Console

14:24:43 Started by user devspace
14:24:43 Running as SYSTEM
14:24:43 Building remotely on omero (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-server
14:24:43 [OMERO-server] $ /bin/bash -xe /tmp/jenkins8381547197650418628.sh
14:24:43 + source /home/settings.env
14:24:43 ++ OMERO_DB_HOST=pg
14:24:43 ++ OMERO_DB_USER=postgres
14:24:43 ++ OMERO_DB_PASS=
14:24:43 ++ OMERO_ROOT_PASS=omero
14:24:43 ++ OMERO_DATA_DIR=/OMERO
14:24:43 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
14:24:43 + OMERO_DB_NAME=OMERO-server
14:24:43 + OMERO_DIST=/home/omero/workspace/OMERO-server/OMERO.server
14:24:43 + export OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
14:24:43 + OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
14:24:43 + OMERO_DATA_DIR=/home/omero/omero-server-data
14:24:43 + '[' -e /home/omero/workspace/OMERO-server/OMERO.server ']'
14:24:43 + source /home/omero/workspace/OMERO-server/.venv3/bin/activate
14:24:43 ++ deactivate nondestructive
14:24:43 ++ '[' -n '' ']'
14:24:43 ++ '[' -n '' ']'
14:24:43 ++ hash -r
14:24:43 ++ '[' -n '' ']'
14:24:43 ++ unset VIRTUAL_ENV
14:24:43 ++ unset VIRTUAL_ENV_PROMPT
14:24:43 ++ '[' '!' nondestructive = nondestructive ']'
14:24:43 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-server/.venv3
14:24:43 ++ export VIRTUAL_ENV
14:24:43 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
14:24:43 ++ PATH=/home/omero/workspace/OMERO-server/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
14:24:43 ++ export PATH
14:24:43 ++ '[' -n '' ']'
14:24:43 ++ '[' -z '' ']'
14:24:43 ++ _OLD_VIRTUAL_PS1=
14:24:43 ++ PS1='(.venv3) '
14:24:43 ++ export PS1
14:24:43 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
14:24:43 ++ export VIRTUAL_ENV_PROMPT
14:24:43 ++ hash -r
14:24:43 + omero admin stop
14:24:43 /tmp/jenkins8381547197650418628.sh: line 10: omero: command not found
14:24:43 + echo not running
14:24:43 not running
14:24:43 + sleep 5
14:24:48 + deactivate
14:24:48 + '[' -n /opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
14:24:48 + PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
14:24:48 + export PATH
14:24:48 + unset _OLD_VIRTUAL_PATH
14:24:48 + '[' -n '' ']'
14:24:48 + hash -r
14:24:48 + '[' -n '' ']'
14:24:48 + unset VIRTUAL_ENV
14:24:48 + unset VIRTUAL_ENV_PROMPT
14:24:48 + '[' '!' '' = nondestructive ']'
14:24:48 + unset -f deactivate
14:24:48 + rm -rf /home/omero/workspace/OMERO-server/.venv3
14:24:53 + python3.11 -m venv /home/omero/workspace/OMERO-server/.venv3
14:25:12 + '[' false = true ']'
14:25:12 + echo 'Skipping PURGE_DATA:CleanDbAndRepo'
14:25:12 Skipping PURGE_DATA:CleanDbAndRepo
14:25:12 + rm -rf /home/omero/workspace/OMERO-server/omero-blitz-5.8.6-SNAPSHOT-python.zip /home/omero/workspace/OMERO-server/omero_dropbox-5.7.1.dev0.tar.gz /home/omero/workspace/OMERO-server/omero_marshal-0.9.2.dev0.tar.gz /home/omero/workspace/OMERO-server/omero_py-5.22.2.dev0.tar.gz /home/omero/workspace/OMERO-server/omero_scripts-5.10.1.dev0.tar.gz /home/omero/workspace/OMERO-server/OMERO.server /home/omero/workspace/OMERO-server/omero_web-5.32.1.dev0.tar.gz /home/omero/workspace/OMERO-server/version.properties
14:25:17 Copied 1 artifact from "OMERO-build" build number 2
14:25:17 Copied 5 artifacts from "OMERO-python-superbuild-build" build number 1
14:25:17 Copied 2 artifacts from "OMERO-build-build" build number 9
14:25:17 [OMERO-server] $ /bin/bash -xe /tmp/jenkins4747938028931349368.sh
14:25:17 + source /home/settings.env
14:25:17 ++ OMERO_DB_HOST=pg
14:25:17 ++ OMERO_DB_USER=postgres
14:25:17 ++ OMERO_DB_PASS=
14:25:17 ++ OMERO_ROOT_PASS=omero
14:25:17 ++ OMERO_DATA_DIR=/OMERO
14:25:17 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
14:25:17 + OMERO_DB_NAME=OMERO-server
14:25:17 + OMERO_DATA_DIR=/home/omero/omero-server-data
14:25:17 + mkdir -p /home/omero/omero-server-data
14:25:17 + OMERO_DIST=/home/omero/workspace/OMERO-server/OMERO.server
14:25:17 + export OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
14:25:17 + OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server
14:25:17 + export ZIP_FILE=/home/omero/workspace/OMERO-server/omero-blitz-VERSION-python.zip
14:25:17 + ZIP_FILE=/home/omero/workspace/OMERO-server/omero-blitz-VERSION-python.zip
14:25:17 + export VERSION_PROPERTIES=/home/omero/workspace/OMERO-server/version.properties
14:25:17 + VERSION_PROPERTIES=/home/omero/workspace/OMERO-server/version.properties
14:25:17 ++ ls OMERO.server-5.6.3-614-b7d1771417-ice36-b2.zip
14:25:17 + ZIP=OMERO.server-5.6.3-614-b7d1771417-ice36-b2.zip
14:25:17 + '[' '!' -z '' ']'
14:25:17 + DIST=OMERO.server-5.6.3-614-b7d1771417-ice36-b2
14:25:17 + unzip OMERO.server-5.6.3-614-b7d1771417-ice36-b2.zip
14:25:17 Archive:  OMERO.server-5.6.3-614-b7d1771417-ice36-b2.zip
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/etc/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/etc/blitz/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/etc/grid/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/etc/profiles/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/etc/templates/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/etc/templates/error/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/etc/templates/grid/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/client/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/scripts/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/scripts/luts/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/scripts/luts/janelia/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/scripts/luts/matplotlib/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/scripts/luts/ncsa_paledit/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/scripts/luts/seaborn/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/scripts/luts/wcif/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/scripts/omero/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/scripts/omero/analysis_scripts/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/scripts/omero/annotation_scripts/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/scripts/omero/export_scripts/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/scripts/omero/figure_scripts/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/scripts/omero/import_scripts/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/scripts/omero/util_scripts/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/server/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/share/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/share/licenses/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/misc/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO3A__1/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO3A__10/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO3A__11/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO3A__2/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO3A__3/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO3A__4/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO3A__5/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO3A__6/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO3A__7/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO3A__8/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO3A__9/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO3__4/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO3__5/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO3__6/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO3__7/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO4.1__0/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO4.2__0/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO4.2__0/t/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO4.3__0/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO4.4__0/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO4__0/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO5.0__0/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO5.1__1/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO5.2__0/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO5.3__0/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO5.4DEV__1/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO5.4DEV__2/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO5.4DEV__3/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO5.4__0/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/var/
14:25:17    creating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/var/tmp/
14:25:17   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/LICENSE.txt  
14:25:17   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/etc/backup.cfg  
14:25:17   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/etc/blitz/mail-senders.example  
14:25:17   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/etc/blitz/mail-server.example  
14:25:17   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/etc/build.properties  
14:25:17   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/etc/env.bat  
14:25:17   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/etc/env.sh  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/etc/hibernate.properties  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/etc/ice.config  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/etc/logback-cli.xml  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/etc/logback-indexing-cli.xml  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/etc/logback-indexing.xml  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/etc/logback.xml  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/etc/mime.types  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/etc/node1.cfg  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/etc/node2.cfg  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/etc/omero.properties  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/etc/profiles/psql  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/etc/rollover.cfg  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/etc/templates/Windows.cfg  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/etc/templates/error/maintainance.html  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/etc/templates/grid/README  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/etc/templates/grid/default.xml  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/etc/templates/grid/templates.xml  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/etc/templates/grid/windefault.xml  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/etc/templates/ice.config  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/etc/templates/internal.cfg  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/etc/templates/master.cfg  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/etc/templates/robot.template  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/etc/testdropbox.config  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/history.rst  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/client/OMEZarrReader.jar  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/client/accessors-smart.jar  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/client/activation.jar  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/client/aggdesigner-algorithm.jar  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/client/aircompressor.jar  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/client/antlr.jar  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/client/aopalliance.jar  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/client/apiguardian-api.jar  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/client/asm.jar  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/client/avatica-core.jar  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/client/avatica-metrics.jar  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/client/aws-java-sdk-core.jar  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/client/aws-java-sdk-kms.jar  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/client/aws-java-sdk-s3.jar  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/client/base.jar  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/client/batik-anim.jar  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/client/batik-awt-util.jar  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/client/batik-bridge.jar  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/client/batik-codec.jar  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/client/batik-constants.jar  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/client/batik-css.jar  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/client/batik-dom.jar  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/client/batik-ext.jar  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/client/batik-gvt.jar  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/client/batik-i18n.jar  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/client/batik-parser.jar  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/client/batik-script.jar  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/client/batik-shared-resources.jar  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/client/batik-svg-dom.jar  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/client/batik-svggen.jar  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/client/batik-transcoder.jar  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/client/batik-util.jar  
