ndindex>=1.4 (from blosc2>=2.3.0->tables)
09:58:50 Using cached ndindex-1.8-py3-none-any.whl.metadata (3.4 kB)
09:58:50 Collecting msgpack (from blosc2>=2.3.0->tables)
09:58:50 Using cached msgpack-1.0.8-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (9.1 kB)
09:58:50 Using cached tables-3.9.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (7.5 MB)
09:58:50 Using cached blosc2-2.5.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (4.4 MB)
09:58:50 Using cached numexpr-2.9.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (374 kB)
09:58:50 Using cached numpy-1.26.4-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (18.2 MB)
09:58:50 Using cached packaging-24.0-py3-none-any.whl (53 kB)
09:58:50 Using cached py_cpuinfo-9.0.0-py3-none-any.whl (22 kB)
09:58:50 Using cached ndindex-1.8-py3-none-any.whl (91 kB)
09:58:50 Using cached msgpack-1.0.8-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (385 kB)
09:58:51 Installing collected packages: py-cpuinfo, packaging, numpy, ndindex, msgpack, numexpr, blosc2, tables
09:58:54 Successfully installed blosc2-2.5.1 msgpack-1.0.8 ndindex-1.8 numexpr-2.9.0 numpy-1.26.4 packaging-24.0 py-cpuinfo-9.0.0 tables-3.9.2
09:58:54 + pip install jinja2
09:58:54 Collecting jinja2
09:58:54 Using cached Jinja2-3.1.3-py3-none-any.whl.metadata (3.3 kB)
09:58:54 Collecting MarkupSafe>=2.0 (from jinja2)
09:58:54 Using cached MarkupSafe-2.1.5-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (3.0 kB)
09:58:54 Using cached Jinja2-3.1.3-py3-none-any.whl (133 kB)
09:58:54 Using cached MarkupSafe-2.1.5-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (25 kB)
09:58:54 Installing collected packages: MarkupSafe, jinja2
09:58:55 Successfully installed MarkupSafe-2.1.5 jinja2-3.1.3
09:58:55 + pip install omero-py
09:58:55 Collecting omero-py
09:58:55 Using cached omero_py-5.19.0-py3-none-any.whl.metadata (6.6 kB)
09:58:55 Collecting urllib3<2 (from omero-py)
09:58:55 Using cached urllib3-1.26.18-py2.py3-none-any.whl.metadata (48 kB)
09:58:55 Collecting appdirs (from omero-py)
09:58:55 Using cached appdirs-1.4.4-py2.py3-none-any.whl.metadata (9.0 kB)
09:58:55 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py) (1.0.0)
09:58:55 Requirement already satisfied: numpy in ./.venv3/lib/python3.9/site-packages (from omero-py) (1.26.4)
09:58:55 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py) (10.2.0)
09:58:55 Collecting PyYAML (from omero-py)
09:58:55 Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB)
09:58:55 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py) (3.6.5)
09:58:56 Collecting requests (from omero-py)
09:58:56 Using cached requests-2.31.0-py3-none-any.whl.metadata (4.6 kB)
09:58:56 Collecting portalocker (from omero-py)
09:58:56 Using cached portalocker-2.8.2-py3-none-any.whl.metadata (8.5 kB)
09:58:56 Collecting charset-normalizer<4,>=2 (from requests->omero-py)
09:58:56 Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB)
09:58:56 Collecting idna<4,>=2.5 (from requests->omero-py)
09:58:56 Using cached idna-3.6-py3-none-any.whl.metadata (9.9 kB)
09:58:56 Collecting certifi>=2017.4.17 (from requests->omero-py)
09:58:56 Using cached certifi-2024.2.2-py3-none-any.whl.metadata (2.2 kB)
09:58:56 Using cached omero_py-5.19.0-py3-none-any.whl (2.8 MB)
09:58:56 Using cached urllib3-1.26.18-py2.py3-none-any.whl (143 kB)
09:58:56 Using cached appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB)
09:58:56 Using cached portalocker-2.8.2-py3-none-any.whl (17 kB)
09:58:56 Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB)
09:58:57 Using cached requests-2.31.0-py3-none-any.whl (62 kB)
09:58:57 Using cached certifi-2024.2.2-py3-none-any.whl (163 kB)
09:58:57 Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB)
09:58:57 Using cached idna-3.6-py3-none-any.whl (61 kB)
09:58:57 Installing collected packages: appdirs, urllib3, PyYAML, portalocker, idna, charset-normalizer, certifi, requests, omero-py
09:58:59 Successfully installed PyYAML-6.0.1 appdirs-1.4.4 certifi-2024.2.2 charset-normalizer-3.3.2 idna-3.6 omero-py-5.19.0 portalocker-2.8.2 requests-2.31.0 urllib3-1.26.18
09:58:59 + pip install git+https://github.com/snoopycrimecop/omero-metadata.git@merge_ci#egg=omero-metadata
09:58:59 Collecting omero-metadata
09:58:59 Cloning https://github.com/snoopycrimecop/omero-metadata.git (to revision merge_ci) to /tmp/pip-install-dhto3aar/omero-metadata_627bdba1d59e420dbff8518f1e830041
09:58:59 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-metadata.git /tmp/pip-install-dhto3aar/omero-metadata_627bdba1d59e420dbff8518f1e830041
09:59:00 Resolved https://github.com/snoopycrimecop/omero-metadata.git to commit 26b852b76b23ec47c61047b66791a51e114c1740
09:59:00 Installing build dependencies: started
09:59:02 Installing build dependencies: finished with status 'done'
09:59:02 Getting requirements to build wheel: started
09:59:02 Getting requirements to build wheel: finished with status 'done'
09:59:02 Installing backend dependencies: started
09:59:03 Installing backend dependencies: finished with status 'done'
09:59:03 Preparing metadata (pyproject.toml): started
09:59:03 Preparing metadata (pyproject.toml): finished with status 'done'
09:59:03 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib/python3.9/site-packages (from omero-metadata) (5.19.0)
09:59:03 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-metadata) (6.0.1)
09:59:03 Requirement already satisfied: jinja2 in ./.venv3/lib/python3.9/site-packages (from omero-metadata) (3.1.3)
09:59:03 Collecting pandas (from omero-metadata)
09:59:03 Using cached pandas-2.2.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (19 kB)
09:59:03 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (1.26.18)
09:59:03 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (1.4.4)
09:59:03 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (1.0.0)
09:59:03 Requirement already satisfied: numpy in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (1.26.4)
09:59:04 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (10.2.0)
