02:24:06 Started by upstream project "Trigger" build number 21
02:24:06 originally caused by:
02:24:06 Started by timer
02:24:06 Running as SYSTEM
02:24:06 Building remotely on omero (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-training
02:24:06 [OMERO-training] $ /bin/bash -xe /tmp/jenkins11660185428716557656.sh
02:24:06 + rm -rf /home/omero/workspace/OMERO-training/.venv3
02:25:33 + python3.11 -m venv /home/omero/workspace/OMERO-training/.venv3
02:25:52 + source /home/omero/workspace/OMERO-training/.venv3/bin/activate
02:25:52 ++ deactivate nondestructive
02:25:52 ++ '[' -n '' ']'
02:25:52 ++ '[' -n '' ']'
02:25:52 ++ hash -r
02:25:52 ++ '[' -n '' ']'
02:25:52 ++ unset VIRTUAL_ENV
02:25:52 ++ unset VIRTUAL_ENV_PROMPT
02:25:52 ++ '[' '!' nondestructive = nondestructive ']'
02:25:52 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-training/.venv3
02:25:52 ++ export VIRTUAL_ENV
02:25:52 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
02:25:52 ++ PATH=/home/omero/workspace/OMERO-training/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
02:25:52 ++ export PATH
02:25:52 ++ '[' -n '' ']'
02:25:52 ++ '[' -z '' ']'
02:25:52 ++ _OLD_VIRTUAL_PS1=
02:25:52 ++ PS1='(.venv3) '
02:25:52 ++ export PS1
02:25:52 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
02:25:52 ++ export VIRTUAL_ENV_PROMPT
02:25:52 ++ hash -r
02:25:52 + pip install -U pip setuptools
02:25:53 Requirement already satisfied: pip in ./.venv3/lib64/python3.11/site-packages (22.3.1)
02:25:54 Collecting pip
02:25:54 Using cached pip-26.1.2-py3-none-any.whl (1.8 MB)
02:25:54 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (65.5.1)
02:25:54 Collecting setuptools
02:25:54 Using cached setuptools-83.0.0-py3-none-any.whl (1.0 MB)
02:25:54 Installing collected packages: setuptools, pip
02:25:54 Attempting uninstall: setuptools
02:25:54 Found existing installation: setuptools 65.5.1
02:25:55 Uninstalling setuptools-65.5.1:
02:25:55 Successfully uninstalled setuptools-65.5.1
02:26:05 Attempting uninstall: pip
02:26:05 Found existing installation: pip 22.3.1
02:26:06 Uninstalling pip-22.3.1:
02:26:06 Successfully uninstalled pip-22.3.1
02:26:19 Successfully installed pip-26.1.2 setuptools-83.0.0
02:26:19 + pip install https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl
02:26:20 Collecting zeroc-ice==3.6.5
02:26:20 Downloading zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl (37.3 MB)
02:26:23 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 37.3/37.3 MB 13.7 MB/s 0:00:02
02:26:23 Installing collected packages: zeroc-ice
02:26:26 Successfully installed zeroc-ice-3.6.5
02:26:26 + pip install markdown
02:26:27 Collecting markdown
02:26:27 Using cached markdown-3.10.2-py3-none-any.whl.metadata (5.1 kB)
02:26:27 Using cached markdown-3.10.2-py3-none-any.whl (108 kB)
02:26:27 Installing collected packages: markdown
02:26:28 Successfully installed markdown-3.10.2
02:26:28 + pip install mox3 pytest 'pytest-xdist<2'
02:26:29 Collecting mox3
02:26:29 Using cached mox3-1.1.0-py3-none-any.whl.metadata (3.2 kB)
02:26:29 Collecting pytest
02:26:29 Using cached pytest-9.1.1-py3-none-any.whl.metadata (7.6 kB)
02:26:29 Collecting pytest-xdist<2
02:26:29 Using cached pytest_xdist-1.34.0-py2.py3-none-any.whl.metadata (14 kB)
02:26:29 Collecting execnet>=1.1 (from pytest-xdist<2)
02:26:29 Using cached execnet-2.1.2-py3-none-any.whl.metadata (2.9 kB)
02:26:29 Collecting pytest-forked (from pytest-xdist<2)
02:26:29 Using cached pytest_forked-1.6.0-py3-none-any.whl.metadata (3.5 kB)
02:26:29 Collecting six (from pytest-xdist<2)
02:26:29 Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB)
02:26:29 Collecting pbr!=2.1.0,>=2.0.0 (from mox3)
02:26:30 Using cached pbr-7.0.3-py2.py3-none-any.whl.metadata (3.8 kB)
02:26:30 Collecting fixtures>=3.0.0 (from mox3)
02:26:30 Using cached fixtures-4.3.2-py3-none-any.whl.metadata (22 kB)
02:26:30 Collecting iniconfig>=1.0.1 (from pytest)
02:26:30 Using cached iniconfig-2.3.0-py3-none-any.whl.metadata (2.5 kB)
02:26:30 Collecting packaging>=22 (from pytest)
02:26:30 Using cached packaging-26.2-py3-none-any.whl.metadata (3.5 kB)
02:26:30 Collecting pluggy<2,>=1.5 (from pytest)
02:26:30 Using cached pluggy-1.6.0-py3-none-any.whl.metadata (4.8 kB)
02:26:30 Collecting pygments>=2.7.2 (from pytest)
02:26:30 Using cached pygments-2.20.0-py3-none-any.whl.metadata (2.5 kB)
02:26:30 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from pbr!=2.1.0,>=2.0.0->mox3) (83.0.0)
02:26:30 Collecting py (from pytest-forked->pytest-xdist<2)
02:26:30 Using cached py-1.11.0-py2.py3-none-any.whl.metadata (2.8 kB)
02:26:30 Using cached pytest_xdist-1.34.0-py2.py3-none-any.whl (36 kB)
02:26:30 Using cached mox3-1.1.0-py3-none-any.whl (43 kB)
02:26:30 Using cached pytest-9.1.1-py3-none-any.whl (386 kB)
02:26:30 Using cached pluggy-1.6.0-py3-none-any.whl (20 kB)
02:26:30 Using cached execnet-2.1.2-py3-none-any.whl (40 kB)
02:26:30 Using cached fixtures-4.3.2-py3-none-any.whl (41 kB)
02:26:30 Using cached iniconfig-2.3.0-py3-none-any.whl (7.5 kB)
02:26:30 Using cached packaging-26.2-py3-none-any.whl (100 kB)
02:26:30 Using cached pbr-7.0.3-py2.py3-none-any.whl (131 kB)
02:26:30 Using cached pygments-2.20.0-py3-none-any.whl (1.2 MB)
02:26:30 Using cached pytest_forked-1.6.0-py3-none-any.whl (4.9 kB)
02:26:30 Using cached py-1.11.0-py2.py3-none-any.whl (98 kB)
02:26:30 Using cached six-1.17.0-py2.py3-none-any.whl (11 kB)
02:26:30 Installing collected packages: six, pygments, py, pluggy, pbr, packaging, iniconfig, fixtures, execnet, pytest, mox3, pytest-forked, pytest-xdist
02:26:45
02:26:45 Successfully installed execnet-2.1.2 fixtures-4.3.2 iniconfig-2.3.0 mox3-1.1.0 packaging-26.2 pbr-7.0.3 pluggy-1.6.0 py-1.11.0 pygments-2.20.0 pytest-9.1.1 pytest-forked-1.6.0 pytest-xdist-1.34.0 six-1.17.0
02:26:45 + pip install tables
02:26:46 Collecting tables
02:26:46 Using cached tables-3.11.1-cp311-abi3-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.1 kB)
02:26:46 Collecting numpy>=1.20.0 (from tables)
02:26:46 Using cached numpy-2.4.6-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (6.6 kB)
02:26:46 Collecting numexpr>=2.6.2 (from tables)
02:26:46 Using cached numexpr-2.14.2-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (9.0 kB)
02:26:46 Requirement already satisfied: packaging in ./.venv3/lib64/python3.11/site-packages (from tables) (26.2)
02:26:46 Collecting py-cpuinfo (from tables)
02:26:46 Using cached py_cpuinfo-9.0.0-py3-none-any.whl.metadata (794 bytes)
02:26:47 Collecting blosc2>=2.3.0 (from tables)
02:26:47 Using cached blosc2-4.9.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (7.8 kB)
02:26:47 Collecting ndindex (from blosc2>=2.3.0->tables)
02:26:47 Using cached ndindex-1.10.1-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl.metadata (3.6 kB)
02:26:47 Collecting msgpack (from blosc2>=2.3.0->tables)
02:26:47 Using cached msgpack-1.2.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (8.3 kB)
02:26:47 Collecting pydantic (from blosc2>=2.3.0->tables)
02:26:47 Using cached pydantic-2.13.4-py3-none-any.whl.metadata (109 kB)
02:26:47 Collecting httpx[http2] (from blosc2>=2.3.0->tables)
02:26:47 Using cached httpx-0.28.1-py3-none-any.whl.metadata (7.1 kB)
02:26:47 Collecting rich (from blosc2>=2.3.0->tables)
02:26:47 Using cached rich-15.0.0-py3-none-any.whl.metadata (18 kB)
02:26:47 Collecting threadpoolctl (from blosc2>=2.3.0->tables)
02:26:47 Using cached threadpoolctl-3.6.0-py3-none-any.whl.metadata (13 kB)
02:26:47 Collecting anyio (from httpx[http2]->blosc2>=2.3.0->tables)
02:26:47 Using cached anyio-4.14.2-py3-none-any.whl.metadata (4.6 kB)
02:26:47 Collecting certifi (from httpx[http2]->blosc2>=2.3.0->tables)
02:26:47 Using cached certifi-2026.6.17-py3-none-any.whl.metadata (2.5 kB)
02:26:47 Collecting httpcore==1.* (from httpx[http2]->blosc2>=2.3.0->tables)
02:26:47 Using cached httpcore-1.0.9-py3-none-any.whl.metadata (21 kB)
02:26:47 Collecting idna (from httpx[http2]->blosc2>=2.3.0->tables)
02:26:47 Using cached idna-3.18-py3-none-any.whl.metadata (6.1 kB)
02:26:47 Collecting h2<5,>=3 (from httpx[http2]->blosc2>=2.3.0->tables)
02:26:47 Using cached h2-4.3.0-py3-none-any.whl.metadata (5.1 kB)
02:26:47 Collecting hyperframe<7,>=6.1 (from h2<5,>=3->httpx[http2]->blosc2>=2.3.0->tables)
02:26:47 Using cached hyperframe-6.1.0-py3-none-any.whl.metadata (4.3 kB)
02:26:47 Collecting hpack<5,>=4.1 (from h2<5,>=3->httpx[http2]->blosc2>=2.3.0->tables)
02:26:47 Using cached hpack-4.2.0-py3-none-any.whl.metadata (3.3 kB)
02:26:48 Collecting h11>=0.16 (from httpcore==1.*->httpx[http2]->blosc2>=2.3.0->tables)
02:26:48 Using cached h11-0.16.0-py3-none-any.whl.metadata (8.3 kB)
02:26:48 Collecting typing_extensions>=4.5 (from anyio->httpx[http2]->blosc2>=2.3.0->tables)
02:26:48 Using cached typing_extensions-4.16.0-py3-none-any.whl.metadata (3.3 kB)
02:26:48 Collecting annotated-types>=0.6.0 (from pydantic->blosc2>=2.3.0->tables)
02:26:48 Using cached annotated_types-0.7.0-py3-none-any.whl.metadata (15 kB)
02:26:48 Collecting pydantic-core==2.46.4 (from pydantic->blosc2>=2.3.0->tables)
02:26:48 Using cached pydantic_core-2.46.4-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB)
02:26:48 Collecting typing-inspection>=0.4.2 (from pydantic->blosc2>=2.3.0->tables)
02:26:48 Using cached typing_inspection-0.4.2-py3-none-any.whl.metadata (2.6 kB)
02:26:48 Collecting markdown-it-py>=2.2.0 (from rich->blosc2>=2.3.0->tables)
02:26:49 Using cached markdown_it_py-4.2.0-py3-none-any.whl.metadata (7.4 kB)