14:25:18   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/lib/client/batik-xml.jar  
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14:25:30   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO4.2__0/t/OMERO4.1__0.test  
14:25:30   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO4.3__0/OMERO4.2__0.sql  
14:25:30   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO4.3__0/omero-4.2-data-fix.sql  
14:25:30   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO4.4__0/OMERO4.1__0.sql  
14:25:30   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO4.4__0/OMERO4.3__0.sql  
14:25:30   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO4__0/OMERO3A__11.sql  
14:25:30   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-fix.sql  
14:25:30   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-list.sql  
14:25:30   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO5.0__0/OMERO4.4__0.sql  
14:25:30   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO5.1__1/OMERO5.0__0.sql  
14:25:30   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO5.1__1/OMERO5.1-delete-and-disable-shares.sql  
14:25:30   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO5.1__1/OMERO5.1-enable-shares.sql  
14:25:30   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO5.1__1/OMERO5.1__0.sql  
14:25:30   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO5.2__0/OMERO5.1__1.sql  
14:25:30   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO5.2__0/OMERO5.2-delete-and-disable-shares.sql  
14:25:30   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO5.2__0/OMERO5.2-enable-shares.sql  
14:25:30   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO5.3__0/OMERO5.2__0-precheck.sql  
14:25:30   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO5.3__0/OMERO5.2__0.sql  
14:25:30   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO5.3__0/OMERO5.3-index-files.sql  
14:25:30   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO5.3__0/delete-ns-orphans.sql  
14:25:30   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO5.3__0/reverse_shape_color_argb_to_rgba.sql  
14:25:30   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO5.3__0/shape_color_argb_to_rgba.sql  
14:25:30   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO5.4DEV__1/OMERO5.4DEV__0.sql  
14:25:30   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO5.4DEV__2/OMERO5.4DEV__1.sql  
14:25:30   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO5.4DEV__3/OMERO5.4DEV__2.sql  
14:25:30   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO5.4__0/OMERO5.3__0-precheck.sql  
14:25:30   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO5.4__0/OMERO5.3__0.sql  
14:25:30   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO5.4__0/OMERO5.3__1-precheck.sql  
14:25:30   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO5.4__0/OMERO5.3__1.sql  
14:25:30   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO5.4__0/OMERO5.4DEV__3.sql  
14:25:30   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO5.4__0/allow-guest-user-without-password.sql  
14:25:30   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO5.4__0/psql-footer.sql  
14:25:30   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO5.4__0/psql-header.sql  
14:25:30   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO5.4__0/schema.sql  
14:25:30   inflating: OMERO.server-5.6.3-614-b7d1771417-ice36-b2/sql/psql/OMERO5.4__0/views.sql  
14:25:31 + rm -f OMERO.server-5.6.3-614-b7d1771417-ice36-b2.zip
14:25:31 + mv /home/omero/workspace/OMERO-server/OMERO.server-5.6.3-614-b7d1771417-ice36-b2 /home/omero/workspace/OMERO-server/OMERO.server
14:25:31 + source /home/omero/workspace/OMERO-server/.venv3/bin/activate
14:25:31 ++ deactivate nondestructive
14:25:31 ++ '[' -n '' ']'
14:25:31 ++ '[' -n '' ']'
14:25:31 ++ hash -r
14:25:31 ++ '[' -n '' ']'
14:25:31 ++ unset VIRTUAL_ENV
14:25:31 ++ unset VIRTUAL_ENV_PROMPT
14:25:31 ++ '[' '!' nondestructive = nondestructive ']'
14:25:31 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-server/.venv3
14:25:31 ++ export VIRTUAL_ENV
14:25:31 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
14:25:31 ++ PATH=/home/omero/workspace/OMERO-server/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
14:25:31 ++ export PATH
14:25:31 ++ '[' -n '' ']'
14:25:31 ++ '[' -z '' ']'
14:25:31 ++ _OLD_VIRTUAL_PS1=
14:25:31 ++ PS1='(.venv3) '
14:25:31 ++ export PS1
14:25:31 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
14:25:31 ++ export VIRTUAL_ENV_PROMPT
14:25:31 ++ hash -r
14:25:31 + pip install -U pip
14:25:32 Requirement already satisfied: pip in ./.venv3/lib64/python3.11/site-packages (22.3.1)
14:25:32 Collecting pip
14:25:32   Using cached pip-26.1.2-py3-none-any.whl (1.8 MB)
14:25:32 Installing collected packages: pip
14:25:32   Attempting uninstall: pip
14:25:32     Found existing installation: pip 22.3.1
14:25:33     Uninstalling pip-22.3.1:
14:25:34       Successfully uninstalled pip-22.3.1
14:25:47 Successfully installed pip-26.1.2
14:25:47 + pip install https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl
14:25:48 Collecting zeroc-ice==3.6.5
14:25:49   Downloading zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl (37.3 MB)
14:25:51      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 37.3/37.3 MB 19.8 MB/s  0:00:01
14:25:51 Installing collected packages: zeroc-ice
14:25:54 Successfully installed zeroc-ice-3.6.5
14:25:54 + pip install markdown
14:25:55 Collecting markdown
14:25:55   Using cached markdown-3.10.2-py3-none-any.whl.metadata (5.1 kB)
14:25:55 Using cached markdown-3.10.2-py3-none-any.whl (108 kB)
14:25:55 Installing collected packages: markdown
14:25:56 Successfully installed markdown-3.10.2
14:25:56 + pip install reportlab
14:25:57 Collecting reportlab
14:25:57   Using cached reportlab-5.0.0-py3-none-any.whl.metadata (1.6 kB)
14:25:57 Collecting pillow>=9.0.0 (from reportlab)
14:25:57   Using cached pillow-12.3.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (9.1 kB)
14:25:57 Collecting charset-normalizer (from reportlab)
14:25:57   Using cached charset_normalizer-3.4.7-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (40 kB)
14:25:57 Using cached reportlab-5.0.0-py3-none-any.whl (2.0 MB)
14:25:58 Using cached pillow-12.3.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (6.9 MB)
14:25:58 Using cached charset_normalizer-3.4.7-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (214 kB)
14:25:58 Installing collected packages: pillow, charset-normalizer, reportlab
14:26:06 
14:26:06 Successfully installed charset-normalizer-3.4.7 pillow-12.3.0 reportlab-5.0.0
14:26:06 + pip install omego
14:26:07 Collecting omego
14:26:07   Using cached omego-0.8.0-py3-none-any.whl.metadata (1.9 kB)
14:26:07 Collecting future (from omego)
14:26:07   Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
14:26:07 Collecting yaclifw>=0.1.1 (from omego)
14:26:07   Using cached yaclifw-0.2.0-py3-none-any.whl
14:26:07 Collecting six (from yaclifw>=0.1.1->omego)
14:26:07   Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB)
14:26:07 Using cached omego-0.8.0-py3-none-any.whl (41 kB)
14:26:07 Using cached future-1.0.0-py3-none-any.whl (491 kB)
14:26:07 Using cached six-1.17.0-py2.py3-none-any.whl (11 kB)
14:26:07 Installing collected packages: six, future, yaclifw, omego
14:26:12 
14:26:12 Successfully installed future-1.0.0 omego-0.8.0 six-1.17.0 yaclifw-0.2.0
14:26:12 + pip install tables
14:26:13 Collecting tables
14:26:13   Using cached tables-3.11.1-cp311-abi3-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.1 kB)
14:26:13 Collecting numpy>=1.20.0 (from tables)
14:26:13   Using cached numpy-2.4.6-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (6.6 kB)
14:26:14 Collecting numexpr>=2.6.2 (from tables)
14:26:14   Using cached numexpr-2.14.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (9.0 kB)
14:26:14 Collecting packaging (from tables)
14:26:14   Using cached packaging-26.2-py3-none-any.whl.metadata (3.5 kB)
14:26:14 Collecting py-cpuinfo (from tables)
14:26:14   Using cached py_cpuinfo-9.0.0-py3-none-any.whl.metadata (794 bytes)
14:26:14 Collecting blosc2>=2.3.0 (from tables)
14:26:14   Using cached blosc2-4.7.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (7.8 kB)
14:26:14 Collecting ndindex (from blosc2>=2.3.0->tables)
14:26:14   Using cached ndindex-1.10.1-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl.metadata (3.6 kB)
14:26:14 Collecting msgpack (from blosc2>=2.3.0->tables)
14:26:14   Using cached msgpack-1.2.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (8.3 kB)
14:26:14 Collecting pydantic (from blosc2>=2.3.0->tables)
14:26:14   Using cached pydantic-2.13.4-py3-none-any.whl.metadata (109 kB)
14:26:14 Collecting requests (from blosc2>=2.3.0->tables)
14:26:14   Using cached requests-2.34.2-py3-none-any.whl.metadata (4.8 kB)
14:26:14 Collecting rich (from blosc2>=2.3.0->tables)
14:26:14   Using cached rich-15.0.0-py3-none-any.whl.metadata (18 kB)
14:26:14 Collecting threadpoolctl (from blosc2>=2.3.0->tables)
14:26:14   Using cached threadpoolctl-3.6.0-py3-none-any.whl.metadata (13 kB)
14:26:14 Collecting annotated-types>=0.6.0 (from pydantic->blosc2>=2.3.0->tables)
14:26:14   Using cached annotated_types-0.7.0-py3-none-any.whl.metadata (15 kB)
14:26:15 Collecting pydantic-core==2.46.4 (from pydantic->blosc2>=2.3.0->tables)
14:26:15   Using cached pydantic_core-2.46.4-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB)
14:26:15 Collecting typing-extensions>=4.14.1 (from pydantic->blosc2>=2.3.0->tables)
14:26:15   Using cached typing_extensions-4.16.0-py3-none-any.whl.metadata (3.3 kB)
14:26:15 Collecting typing-inspection>=0.4.2 (from pydantic->blosc2>=2.3.0->tables)
14:26:15   Using cached typing_inspection-0.4.2-py3-none-any.whl.metadata (2.6 kB)
14:26:15 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->blosc2>=2.3.0->tables) (3.4.7)
14:26:15 Collecting idna<4,>=2.5 (from requests->blosc2>=2.3.0->tables)
14:26:15   Using cached idna-3.18-py3-none-any.whl.metadata (6.1 kB)
14:26:15 Collecting urllib3<3,>=1.26 (from requests->blosc2>=2.3.0->tables)
14:26:15   Using cached urllib3-2.7.0-py3-none-any.whl.metadata (6.9 kB)
14:26:15 Collecting certifi>=2023.5.7 (from requests->blosc2>=2.3.0->tables)
14:26:15   Using cached certifi-2026.6.17-py3-none-any.whl.metadata (2.5 kB)
14:26:15 Collecting markdown-it-py>=2.2.0 (from rich->blosc2>=2.3.0->tables)
14:26:15   Using cached markdown_it_py-4.2.0-py3-none-any.whl.metadata (7.4 kB)