09:59:04 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (3.6.5)
09:59:04 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (2.31.0)
09:59:04 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-metadata) (2.8.2)
09:59:04 Requirement already satisfied: MarkupSafe>=2.0 in ./.venv3/lib/python3.9/site-packages (from jinja2->omero-metadata) (2.1.5)
09:59:04 Collecting python-dateutil>=2.8.2 (from pandas->omero-metadata)
09:59:04 Using cached python_dateutil-2.9.0.post0-py2.py3-none-any.whl.metadata (8.4 kB)
09:59:04 Collecting pytz>=2020.1 (from pandas->omero-metadata)
09:59:04 Using cached pytz-2024.1-py2.py3-none-any.whl.metadata (22 kB)
09:59:04 Collecting tzdata>=2022.7 (from pandas->omero-metadata)
09:59:04 Using cached tzdata-2024.1-py2.py3-none-any.whl.metadata (1.4 kB)
09:59:04 Requirement already satisfied: six>=1.5 in ./.venv3/lib/python3.9/site-packages (from python-dateutil>=2.8.2->pandas->omero-metadata) (1.16.0)
09:59:04 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (3.3.2)
09:59:04 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (3.6)
09:59:04 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (2024.2.2)
09:59:04 Using cached pandas-2.2.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (13.0 MB)
09:59:05 Using cached python_dateutil-2.9.0.post0-py2.py3-none-any.whl (229 kB)
09:59:05 Using cached pytz-2024.1-py2.py3-none-any.whl (505 kB)
09:59:05 Using cached tzdata-2024.1-py2.py3-none-any.whl (345 kB)
09:59:05 Building wheels for collected packages: omero-metadata
09:59:05 Building wheel for omero-metadata (pyproject.toml): started
09:59:05 Building wheel for omero-metadata (pyproject.toml): finished with status 'done'
09:59:05 Created wheel for omero-metadata: filename=omero_metadata-0.12.1.dev0-py3-none-any.whl size=39111 sha256=1fb81076dfc71fe56c426a49b3abc06b7d2946fb2faca84a01213fc5916b5bcd
09:59:05 Stored in directory: /tmp/pip-ephem-wheel-cache-jod5dtuu/wheels/64/09/47/3b86b706f8f6f4bec1b7fd6641d2e4a09814e754fa4c85c82d
09:59:05 Successfully built omero-metadata
09:59:05 Installing collected packages: pytz, tzdata, python-dateutil, pandas, omero-metadata
09:59:10 Successfully installed omero-metadata-0.12.1.dev0 pandas-2.2.1 python-dateutil-2.9.0.post0 pytz-2024.1 tzdata-2024.1
09:59:10 + pip install git+https://github.com/snoopycrimecop/omero-cli-render.git@merge_ci#egg=omero-cli-render
09:59:10 Collecting omero-cli-render
09:59:10 Cloning https://github.com/snoopycrimecop/omero-cli-render.git (to revision merge_ci) to /tmp/pip-install-t5tc9xvk/omero-cli-render_6f3cf56e3e52428aba41c91c023f71da
09:59:10 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-cli-render.git /tmp/pip-install-t5tc9xvk/omero-cli-render_6f3cf56e3e52428aba41c91c023f71da
09:59:12 Running command git checkout -b merge_ci --track origin/merge_ci
09:59:12 Switched to a new branch 'merge_ci'
09:59:12 branch 'merge_ci' set up to track 'origin/merge_ci'.
09:59:12 Resolved https://github.com/snoopycrimecop/omero-cli-render.git to commit 2e82235efa9d384e0938b58c612440067a814cc2
09:59:12 Installing build dependencies: started
09:59:14 Installing build dependencies: finished with status 'done'
09:59:14 Getting requirements to build wheel: started
09:59:14 Getting requirements to build wheel: finished with status 'done'
09:59:14 Installing backend dependencies: started
09:59:15 Installing backend dependencies: finished with status 'done'
09:59:15 Preparing metadata (pyproject.toml): started
09:59:15 Preparing metadata (pyproject.toml): finished with status 'done'
09:59:15 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-cli-render) (6.0.1)
09:59:15 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib/python3.9/site-packages (from omero-cli-render) (5.19.0)
09:59:15 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-cli-render) (1.0.0)
09:59:15 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-cli-render) (1.26.18)
09:59:15 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-cli-render) (1.4.4)
09:59:15 Requirement already satisfied: numpy in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-cli-render) (1.26.4)
09:59:15 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-cli-render) (10.2.0)
09:59:15 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-cli-render) (3.6.5)
09:59:15 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-cli-render) (2.31.0)
09:59:15 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-cli-render) (2.8.2)
09:59:15 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (3.3.2)
09:59:15 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (3.6)
09:59:15 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (2024.2.2)
09:59:15 Building wheels for collected packages: omero-cli-render
09:59:15 Building wheel for omero-cli-render (pyproject.toml): started
09:59:15 Building wheel for omero-cli-render (pyproject.toml): finished with status 'done'
09:59:15 Created wheel for omero-cli-render: filename=omero_cli_render-0.8.1.dev0-py3-none-any.whl size=18018 sha256=ecb5942d03dce20e74d54a2f85264005bc4c61c40cdd90f4d8525359fabc9491
09:59:15 Stored in directory: /tmp/pip-ephem-wheel-cache-k4bcx7_k/wheels/58/32/1b/746489b3c7c17a98c6cd7195bdd3b426dd4137caeb1045a994
09:59:15 Successfully built omero-cli-render
09:59:15 Installing collected packages: omero-cli-render
09:59:15 Successfully installed omero-cli-render-0.8.1.dev0
09:59:15 + pip install git+https://github.com/snoopycrimecop/omero-cli-duplicate.git@merge_ci#egg=omero-cli-duplicate
09:59:16 Collecting omero-cli-duplicate
09:59:16 Cloning https://github.com/snoopycrimecop/omero-cli-duplicate.git (to revision merge_ci) to /tmp/pip-install-jxo3q56o/omero-cli-duplicate_7b9b3f994f7249fe98354dea373b608a
09:59:16 Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-cli-duplicate.git /tmp/pip-install-jxo3q56o/omero-cli-duplicate_7b9b3f994f7249fe98354dea373b608a
09:59:17 Running command git checkout -b merge_ci --track origin/merge_ci
09:59:17 Switched to a new branch 'merge_ci'
09:59:17 branch 'merge_ci' set up to track 'origin/merge_ci'.