02:26:49 Requirement already satisfied: pygments<3.0.0,>=2.13.0 in ./.venv3/lib64/python3.11/site-packages (from rich->blosc2>=2.3.0->tables) (2.20.0)
02:26:49 Collecting mdurl~=0.1 (from markdown-it-py>=2.2.0->rich->blosc2>=2.3.0->tables)
02:26:49 Using cached mdurl-0.1.2-py3-none-any.whl.metadata (1.6 kB)
02:26:49 Using cached tables-3.11.1-cp311-abi3-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (7.2 MB)
02:26:49 Using cached blosc2-4.9.1-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (7.3 MB)
02:26:49 Using cached numexpr-2.14.2-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (443 kB)
02:26:49 Using cached numpy-2.4.6-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (16.9 MB)
02:26:49 Using cached httpx-0.28.1-py3-none-any.whl (73 kB)
02:26:49 Using cached h2-4.3.0-py3-none-any.whl (61 kB)
02:26:49 Using cached hpack-4.2.0-py3-none-any.whl (34 kB)
02:26:49 Using cached httpcore-1.0.9-py3-none-any.whl (78 kB)
02:26:49 Using cached hyperframe-6.1.0-py3-none-any.whl (13 kB)
02:26:49 Using cached h11-0.16.0-py3-none-any.whl (37 kB)
02:26:49 Using cached anyio-4.14.2-py3-none-any.whl (125 kB)
02:26:49 Using cached idna-3.18-py3-none-any.whl (65 kB)
02:26:49 Using cached typing_extensions-4.16.0-py3-none-any.whl (45 kB)
02:26:49 Using cached certifi-2026.6.17-py3-none-any.whl (133 kB)
02:26:49 Using cached msgpack-1.2.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (423 kB)
02:26:49 Using cached ndindex-1.10.1-cp311-cp311-manylinux_2_24_x86_64.manylinux_2_28_x86_64.whl (516 kB)
02:26:49 Using cached py_cpuinfo-9.0.0-py3-none-any.whl (22 kB)
02:26:49 Using cached pydantic-2.13.4-py3-none-any.whl (472 kB)
02:26:49 Using cached pydantic_core-2.46.4-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (2.1 MB)
02:26:49 Using cached annotated_types-0.7.0-py3-none-any.whl (13 kB)
02:26:49 Using cached typing_inspection-0.4.2-py3-none-any.whl (14 kB)
02:26:49 Using cached rich-15.0.0-py3-none-any.whl (310 kB)
02:26:49 Using cached markdown_it_py-4.2.0-py3-none-any.whl (91 kB)
02:26:49 Using cached mdurl-0.1.2-py3-none-any.whl (10.0 kB)
02:26:49 Using cached threadpoolctl-3.6.0-py3-none-any.whl (18 kB)
02:26:49 Installing collected packages: py-cpuinfo, typing_extensions, threadpoolctl, numpy, ndindex, msgpack, mdurl, idna, hyperframe, hpack, h11, certifi, annotated-types, typing-inspection, pydantic-core, numexpr, markdown-it-py, httpcore, h2, anyio, rich, pydantic, httpx, blosc2, tables
02:27:25
02:27:25 Successfully installed annotated-types-0.7.0 anyio-4.14.2 blosc2-4.9.1 certifi-2026.6.17 h11-0.16.0 h2-4.3.0 hpack-4.2.0 httpcore-1.0.9 httpx-0.28.1 hyperframe-6.1.0 idna-3.18 markdown-it-py-4.2.0 mdurl-0.1.2 msgpack-1.2.1 ndindex-1.10.1 numexpr-2.14.2 numpy-2.4.6 py-cpuinfo-9.0.0 pydantic-2.13.4 pydantic-core-2.46.4 rich-15.0.0 tables-3.11.1 threadpoolctl-3.6.0 typing-inspection-0.4.2 typing_extensions-4.16.0
02:27:25 + pip install jinja2
02:27:26 Collecting jinja2
02:27:26 Using cached jinja2-3.1.6-py3-none-any.whl.metadata (2.9 kB)
02:27:26 Collecting MarkupSafe>=2.0 (from jinja2)
02:27:26 Using cached markupsafe-3.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.7 kB)
02:27:26 Using cached jinja2-3.1.6-py3-none-any.whl (134 kB)
02:27:26 Using cached markupsafe-3.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (22 kB)
02:27:27 Installing collected packages: MarkupSafe, jinja2
02:27:27
02:27:27 Successfully installed MarkupSafe-3.0.3 jinja2-3.1.6
02:27:27 + rm -rf /home/omero/workspace/OMERO-training/omero-blitz-5.8.6-SNAPSHOT-python.zip /home/omero/workspace/OMERO-training/omero_dropbox-5.7.1.dev0.tar.gz /home/omero/workspace/OMERO-training/omero_marshal-0.9.2.dev0.tar.gz /home/omero/workspace/OMERO-training/omero_py-5.22.2.dev0.tar.gz /home/omero/workspace/OMERO-training/omero_scripts-5.10.1.dev0.tar.gz /home/omero/workspace/OMERO-training/OMERO.server /home/omero/workspace/OMERO-training/omero_web-5.32.1.dev0.tar.gz /home/omero/workspace/OMERO-training/openmicroscopy /home/omero/workspace/OMERO-training/version.properties
02:27:37 Copied 5 artifacts from "OMERO-python-superbuild-build" build number 12
02:27:40 Copied 2 artifacts from "OMERO-build" build number 13
02:27:40 Copied 2 artifacts from "OMERO-build-build" build number 23
02:27:40 [OMERO-training] $ /bin/bash -xe /tmp/jenkins1113269272312488179.sh
02:27:40 + source /home/settings.env
02:27:40 ++ OMERO_DB_HOST=pg
02:27:40 ++ OMERO_DB_USER=postgres
02:27:40 ++ OMERO_DB_PASS=
02:27:40 ++ OMERO_ROOT_PASS=omero
02:27:40 ++ OMERO_DATA_DIR=/OMERO
02:27:40 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
02:27:40 + export ZIP_FILE=/home/omero/workspace/OMERO-training/omero-blitz-VERSION-python.zip
02:27:40 + ZIP_FILE=/home/omero/workspace/OMERO-training/omero-blitz-VERSION-python.zip
02:27:40 + export VERSION_PROPERTIES=/home/omero/workspace/OMERO-training/version.properties
02:27:40 + VERSION_PROPERTIES=/home/omero/workspace/OMERO-training/version.properties
02:27:40 + OMERO_EXAMPLE_DIST=/home/omero/workspace/OMERO-training/openmicroscopy
02:27:40 ++ ls openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13.zip
02:27:40 + ZIP=openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13.zip
02:27:40 + DIST=openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13
02:27:40 + unzip -n openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13.zip
02:27:40 Archive: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13.zip
02:27:40 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/
02:27:40 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/.classpath-template
02:27:40 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/.github/
02:27:40 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/.github/Pull_Request_Template.md
02:27:40 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/.github/workflows/
02:27:40 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/.github/workflows/docker_build.yml
02:27:40 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/.github/workflows/release.yml
02:27:40 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/.github/workflows/source_build.yml
02:27:40 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/.github/workflows/update.yaml
02:27:40 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/.mailmap
02:27:40 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/.project
02:27:40 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/CMakeLists.txt
02:27:40 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/CONTRIBUTING.md
02:27:40 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/Dockerfile
02:27:40 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/LICENSE.txt
02:27:40 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/README.md
02:27:40 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/SUPPORT.md
02:27:40 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/build.bat
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02:27:40 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tests/ui/resources/robot.template
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02:27:40 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tests/ui/resources/web/annotation.txt
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02:27:40 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tests/ui/testcases/web/annotate_test.robot
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02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tests/ui/testcases/web/webadmin_user_settings.robot
02:27:41 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/
02:27:41 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/CMakeLists.txt
02:27:41 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/cmake/
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/cmake/CompilerChecks.cmake
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/cmake/FindIce.cmake
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/cmake/GTest.cmake
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02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/cmake/Version.cmake
02:27:41 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/
02:27:41 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/CHANGES
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02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/CONTRIBUTORS
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/LICENSE
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/README
02:27:41 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/cmake/
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/cmake/internal_utils.cmake
02:27:41 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/include/
02:27:41 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest-death-test.h
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest-message.h
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest-param-test.h
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest-param-test.h.pump
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest-printers.h
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest-spi.h
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest-test-part.h
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest-typed-test.h
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest.h
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest_pred_impl.h
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/gtest_prod.h
02:27:41 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-death-test-internal.h
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-filepath.h
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-internal.h