14:26:16 Collecting pygments<3.0.0,>=2.13.0 (from rich->blosc2>=2.3.0->tables)
14:26:16   Using cached pygments-2.20.0-py3-none-any.whl.metadata (2.5 kB)
14:26:16 Collecting mdurl~=0.1 (from markdown-it-py>=2.2.0->rich->blosc2>=2.3.0->tables)
14:26:16   Using cached mdurl-0.1.2-py3-none-any.whl.metadata (1.6 kB)
14:26:16 Using cached tables-3.11.1-cp311-abi3-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (7.2 MB)
14:26:16 Using cached blosc2-4.7.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (6.8 MB)
14:26:16 Using cached numexpr-2.14.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (442 kB)
14:26:16 Using cached numpy-2.4.6-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (16.9 MB)
14:26:16 Using cached msgpack-1.2.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (423 kB)
14:26:16 Using cached ndindex-1.10.1-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl (516 kB)
14:26:16 Using cached packaging-26.2-py3-none-any.whl (100 kB)
14:26:16 Using cached py_cpuinfo-9.0.0-py3-none-any.whl (22 kB)
14:26:16 Using cached pydantic-2.13.4-py3-none-any.whl (472 kB)
14:26:16 Using cached pydantic_core-2.46.4-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (2.1 MB)
14:26:16 Using cached annotated_types-0.7.0-py3-none-any.whl (13 kB)
14:26:16 Using cached typing_extensions-4.16.0-py3-none-any.whl (45 kB)
14:26:16 Using cached typing_inspection-0.4.2-py3-none-any.whl (14 kB)
14:26:16 Using cached requests-2.34.2-py3-none-any.whl (73 kB)
14:26:16 Using cached idna-3.18-py3-none-any.whl (65 kB)
14:26:16 Using cached urllib3-2.7.0-py3-none-any.whl (131 kB)
14:26:16 Using cached certifi-2026.6.17-py3-none-any.whl (133 kB)
14:26:16 Using cached rich-15.0.0-py3-none-any.whl (310 kB)
14:26:16 Using cached pygments-2.20.0-py3-none-any.whl (1.2 MB)
14:26:16 Using cached markdown_it_py-4.2.0-py3-none-any.whl (91 kB)
14:26:16 Using cached mdurl-0.1.2-py3-none-any.whl (10.0 kB)
14:26:16 Using cached threadpoolctl-3.6.0-py3-none-any.whl (18 kB)
14:26:16 Installing collected packages: py-cpuinfo, urllib3, typing-extensions, threadpoolctl, pygments, packaging, numpy, ndindex, msgpack, mdurl, idna, certifi, annotated-types, typing-inspection, requests, pydantic-core, numexpr, markdown-it-py, rich, pydantic, blosc2, tables
14:27:08 
14:27:08 Successfully installed annotated-types-0.7.0 blosc2-4.7.0 certifi-2026.6.17 idna-3.18 markdown-it-py-4.2.0 mdurl-0.1.2 msgpack-1.2.1 ndindex-1.10.1 numexpr-2.14.1 numpy-2.4.6 packaging-26.2 py-cpuinfo-9.0.0 pydantic-2.13.4 pydantic-core-2.46.4 pygments-2.20.0 requests-2.34.2 rich-15.0.0 tables-3.11.1 threadpoolctl-3.6.0 typing-extensions-4.16.0 typing-inspection-0.4.2 urllib3-2.7.0
14:27:08 + pip install jinja2
14:27:09 Collecting jinja2
14:27:09   Using cached jinja2-3.1.6-py3-none-any.whl.metadata (2.9 kB)
14:27:09 Collecting MarkupSafe>=2.0 (from jinja2)
14:27:09   Using cached markupsafe-3.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.7 kB)
14:27:09 Using cached jinja2-3.1.6-py3-none-any.whl (134 kB)
14:27:09 Using cached markupsafe-3.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (22 kB)
14:27:10 Installing collected packages: MarkupSafe, jinja2
14:27:11 
14:27:11 Successfully installed MarkupSafe-3.0.3 jinja2-3.1.6
14:27:11 + pip install omero-py
14:27:12 Collecting omero-py
14:27:12   Using cached omero_py-5.22.1-py3-none-any.whl.metadata (6.5 kB)
14:27:12 Collecting appdirs (from omero-py)
14:27:12   Using cached appdirs-1.4.4-py2.py3-none-any.whl.metadata (9.0 kB)
14:27:12 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py) (1.0.0)
14:27:12 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py) (2.4.6)
14:27:12 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py) (12.3.0)
14:27:12 Collecting PyYAML (from omero-py)
14:27:12   Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB)
14:27:12 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py) (3.6.5)
14:27:12 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py) (2.34.2)
14:27:12 Collecting portalocker (from omero-py)
14:27:12   Using cached portalocker-3.2.0-py3-none-any.whl.metadata (8.7 kB)
14:27:12 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py) (3.4.7)
14:27:12 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py) (3.18)
14:27:12 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py) (2.7.0)
14:27:12 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py) (2026.6.17)
14:27:12 Using cached omero_py-5.22.1-py3-none-any.whl (2.8 MB)
14:27:12 Using cached appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB)
14:27:12 Using cached portalocker-3.2.0-py3-none-any.whl (22 kB)
14:27:12 Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB)
14:27:12 Installing collected packages: appdirs, PyYAML, portalocker, omero-py
14:27:29 
14:27:29 Successfully installed PyYAML-6.0.3 appdirs-1.4.4 omero-py-5.22.1 portalocker-3.2.0
14:27:29 + pip install git+https://github.com/snoopycrimecop/omero-metadata.git@merge_ci#egg=omero-metadata
14:27:30 Collecting omero-metadata
14:27:30   Cloning https://github.com/snoopycrimecop/omero-metadata.git (to revision merge_ci) to /tmp/pip-install-wb1wk1yb/omero-metadata_f31d4c114bea4abeb0053382f778b6c1
14:27:30   Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-metadata.git /tmp/pip-install-wb1wk1yb/omero-metadata_f31d4c114bea4abeb0053382f778b6c1
14:27:31   Resolved https://github.com/snoopycrimecop/omero-metadata.git to commit 9588d7e4152c26ee74bcd4ccb828a95185c32a7b
14:27:31   Installing build dependencies: started
14:27:32   Installing build dependencies: finished with status 'done'
14:27:32   Getting requirements to build wheel: started
14:27:32   Getting requirements to build wheel: finished with status 'done'
14:27:32   Preparing metadata (pyproject.toml): started
14:27:33   Preparing metadata (pyproject.toml): finished with status 'done'
14:27:33 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-metadata) (5.22.1)
14:27:33 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-metadata) (6.0.3)
14:27:33 Requirement already satisfied: jinja2 in ./.venv3/lib64/python3.11/site-packages (from omero-metadata) (3.1.6)
14:27:33 Collecting pandas (from omero-metadata)
14:27:33   Using cached pandas-3.0.3-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl.metadata (79 kB)
14:27:33 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (1.4.4)
14:27:33 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (1.0.0)
14:27:33 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (2.4.6)
14:27:33 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (12.3.0)
14:27:33 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (3.6.5)
14:27:33 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (2.34.2)
14:27:33 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-metadata) (3.2.0)
14:27:33 Requirement already satisfied: MarkupSafe>=2.0 in ./.venv3/lib64/python3.11/site-packages (from jinja2->omero-metadata) (3.0.3)
14:27:33 Collecting python-dateutil>=2.8.2 (from pandas->omero-metadata)
14:27:33   Using cached python_dateutil-2.9.0.post0-py2.py3-none-any.whl.metadata (8.4 kB)
14:27:33 Requirement already satisfied: six>=1.5 in ./.venv3/lib64/python3.11/site-packages (from python-dateutil>=2.8.2->pandas->omero-metadata) (1.17.0)
14:27:33 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (3.4.7)
14:27:33 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (3.18)
14:27:33 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (2.7.0)
14:27:33 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-metadata) (2026.6.17)
14:27:33 Using cached pandas-3.0.3-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl (11.3 MB)
14:27:33 Using cached python_dateutil-2.9.0.post0-py2.py3-none-any.whl (229 kB)
14:27:33 Building wheels for collected packages: omero-metadata
14:27:33   Building wheel for omero-metadata (pyproject.toml): started
14:27:33   Building wheel for omero-metadata (pyproject.toml): finished with status 'done'
14:27:33   Created wheel for omero-metadata: filename=omero_metadata-0.13.1.dev0-py3-none-any.whl size=39373 sha256=06f7f1337fbf42932e7ca4526a403e73ed6dbb82a9239312ca6410db5dc18037
14:27:33   Stored in directory: /tmp/pip-ephem-wheel-cache-1cbsqftb/wheels/6b/49/26/d56ff0fc3b918823c05ff86cc0686c3a577289ddc39151269b
14:27:33 Successfully built omero-metadata
14:27:33 Installing collected packages: python-dateutil, pandas, omero-metadata
14:28:13 
14:28:13 Successfully installed omero-metadata-0.13.1.dev0 pandas-3.0.3 python-dateutil-2.9.0.post0
14:28:13 + pip install git+https://github.com/snoopycrimecop/omero-cli-render.git@merge_ci#egg=omero-cli-render
14:28:14 Collecting omero-cli-render
14:28:14   Cloning https://github.com/snoopycrimecop/omero-cli-render.git (to revision merge_ci) to /tmp/pip-install-gzn4wttr/omero-cli-render_a9667cd318a84b2186bad2667ddc162b
14:28:14   Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-cli-render.git /tmp/pip-install-gzn4wttr/omero-cli-render_a9667cd318a84b2186bad2667ddc162b
14:28:15   Running command git checkout -b merge_ci --track origin/merge_ci
14:28:15   Switched to a new branch 'merge_ci'
14:28:15   branch 'merge_ci' set up to track 'origin/merge_ci'.
14:28:15   Resolved https://github.com/snoopycrimecop/omero-cli-render.git to commit 23d2d55d97ce42d2a31619c0a0b97e80d9109070
14:28:15   Installing build dependencies: started
14:28:16   Installing build dependencies: finished with status 'done'
14:28:16   Getting requirements to build wheel: started
14:28:17   Getting requirements to build wheel: finished with status 'done'
14:28:17   Preparing metadata (pyproject.toml): started
14:28:17   Preparing metadata (pyproject.toml): finished with status 'done'
14:28:17 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-cli-render) (6.0.3)
14:28:17 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-cli-render) (5.22.1)
14:28:17 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (1.4.4)
14:28:17 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (1.0.0)
14:28:17 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (2.4.6)
14:28:17 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (12.3.0)
14:28:17 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (3.6.5)
14:28:17 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (2.34.2)
14:28:17 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-render) (3.2.0)
14:28:17 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (3.4.7)
14:28:17 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (3.18)
14:28:17 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (2.7.0)
14:28:17 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-cli-render) (2026.6.17)
14:28:17 Building wheels for collected packages: omero-cli-render
14:28:17   Building wheel for omero-cli-render (pyproject.toml): started
14:28:17   Building wheel for omero-cli-render (pyproject.toml): finished with status 'done'
14:28:17   Created wheel for omero-cli-render: filename=omero_cli_render-0.8.2.dev0-py3-none-any.whl size=19838 sha256=20d55e73343c0da9425c712e4f6d31afeefbd453c5310f4ddfd7190cbee25139
14:28:17   Stored in directory: /tmp/pip-ephem-wheel-cache-dpkwiesm/wheels/cc/67/86/ff54ee10a8ea8ae7a21cceb878741010ef1de4a7d93df129ee
14:28:17 Successfully built omero-cli-render
14:28:17 Installing collected packages: omero-cli-render
14:28:17 Successfully installed omero-cli-render-0.8.2.dev0
14:28:18 + pip install git+https://github.com/snoopycrimecop/omero-cli-duplicate.git@merge_ci#egg=omero-cli-duplicate
14:28:18 Collecting omero-cli-duplicate
14:28:18   Cloning https://github.com/snoopycrimecop/omero-cli-duplicate.git (to revision merge_ci) to /tmp/pip-install-wv8tjc4n/omero-cli-duplicate_dabb6cda22ff42f7955857c2c9bea5ea
14:28:18   Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-cli-duplicate.git /tmp/pip-install-wv8tjc4n/omero-cli-duplicate_dabb6cda22ff42f7955857c2c9bea5ea
14:28:19   Running command git checkout -b merge_ci --track origin/merge_ci
14:28:20   Switched to a new branch 'merge_ci'
14:28:20   branch 'merge_ci' set up to track 'origin/merge_ci'.