09:59:17 Resolved https://github.com/snoopycrimecop/omero-cli-duplicate.git to commit 3ecc423baacc817216f8ce161bfb8640057ff81f
09:59:17 Installing build dependencies: started
09:59:19 Installing build dependencies: finished with status 'done'
09:59:19 Getting requirements to build wheel: started
09:59:19 Getting requirements to build wheel: finished with status 'done'
09:59:19 Installing backend dependencies: started
09:59:20 Installing backend dependencies: finished with status 'done'
09:59:20 Preparing metadata (pyproject.toml): started
09:59:20 Preparing metadata (pyproject.toml): finished with status 'done'
09:59:20 Requirement already satisfied: omero-py>=5.8 in ./.venv3/lib/python3.9/site-packages (from omero-cli-duplicate) (5.19.0)
09:59:20 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.26.18)
09:59:20 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.4.4)
09:59:20 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.0.0)
09:59:20 Requirement already satisfied: numpy in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.26.4)
09:59:20 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (10.2.0)
09:59:20 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (6.0.1)
09:59:20 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (3.6.5)
09:59:20 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (2.31.0)
09:59:20 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.8->omero-cli-duplicate) (2.8.2)
09:59:20 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (3.3.2)
09:59:20 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (3.6)
09:59:20 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (2024.2.2)
09:59:20 Building wheels for collected packages: omero-cli-duplicate
09:59:20 Building wheel for omero-cli-duplicate (pyproject.toml): started
09:59:20 Building wheel for omero-cli-duplicate (pyproject.toml): finished with status 'done'
09:59:20 Created wheel for omero-cli-duplicate: filename=omero_cli_duplicate-0.4.1.dev0-py3-none-any.whl size=11443 sha256=63be0e19d00c5f77746797760f0afba437a394ae1244c3a57fabb2b08bc1b729
09:59:20 Stored in directory: /tmp/pip-ephem-wheel-cache-w3vy6qqe/wheels/f1/55/ac/0cb8b093a4c417e5157143839711e7613efa64eaa21c29ef84
09:59:20 Successfully built omero-cli-duplicate
09:59:20 Installing collected packages: omero-cli-duplicate
09:59:20 Successfully installed omero-cli-duplicate-0.4.1.dev0
09:59:21 + pip install omero-certificates
09:59:21 Collecting omero-certificates
09:59:21 Using cached omero_certificates-0.3.2-py3-none-any.whl.metadata (3.7 kB)
09:59:21 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib/python3.9/site-packages (from omero-certificates) (5.19.0)
09:59:21 Collecting distro==1.8.0 (from omero-certificates)
09:59:21 Using cached distro-1.8.0-py3-none-any.whl.metadata (6.9 kB)
09:59:21 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (1.26.18)
09:59:21 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (1.4.4)
09:59:21 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (1.0.0)
09:59:21 Requirement already satisfied: numpy in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (1.26.4)
09:59:21 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (10.2.0)
09:59:21 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (6.0.1)
09:59:21 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (3.6.5)
09:59:21 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (2.31.0)
09:59:21 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.6.0->omero-certificates) (2.8.2)
09:59:21 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (3.3.2)
09:59:21 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (3.6)
09:59:21 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (2024.2.2)
09:59:21 Using cached omero_certificates-0.3.2-py3-none-any.whl (13 kB)
09:59:21 Using cached distro-1.8.0-py3-none-any.whl (20 kB)
09:59:21 Installing collected packages: distro, omero-certificates
09:59:21 Successfully installed distro-1.8.0 omero-certificates-0.3.2
09:59:22 + for x in *.tar.gz
09:59:22 + pip install -U omero-dropbox-5.6.3.dev0.tar.gz
09:59:22 Processing ./omero-dropbox-5.6.3.dev0.tar.gz
09:59:22 Installing build dependencies: started
09:59:24 Installing build dependencies: finished with status 'done'
09:59:24 Getting requirements to build wheel: started
09:59:24 Getting requirements to build wheel: finished with status 'done'
09:59:24 Installing backend dependencies: started
09:59:25 Installing backend dependencies: finished with status 'done'
09:59:25 Preparing metadata (pyproject.toml): started
09:59:25 Preparing metadata (pyproject.toml): finished with status 'done'
09:59:25 Requirement already satisfied: omero-py in ./.venv3/lib/python3.9/site-packages (from omero-dropbox==5.6.3.dev0) (5.19.0)
09:59:25 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.6.3.dev0) (1.26.18)
09:59:25 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.6.3.dev0) (1.4.4)
09:59:25 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.6.3.dev0) (1.0.0)
09:59:25 Requirement already satisfied: numpy in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.6.3.dev0) (1.26.4)
09:59:25 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.6.3.dev0) (10.2.0)