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-linked_ptr.h
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-param-util-generated.h
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-param-util-generated.h.pump
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-param-util.h
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-port.h
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-string.h
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-tuple.h
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-tuple.h.pump
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-type-util.h
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/include/gtest/internal/gtest-type-util.h.pump
02:27:41 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/prime_tables.h
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample1.cc
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample1.h
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample10_unittest.cc
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample1_unittest.cc
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample2.cc
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample2.h
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample2_unittest.cc
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample3-inl.h
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample3_unittest.cc
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample4.cc
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample4.h
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample4_unittest.cc
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample5_unittest.cc
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample6_unittest.cc
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample7_unittest.cc
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample8_unittest.cc
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/samples/sample9_unittest.cc
02:27:41 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/scripts/
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/scripts/fuse_gtest_files.py
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/scripts/gen_gtest_pred_impl.py
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/scripts/gtest-config.in
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/scripts/pump.py
02:27:41 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/scripts/test/
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/scripts/test/Makefile
02:27:41 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/src/
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/src/gtest-all.cc
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/src/gtest-death-test.cc
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/src/gtest-filepath.cc
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/src/gtest-internal-inl.h
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/src/gtest-port.cc
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/src/gtest-printers.cc
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/src/gtest-test-part.cc
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/src/gtest-typed-test.cc
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/src/gtest.cc
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/src/gtest_main.cc
02:27:41 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-death-test_ex_test.cc
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-death-test_test.cc
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-filepath_test.cc
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-linked_ptr_test.cc
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-listener_test.cc
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-message_test.cc
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-options_test.cc
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-param-test2_test.cc
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-param-test_test.cc
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-param-test_test.h
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-port_test.cc
02:27:41 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-printers_test.cc
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-test-part_test.cc
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-tuple_test.cc
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-typed-test2_test.cc
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-typed-test_test.cc
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-typed-test_test.h
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest-unittest-api_test.cc
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_all_test.cc
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_break_on_failure_unittest.py
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_break_on_failure_unittest_.cc
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_catch_exceptions_test.py
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_catch_exceptions_test_.cc
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_color_test.py
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_color_test_.cc
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_env_var_test.py
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_env_var_test_.cc
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_environment_test.cc
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_filter_unittest.py
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_filter_unittest_.cc
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_help_test.py
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_help_test_.cc
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_list_tests_unittest.py
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_list_tests_unittest_.cc
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_main_unittest.cc
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_no_test_unittest.cc
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_output_test.py
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_output_test_.cc
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_output_test_golden_lin.txt
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_pred_impl_unittest.cc
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_premature_exit_test.cc
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_prod_test.cc
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_repeat_test.cc
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_shuffle_test.py
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_shuffle_test_.cc
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_sole_header_test.cc
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_stress_test.cc
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_test_utils.py
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_throw_on_failure_ex_test.cc
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_throw_on_failure_test.py
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_throw_on_failure_test_.cc
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_uninitialized_test.py
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_uninitialized_test_.cc
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_unittest.cc
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_xml_outfile1_test_.cc
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_xml_outfile2_test_.cc
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_xml_outfiles_test.py
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_xml_output_unittest.py
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_xml_output_unittest_.cc
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/gtest_xml_test_utils.py
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/production.cc
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/ext/gtest-1.7.0/test/production.h
02:27:42 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/README.h
02:27:42 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/ClientErrors.cpp
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/ClientErrors.h
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/IceNoWarnPop.h
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/IceNoWarnPush.h
02:27:42 extracting: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/IcePortPop.h
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/IcePortPush.h
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/ObjectFactory.cpp
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/ObjectFactory.h
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/ObjectFactoryRegistrar.cpp
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/ObjectFactoryRegistrar.h
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/RTypesI.cpp
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/RTypesI.h
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/all.h
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/callbacks.cpp
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/callbacks.h
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/client.cpp
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/client.h
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/clientF.cpp
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/clientF.h
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/conversions.cpp
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/conversions.h
02:27:42 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/internal/
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/internal/fixes.h