14:28:20   Resolved https://github.com/snoopycrimecop/omero-cli-duplicate.git to commit 42072ce7ddf58526c26735240d703594c4271806
14:28:20   Installing build dependencies: started
14:28:21   Installing build dependencies: finished with status 'done'
14:28:21   Getting requirements to build wheel: started
14:28:21   Getting requirements to build wheel: finished with status 'done'
14:28:21   Preparing metadata (pyproject.toml): started
14:28:21   Preparing metadata (pyproject.toml): finished with status 'done'
14:28:21 Requirement already satisfied: omero-py>=5.8 in ./.venv3/lib64/python3.11/site-packages (from omero-cli-duplicate) (5.22.1)
14:28:21 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.4.4)
14:28:21 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (1.0.0)
14:28:21 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (2.4.6)
14:28:21 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (12.3.0)
14:28:21 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (6.0.3)
14:28:21 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (3.6.5)
14:28:21 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (2.34.2)
14:28:21 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.8->omero-cli-duplicate) (3.2.0)
14:28:21 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (3.4.7)
14:28:21 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (3.18)
14:28:21 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (2.7.0)
14:28:21 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.8->omero-cli-duplicate) (2026.6.17)
14:28:21 Building wheels for collected packages: omero-cli-duplicate
14:28:21   Building wheel for omero-cli-duplicate (pyproject.toml): started
14:28:22   Building wheel for omero-cli-duplicate (pyproject.toml): finished with status 'done'
14:28:22   Created wheel for omero-cli-duplicate: filename=omero_cli_duplicate-0.4.1.dev0-py3-none-any.whl size=11538 sha256=91a21f6e428876fc6074fa48aaf62fd6b0246d4ea5579f632fb35318bee4b551
14:28:22   Stored in directory: /tmp/pip-ephem-wheel-cache-4r6vqza5/wheels/28/e4/77/20667ec1be487a1994d60f59ce11eeba2ac0c8c34aea209b46
14:28:22 Successfully built omero-cli-duplicate
14:28:22 Installing collected packages: omero-cli-duplicate
14:28:22 Successfully installed omero-cli-duplicate-0.4.1.dev0
14:28:22 + pip install git+https://github.com/snoopycrimecop/omero-cli-zarr.git@merge_ci#egg=omero-cli-zarr
14:28:23 Collecting omero-cli-zarr
14:28:23   Cloning https://github.com/snoopycrimecop/omero-cli-zarr.git (to revision merge_ci) to /tmp/pip-install-967w4v_3/omero-cli-zarr_dea4be8f1203465799fc1d337e5c65a2
14:28:23   Running command git clone --filter=blob:none --quiet https://github.com/snoopycrimecop/omero-cli-zarr.git /tmp/pip-install-967w4v_3/omero-cli-zarr_dea4be8f1203465799fc1d337e5c65a2
14:28:24   Running command git checkout -b merge_ci --track origin/merge_ci
14:28:24   Switched to a new branch 'merge_ci'
14:28:24   branch 'merge_ci' set up to track 'origin/merge_ci'.
14:28:24   Resolved https://github.com/snoopycrimecop/omero-cli-zarr.git to commit 018fb77e1d941a36c7acb85898c6ba659530e36e
14:28:24   Installing build dependencies: started
14:28:25   Installing build dependencies: finished with status 'done'
14:28:25   Getting requirements to build wheel: started
14:28:26   Getting requirements to build wheel: finished with status 'done'
14:28:26   Installing backend dependencies: started
14:28:27   Installing backend dependencies: finished with status 'done'
14:28:27   Preparing metadata (pyproject.toml): started
14:28:27   Preparing metadata (pyproject.toml): finished with status 'done'
14:28:27 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-cli-zarr) (5.22.1)
14:28:28 Collecting ome-zarr>=0.13.0 (from omero-cli-zarr)
14:28:28   Using cached ome_zarr-0.18.0-py3-none-any.whl.metadata (2.9 kB)
14:28:28 Requirement already satisfied: numpy in ./.venv3/lib64/python3.11/site-packages (from ome-zarr>=0.13.0->omero-cli-zarr) (2.4.6)
14:28:28 Collecting dask!=2025.12.*,!=2026.1.*,!=2026.2.*,>=2025.2.0 (from ome-zarr>=0.13.0->omero-cli-zarr)
14:28:28   Using cached dask-2026.7.0-py3-none-any.whl.metadata (3.8 kB)
14:28:28 Collecting zarr>=3.0.0 (from ome-zarr>=0.13.0->omero-cli-zarr)
14:28:28   Using cached zarr-3.1.6-py3-none-any.whl.metadata (8.6 kB)
14:28:28 Collecting fsspec!=2021.07.0,!=2023.9.0,>=0.8 (from fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
14:28:28   Using cached fsspec-2026.6.0-py3-none-any.whl.metadata (10 kB)
14:28:28 Collecting aiohttp (from ome-zarr>=0.13.0->omero-cli-zarr)
14:28:28   Using cached aiohttp-3.14.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (8.3 kB)
14:28:28 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from ome-zarr>=0.13.0->omero-cli-zarr) (2.34.2)
14:28:29 Collecting scikit-image>=0.19.0 (from ome-zarr>=0.13.0->omero-cli-zarr)
14:28:29   Using cached scikit_image-0.26.0-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl.metadata (15 kB)
14:28:29 Collecting toolz (from ome-zarr>=0.13.0->omero-cli-zarr)
14:28:29   Using cached toolz-1.1.0-py3-none-any.whl.metadata (5.1 kB)
14:28:29 Collecting rangehttpserver (from ome-zarr>=0.13.0->omero-cli-zarr)
14:28:29   Using cached rangehttpserver-1.4.0-py2.py3-none-any.whl.metadata (769 bytes)
14:28:29 Collecting ome-zarr-models>=1.6 (from ome-zarr>=0.13.0->omero-cli-zarr)
14:28:29   Using cached ome_zarr_models-1.7-py3-none-any.whl.metadata (3.0 kB)
14:28:29 Collecting Deprecated (from ome-zarr>=0.13.0->omero-cli-zarr)
14:28:29   Using cached deprecated-1.3.1-py2.py3-none-any.whl.metadata (5.9 kB)
14:28:29 Collecting click>=8.1 (from dask!=2025.12.*,!=2026.1.*,!=2026.2.*,>=2025.2.0->ome-zarr>=0.13.0->omero-cli-zarr)
14:28:29   Using cached click-8.4.2-py3-none-any.whl.metadata (2.6 kB)
14:28:29 Collecting cloudpickle>=3.0.0 (from dask!=2025.12.*,!=2026.1.*,!=2026.2.*,>=2025.2.0->ome-zarr>=0.13.0->omero-cli-zarr)
14:28:29   Using cached cloudpickle-3.1.2-py3-none-any.whl.metadata (7.1 kB)
14:28:29 Requirement already satisfied: packaging>=20.0 in ./.venv3/lib64/python3.11/site-packages (from dask!=2025.12.*,!=2026.1.*,!=2026.2.*,>=2025.2.0->ome-zarr>=0.13.0->omero-cli-zarr) (26.2)
14:28:29 Collecting partd>=1.4.0 (from dask!=2025.12.*,!=2026.1.*,!=2026.2.*,>=2025.2.0->ome-zarr>=0.13.0->omero-cli-zarr)
14:28:29   Using cached partd-1.4.2-py3-none-any.whl.metadata (4.6 kB)
14:28:29 Requirement already satisfied: pyyaml>=5.4.1 in ./.venv3/lib64/python3.11/site-packages (from dask!=2025.12.*,!=2026.1.*,!=2026.2.*,>=2025.2.0->ome-zarr>=0.13.0->omero-cli-zarr) (6.0.3)
14:28:29 Collecting importlib_metadata>=4.13.0 (from dask!=2025.12.*,!=2026.1.*,!=2026.2.*,>=2025.2.0->ome-zarr>=0.13.0->omero-cli-zarr)
14:28:29   Using cached importlib_metadata-9.0.0-py3-none-any.whl.metadata (4.5 kB)
14:28:29 Collecting s3fs>2024.2.0 (from fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
14:28:29   Using cached s3fs-2026.6.0-py3-none-any.whl.metadata (1.2 kB)
14:28:29 Collecting zipp>=3.20 (from importlib_metadata>=4.13.0->dask!=2025.12.*,!=2026.1.*,!=2026.2.*,>=2025.2.0->ome-zarr>=0.13.0->omero-cli-zarr)
14:28:29   Using cached zipp-4.1.0-py3-none-any.whl.metadata (3.6 kB)
14:28:29 Collecting pydantic-zarr>=0.8.2 (from ome-zarr-models>=1.6->ome-zarr>=0.13.0->omero-cli-zarr)
14:28:29   Using cached pydantic_zarr-0.9.2-py3-none-any.whl.metadata (4.0 kB)
14:28:29 Collecting pydantic<2.13,>=2.11.5 (from ome-zarr-models>=1.6->ome-zarr>=0.13.0->omero-cli-zarr)
14:28:29   Using cached pydantic-2.12.5-py3-none-any.whl.metadata (90 kB)
14:28:29 Requirement already satisfied: annotated-types>=0.6.0 in ./.venv3/lib64/python3.11/site-packages (from pydantic<2.13,>=2.11.5->ome-zarr-models>=1.6->ome-zarr>=0.13.0->omero-cli-zarr) (0.7.0)
14:28:30 Collecting pydantic-core==2.41.5 (from pydantic<2.13,>=2.11.5->ome-zarr-models>=1.6->ome-zarr>=0.13.0->omero-cli-zarr)
14:28:30   Using cached pydantic_core-2.41.5-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (7.3 kB)
14:28:30 Requirement already satisfied: typing-extensions>=4.14.1 in ./.venv3/lib64/python3.11/site-packages (from pydantic<2.13,>=2.11.5->ome-zarr-models>=1.6->ome-zarr>=0.13.0->omero-cli-zarr) (4.16.0)
14:28:30 Requirement already satisfied: typing-inspection>=0.4.2 in ./.venv3/lib64/python3.11/site-packages (from pydantic<2.13,>=2.11.5->ome-zarr-models>=1.6->ome-zarr>=0.13.0->omero-cli-zarr) (0.4.2)
14:28:30 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr) (1.4.4)
14:28:30 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr) (1.0.0)
14:28:30 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr) (12.3.0)
14:28:30 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr) (3.6.5)
14:28:30 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-cli-zarr) (3.2.0)
14:28:30 Collecting locket (from partd>=1.4.0->dask!=2025.12.*,!=2026.1.*,!=2026.2.*,>=2025.2.0->ome-zarr>=0.13.0->omero-cli-zarr)
14:28:30   Using cached locket-1.0.0-py2.py3-none-any.whl.metadata (2.8 kB)
14:28:30 Collecting aiobotocore<4.0.0,>=2.19.0 (from s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