09:59:25 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.6.3.dev0) (6.0.1)
09:59:25 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.6.3.dev0) (3.6.5)
09:59:25 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.6.3.dev0) (2.31.0)
09:59:25 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py->omero-dropbox==5.6.3.dev0) (2.8.2)
09:59:25 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py->omero-dropbox==5.6.3.dev0) (3.3.2)
09:59:25 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py->omero-dropbox==5.6.3.dev0) (3.6)
09:59:25 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py->omero-dropbox==5.6.3.dev0) (2024.2.2)
09:59:25 Building wheels for collected packages: omero-dropbox
09:59:25 Building wheel for omero-dropbox (pyproject.toml): started
09:59:25 Building wheel for omero-dropbox (pyproject.toml): finished with status 'done'
09:59:25 Created wheel for omero-dropbox: filename=omero_dropbox-5.6.3.dev0-py3-none-any.whl size=49057 sha256=adcda22a01be903e35cbe8a1d04394ecc0928f95bfd8aefefca2870eb35e71f0
09:59:25 Stored in directory: /home/omero/.cache/pip/wheels/a5/63/29/4452e52704e5ad491f397a0013b20ebb9d413ceb110f8101d1
09:59:25 Successfully built omero-dropbox
09:59:25 Installing collected packages: omero-dropbox
09:59:25 Successfully installed omero-dropbox-5.6.3.dev0
09:59:25 + for x in *.tar.gz
09:59:25 + pip install -U omero_marshal-0.9.1.dev0.tar.gz
09:59:26 Processing ./omero_marshal-0.9.1.dev0.tar.gz
09:59:26 Installing build dependencies: started
09:59:27 Installing build dependencies: finished with status 'done'
09:59:27 Getting requirements to build wheel: started
09:59:28 Getting requirements to build wheel: finished with status 'done'
09:59:28 Installing backend dependencies: started
09:59:28 Installing backend dependencies: finished with status 'done'
09:59:28 Preparing metadata (pyproject.toml): started
09:59:29 Preparing metadata (pyproject.toml): finished with status 'done'
09:59:29 Building wheels for collected packages: omero_marshal
09:59:29 Building wheel for omero_marshal (pyproject.toml): started
09:59:29 Building wheel for omero_marshal (pyproject.toml): finished with status 'done'
09:59:29 Created wheel for omero_marshal: filename=omero_marshal-0.9.1.dev0-py3-none-any.whl size=88031 sha256=d61371e712305efdf3222704f3ec2eb2050372b0aeb09d57df1a37dcfc6d44f4
09:59:29 Stored in directory: /home/omero/.cache/pip/wheels/8b/40/f1/dbed071eff57c96e0824ead2a420a7a1a080f7fbdfe0431d7f
09:59:29 Successfully built omero_marshal
09:59:29 Installing collected packages: omero_marshal
09:59:29 Successfully installed omero_marshal-0.9.1.dev0
09:59:29 + for x in *.tar.gz
09:59:29 + pip install -U omero-py-5.19.1.dev0.tar.gz
09:59:30 Processing ./omero-py-5.19.1.dev0.tar.gz
09:59:30 Installing build dependencies: started
09:59:32 Installing build dependencies: finished with status 'done'
09:59:32 Getting requirements to build wheel: started
09:59:32 Getting requirements to build wheel: finished with status 'done'
09:59:32 Installing backend dependencies: started
09:59:33 Installing backend dependencies: finished with status 'done'
09:59:33 Preparing metadata (pyproject.toml): started
09:59:33 Preparing metadata (pyproject.toml): finished with status 'done'
09:59:33 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.1.dev0) (1.26.18)
09:59:33 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.1.dev0) (1.4.4)
09:59:33 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.1.dev0) (1.0.0)
09:59:33 Requirement already satisfied: numpy in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.1.dev0) (1.26.4)
09:59:33 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.1.dev0) (10.2.0)
09:59:33 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.1.dev0) (6.0.1)
09:59:33 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.1.dev0) (3.6.5)
09:59:33 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.1.dev0) (2.31.0)
09:59:33 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-py==5.19.1.dev0) (2.8.2)
09:59:33 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py==5.19.1.dev0) (3.3.2)
09:59:33 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py==5.19.1.dev0) (3.6)
09:59:33 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py==5.19.1.dev0) (2024.2.2)
09:59:33 Building wheels for collected packages: omero-py
09:59:33 Building wheel for omero-py (pyproject.toml): started
09:59:34 Building wheel for omero-py (pyproject.toml): finished with status 'done'
09:59:34 Created wheel for omero-py: filename=omero_py-5.19.1.dev0-py3-none-any.whl size=2781680 sha256=bd5b7ace230f2c0622fc72e024b907e796c62f0393db4b3e19d91082963e9400
09:59:34 Stored in directory: /home/omero/.cache/pip/wheels/52/ce/ea/f5d1427ab67c2783e3f124f0ebf8311109c5ac331893a591ad
09:59:34 Successfully built omero-py
09:59:34 Installing collected packages: omero-py
09:59:34 Attempting uninstall: omero-py
09:59:34 Found existing installation: omero-py 5.19.0
09:59:34 Uninstalling omero-py-5.19.0:
09:59:35 Successfully uninstalled omero-py-5.19.0
09:59:37 Successfully installed omero-py-5.19.1.dev0
09:59:37 + for x in *.tar.gz
09:59:37 + pip install -U omero-scripts-5.8.1.dev0.tar.gz