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/min.h
02:27:42 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/model/
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/model/DetailsI.cpp
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/model/DetailsI.h
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/model/ElectricPotentialI.cpp
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/model/ElectricPotentialI.h
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/model/FrequencyI.cpp
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/model/FrequencyI.h
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/model/LengthI.cpp
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/model/LengthI.h
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/model/ObjectFactory.h
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/model/PermissionsI.cpp
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/model/PermissionsI.h
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/model/PowerI.cpp
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/model/PowerI.h
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/model/PressureI.cpp
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/model/PressureI.h
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/model/TemperatureI.cpp
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/model/TemperatureI.h
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/model/TimeI.cpp
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/model/TimeI.h
02:27:42 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/sys/
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/sys/ParametersI.cpp
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/sys/ParametersI.h
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/templates.h
02:27:42 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/util/
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/util/concurrency.cpp
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/util/concurrency.h
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/util/tiles.cpp
02:27:42 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/src/omero/util/tiles.h
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02:27:43 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/test/CMakeLists.txt
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02:27:43 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/test/integration/admin.cpp
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02:27:43 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/test/integration/beta3.cpp
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02:27:43 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/test/integration/delete.cpp
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02:27:43 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/test/integration/mapannotation.cpp
02:27:43 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/test/integration/model51.cpp
02:27:43 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/test/integration/permissions.cpp
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02:27:43 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/test/integration/sessions.cpp
02:27:43 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/test/main.cpp
02:27:43 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/test/omero/
02:27:43 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/test/omero/CMakeLists.txt
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02:27:43 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/test/safegtest.h
02:27:43 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/test/unit/
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02:27:43 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/test/unit/client.cpp
02:27:43 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/test/unit/concurrency.cpp
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02:27:43 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/test/unit/perms.cpp
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02:27:43 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/test/unit/units.cpp
02:27:43 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/utils/
02:27:43 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/utils/CMakeLists.txt
02:27:43 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/utils/chgrp.cpp
02:27:43 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroFS/
02:27:43 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroFS/build.xml
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02:27:43 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroFS/setup.py
02:27:43 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroFS/test/
02:27:43 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroFS/test/drivers.py
02:27:43 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroFS/test/integration/
02:27:43 extracting: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroFS/test/integration/__init__.py
02:27:43 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroFS/test/integration/test_dbclient.py
02:27:43 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroFS/test/records/
02:27:43 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroFS/test/records/first.txt
02:27:43 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroFS/test/records/outofsync.txt
02:27:43 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/
02:27:43 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/.classpath-template
02:27:43 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/.project
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02:27:43 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/ivy.xml
02:27:43 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/resources/
02:27:43 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/settings.gradle
02:27:43 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test.xml
02:27:43 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/
02:27:43 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/fs.testng.xml
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02:27:43 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/
02:27:43 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/AbstractServerImportTest.java
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02:27:43 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java
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02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/ResetPasswordTest.java
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02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/UpgradeCheckTest.java
02:27:44 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/chgrp/
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/chgrp/AnnotationMoveTest.java
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveAndPermissionsTest.java
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveCombinedDataTest.java
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveDatasetTest.java
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveImageWithAcquisitionDataTest.java
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveImageWithRoiFromOtherUserTest.java
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveImageWithRoiTest.java
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveTest.java
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02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/chgrp/RenderingSettingsMoveTest.java
02:27:44 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/chmod/
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/chmod/PermissionsTest.java
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02:27:44 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/chown/
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/chown/PermissionsTest.java
02:27:44 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/delete/
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/delete/AdditionalDeleteTest.java
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02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/delete/SpwDeleteTest.java
02:27:44 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/gateway/
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/gateway/AdminFacilityTest.java
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/gateway/BrowseFacilityTest.java
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/gateway/DataManagerFacilityTest.java
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/gateway/GatewayTest.java
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/gateway/GatewayUsageTest.java
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/gateway/LoadFacilityTest.java
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/gateway/MetadataFacilityTest.java
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/gateway/ROIFacilityTest.java
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/gateway/RawDataFacilityTest.java
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/gateway/SearchFacilityTest.java
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/gateway/TablesFacilityTest.java
02:27:44 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/thumbnail/
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/thumbnail/BatchLoadingTest.java
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/thumbnail/SingleFileTest.java
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/thumbnail/SkipThumbnailsPermissionsTest.java