14:28:30   Using cached aiobotocore-3.7.0-py3-none-any.whl.metadata (28 kB)
14:28:30 Collecting aioitertools<1.0.0,>=0.5.1 (from aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
14:28:30   Using cached aioitertools-0.13.0-py3-none-any.whl.metadata (3.3 kB)
14:28:31 Collecting botocore<1.43.1,>=1.42.90 (from aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
14:28:31   Using cached botocore-1.43.0-py3-none-any.whl.metadata (5.5 kB)
14:28:31 Requirement already satisfied: python-dateutil<3.0.0,>=2.1 in ./.venv3/lib64/python3.11/site-packages (from aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr) (2.9.0.post0)
14:28:31 Collecting jmespath<2.0.0,>=0.7.1 (from aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
14:28:31   Using cached jmespath-1.1.0-py3-none-any.whl.metadata (7.6 kB)
14:28:31 Collecting multidict<7.0.0,>=6.0.0 (from aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
14:28:31   Using cached multidict-6.7.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (5.3 kB)
14:28:31 Collecting wrapt<3.0.0,>=1.10.10 (from aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr)
14:28:31   Using cached wrapt-2.2.2-cp311-cp311-manylinux1_x86_64.manylinux_2_28_x86_64.manylinux_2_5_x86_64.whl.metadata (7.4 kB)
14:28:31 Collecting aiohappyeyeballs>=2.5.0 (from aiohttp->ome-zarr>=0.13.0->omero-cli-zarr)
14:28:31   Using cached aiohappyeyeballs-2.7.1-py3-none-any.whl.metadata (5.9 kB)
14:28:32 Collecting aiosignal>=1.4.0 (from aiohttp->ome-zarr>=0.13.0->omero-cli-zarr)
14:28:32   Using cached aiosignal-1.4.0-py3-none-any.whl.metadata (3.7 kB)
14:28:32 Collecting attrs>=17.3.0 (from aiohttp->ome-zarr>=0.13.0->omero-cli-zarr)
14:28:32   Using cached attrs-26.1.0-py3-none-any.whl.metadata (8.8 kB)
14:28:32 Collecting frozenlist>=1.1.1 (from aiohttp->ome-zarr>=0.13.0->omero-cli-zarr)
14:28:32   Using cached frozenlist-1.8.0-cp311-cp311-manylinux1_x86_64.manylinux_2_28_x86_64.manylinux_2_5_x86_64.whl.metadata (20 kB)
14:28:32 Collecting propcache>=0.2.0 (from aiohttp->ome-zarr>=0.13.0->omero-cli-zarr)
14:28:32   Using cached propcache-0.5.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (16 kB)
14:28:32 Collecting yarl<2.0,>=1.17.0 (from aiohttp->ome-zarr>=0.13.0->omero-cli-zarr)
14:28:32   Using cached yarl-1.24.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (94 kB)
14:28:32 Requirement already satisfied: urllib3!=2.2.0,<3,>=1.25.4 in ./.venv3/lib64/python3.11/site-packages (from botocore<1.43.1,>=1.42.90->aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr) (2.7.0)
14:28:32 Requirement already satisfied: six>=1.5 in ./.venv3/lib64/python3.11/site-packages (from python-dateutil<3.0.0,>=2.1->aiobotocore<4.0.0,>=2.19.0->s3fs>2024.2.0->fsspec[s3]!=2021.07.0,!=2023.9.0,>=0.8->ome-zarr>=0.13.0->omero-cli-zarr) (1.17.0)
14:28:32 Requirement already satisfied: idna>=2.0 in ./.venv3/lib64/python3.11/site-packages (from yarl<2.0,>=1.17.0->aiohttp->ome-zarr>=0.13.0->omero-cli-zarr) (3.18)
14:28:32 Collecting scipy>=1.11.4 (from scikit-image>=0.19.0->ome-zarr>=0.13.0->omero-cli-zarr)
14:28:32   Using cached scipy-1.17.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (62 kB)
14:28:32 Collecting networkx>=3.0 (from scikit-image>=0.19.0->ome-zarr>=0.13.0->omero-cli-zarr)
14:28:32   Using cached networkx-3.6.1-py3-none-any.whl.metadata (6.8 kB)
14:28:32 Collecting imageio!=2.35.0,>=2.33 (from scikit-image>=0.19.0->ome-zarr>=0.13.0->omero-cli-zarr)
14:28:32   Using cached imageio-2.37.3-py3-none-any.whl.metadata (9.7 kB)
14:28:33 Collecting tifffile>=2022.8.12 (from scikit-image>=0.19.0->ome-zarr>=0.13.0->omero-cli-zarr)
14:28:33   Using cached tifffile-2026.3.3-py3-none-any.whl.metadata (31 kB)
14:28:33 Collecting lazy-loader>=0.4 (from scikit-image>=0.19.0->ome-zarr>=0.13.0->omero-cli-zarr)
14:28:33   Using cached lazy_loader-0.5-py3-none-any.whl.metadata (5.9 kB)
14:28:33 Collecting donfig>=0.8 (from zarr>=3.0.0->ome-zarr>=0.13.0->omero-cli-zarr)
14:28:33   Using cached donfig-0.8.1.post1-py3-none-any.whl.metadata (5.0 kB)
14:28:33 Collecting google-crc32c>=1.5 (from zarr>=3.0.0->ome-zarr>=0.13.0->omero-cli-zarr)
14:28:33   Using cached google_crc32c-1.8.0-cp311-cp311-manylinux1_x86_64.manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_5_x86_64.whl.metadata (1.7 kB)
14:28:33 Collecting numcodecs>=0.14 (from zarr>=3.0.0->ome-zarr>=0.13.0->omero-cli-zarr)
14:28:33   Using cached numcodecs-0.16.5-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (3.4 kB)
14:28:33 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->ome-zarr>=0.13.0->omero-cli-zarr) (3.4.7)
14:28:33 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->ome-zarr>=0.13.0->omero-cli-zarr) (2026.6.17)
14:28:33 Using cached ome_zarr-0.18.0-py3-none-any.whl (57 kB)
14:28:33 Using cached dask-2026.7.0-py3-none-any.whl (1.5 MB)
14:28:33 Using cached click-8.4.2-py3-none-any.whl (119 kB)
14:28:33 Using cached cloudpickle-3.1.2-py3-none-any.whl (22 kB)
14:28:33 Using cached fsspec-2026.6.0-py3-none-any.whl (203 kB)
14:28:33 Using cached importlib_metadata-9.0.0-py3-none-any.whl (27 kB)
14:28:33 Using cached ome_zarr_models-1.7-py3-none-any.whl (64 kB)
14:28:33 Using cached pydantic-2.12.5-py3-none-any.whl (463 kB)
14:28:33 Using cached pydantic_core-2.41.5-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (2.1 MB)
14:28:33 Using cached partd-1.4.2-py3-none-any.whl (18 kB)
14:28:33 Using cached pydantic_zarr-0.9.2-py3-none-any.whl (52 kB)
14:28:33 Using cached s3fs-2026.6.0-py3-none-any.whl (32 kB)
14:28:33 Using cached aiobotocore-3.7.0-py3-none-any.whl (89 kB)
14:28:33 Using cached aiohttp-3.14.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (1.8 MB)
14:28:33 Using cached aioitertools-0.13.0-py3-none-any.whl (24 kB)
14:28:33 Using cached botocore-1.43.0-py3-none-any.whl (15.0 MB)
14:28:33 Using cached jmespath-1.1.0-py3-none-any.whl (20 kB)
14:28:33 Using cached multidict-6.7.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (246 kB)
14:28:33 Using cached wrapt-2.2.2-cp311-cp311-manylinux1_x86_64.manylinux_2_28_x86_64.manylinux_2_5_x86_64.whl (159 kB)
14:28:33 Using cached yarl-1.24.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (106 kB)
14:28:33 Using cached aiohappyeyeballs-2.7.1-py3-none-any.whl (15 kB)
14:28:33 Using cached aiosignal-1.4.0-py3-none-any.whl (7.5 kB)
14:28:33 Using cached attrs-26.1.0-py3-none-any.whl (67 kB)
14:28:33 Using cached frozenlist-1.8.0-cp311-cp311-manylinux1_x86_64.manylinux_2_28_x86_64.manylinux_2_5_x86_64.whl (231 kB)
14:28:33 Using cached propcache-0.5.2-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (58 kB)
14:28:33 Using cached scikit_image-0.26.0-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl (13.7 MB)
14:28:33 Using cached imageio-2.37.3-py3-none-any.whl (317 kB)
14:28:33 Using cached lazy_loader-0.5-py3-none-any.whl (8.0 kB)
14:28:33 Using cached networkx-3.6.1-py3-none-any.whl (2.1 MB)
14:28:33 Using cached scipy-1.17.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (35.3 MB)
14:28:33 Using cached tifffile-2026.3.3-py3-none-any.whl (243 kB)
14:28:33 Using cached toolz-1.1.0-py3-none-any.whl (58 kB)
14:28:33 Using cached zarr-3.1.6-py3-none-any.whl (295 kB)
14:28:33 Using cached donfig-0.8.1.post1-py3-none-any.whl (21 kB)
14:28:33 Using cached google_crc32c-1.8.0-cp311-cp311-manylinux1_x86_64.manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_5_x86_64.whl (33 kB)
14:28:33 Using cached numcodecs-0.16.5-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (9.1 MB)
14:28:33 Using cached zipp-4.1.0-py3-none-any.whl (10 kB)
14:28:33 Using cached deprecated-1.3.1-py2.py3-none-any.whl (11 kB)
14:28:33 Using cached locket-1.0.0-py2.py3-none-any.whl (4.4 kB)
14:28:33 Using cached rangehttpserver-1.4.0-py2.py3-none-any.whl (7.8 kB)
14:28:34 Building wheels for collected packages: omero-cli-zarr
14:28:34   Building wheel for omero-cli-zarr (pyproject.toml): started
14:28:34   Building wheel for omero-cli-zarr (pyproject.toml): finished with status 'done'
14:28:34   Created wheel for omero-cli-zarr: filename=omero_cli_zarr-0.5.5.dev162+g018fb77-py3-none-any.whl size=38290 sha256=bbd8d5dda562e3aa0769ccd4bee08a9358df58899ba51653247d446bbe21ab73
14:28:34   Stored in directory: /tmp/pip-ephem-wheel-cache-7wi399ay/wheels/23/9b/a6/58188c5a16d0876457bd9f2c6a2fb9759c671db67032a0e529
14:28:34 Successfully built omero-cli-zarr
14:28:34 Installing collected packages: rangehttpserver, zipp, wrapt, toolz, tifffile, scipy, pydantic-core, propcache, numcodecs, networkx, multidict, locket, lazy-loader, jmespath, imageio, google-crc32c, fsspec, frozenlist, donfig, cloudpickle, click, attrs, aioitertools, aiohappyeyeballs, zarr, yarl, scikit-image, pydantic, partd, importlib_metadata, Deprecated, botocore, aiosignal, pydantic-zarr, dask, aiohttp, ome-zarr-models, aiobotocore, s3fs, ome-zarr, omero-cli-zarr
14:29:12   Attempting uninstall: pydantic-core
14:29:12     Found existing installation: pydantic_core 2.46.4
14:29:12     Uninstalling pydantic_core-2.46.4:
14:29:12       Successfully uninstalled pydantic_core-2.46.4
14:29:46   Attempting uninstall: pydantic
14:29:46     Found existing installation: pydantic 2.13.4