09:59:37 Processing ./omero-scripts-5.8.1.dev0.tar.gz
09:59:37 Installing build dependencies: started
09:59:39 Installing build dependencies: finished with status 'done'
09:59:39 Getting requirements to build wheel: started
09:59:39 Getting requirements to build wheel: finished with status 'done'
09:59:39 Installing backend dependencies: started
09:59:40 Installing backend dependencies: finished with status 'done'
09:59:40 Preparing metadata (pyproject.toml): started
09:59:40 Preparing metadata (pyproject.toml): finished with status 'done'
09:59:40 Building wheels for collected packages: omero-scripts
09:59:40 Building wheel for omero-scripts (pyproject.toml): started
09:59:41 Building wheel for omero-scripts (pyproject.toml): finished with status 'done'
09:59:41 Created wheel for omero-scripts: filename=omero_scripts-5.8.1.dev0-py3-none-any.whl size=116570 sha256=d85634ddb3f5c83c75f4f557b327845f0bba0929cd83afb1a43235637882ed0b
09:59:41 Stored in directory: /home/omero/.cache/pip/wheels/ef/a0/80/e3393129cedc64a3ad2b8c2fa437d83a3d318cba65d425f5cf
09:59:41 Successfully built omero-scripts
09:59:41 Installing collected packages: omero-scripts
09:59:41 Successfully installed omero-scripts-5.8.1.dev0
09:59:41 + for x in *.tar.gz
09:59:41 + pip install -U omero-web-5.25.1.dev0.tar.gz
09:59:42 Processing ./omero-web-5.25.1.dev0.tar.gz
09:59:42 Installing build dependencies: started
09:59:44 Installing build dependencies: finished with status 'done'
09:59:44 Getting requirements to build wheel: started
09:59:44 Getting requirements to build wheel: finished with status 'done'
09:59:44 Installing backend dependencies: started
09:59:45 Installing backend dependencies: finished with status 'done'
09:59:45 Preparing metadata (pyproject.toml): started
09:59:45 Preparing metadata (pyproject.toml): finished with status 'done'
09:59:45 Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib/python3.9/site-packages (from omero-web==5.25.1.dev0) (5.19.1.dev0)
09:59:45 Collecting concurrent-log-handler>=0.9.20 (from omero-web==5.25.1.dev0)
09:59:45 Using cached concurrent_log_handler-0.9.25-py3-none-any.whl.metadata (17 kB)
09:59:45 Collecting Django<4.3,>=4.2.3 (from omero-web==5.25.1.dev0)
09:59:45 Using cached Django-4.2.11-py3-none-any.whl.metadata (4.2 kB)
09:59:45 Collecting django-pipeline==2.1.0 (from omero-web==5.25.1.dev0)
09:59:45 Using cached django_pipeline-2.1.0-py3-none-any.whl.metadata (12 kB)
09:59:45 Collecting django-cors-headers==3.7.0 (from omero-web==5.25.1.dev0)
09:59:45 Using cached django_cors_headers-3.7.0-py3-none-any.whl.metadata (15 kB)
09:59:46 Collecting django-csp (from omero-web==5.25.1.dev0)
09:59:46 Using cached django_csp-3.8-py3-none-any.whl.metadata (2.7 kB)
09:59:46 Collecting whitenoise>=5.3.0 (from omero-web==5.25.1.dev0)
09:59:46 Using cached whitenoise-6.6.0-py3-none-any.whl.metadata (3.7 kB)
09:59:46 Collecting gunicorn>=19.3 (from omero-web==5.25.1.dev0)
09:59:46 Using cached gunicorn-21.2.0-py3-none-any.whl.metadata (4.1 kB)
09:59:46 Requirement already satisfied: omero-marshal>=0.7.0 in ./.venv3/lib/python3.9/site-packages (from omero-web==5.25.1.dev0) (0.9.1.dev0)
09:59:46 Requirement already satisfied: Pillow in ./.venv3/lib/python3.9/site-packages (from omero-web==5.25.1.dev0) (10.2.0)
09:59:46 Requirement already satisfied: pytz in ./.venv3/lib/python3.9/site-packages (from omero-web==5.25.1.dev0) (2024.1)
09:59:46 Requirement already satisfied: portalocker in ./.venv3/lib/python3.9/site-packages (from omero-web==5.25.1.dev0) (2.8.2)
09:59:46 Requirement already satisfied: packaging in ./.venv3/lib/python3.9/site-packages (from omero-web==5.25.1.dev0) (24.0)
09:59:46 Collecting asgiref<4,>=3.6.0 (from Django<4.3,>=4.2.3->omero-web==5.25.1.dev0)
09:59:46 Using cached asgiref-3.8.0-py3-none-any.whl.metadata (9.3 kB)
09:59:46 Collecting sqlparse>=0.3.1 (from Django<4.3,>=4.2.3->omero-web==5.25.1.dev0)
09:59:46 Using cached sqlparse-0.4.4-py3-none-any.whl.metadata (4.0 kB)
09:59:46 Requirement already satisfied: urllib3<2 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.25.1.dev0) (1.26.18)
09:59:46 Requirement already satisfied: appdirs in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.25.1.dev0) (1.4.4)
09:59:46 Requirement already satisfied: future in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.25.1.dev0) (1.0.0)
09:59:46 Requirement already satisfied: numpy in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.25.1.dev0) (1.26.4)
09:59:46 Requirement already satisfied: PyYAML in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.25.1.dev0) (6.0.1)
09:59:46 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.25.1.dev0) (3.6.5)
09:59:46 Requirement already satisfied: requests in ./.venv3/lib/python3.9/site-packages (from omero-py>=5.19.0->omero-web==5.25.1.dev0) (2.31.0)
09:59:46 Collecting typing-extensions>=4 (from asgiref<4,>=3.6.0->Django<4.3,>=4.2.3->omero-web==5.25.1.dev0)
09:59:46 Using cached typing_extensions-4.10.0-py3-none-any.whl.metadata (3.0 kB)
09:59:46 Requirement already satisfied: charset-normalizer<4,>=2 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.19.0->omero-web==5.25.1.dev0) (3.3.2)