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroJava/test/integration/thumbnail/Utils.java
02:27:44 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/
02:27:44 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/bin/
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/bin/omero
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02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/bin/setpythonpath.bat
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/bin/winconfig.bat
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/build.xml
02:27:44 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/examples/
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/examples/createSession.py
02:27:44 extracting: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/examples/load.omero
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/examples/projection_1.py
02:27:44 extracting: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/examples/submit.omero
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/examples/upload.omero
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/ice.config
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/ivy.xml
02:27:44 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/manualtests/
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/manualtests/README.txt
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/manualtests/populate_roi_test.py
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/setup.py
02:27:44 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/
02:27:44 extracting: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/__init__.py
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/conftest.py
02:27:44 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/
02:27:44 extracting: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/__init__.py
02:27:44 extracting: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/client_ctors.cfg
02:27:44 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/clitest/
02:27:44 extracting: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/clitest/__init__.py
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/clitest/cli.py
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/clitest/test_admin.py
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/clitest/test_chgrp.py
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/clitest/test_chown.py
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02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/clitest/test_db.py
02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/clitest/test_delete.py
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02:27:44 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/clitest/test_import_bulk.py
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02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/clitest/test_pyramids.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/clitest/test_script.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/clitest/test_search.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/clitest/test_sessions.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/clitest/test_tag.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/clitest/test_upload.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/clitest/test_user.py
02:27:45 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/fstest/
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/fstest/test_rename.py
02:27:45 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/gatewaytest/
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/gatewaytest/__init__.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/gatewaytest/test_annotation.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/gatewaytest/test_chgrp.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/gatewaytest/test_chmod.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/gatewaytest/test_chown.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/gatewaytest/test_config_service.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/gatewaytest/test_connection.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/gatewaytest/test_delete.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/gatewaytest/test_fs.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/gatewaytest/test_get_objects.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/gatewaytest/test_helpers.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/gatewaytest/test_image.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/gatewaytest/test_image_wrapper.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/gatewaytest/test_missing_pyramid.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/gatewaytest/test_multi_group.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/gatewaytest/test_performance.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/gatewaytest/test_permissions.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/gatewaytest/test_pixels.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/gatewaytest/test_plate_wrapper.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/gatewaytest/test_rdefs.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/gatewaytest/test_search_objects.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/gatewaytest/test_services.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/gatewaytest/test_ticket10618.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/gatewaytest/test_user.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/gatewaytest/test_wrapper.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/helpers.py
02:27:45 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/metadata/
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/metadata/bulk_to_map_annotation_context.yml
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/metadata/bulk_to_map_annotation_context_ns.csv
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/metadata/bulk_to_map_annotation_context_ns.yml
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/metadata/bulk_to_map_annotation_context_ns2.yml
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/metadata/bulk_to_map_annotation_context_ns2_empty.yml
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/metadata/bulk_to_map_annotation_context_ns2_fail.yml
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/metadata/test_metadata_mapannotations.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/metadata/test_populate.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/metadata/test_pydict_text.py
02:27:45 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/scriptsharness/
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/scriptsharness/definition.cfg
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02:27:45 extracting: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/scriptsharness/simple_script.cfg
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/scriptsharness/simple_script.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/scriptsharness/test_harness.py
02:27:45 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/scriptstest/
02:27:45 extracting: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/scriptstest/__init__.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/scriptstest/script.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/scriptstest/test_cli.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/scriptstest/test_coverage.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/scriptstest/test_inputs.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/scriptstest/test_ping.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/scriptstest/test_rand.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/scriptstest/test_repo.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/scriptstest/test_roi_handling_utils.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/scriptstest/test_script_utils.py
02:27:45 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/tablestest/
02:27:45 extracting: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/tablestest/service-reference-dev_4_4_5.h5.bz2
02:27:45 extracting: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/tablestest/service-reference-dev_5_3_4.h5.bz2
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/tablestest/test_backwards_compatibility.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/tablestest/test_populate_metadata.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/tablestest/test_service.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/tablestest/test_tables.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/test_admin.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/test_annotation.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/test_annotationPermissions.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/test_chgrp.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/test_chmod.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/test_chown.py
02:27:45 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroPy/test/integration/test_client_ctors.py
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02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/fire.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/glasbey.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/glasbey_inverted.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/glow.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/grays.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/ice.lut