14:29:47     Uninstalling pydantic-2.13.4:
14:29:47       Successfully uninstalled pydantic-2.13.4
14:30:26 
14:30:26 Successfully installed Deprecated-1.3.1 aiobotocore-3.7.0 aiohappyeyeballs-2.7.1 aiohttp-3.14.1 aioitertools-0.13.0 aiosignal-1.4.0 attrs-26.1.0 botocore-1.43.0 click-8.4.2 cloudpickle-3.1.2 dask-2026.7.0 donfig-0.8.1.post1 frozenlist-1.8.0 fsspec-2026.6.0 google-crc32c-1.8.0 imageio-2.37.3 importlib_metadata-9.0.0 jmespath-1.1.0 lazy-loader-0.5 locket-1.0.0 multidict-6.7.1 networkx-3.6.1 numcodecs-0.16.5 ome-zarr-0.18.0 ome-zarr-models-1.7 omero-cli-zarr-0.5.5.dev162+g018fb77 partd-1.4.2 propcache-0.5.2 pydantic-2.12.5 pydantic-core-2.41.5 pydantic-zarr-0.9.2 rangehttpserver-1.4.0 s3fs-2026.6.0 scikit-image-0.26.0 scipy-1.17.1 tifffile-2026.3.3 toolz-1.1.0 wrapt-2.2.2 yarl-1.24.2 zarr-3.1.6 zipp-4.1.0
14:30:26 + pip install omero-certificates
14:30:27 Collecting omero-certificates
14:30:27   Using cached omero_certificates-0.4.0-py3-none-any.whl.metadata (3.3 kB)
14:30:27 Requirement already satisfied: omero-py>=5.6.0 in ./.venv3/lib64/python3.11/site-packages (from omero-certificates) (5.22.1)
14:30:27 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (1.4.4)
14:30:27 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (1.0.0)
14:30:27 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (2.4.6)
14:30:27 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (12.3.0)
14:30:27 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (6.0.3)
14:30:27 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (3.6.5)
14:30:27 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (2.34.2)
14:30:27 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.6.0->omero-certificates) (3.2.0)
14:30:27 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (3.4.7)
14:30:27 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (3.18)
14:30:27 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (2.7.0)
14:30:27 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.6.0->omero-certificates) (2026.6.17)
14:30:27 Using cached omero_certificates-0.4.0-py3-none-any.whl (11 kB)
14:30:27 Installing collected packages: omero-certificates
14:30:28 Successfully installed omero-certificates-0.4.0
14:30:28 + for x in *.tar.gz
14:30:28 + pip install -U omero_dropbox-5.7.1.dev0.tar.gz
14:30:29 Processing ./omero_dropbox-5.7.1.dev0.tar.gz
14:30:29   Installing build dependencies: started
14:30:30   Installing build dependencies: finished with status 'done'
14:30:30   Getting requirements to build wheel: started
14:30:30   Getting requirements to build wheel: finished with status 'done'
14:30:30   Preparing metadata (pyproject.toml): started
14:30:31   Preparing metadata (pyproject.toml): finished with status 'done'
14:30:31 Requirement already satisfied: omero-py in ./.venv3/lib64/python3.11/site-packages (from omero-dropbox==5.7.1.dev0) (5.22.1)
14:30:31 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.4.4)
14:30:31 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (1.0.0)
14:30:31 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.4.6)
14:30:31 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (12.3.0)
14:30:31 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (6.0.3)
14:30:31 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.6.5)
14:30:31 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.34.2)
14:30:31 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.2.0)
14:30:31 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.4.7)
14:30:31 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.18)
14:30:31 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2.7.0)
14:30:31 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2026.6.17)
14:30:31 Building wheels for collected packages: omero-dropbox
14:30:31   Building wheel for omero-dropbox (pyproject.toml): started
14:30:31   Building wheel for omero-dropbox (pyproject.toml): finished with status 'done'
14:30:31   Created wheel for omero-dropbox: filename=omero_dropbox-5.7.1.dev0-py3-none-any.whl size=49153 sha256=5a608176d359260f748f1356b53a42a5bfc3ce6f05f5a76d83446f16edb4fd84
14:30:31   Stored in directory: /home/omero/.cache/pip/wheels/97/54/5f/8dccf5c24b891c9bef25978dac72ee622eda35946855e06c92
14:30:31 Successfully built omero-dropbox
14:30:31 Installing collected packages: omero-dropbox
14:30:32 Successfully installed omero-dropbox-5.7.1.dev0
14:30:32 + for x in *.tar.gz
14:30:32 + pip install -U omero_marshal-0.9.2.dev0.tar.gz
14:30:33 Processing ./omero_marshal-0.9.2.dev0.tar.gz
14:30:33   Installing build dependencies: started
14:30:34   Installing build dependencies: finished with status 'done'
14:30:34   Getting requirements to build wheel: started
14:30:34   Getting requirements to build wheel: finished with status 'done'
14:30:34   Preparing metadata (pyproject.toml): started
14:30:35   Preparing metadata (pyproject.toml): finished with status 'done'
14:30:35 Building wheels for collected packages: omero_marshal
14:30:35   Building wheel for omero_marshal (pyproject.toml): started
14:30:35   Building wheel for omero_marshal (pyproject.toml): finished with status 'done'
14:30:35   Created wheel for omero_marshal: filename=omero_marshal-0.9.2.dev0-py3-none-any.whl size=88129 sha256=709eb65bc543f6c839ff634e4169b776ed101b4b68f893cd7da206353145e1c3
14:30:35   Stored in directory: /home/omero/.cache/pip/wheels/38/19/f8/b7cbc5aa44dc10bd3c24777f40a22cf6ed1baeac622bbf8230
14:30:35 Successfully built omero_marshal
14:30:35 Installing collected packages: omero_marshal
14:30:37 Successfully installed omero_marshal-0.9.2.dev0
14:30:38 + for x in *.tar.gz
14:30:38 + pip install -U omero_py-5.22.2.dev0.tar.gz
14:30:38 Processing ./omero_py-5.22.2.dev0.tar.gz
14:30:39   Installing build dependencies: started
14:30:40   Installing build dependencies: finished with status 'done'
14:30:40   Getting requirements to build wheel: started
14:30:40   Getting requirements to build wheel: finished with status 'done'
14:30:40   Preparing metadata (pyproject.toml): started
14:30:41   Preparing metadata (pyproject.toml): finished with status 'done'
14:30:41 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (1.4.4)
14:30:41 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (1.0.0)
14:30:41 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (2.4.6)
14:30:41 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (12.3.0)
14:30:41 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (6.0.3)
14:30:41 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (3.6.5)
14:30:41 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (2.34.2)
14:30:41 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (3.2.0)
14:30:41 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.2.dev0) (3.4.7)
14:30:41 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.2.dev0) (3.18)
14:30:41 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.2.dev0) (2.7.0)
14:30:41 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.2.dev0) (2026.6.17)
14:30:41 Building wheels for collected packages: omero-py
14:30:41   Building wheel for omero-py (pyproject.toml): started
14:30:42   Building wheel for omero-py (pyproject.toml): finished with status 'done'
14:30:42   Created wheel for omero-py: filename=omero_py-5.22.2.dev0-py3-none-any.whl size=2787060 sha256=1c9ca354f9b6a1baa3450eefcfcd5d21ec904d2b6967d98a38b6222fd42fa439
14:30:42   Stored in directory: /home/omero/.cache/pip/wheels/ec/3f/72/4027ca0a7faf1f66d4577cc07619b0497ac8e99396d43dd8fa
14:30:42 Successfully built omero-py
14:30:42 Installing collected packages: omero-py
14:30:42   Attempting uninstall: omero-py
14:30:42     Found existing installation: omero-py 5.22.1
14:30:43     Uninstalling omero-py-5.22.1:
14:30:54       Successfully uninstalled omero-py-5.22.1
14:31:11 Successfully installed omero-py-5.22.2.dev0
14:31:11 + for x in *.tar.gz
14:31:11 + pip install -U omero_scripts-5.10.1.dev0.tar.gz
14:31:12 Processing ./omero_scripts-5.10.1.dev0.tar.gz
14:31:12   Installing build dependencies: started
14:31:13   Installing build dependencies: finished with status 'done'
14:31:13   Getting requirements to build wheel: started
14:31:13   Getting requirements to build wheel: finished with status 'done'
14:31:13   Preparing metadata (pyproject.toml): started
14:31:14   Preparing metadata (pyproject.toml): finished with status 'done'
14:31:14 Building wheels for collected packages: omero-scripts
14:31:14   Building wheel for omero-scripts (pyproject.toml): started
14:31:14   Building wheel for omero-scripts (pyproject.toml): finished with status 'done'
14:31:14   Created wheel for omero-scripts: filename=omero_scripts-5.10.1.dev0-py3-none-any.whl size=136999 sha256=1a68da9cf9c894e917c4f83dfb719d894d2b9bfaec129a6c504e36f1a86fad52
14:31:14   Stored in directory: /home/omero/.cache/pip/wheels/42/27/9e/76575465f2b255db596bcfcfc1a50c113f5603b7dc93ec491e
14:31:14 Successfully built omero-scripts
14:31:14 Installing collected packages: omero-scripts
14:31:15 Successfully installed omero-scripts-5.10.1.dev0
14:31:15 + for x in *.tar.gz