09:59:46 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.19.0->omero-web==5.25.1.dev0) (3.6)
09:59:46 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib/python3.9/site-packages (from requests->omero-py>=5.19.0->omero-web==5.25.1.dev0) (2024.2.2)
09:59:46 Using cached django_cors_headers-3.7.0-py3-none-any.whl (12 kB)
09:59:46 Using cached django_pipeline-2.1.0-py3-none-any.whl (38 kB)
09:59:46 Using cached concurrent_log_handler-0.9.25-py3-none-any.whl (25 kB)
09:59:46 Using cached Django-4.2.11-py3-none-any.whl (8.0 MB)
09:59:46 Using cached gunicorn-21.2.0-py3-none-any.whl (80 kB)
09:59:46 Using cached whitenoise-6.6.0-py3-none-any.whl (19 kB)
09:59:46 Using cached django_csp-3.8-py3-none-any.whl (17 kB)
09:59:46 Using cached asgiref-3.8.0-py3-none-any.whl (23 kB)
09:59:46 Using cached sqlparse-0.4.4-py3-none-any.whl (41 kB)
09:59:46 Using cached typing_extensions-4.10.0-py3-none-any.whl (33 kB)
09:59:46 Building wheels for collected packages: omero-web
09:59:46 Building wheel for omero-web (pyproject.toml): started
09:59:48 Building wheel for omero-web (pyproject.toml): finished with status 'done'
09:59:48 Created wheel for omero-web: filename=omero_web-5.25.1.dev0-py3-none-any.whl size=2769960 sha256=bf3120a1c5a5a8fc26a96a8ec2007dcad655ecbc8c0be6fc67631a4bdde64637
09:59:48 Stored in directory: /home/omero/.cache/pip/wheels/c5/4f/aa/011f4ecfdcda915571d213b068a736fbddf1b36b2e590de11a
09:59:48 Successfully built omero-web
09:59:48 Installing collected packages: django-pipeline, whitenoise, typing-extensions, sqlparse, gunicorn, concurrent-log-handler, asgiref, Django, django-csp, django-cors-headers, omero-web
09:59:51 Successfully installed Django-4.2.11 asgiref-3.8.0 concurrent-log-handler-0.9.25 django-cors-headers-3.7.0 django-csp-3.8 django-pipeline-2.1.0 gunicorn-21.2.0 omero-web-5.25.1.dev0 sqlparse-0.4.4 typing-extensions-4.10.0 whitenoise-6.6.0
09:59:51 + wget https://raw.githubusercontent.com/snoopycrimecop/omero-figure/merge_ci/omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
09:59:51 --2024-03-22 09:59:51-- https://raw.githubusercontent.com/snoopycrimecop/omero-figure/merge_ci/omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
09:59:51 Resolving raw.githubusercontent.com (raw.githubusercontent.com)... 185.199.109.133, 185.199.108.133, 185.199.110.133, ...
09:59:51 Connecting to raw.githubusercontent.com (raw.githubusercontent.com)|185.199.109.133|:443... connected.
09:59:51 HTTP request sent, awaiting response... 200 OK
09:59:51 Length: 94614 (92K) [text/plain]
09:59:51 Saving to: ‘Figure_To_Pdf.py’
09:59:51
09:59:51 0K .......... .......... .......... .......... .......... 54% 3.25M 0s
09:59:51 50K .......... .......... .......... .......... .. 100% 15.0M=0.02s
09:59:51
09:59:51 2024-03-22 09:59:51 (5.07 MB/s) - ‘Figure_To_Pdf.py’ saved [94614/94614]
09:59:51
09:59:51 + chmod 755 Figure_To_Pdf.py
09:59:51 + mv Figure_To_Pdf.py /home/omero/workspace/OMERO-server/OMERO.server/lib/scripts/omero/figure_scripts
09:59:51 + omero config set omero.db.name OMERO-server
09:59:52 + omero config set omero.db.host pg
09:59:54 + omero config set omero.db.user postgres
09:59:55 + omero config set omero.data.dir /home/omero/omero-server-data
09:59:56 + omero config set omero.fs.repo.path %user%_%userId%/%thread%//%year%-%month%/%day%/%time%
09:59:58 + omero config set omero.db.poolsize 25
09:59:59 + omero config set omero.security.trustStore /etc/pki/ca-trust/extracted/java/cacerts
10:00:00 + omero config set omero.security.trustStorePassword changeit
10:00:01 + omero config set omero.mail.config true
10:00:03 + omero config set omero.mail.from qa@openmicroscopy.org.uk
10:00:04 + omero config set omero.mail.host smtp.dundee.ac.uk
10:00:05 + omero certificates
10:00:06 OpenSSL 3.0.7 1 Nov 2022 (Library: OpenSSL 3.0.7 1 Nov 2022)
10:00:07 certificates created: /home/omero/omero-server-data/certs/server.pem /home/omero/omero-server-data/certs/server.p12
10:00:07 + '[' false = true ']'
10:00:07 + echo 'Skipping PURGE_DATA:CleanDbAndRepo. Check for DB upgrade'
10:00:07 Skipping PURGE_DATA:CleanDbAndRepo. Check for DB upgrade
10:00:07 + omego db -vvv upgrade --serverdir /home/omero/workspace/OMERO-server/OMERO.server --dbname OMERO-server
10:00:07 2024-03-22 10:00:07,338 [ omego.db] DEBUG dbcommand => upgrade
10:00:07 2024-03-22 10:00:07,338 [ omego.db] DEBUG dbhost => localhost
10:00:07 2024-03-22 10:00:07,338 [ omego.db] DEBUG dbname => OMERO-server
10:00:07 2024-03-22 10:00:07,338 [ omego.db] DEBUG dbpass => omero
10:00:07 2024-03-22 10:00:07,338 [ omego.db] DEBUG dbuser => omero
10:00:07 2024-03-22 10:00:07,338 [ omego.db] DEBUG rootpass => omero
10:00:07 2024-03-22 10:00:07,338 [ omego.db] DEBUG serverdir => /home/omero/workspace/OMERO-server/OMERO.server
10:00:07 2024-03-22 10:00:07,338 [omego.extern] INFO Executing : omero version
10:00:08 OMERO.py version:
10:00:08 OMERO.server version:
10:00:08 5.6.3-437-b6fa9b6b2b-ice36
10:00:08 5.19.1.dev0
10:00:08 2024-03-22 10:00:08,678 [omego.extern] INFO Completed [1.340 s]
10:00:08 2024-03-22 10:00:08,679 [omego.extern] DEBUG Using omero CLI from omero
10:00:08 2024-03-22 10:00:08,679 [ omego.db] INFO DbAdmin: DbAdmin /home/omero/workspace/OMERO-server/OMERO.server ...