02:27:51 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/janelia/
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/janelia/pup_br.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/janelia/pup_nr.lut
02:27:51 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/matplotlib/
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/matplotlib/inferno.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/matplotlib/magma.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/matplotlib/plasma.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/matplotlib/viridis.lut
02:27:51 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/ncsa_paledit/
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/ncsa_paledit/16_colors.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/ncsa_paledit/5_ramps.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/ncsa_paledit/6_shades.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/ncsa_paledit/blue_orange_icb.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/ncsa_paledit/brgbcmyw.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/ncsa_paledit/cool.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/ncsa_paledit/edges.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/ncsa_paledit/gem.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/ncsa_paledit/phase.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/ncsa_paledit/royal.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/ncsa_paledit/sepia.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/ncsa_paledit/smart.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/ncsa_paledit/thal.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/ncsa_paledit/thallium.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/ncsa_paledit/unionjack.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/physics.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/red-green.lut
02:27:51 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/seaborn/
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/seaborn/mako.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/seaborn/rocket.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/spectrum.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/thermal.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/turbo.lut
02:27:51 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/wcif/
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/wcif/cyan_hot.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/wcif/green_fire_blue.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/wcif/hilo.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/wcif/ica.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/wcif/ica2.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/wcif/ica3.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/wcif/magenta_hot.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/wcif/orange_hot.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/wcif/rainbow_rgb.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/wcif/red_hot.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/luts/wcif/yellow_hot.lut
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/omero.class
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/setup.cfg
02:27:51 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/README.txt
02:27:51 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/misc/
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/misc/Makefile
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/misc/current.sql
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/misc/enums.py
02:27:51 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/
02:27:51 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO3A__1/
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO3A__1/OMERO3__7.sql
02:27:51 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO3A__10/
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO3A__10/OMERO3A__9.sql
02:27:51 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO3A__11/
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO3A__11/OMERO3A__10.sql
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO3A__11/OMERO3A__5.sql
02:27:51 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO3A__2/
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO3A__2/OMERO3A__1.sql
02:27:51 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO3A__3/
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO3A__3/OMERO3A__2.sql
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO3A__3/OMERO3__5.sql
02:27:51 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO3A__4/
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO3A__4/OMERO3A__3.sql
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO3A__4/OMERO3__5.sql
02:27:51 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO3A__5/
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO3A__5/OMERO3A__4.sql
02:27:51 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO3A__6/
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO3A__6/OMERO3A__5.sql
02:27:51 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO3A__7/
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO3A__7/OMERO3A__6.sql
02:27:51 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO3A__8/
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO3A__8/OMERO3A__6.sql
02:27:51 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO3A__9/
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO3A__9/OMERO3A__8.sql
02:27:51 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO3__4/
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO3__4/OMERO3__1.sql
02:27:51 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO3__5/
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO3__5/OMERO3__4.sql
02:27:51 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO3__6/
02:27:51 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO3__6/OMERO3__5.sql
02:27:52 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO3__7/
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO3__7/OMERO3__6.sql
02:27:52 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO4.1__0/
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO4.1__0/OMERO4__0.sql
02:27:52 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO4.2__0/
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO4.2__0/OMERO4.1__0.sql
02:27:52 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO4.2__0/t/
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO4.2__0/t/OMERO4.1__0.py
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO4.2__0/t/OMERO4.1__0.test
02:27:52 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO4.3__0/
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO4.3__0/OMERO4.2__0.sql
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO4.3__0/omero-4.2-data-fix.sql
02:27:52 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO4.4__0/
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO4.4__0/OMERO4.1__0.sql
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO4.4__0/OMERO4.3__0.sql
02:27:52 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO4__0/
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO4__0/OMERO3A__11.sql
02:27:52 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.0__0/
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-fix.sql
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-list.sql
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.0__0/OMERO4.4__0.sql
02:27:52 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.1__1/
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.1__1/OMERO5.0__0.sql
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.1__1/OMERO5.1-delete-and-disable-shares.sql
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.1__1/OMERO5.1-enable-shares.sql
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.1__1/OMERO5.1__0.sql
02:27:52 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.2__0/
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.2__0/OMERO5.1__1.sql
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.2__0/OMERO5.2-delete-and-disable-shares.sql
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.2__0/OMERO5.2-enable-shares.sql
02:27:52 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.3__0/
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.3__0/OMERO5.2__0-precheck.sql
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.3__0/OMERO5.2__0.sql
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.3__0/OMERO5.3-index-files.sql
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.3__0/delete-ns-orphans.sql
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.3__0/reverse_shape_color_argb_to_rgba.sql
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.3__0/shape_color_argb_to_rgba.sql
02:27:52 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.4DEV__1/
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.4DEV__1/OMERO5.4DEV__0.sql
02:27:52 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.4DEV__2/
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.4DEV__2/OMERO5.4DEV__1.sql
02:27:52 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.4DEV__3/
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.4DEV__3/OMERO5.4DEV__2.sql
02:27:52 creating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.4__0/
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.4__0/OMERO5.3__0-precheck.sql
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.4__0/OMERO5.3__0.sql
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.4__0/OMERO5.3__1-precheck.sql