14:31:15 + pip install -U omero_web-5.32.1.dev0.tar.gz
14:31:16 Processing ./omero_web-5.32.1.dev0.tar.gz
14:31:16   Installing build dependencies: started
14:31:18   Installing build dependencies: finished with status 'done'
14:31:18   Getting requirements to build wheel: started
14:31:18   Getting requirements to build wheel: finished with status 'done'
14:31:18   Preparing metadata (pyproject.toml): started
14:31:18   Preparing metadata (pyproject.toml): finished with status 'done'
14:31:18 Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.32.1.dev0) (5.22.2.dev0)
14:31:18 Collecting concurrent-log-handler>=0.9.20 (from omero-web==5.32.1.dev0)
14:31:19   Using cached concurrent_log_handler-0.9.29-py3-none-any.whl.metadata (27 kB)
14:31:19 Collecting Django<5.3,>=5.2.9 (from omero-web==5.32.1.dev0)
14:31:19   Using cached django-5.2.16-py3-none-any.whl.metadata (4.1 kB)
14:31:19 Collecting django-pipeline>=4.1.0 (from omero-web==5.32.1.dev0)
14:31:19   Using cached django_pipeline-4.1.0-py3-none-any.whl.metadata (5.9 kB)
14:31:19 Collecting django-cors-headers==3.7.0 (from omero-web==5.32.1.dev0)
14:31:19   Using cached django_cors_headers-3.7.0-py3-none-any.whl.metadata (15 kB)
14:31:19 Collecting whitenoise>=5.3.0 (from omero-web==5.32.1.dev0)
14:31:19   Using cached whitenoise-6.12.0-py3-none-any.whl.metadata (3.7 kB)
14:31:19 Collecting gunicorn>=19.3 (from omero-web==5.32.1.dev0)
14:31:19   Using cached gunicorn-26.0.0-py3-none-any.whl.metadata (5.4 kB)
14:31:19 Requirement already satisfied: omero-marshal>=0.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.32.1.dev0) (0.9.2.dev0)
14:31:19 Requirement already satisfied: Pillow in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.32.1.dev0) (12.3.0)
14:31:19 Collecting pytz (from omero-web==5.32.1.dev0)
14:31:19   Using cached pytz-2026.2-py2.py3-none-any.whl.metadata (22 kB)
14:31:19 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.32.1.dev0) (3.2.0)
14:31:19 Requirement already satisfied: packaging in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.32.1.dev0) (26.2)
14:31:19 Collecting importlib-resources (from omero-web==5.32.1.dev0)
14:31:19   Using cached importlib_resources-7.1.0-py3-none-any.whl.metadata (4.0 kB)
14:31:19 Collecting asgiref>=3.8.1 (from Django<5.3,>=5.2.9->omero-web==5.32.1.dev0)
14:31:19   Using cached asgiref-3.11.1-py3-none-any.whl.metadata (9.3 kB)
14:31:19 Collecting sqlparse>=0.3.1 (from Django<5.3,>=5.2.9->omero-web==5.32.1.dev0)
14:31:19   Using cached sqlparse-0.5.5-py3-none-any.whl.metadata (4.7 kB)
14:31:19 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web==5.32.1.dev0) (65.5.1)
14:31:19 Collecting wheel (from django-pipeline>=4.1.0->omero-web==5.32.1.dev0)
14:31:19   Using cached wheel-0.47.0-py3-none-any.whl.metadata (2.3 kB)
14:31:19 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.32.1.dev0) (1.4.4)
14:31:19 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.32.1.dev0) (1.0.0)
14:31:19 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.32.1.dev0) (2.4.6)
14:31:19 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.32.1.dev0) (6.0.3)
14:31:19 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.32.1.dev0) (3.6.5)
14:31:19 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.32.1.dev0) (2.34.2)
14:31:19 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.32.1.dev0) (3.4.7)
14:31:19 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.32.1.dev0) (3.18)
14:31:19 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.32.1.dev0) (2.7.0)
14:31:19 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.32.1.dev0) (2026.6.17)
14:31:19 Using cached django_cors_headers-3.7.0-py3-none-any.whl (12 kB)
14:31:19 Using cached django-5.2.16-py3-none-any.whl (8.3 MB)
14:31:19 Using cached asgiref-3.11.1-py3-none-any.whl (24 kB)
14:31:19 Using cached concurrent_log_handler-0.9.29-py3-none-any.whl (32 kB)
14:31:19 Using cached django_pipeline-4.1.0-py3-none-any.whl (75 kB)
14:31:19 Using cached gunicorn-26.0.0-py3-none-any.whl (212 kB)
14:31:19 Using cached sqlparse-0.5.5-py3-none-any.whl (46 kB)
14:31:19 Using cached whitenoise-6.12.0-py3-none-any.whl (20 kB)
14:31:19 Using cached importlib_resources-7.1.0-py3-none-any.whl (37 kB)
14:31:19 Using cached pytz-2026.2-py2.py3-none-any.whl (510 kB)
14:31:19 Using cached wheel-0.47.0-py3-none-any.whl (32 kB)
14:31:19 Building wheels for collected packages: omero-web
14:31:19   Building wheel for omero-web (pyproject.toml): started
14:31:21   Building wheel for omero-web (pyproject.toml): finished with status 'done'
14:31:21   Created wheel for omero-web: filename=omero_web-5.32.1.dev0-py3-none-any.whl size=2820645 sha256=b24158576d8d45668f7fa1fc0b6402b969cdfcbd1c3b0d803e68414ee9df472a
14:31:21   Stored in directory: /home/omero/.cache/pip/wheels/e6/f6/6f/ec36dda9edad720aabd7330edafa8a6a62d6ebfa4c7467248f
14:31:21 Successfully built omero-web
14:31:21 Installing collected packages: pytz, whitenoise, wheel, sqlparse, importlib-resources, gunicorn, concurrent-log-handler, asgiref, django-pipeline, Django, django-cors-headers, omero-web
14:32:29 
14:32:29 Successfully installed Django-5.2.16 asgiref-3.11.1 concurrent-log-handler-0.9.29 django-cors-headers-3.7.0 django-pipeline-4.1.0 gunicorn-26.0.0 importlib-resources-7.1.0 omero-web-5.32.1.dev0 pytz-2026.2 sqlparse-0.5.5 wheel-0.47.0 whitenoise-6.12.0
14:32:30 + wget https://raw.githubusercontent.com/snoopycrimecop/omero-figure/merge_ci/omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
14:32:30 --2026-07-07 14:32:30--  https://raw.githubusercontent.com/snoopycrimecop/omero-figure/merge_ci/omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py
14:32:30 Resolving raw.githubusercontent.com (raw.githubusercontent.com)... 185.199.110.133, 185.199.108.133, 185.199.111.133, ...
14:32:30 Connecting to raw.githubusercontent.com (raw.githubusercontent.com)|185.199.110.133|:443... connected.
14:32:30 HTTP request sent, awaiting response... 200 OK
14:32:30 Length: 139337 (136K) [text/plain]
14:32:30 Saving to: ‘Figure_To_Pdf.py’
14:32:30 
14:32:30      0K .......... .......... .......... .......... .......... 36% 4.67M 0s
14:32:30     50K .......... .......... .......... .......... .......... 73% 7.23M 0s
14:32:30    100K .......... .......... .......... ......               100% 8.73M=0.02s
14:32:30 
14:32:30 2026-07-07 14:32:30 (6.26 MB/s) - ‘Figure_To_Pdf.py’ saved [139337/139337]
14:32:30 
14:32:30 + chmod 755 Figure_To_Pdf.py
14:32:30 + mv Figure_To_Pdf.py /home/omero/workspace/OMERO-server/OMERO.server/lib/scripts/omero/figure_scripts
14:32:30 + omero config set omero.db.name OMERO-server
14:32:37 + omero config set omero.db.host pg
14:32:42 + omero config set omero.db.user postgres
14:32:47 + omero config set omero.data.dir /home/omero/omero-server-data
14:32:52 + omero config set omero.fs.repo.path %user%_%userId%/%thread%//%year%-%month%/%day%/%time%
14:32:57 + omero config set omero.db.poolsize 25
14:33:02 + omero config set omero.security.trustStore /etc/pki/ca-trust/extracted/java/cacerts
14:33:07 + omero config set omero.security.trustStorePassword changeit
14:33:12 + omero config set omero.mail.config true
14:33:17 + omero config set omero.server.nodedescriptors master:Blitz-0,Indexer-0,Processor-0,Storm,Tables-0
14:33:22 + omero config set omero.jvmcfg.append '--add-opens java.base/java.lang=ALL-UNNAMED --add-exports java.naming/com.sun.jndi.ldap=ALL-UNNAMED'
14:33:27 + omero certificates
14:33:32 OpenSSL 3.5.5 27 Jan 2026 (Library: OpenSSL 3.5.5 27 Jan 2026)
14:33:32 certificates created: /home/omero/omero-server-data/certs/server.pem /home/omero/omero-server-data/certs/server.p12
14:33:32 + '[' false = true ']'
14:33:32 + echo 'Skipping PURGE_DATA:CleanDbAndRepo. Check for DB upgrade'
14:33:32 Skipping PURGE_DATA:CleanDbAndRepo. Check for DB upgrade
14:33:32 + omego db -vvv upgrade --serverdir /home/omero/workspace/OMERO-server/OMERO.server --dbname OMERO-server
14:33:32 2026-07-07 14:33:32,813 [    omego.db] DEBUG            dbcommand => upgrade
14:33:32 2026-07-07 14:33:32,813 [    omego.db] DEBUG               dbhost => localhost
14:33:32 2026-07-07 14:33:32,813 [    omego.db] DEBUG               dbname => OMERO-server
14:33:32 2026-07-07 14:33:32,813 [    omego.db] DEBUG               dbpass => omero
14:33:32 2026-07-07 14:33:32,813 [    omego.db] DEBUG               dbuser => omero
14:33:32 2026-07-07 14:33:32,813 [    omego.db] DEBUG             rootpass => omero
14:33:32 2026-07-07 14:33:32,813 [    omego.db] DEBUG            serverdir => /home/omero/workspace/OMERO-server/OMERO.server
14:33:32 2026-07-07 14:33:32,814 [omego.extern] INFO  Executing : omero version
14:33:37 OMERO.py version:
14:33:37 OMERO.server version:
14:33:37 5.6.3-614-b7d1771417-ice36-b2
14:33:37 5.22.2.dev0
14:33:37 2026-07-07 14:33:37,914 [omego.extern] INFO  Completed [5.100 s]
14:33:37 2026-07-07 14:33:37,915 [omego.extern] DEBUG Using omero CLI from omero
14:33:37 2026-07-07 14:33:37,915 [    omego.db] INFO  DbAdmin: DbAdmin /home/omero/workspace/OMERO-server/OMERO.server ...