10:00:08 2024-03-22 10:00:08,679 [omego.extern] INFO Running [current environment]: omero config get --show-password
10:00:08 2024-03-22 10:00:08,679 [omego.extern] INFO Executing : omero config get --show-password
10:00:09 2024-03-22 10:00:09,938 [omego.extern] INFO Completed [1.259 s]
10:00:09 2024-03-22 10:00:09,938 [ omego.db] INFO Failed to lookup parameter omero.db.pass, using omero
10:00:09 2024-03-22 10:00:09,939 [omego.extern] INFO Executing [custom environment]: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t --version
10:00:09 2024-03-22 10:00:09,978 [omego.extern] INFO Completed [0.040 s]
10:00:09 2024-03-22 10:00:09,979 [ omego.db] DEBUG stdout: b'psql (PostgreSQL) 16.2\n'
10:00:09 2024-03-22 10:00:09,979 [ omego.db] INFO psql version: psql (PostgreSQL) 16.2
10:00:09
10:00:09 2024-03-22 10:00:09,979 [omego.extern] INFO Running [current environment]: omero config get --show-password
10:00:09 2024-03-22 10:00:09,979 [omego.extern] INFO Executing : omero config get --show-password
10:00:11 2024-03-22 10:00:11,242 [omego.extern] INFO Completed [1.263 s]
10:00:11 2024-03-22 10:00:11,242 [ omego.db] INFO Failed to lookup parameter omero.db.pass, using omero
10:00:11 2024-03-22 10:00:11,242 [omego.extern] INFO Executing [custom environment]: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t -c \conninfo
10:00:11 2024-03-22 10:00:11,263 [omego.extern] INFO Completed [0.021 s]
10:00:11 2024-03-22 10:00:11,263 [ omego.db] DEBUG stdout: b'You are connected to database "OMERO-server" as user "postgres" on host "pg" (address "172.18.0.4") at port "5432".\n'
10:00:11 2024-03-22 10:00:11,263 [ omego.db] DEBUG Executing query: SELECT currentversion, currentpatch FROM dbpatch ORDER BY id DESC LIMIT 1
10:00:11 2024-03-22 10:00:11,263 [omego.extern] INFO Running [current environment]: omero config get --show-password
10:00:11 2024-03-22 10:00:11,263 [omego.extern] INFO Executing : omero config get --show-password
10:00:12 2024-03-22 10:00:12,515 [omego.extern] INFO Completed [1.251 s]
10:00:12 2024-03-22 10:00:12,515 [ omego.db] INFO Failed to lookup parameter omero.db.pass, using omero
10:00:12 2024-03-22 10:00:12,515 [omego.extern] INFO Executing [custom environment]: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t -c SELECT currentversion, currentpatch FROM dbpatch ORDER BY id DESC LIMIT 1
10:00:12 2024-03-22 10:00:12,532 [omego.extern] INFO Completed [0.017 s]
10:00:12 2024-03-22 10:00:12,533 [ omego.db] DEBUG stdout: b'OMERO5.4|0\n'
10:00:12 2024-03-22 10:00:12,533 [ omego.db] INFO Current omero db version: ('OMERO5.4', '0')
10:00:12 2024-03-22 10:00:12,534 [ omego.db] INFO Database is already at OMERO5.4__0
10:00:12 + export LANG=en_US.UTF-8
10:00:12 + LANG=en_US.UTF-8
10:00:12 + export LANGUAGE=en_US:en
10:00:12 + LANGUAGE=en_US:en
10:00:12 + export LC_ALL=en_US.UTF-8
10:00:12 + LC_ALL=en_US.UTF-8
10:00:12 + BUILD_ID=DONT_KILL_ME
10:00:12 + omero admin start
10:00:21 No descriptor given. Using etc/grid/default.xml
10:00:29 Creating /home/omero/workspace/OMERO-server/OMERO.server/var/master
10:00:29 Initializing /home/omero/workspace/OMERO-server/OMERO.server/var/log
10:00:29 Creating /home/omero/workspace/OMERO-server/OMERO.server/var/registry
10:00:29 Waiting on startup. Use CTRL-C to exit
10:00:29 + omero admin waitup
10:00:30 Waiting on startup. Use CTRL-C to exit
10:00:30 + omero admin diagnostics
10:00:31
10:00:31 ================================================================================
10:00:31 OMERO Diagnostics (admin)
10:00:31 ================================================================================
10:00:31
10:00:31 Commands: java -version 11.0.22 (/usr/bin/java)
10:00:32 Commands: python -V 3.9.18 (/home/omero/workspace/OMERO-server/.venv3/bin/python)
10:00:32 Commands: icegridnode --version 3.6.5 (/opt/ice-3.6.5/bin/icegridnode)
10:00:32 Commands: icegridadmin --version 3.6.5 (/opt/ice-3.6.5/bin/icegridadmin)
10:00:32 Commands: psql --version 16.2 (/usr/bin/psql)
10:00:32 Commands: openssl version 3.0.71 (/usr/bin/openssl)
10:00:32
10:00:32 Component: OMERO.py 5.19.1.dev0
10:00:32 Component: OMERO.server 5.6.3-437-b6fa9b6b2b-ice36
10:00:32
10:00:32 Server: icegridnode running
10:00:32 Server: Blitz-0 active (pid = 237319, enabled)
10:00:32 Server: DropBox activating (enabled)
10:00:32 Server: FileServer active (pid = 237355, enabled)