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.4__0/OMERO5.3__1.sql
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.4__0/OMERO5.4DEV__3.sql
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.4__0/allow-guest-user-without-password.sql
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.4__0/psql-footer.sql
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.4__0/psql-header.sql
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.4__0/schema.sql
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.4__0/views.sql
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/test.xml
02:27:52 inflating: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/update_dependencies.sh
02:27:52 extracting: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/antlib/resources/gitversion.xml
02:27:52 extracting: openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13/components/tools/OmeroCpp/cmake/GitVersion.cmake
02:27:53 + rm -f openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13.zip
02:27:53 + mv /home/omero/workspace/OMERO-training/openmicroscopy-5.6.3-627-05c9d1bf8e-ice36-b13 /home/omero/workspace/OMERO-training/openmicroscopy
02:27:53 + export OMERODIR=/home/omero/workspace/OMERO-training/OMERO.server
02:27:53 + OMERODIR=/home/omero/workspace/OMERO-training/OMERO.server
02:27:53 ++ ls OMERO.server-5.6.3-627-05c9d1bf8e-ice36-b13.zip
02:27:53 + ZIP=OMERO.server-5.6.3-627-05c9d1bf8e-ice36-b13.zip
02:27:53 + DIST=OMERO.server-5.6.3-627-05c9d1bf8e-ice36-b13
02:27:53 + unzip -n OMERO.server-5.6.3-627-05c9d1bf8e-ice36-b13.zip
02:27:53 Archive: OMERO.server-5.6.3-627-05c9d1bf8e-ice36-b13.zip
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02:28:06 inflating: OMERO.server-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.4__0/schema.sql
02:28:07 inflating: OMERO.server-5.6.3-627-05c9d1bf8e-ice36-b13/sql/psql/OMERO5.4__0/views.sql
02:28:07 + rm -f OMERO.server-5.6.3-627-05c9d1bf8e-ice36-b13.zip
02:28:07 + mv /home/omero/workspace/OMERO-training/OMERO.server-5.6.3-627-05c9d1bf8e-ice36-b13 /home/omero/workspace/OMERO-training/OMERO.server
02:28:07 + source /home/omero/workspace/OMERO-training/.venv3/bin/activate
02:28:07 ++ deactivate nondestructive
02:28:07 ++ '[' -n '' ']'
02:28:07 ++ '[' -n '' ']'
02:28:07 ++ hash -r
02:28:07 ++ '[' -n '' ']'
02:28:07 ++ unset VIRTUAL_ENV
02:28:07 ++ unset VIRTUAL_ENV_PROMPT
02:28:07 ++ '[' '!' nondestructive = nondestructive ']'
02:28:07 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-training/.venv3
02:28:07 ++ export VIRTUAL_ENV
02:28:07 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
02:28:07 ++ PATH=/home/omero/workspace/OMERO-training/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
02:28:07 ++ export PATH
02:28:07 ++ '[' -n '' ']'
02:28:07 ++ '[' -z '' ']'
02:28:07 ++ _OLD_VIRTUAL_PS1=
02:28:07 ++ PS1='(.venv3) '
02:28:07 ++ export PS1
02:28:07 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
02:28:07 ++ export VIRTUAL_ENV_PROMPT
02:28:07 ++ hash -r
02:28:07 + for x in *.gz
02:28:07 + pip install omero_dropbox-5.7.1.dev0.tar.gz
02:28:07 Processing ./omero_dropbox-5.7.1.dev0.tar.gz
02:28:07 Installing build dependencies: started
02:28:09 Installing build dependencies: finished with status 'done'
02:28:09 Getting requirements to build wheel: started
02:28:09 Getting requirements to build wheel: finished with status 'done'
02:28:09 Preparing metadata (pyproject.toml): started
02:28:09 Preparing metadata (pyproject.toml): finished with status 'done'
02:28:10 Collecting omero-py (from omero-dropbox==5.7.1.dev0)
02:28:10 Using cached omero_py-5.22.1-py3-none-any.whl.metadata (6.5 kB)
02:28:10 Collecting appdirs (from omero-py->omero-dropbox==5.7.1.dev0)
02:28:10 Using cached appdirs-1.4.4-py2.py3-none-any.whl.metadata (9.0 kB)
02:28:10 Collecting future (from omero-py->omero-dropbox==5.7.1.dev0)
02:28:10 Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
02:28:10 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.4.6)
02:28:10 Collecting Pillow>=10.0.0 (from omero-py->omero-dropbox==5.7.1.dev0)
02:28:10 Using cached pillow-12.3.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (9.1 kB)
02:28:10 Collecting PyYAML (from omero-py->omero-dropbox==5.7.1.dev0)
02:28:10 Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB)
02:28:10 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.6.5)
02:28:10 Collecting requests (from omero-py->omero-dropbox==5.7.1.dev0)
02:28:10 Using cached requests-2.34.2-py3-none-any.whl.metadata (4.8 kB)
02:28:10 Collecting portalocker (from omero-py->omero-dropbox==5.7.1.dev0)
02:28:10 Using cached portalocker-3.2.0-py3-none-any.whl.metadata (8.7 kB)
02:28:10 Collecting charset_normalizer<4,>=2 (from requests->omero-py->omero-dropbox==5.7.1.dev0)
02:28:10 Using cached charset_normalizer-3.4.9-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (41 kB)
02:28:10 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.18)
02:28:10 Collecting urllib3<3,>=1.26 (from requests->omero-py->omero-dropbox==5.7.1.dev0)
02:28:10 Using cached urllib3-2.7.0-py3-none-any.whl.metadata (6.9 kB)
02:28:10 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2026.6.17)
02:28:10 Using cached omero_py-5.22.1-py3-none-any.whl (2.8 MB)
02:28:10 Using cached pillow-12.3.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (6.9 MB)
02:28:10 Using cached appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB)
02:28:10 Using cached future-1.0.0-py3-none-any.whl (491 kB)
02:28:10 Using cached portalocker-3.2.0-py3-none-any.whl (22 kB)
02:28:10 Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB)
02:28:10 Using cached requests-2.34.2-py3-none-any.whl (73 kB)
02:28:10 Using cached charset_normalizer-3.4.9-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (221 kB)
02:28:10 Using cached urllib3-2.7.0-py3-none-any.whl (131 kB)
02:28:10 Building wheels for collected packages: omero-dropbox
02:28:10 Building wheel for omero-dropbox (pyproject.toml): started
02:28:11 Building wheel for omero-dropbox (pyproject.toml): finished with status 'done'
02:28:11 Created wheel for omero-dropbox: filename=omero_dropbox-5.7.1.dev0-py3-none-any.whl size=49153 sha256=80ca2df23b8214ce7a485f41a29226ac24d5cdc05c19f3f029285e7e99984b71
02:28:11 Stored in directory: /home/omero/.cache/pip/wheels/27/2f/e4/2a907ecffe4660d4c840758e6c0660e7ef9d3bb50ad634b559
02:28:11 Successfully built omero-dropbox
02:28:11 Installing collected packages: appdirs, urllib3, PyYAML, portalocker, Pillow, future, charset_normalizer, requests, omero-py, omero-dropbox
02:28:36
02:28:36 Successfully installed Pillow-12.3.0 PyYAML-6.0.3 appdirs-1.4.4 charset_normalizer-3.4.9 future-1.0.0 omero-dropbox-5.7.1.dev0 omero-py-5.22.1 portalocker-3.2.0 requests-2.34.2 urllib3-2.7.0
02:28:36 + for x in *.gz
02:28:36 + pip install omero_marshal-0.9.2.dev0.tar.gz
02:28:37 Processing ./omero_marshal-0.9.2.dev0.tar.gz
02:28:37 Installing build dependencies: started
02:28:38 Installing build dependencies: finished with status 'done'
02:28:38 Getting requirements to build wheel: started
02:28:39 Getting requirements to build wheel: finished with status 'done'
02:28:39 Preparing metadata (pyproject.toml): started
02:28:39 Preparing metadata (pyproject.toml): finished with status 'done'
02:28:39 Building wheels for collected packages: omero_marshal
02:28:39 Building wheel for omero_marshal (pyproject.toml): started
02:28:39 Building wheel for omero_marshal (pyproject.toml): finished with status 'done'
02:28:39 Created wheel for omero_marshal: filename=omero_marshal-0.9.2.dev0-py3-none-any.whl size=88129 sha256=76807e12a668614d0982996355da9cd77707fc81e8b6440be236bb9e61ffb04f
02:28:39 Stored in directory: /home/omero/.cache/pip/wheels/a7/49/f8/ee97ae6cd0ac1217d15421daf522887b20ca2595964479e97a
02:28:39 Successfully built omero_marshal
02:28:39 Installing collected packages: omero_marshal
02:28:42 Successfully installed omero_marshal-0.9.2.dev0
02:28:42 + for x in *.gz
02:28:42 + pip install omero_py-5.22.2.dev0.tar.gz
02:28:42 Processing ./omero_py-5.22.2.dev0.tar.gz
02:28:43 Installing build dependencies: started
02:28:44 Installing build dependencies: finished with status 'done'
02:28:44 Getting requirements to build wheel: started
02:28:44 Getting requirements to build wheel: finished with status 'done'
02:28:44 Preparing metadata (pyproject.toml): started
02:28:45 Preparing metadata (pyproject.toml): finished with status 'done'
02:28:45 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (1.4.4)
02:28:45 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (1.0.0)
02:28:45 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (2.4.6)
02:28:45 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (12.3.0)
02:28:45 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (6.0.3)
02:28:45 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (3.6.5)
02:28:45 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (2.34.2)
02:28:45 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (3.2.0)
02:28:45 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.2.dev0) (3.4.9)
02:28:45 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.2.dev0) (3.18)
02:28:45 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.2.dev0) (2.7.0)
02:28:45 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.2.dev0) (2026.6.17)
02:28:45 Building wheels for collected packages: omero-py
02:28:45 Building wheel for omero-py (pyproject.toml): started
02:28:46 Building wheel for omero-py (pyproject.toml): finished with status 'done'
02:28:46 Created wheel for omero-py: filename=omero_py-5.22.2.dev0-py3-none-any.whl size=2787060 sha256=9353af5fa943376030c7be738e498ce0c219d0ad9790288b8680995e39ac67c7