14:33:37 2026-07-07 14:33:37,915 [omego.extern] INFO  Running [current environment]: omero config get --show-password
14:33:37 2026-07-07 14:33:37,915 [omego.extern] INFO  Executing : omero config get --show-password
14:33:42 2026-07-07 14:33:42,682 [omego.extern] INFO  Completed [4.767 s]
14:33:42 2026-07-07 14:33:42,682 [    omego.db] INFO  Failed to lookup parameter omero.db.pass, using omero
14:33:42 2026-07-07 14:33:42,682 [omego.extern] INFO  Executing [custom environment]: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t --version
14:33:42 2026-07-07 14:33:42,688 [omego.extern] INFO  Completed [0.006 s]
14:33:42 2026-07-07 14:33:42,688 [    omego.db] DEBUG stdout: b'psql (PostgreSQL) 16.14\n'
14:33:42 2026-07-07 14:33:42,688 [    omego.db] INFO  psql version: psql (PostgreSQL) 16.14
14:33:42 
14:33:42 2026-07-07 14:33:42,688 [omego.extern] INFO  Running [current environment]: omero config get --show-password
14:33:42 2026-07-07 14:33:42,688 [omego.extern] INFO  Executing : omero config get --show-password
14:33:47 2026-07-07 14:33:47,573 [omego.extern] INFO  Completed [4.884 s]
14:33:47 2026-07-07 14:33:47,573 [    omego.db] INFO  Failed to lookup parameter omero.db.pass, using omero
14:33:47 2026-07-07 14:33:47,573 [omego.extern] INFO  Executing [custom environment]: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t -c \conninfo
14:33:47 2026-07-07 14:33:47,589 [omego.extern] INFO  Completed [0.016 s]
14:33:47 2026-07-07 14:33:47,589 [    omego.db] DEBUG stdout: b'You are connected to database "OMERO-server" as user "postgres" on host "pg" (address "172.18.0.6") at port "5432".\n'
14:33:47 2026-07-07 14:33:47,589 [    omego.db] DEBUG Executing query: SELECT currentversion, currentpatch FROM dbpatch ORDER BY id DESC LIMIT 1
14:33:47 2026-07-07 14:33:47,589 [omego.extern] INFO  Running [current environment]: omero config get --show-password
14:33:47 2026-07-07 14:33:47,589 [omego.extern] INFO  Executing : omero config get --show-password
14:33:53 2026-07-07 14:33:53,017 [omego.extern] INFO  Completed [5.427 s]
14:33:53 2026-07-07 14:33:53,017 [    omego.db] INFO  Failed to lookup parameter omero.db.pass, using omero
14:33:53 2026-07-07 14:33:53,017 [omego.extern] INFO  Executing [custom environment]: psql -v ON_ERROR_STOP=on -d OMERO-server -h pg -U postgres -w -A -t -c SELECT currentversion, currentpatch FROM dbpatch ORDER BY id DESC LIMIT 1
14:33:53 2026-07-07 14:33:53,038 [omego.extern] INFO  Completed [0.021 s]
14:33:53 2026-07-07 14:33:53,038 [    omego.db] DEBUG stdout: b'OMERO5.4|0\n'
14:33:53 2026-07-07 14:33:53,038 [    omego.db] INFO  Current omero db version: ('OMERO5.4', '0')
14:33:53 2026-07-07 14:33:53,105 [    omego.db] INFO  Database is already at OMERO5.4__0
14:33:53 + export LANG=en_US.UTF-8
14:33:53 + LANG=en_US.UTF-8
14:33:53 + export LANGUAGE=en_US:en
14:33:53 + LANGUAGE=en_US:en
14:33:53 + export LC_ALL=en_US.UTF-8
14:33:53 + LC_ALL=en_US.UTF-8
14:33:53 + BUILD_ID=DONT_KILL_ME
14:33:53 + omero admin start
14:34:04 No descriptor given. Using etc/grid/default.xml
14:34:19 Creating /home/omero/workspace/OMERO-server/OMERO.server/var/master
14:34:19 Initializing /home/omero/workspace/OMERO-server/OMERO.server/var/log
14:34:19 Creating /home/omero/workspace/OMERO-server/OMERO.server/var/registry
14:34:19 Waiting on startup. Use CTRL-C to exit
14:34:19 + omero admin waitup
14:34:24 Waiting on startup. Use CTRL-C to exit
14:34:24 + omero admin diagnostics
14:34:34 
14:34:34 ================================================================================
14:34:34 OMERO Diagnostics (admin)
14:34:34 ================================================================================
14:34:34         
14:34:34 Commands:   java -version                  21.0.11   (/usr/bin/java)
14:34:34 Commands:   python -V                      3.11.13   (/home/omero/workspace/OMERO-server/.venv3/bin/python)
14:34:34 Commands:   icegridnode --version          3.6.5     (/opt/ice-3.6.5/bin/icegridnode)
14:34:34 Commands:   icegridadmin --version         3.6.5     (/opt/ice-3.6.5/bin/icegridadmin)
14:34:34 Commands:   psql --version                 16.14     (/usr/bin/psql)
14:34:34 Commands:   openssl version                3.5.527   (/usr/bin/openssl)
14:34:34 
14:34:34 Component:  OMERO.py                       5.22.2.dev0
14:34:34 Component:  OMERO.server                   5.6.3-614-b7d1771417-ice36-b2
14:34:34 
14:34:34 Server:     icegridnode                    running
14:34:34 Server:     Blitz-0                        active (pid = 16415, enabled)
14:34:34 Server:     Indexer-0                      active (pid = 16437, enabled)
14:34:34 Server:     OMERO.Glacier2                 active (pid = 16443, enabled)
14:34:34 Server:     OMERO.IceStorm                 active (pid = 16469, enabled)
14:34:34 Server:     Processor-0                    active (pid = 16459, enabled)
14:34:34 Server:     Tables-0                       active (pid = 16471, enabled)
14:34:34 
14:34:34 Log dir:    /home/omero/workspace/OMERO-server/OMERO.server/var/log exists
14:34:34 Log files:  Blitz-0.log                    145.0 KB      errors=0    warnings=1   
14:34:34 Log files:  DropBox.log                    n/a
14:34:34 Log files:  FileServer.log                 n/a
14:34:34 Log files:  Indexer-0.log                  2.6 KB       
14:34:34 Log files:  MonitorServer.log              n/a
14:34:34 Log files:  Processor-0.log                856 B        
14:34:34 Log files:  Tables-0.log                   1.1 KB       
14:34:34 Log files:  TestDropBox.log                n/a
14:34:34 Log files:  master.err                     empty
14:34:34 Log files:  master.out                     30.5 KB      
14:34:34 Log files:  Total size                     0.18 MB
14:34:34 
14:34:34 
14:34:34 Environment:OMERO_HOME=(unset)             
14:34:34 Environment:OMERODIR=/home/omero/workspace/OMERO-server/OMERO.server 
14:34:34 Environment:OMERO_NODE=(unset)             
14:34:34 Environment:OMERO_MASTER=(unset)           
14:34:34 Environment:OMERO_USERDIR=(unset)          
14:34:34 Environment:OMERO_TMPDIR=(unset)           
14:34:34 Environment:PATH=/home/omero/workspace/OMERO-server/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin 
14:34:34 Environment:PYTHONPATH=(unset)             
14:34:34 Environment:ICE_HOME=/opt/ice-3.6.5        
14:34:34 Environment:LD_LIBRARY_PATH=(unset)        
14:34:34 Environment:DYLD_LIBRARY_PATH=(unset)      
14:34:34 
14:34:34 OMERO SSL port:4064                           
14:34:34 OMERO TCP port:4063                           
14:34:34 OMERO data dir:'/home/omero/omero-server-data' Exists? True	Is writable? True
14:34:34 OMERO temp dir:'/home/omero/omero/tmp'        Exists? True	Is writable? True   (Size: 0)
14:34:34 
14:34:34 JVM settings: Blitz-${index}                -Xmx7200m
14:34:34 JVM settings: Indexer-${index}              -Xmx4800m
14:34:34 JVM settings: PixelData-${index}            -Xmx7200m
14:34:34 JVM settings: Repository-${index}           -Xmx4800m
14:34:34 
14:34:34 Jar:        lib/server/formats-api.jar     Bio-Formats API	8.5.0	18 March 2026	877c317e4e396381dc76e56c1539b24947f71dce
14:34:34 Jar:        lib/server/formats-bsd.jar     BSD Bio-Formats readers and writers	8.5.0	18 March 2026	877c317e4e396381dc76e56c1539b24947f71dce
14:34:34 Jar:        lib/server/formats-gpl.jar     Bio-Formats library	8.5.0	18 March 2026	877c317e4e396381dc76e56c1539b24947f71dce
14:34:34 Jar:        lib/server/ome-codecs.jar      OME Codecs	1.1.3	26 February 2026	70fd9b72a9834f1af4852c1e5b5676c57a2c360e
14:34:34 Jar:        lib/server/ome-common.jar      OME Common Java	6.2.1	27 February 2026	a24fbcbf04a3a3acba14e9575d7fb1d36a484dff
14:34:34 Jar:        lib/server/ome-jai.jar         OME JAI	0.1.5	30 June 2025	257a1c1410c0103485248d05752a5174262a38b6
14:34:34 Jar:        lib/server/ome-mdbtools.jar    MDB Tools (Java port)	5.3.4	25 June 2025	57553b46e5f0cf9aefe5d97d2b1c8dd2073a4d37
14:34:35 Jar:        lib/server/ome-poi.jar         OME POI	5.3.11	11 November 2025	a2f3944ac71db9e7e51a6f64ec46beeb60613afb
14:34:35 Jar:        lib/server/ome-xml.jar         OME XML library	6.5.3	22 January 2026	21d1362abd9ce26e13888d2b2d028753d21ac96e
14:34:35 Jar:        lib/server/omero-blitz.jar     jar	5.8.6-SNAPSHOT		
14:34:35 Jar:        lib/server/omero-common.jar    jar	5.7.6-SNAPSHOT		
14:34:35 Jar:        lib/server/omero-gateway.jar   jar	5.11.1-SNAPSHOT		
14:34:35 Jar:        lib/server/omero-model.jar     jar	5.7.6-SNAPSHOT		
14:34:35 Jar:        lib/server/omero-renderer.jar  jar	5.6.6-SNAPSHOT		
14:34:35 Jar:        lib/server/omero-romio.jar     jar	5.8.6-SNAPSHOT		
14:34:35 Jar:        lib/server/omero-server.jar    jar	5.7.6-SNAPSHOT		
14:34:35 + deactivate
14:34:35 + '[' -n /opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
14:34:35 + PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
14:34:35 + export PATH
14:34:35 + unset _OLD_VIRTUAL_PATH
14:34:35 + '[' -n '' ']'
14:34:35 + hash -r
14:34:35 + '[' -n '' ']'
14:34:35 + unset VIRTUAL_ENV
14:34:35 + unset VIRTUAL_ENV_PROMPT
14:34:35 + '[' '!' '' = nondestructive ']'
14:34:35 + unset -f deactivate
14:34:35 Finished: SUCCESS