10:00:32 Server: Indexer-0 activating (enabled)
10:00:32 Server: MonitorServer active (pid = 237364, enabled)
10:00:32 Server: OMERO.Glacier2 active (pid = 237356, enabled)
10:00:32 Server: OMERO.IceStorm active (pid = 237383, enabled)
10:00:32 Server: PixelData-0 activating (enabled)
10:00:32 Server: Processor-0 activating (enabled)
10:00:32 Server: Tables-0 activating (enabled)
10:00:32 Server: TestDropBox inactive (enabled)
10:00:32
10:00:32 Log dir: /home/omero/workspace/OMERO-server/OMERO.server/var/log exists
10:00:32 Log files: Blitz-0.log 21.3 KB errors=0 warnings=1
10:00:32 Log files: DropBox.log 121 B
10:00:32 Log files: FileServer.log 114 B
10:00:32 Log files: Indexer-0.log 114 B
10:00:32 Log files: MonitorServer.log 117 B
10:00:32 Log files: PixelData-0.log 114 B
10:00:32 Log files: Processor-0.log 281 B
10:00:32 Log files: Tables-0.log 281 B
10:00:32 Log files: TestDropBox.log n/a
10:00:32 Log files: master.err 869 B
10:00:32 Log files: master.out 41.5 KB
10:00:32 Log files: Total size 0.06 MB
10:00:32
10:00:32
10:00:32 Environment:OMERO_HOME=(unset)
10:00:32 Environment:OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
10:00:32 Environment:OMERO_NODE=(unset)
10:00:32 Environment:OMERO_MASTER=(unset)
10:00:32 Environment:OMERO_USERDIR=(unset)
10:00:32 Environment:OMERO_TMPDIR=(unset)
10:00:32 Environment:PATH=/home/omero/workspace/OMERO-server/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
10:00:32 Environment:PYTHONPATH=(unset)
10:00:32 Environment:ICE_HOME=/opt/ice-3.6.5
10:00:32 Environment:LD_LIBRARY_PATH=(unset)
10:00:32 Environment:DYLD_LIBRARY_PATH=(unset)
10:00:32
10:00:32 OMERO SSL port:4064
10:00:32 OMERO TCP port:4063
10:00:32 OMERO data dir:'/home/omero/omero-server-data' Exists? True Is writable? True
10:00:32 OMERO temp dir:'/home/omero/omero/tmp' Exists? True Is writable? True (Size: 0)
10:00:32
10:00:32 JVM settings: Blitz-${index} -Xmx7200m -XX:MaxPermSize=1g -XX:+IgnoreUnrecognizedVMOptions
10:00:32 JVM settings: Indexer-${index} -Xmx4800m -XX:MaxPermSize=1g -XX:+IgnoreUnrecognizedVMOptions
10:00:32 JVM settings: PixelData-${index} -Xmx7200m -XX:MaxPermSize=1g -XX:+IgnoreUnrecognizedVMOptions
10:00:32 JVM settings: Repository-${index} -Xmx4800m -XX:MaxPermSize=1g -XX:+IgnoreUnrecognizedVMOptions
10:00:32
10:00:32 Jar: lib/server/formats-api.jar Bio-Formats API 8.0.0-SNAPSHOT 22 March 2024 8b895971f4a9f3726b9358af6e45333dff8bd9bf
10:00:32 Jar: lib/server/formats-bsd.jar BSD Bio-Formats readers and writers 8.0.0-SNAPSHOT 22 March 2024 8b895971f4a9f3726b9358af6e45333dff8bd9bf
10:00:32 Jar: lib/server/formats-gpl.jar Bio-Formats library 8.0.0-SNAPSHOT 22 March 2024 8b895971f4a9f3726b9358af6e45333dff8bd9bf
10:00:32 Jar: lib/server/ome-codecs.jar OME Codecs 1.0.2-SNAPSHOT 22 March 2024 acddcc03c544c4e11d96f5e65770a28447a663a3
10:00:32 Jar: lib/server/ome-common.jar OME Common Java 6.0.22-SNAPSHOT 22 March 2024 acddcc03c544c4e11d96f5e65770a28447a663a3
10:00:32 Jar: lib/server/ome-jai.jar OME JAI 0.1.3-SNAPSHOT 22 March 2024 acddcc03c544c4e11d96f5e65770a28447a663a3
10:00:32 Jar: lib/server/ome-mdbtools.jar MDB Tools (Java port) 5.3.3-SNAPSHOT 22 March 2024 acddcc03c544c4e11d96f5e65770a28447a663a3
10:00:32 Jar: lib/server/ome-poi.jar OME POI 5.3.9-SNAPSHOT 22 March 2024 acddcc03c544c4e11d96f5e65770a28447a663a3
10:00:32 Jar: lib/server/ome-xml.jar OME XML library 6.3.5-SNAPSHOT 22 March 2024 acddcc03c544c4e11d96f5e65770a28447a663a3
10:00:32 Jar: lib/server/omero-blitz.jar jar 5.7.3-SNAPSHOT
10:00:32 Jar: lib/server/omero-common.jar jar 5.6.5-SNAPSHOT
10:00:32 Jar: lib/server/omero-gateway.jar jar 5.9.1-SNAPSHOT
10:00:32 Jar: lib/server/omero-model.jar jar 5.6.14-SNAPSHOT
10:00:32 Jar: lib/server/omero-renderer.jar jar 5.5.16-SNAPSHOT
10:00:32 Jar: lib/server/omero-romio.jar jar 5.7.6-SNAPSHOT
10:00:32 Jar: lib/server/omero-server.jar jar 5.6.11-SNAPSHOT
10:00:32 + deactivate
10:00:32 + '[' -n /opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
10:00:32 + PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
10:00:32 + export PATH
10:00:32 + unset _OLD_VIRTUAL_PATH
10:00:32 + '[' -n '' ']'
10:00:32 + '[' -n /bin/bash -o -n '' ']'
10:00:32 + hash -r
10:00:32 + '[' -n '' ']'
10:00:32 + unset VIRTUAL_ENV
10:00:32 + '[' '!' '' = nondestructive ']'
10:00:32 + unset -f deactivate
10:00:32 Finished: SUCCESS
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