02:28:46 Stored in directory: /home/omero/.cache/pip/wheels/67/6d/a0/54908d8e3aee8366415fea8426f418a6717addeb1669d2e673
02:28:46 Successfully built omero-py
02:28:46 Installing collected packages: omero-py
02:28:46 Attempting uninstall: omero-py
02:28:46 Found existing installation: omero-py 5.22.1
02:28:47 Uninstalling omero-py-5.22.1:
02:28:53 Successfully uninstalled omero-py-5.22.1
02:29:09 Successfully installed omero-py-5.22.2.dev0
02:29:09 + for x in *.gz
02:29:09 + pip install omero_scripts-5.10.1.dev0.tar.gz
02:29:10 Processing ./omero_scripts-5.10.1.dev0.tar.gz
02:29:10 Installing build dependencies: started
02:29:11 Installing build dependencies: finished with status 'done'
02:29:11 Getting requirements to build wheel: started
02:29:11 Getting requirements to build wheel: finished with status 'done'
02:29:11 Preparing metadata (pyproject.toml): started
02:29:12 Preparing metadata (pyproject.toml): finished with status 'done'
02:29:12 Building wheels for collected packages: omero-scripts
02:29:12 Building wheel for omero-scripts (pyproject.toml): started
02:29:12 Building wheel for omero-scripts (pyproject.toml): finished with status 'done'
02:29:12 Created wheel for omero-scripts: filename=omero_scripts-5.10.1.dev0-py3-none-any.whl size=137216 sha256=1672afa25985fb516e3de57cbe8297e628d7e4b44260b6e3b2fb0de2bcc30b4e
02:29:12 Stored in directory: /home/omero/.cache/pip/wheels/88/2f/31/9478f1cef9d86ee7a706f3c8d94d67d22081ff846c64d43aa0
02:29:12 Successfully built omero-scripts
02:29:12 Installing collected packages: omero-scripts
02:29:13 Successfully installed omero-scripts-5.10.1.dev0
02:29:13 + for x in *.gz
02:29:13 + pip install omero_web-5.32.1.dev0.tar.gz
02:29:14 Processing ./omero_web-5.32.1.dev0.tar.gz
02:29:14 Installing build dependencies: started
02:29:16 Installing build dependencies: finished with status 'done'
02:29:16 Getting requirements to build wheel: started
02:29:16 Getting requirements to build wheel: finished with status 'done'
02:29:16 Preparing metadata (pyproject.toml): started
02:29:17 Preparing metadata (pyproject.toml): finished with status 'done'
02:29:17 Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.32.1.dev0) (5.22.2.dev0)
02:29:17 Collecting concurrent-log-handler>=0.9.20 (from omero-web==5.32.1.dev0)
02:29:17 Using cached concurrent_log_handler-0.9.29-py3-none-any.whl.metadata (27 kB)
02:29:17 Collecting Django<5.3,>=5.2.9 (from omero-web==5.32.1.dev0)
02:29:17 Using cached django-5.2.16-py3-none-any.whl.metadata (4.1 kB)
02:29:17 Collecting django-pipeline>=4.1.0 (from omero-web==5.32.1.dev0)
02:29:17 Using cached django_pipeline-4.1.0-py3-none-any.whl.metadata (5.9 kB)
02:29:17 Collecting django-cors-headers==3.7.0 (from omero-web==5.32.1.dev0)
02:29:17 Using cached django_cors_headers-3.7.0-py3-none-any.whl.metadata (15 kB)
02:29:17 Collecting whitenoise>=5.3.0 (from omero-web==5.32.1.dev0)
02:29:17 Using cached whitenoise-6.12.0-py3-none-any.whl.metadata (3.7 kB)
02:29:17 Collecting gunicorn>=19.3 (from omero-web==5.32.1.dev0)
02:29:17 Using cached gunicorn-26.0.0-py3-none-any.whl.metadata (5.4 kB)
02:29:17 Requirement already satisfied: omero-marshal>=0.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.32.1.dev0) (0.9.2.dev0)
02:29:17 Requirement already satisfied: Pillow in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.32.1.dev0) (12.3.0)
02:29:17 Collecting pytz (from omero-web==5.32.1.dev0)
02:29:17 Using cached pytz-2026.2-py2.py3-none-any.whl.metadata (22 kB)
02:29:17 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.32.1.dev0) (3.2.0)
02:29:17 Requirement already satisfied: packaging in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.32.1.dev0) (26.2)
02:29:17 Collecting importlib-resources (from omero-web==5.32.1.dev0)
02:29:17 Using cached importlib_resources-7.1.0-py3-none-any.whl.metadata (4.0 kB)
02:29:17 Collecting asgiref>=3.8.1 (from Django<5.3,>=5.2.9->omero-web==5.32.1.dev0)
02:29:17 Using cached asgiref-3.12.1-py3-none-any.whl.metadata (9.4 kB)
02:29:17 Collecting sqlparse>=0.3.1 (from Django<5.3,>=5.2.9->omero-web==5.32.1.dev0)
02:29:17 Using cached sqlparse-0.5.5-py3-none-any.whl.metadata (4.7 kB)
02:29:17 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web==5.32.1.dev0) (83.0.0)
02:29:17 Collecting wheel (from django-pipeline>=4.1.0->omero-web==5.32.1.dev0)
02:29:17 Using cached wheel-0.47.0-py3-none-any.whl.metadata (2.3 kB)
02:29:17 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.32.1.dev0) (1.4.4)
02:29:17 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.32.1.dev0) (1.0.0)
02:29:17 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.32.1.dev0) (2.4.6)
02:29:17 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.32.1.dev0) (6.0.3)
02:29:17 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.32.1.dev0) (3.6.5)
02:29:17 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.32.1.dev0) (2.34.2)
02:29:18 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.32.1.dev0) (3.4.9)
02:29:18 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.32.1.dev0) (3.18)
02:29:18 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.32.1.dev0) (2.7.0)
02:29:18 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.32.1.dev0) (2026.6.17)
02:29:18 Using cached django_cors_headers-3.7.0-py3-none-any.whl (12 kB)
02:29:18 Using cached django-5.2.16-py3-none-any.whl (8.3 MB)
02:29:18 Using cached asgiref-3.12.1-py3-none-any.whl (25 kB)
02:29:18 Using cached concurrent_log_handler-0.9.29-py3-none-any.whl (32 kB)
02:29:18 Using cached django_pipeline-4.1.0-py3-none-any.whl (75 kB)
02:29:18 Using cached gunicorn-26.0.0-py3-none-any.whl (212 kB)
02:29:18 Using cached sqlparse-0.5.5-py3-none-any.whl (46 kB)
02:29:18 Using cached whitenoise-6.12.0-py3-none-any.whl (20 kB)
02:29:18 Using cached importlib_resources-7.1.0-py3-none-any.whl (37 kB)
02:29:18 Using cached pytz-2026.2-py2.py3-none-any.whl (510 kB)
02:29:18 Using cached wheel-0.47.0-py3-none-any.whl (32 kB)
02:29:18 Building wheels for collected packages: omero-web
02:29:18 Building wheel for omero-web (pyproject.toml): started
02:29:19 Building wheel for omero-web (pyproject.toml): finished with status 'done'
02:29:19 Created wheel for omero-web: filename=omero_web-5.32.1.dev0-py3-none-any.whl size=2820645 sha256=2c2aa435b4fdd07a6dcc8f74529f48d631e60f89990c9000919f19ecfca2af32
02:29:19 Stored in directory: /home/omero/.cache/pip/wheels/91/ad/79/ec318377d2e814ec25bf29bc612d81f9a885cbc4aa52a338d5
02:29:19 Successfully built omero-web
02:29:19 Installing collected packages: pytz, whitenoise, wheel, sqlparse, importlib-resources, gunicorn, concurrent-log-handler, asgiref, django-pipeline, Django, django-cors-headers, omero-web
02:30:28
02:30:28 Successfully installed Django-5.2.16 asgiref-3.12.1 concurrent-log-handler-0.9.29 django-cors-headers-3.7.0 django-pipeline-4.1.0 gunicorn-26.0.0 importlib-resources-7.1.0 omero-web-5.32.1.dev0 pytz-2026.2 sqlparse-0.5.5 wheel-0.47.0 whitenoise-6.12.0
02:30:28 + cd /home/omero/workspace/OMERO-training/OMERO.server
02:30:28 + bash /home/omero/workspace/OMERO-training/openmicroscopy/examples/Training/training_setup.sh
02:30:28 + HOSTNAME=1640262b39d3
02:30:28 + PORT=4064
02:30:28 + WEBHOST=http://nginx/web
02:30:28 + SERVER_NAME=omero
02:30:28 + ROOT_PASSWORD=omero
02:30:28 + GROUP_NAME=training_group
02:30:28 + GROUP_NAME_2=training_group-2
02:30:28 + USER_NAME=training_user
02:30:28 + USER_NAME_2=training_user-2
02:30:28 + LIGHTADMIN_USER_NAME=ladmin_user
02:30:28 + USER_PASSWORD=ome
02:30:28 + CONFIG_FILENAME=training_ice.config
02:30:28 + omero login root@1640262b39d3:4064 -w omero
02:30:31 Created session for root@1640262b39d3:4064. Idle timeout: 10 min. Current group: system
02:30:31 + omero group add training_group --type read-only --ignore-existing
02:30:33 Using session for root@1640262b39d3:4064. Idle timeout: 10 min. Current group: system
02:30:33 Group exists: training_group (id=3)
02:30:33 + omero group add training_group-2 --type read-only --ignore-existing
02:30:35 Using session for root@1640262b39d3:4064. Idle timeout: 10 min. Current group: system
02:30:35 Group exists: training_group-2 (id=4)
02:30:35 + omero user add training_user training_user training_user training_group training_group-2 --ignore-existing -P ome
02:30:37 Using session for root@1640262b39d3:4064. Idle timeout: 10 min. Current group: system
02:30:37 User exists: training_user (id=2)
02:30:37 + omero user joingroup --name training_user --group-name training_group training_group-2
02:30:39 Using session for root@1640262b39d3:4064. Idle timeout: 10 min. Current group: system
02:30:39 2 is already in group 3
02:30:39 2 is already in group 4
02:30:39 + omero user add training_user-2 training_user-2 training_user-2 training_group training_group-2 --ignore-existing -P ome
02:30:41 Using session for root@1640262b39d3:4064. Idle timeout: 10 min. Current group: system
02:30:41 User exists: training_user-2 (id=3)
02:30:42 + omero user joingroup --name training_user-2 --group-name training_group training_group-2
02:30:44 Using session for root@1640262b39d3:4064. Idle timeout: 10 min. Current group: system
02:30:44 3 is already in group 3
02:30:44 3 is already in group 4
02:30:44 + omero user add ladmin_user ladmin_user ladmin_user training_group training_group-2 -a --ignore-existing -P ome
02:30:46 Using session for root@1640262b39d3:4064. Idle timeout: 10 min. Current group: system
02:30:46 User exists: ladmin_user (id=4)
02:30:46 + omero user joingroup --name ladmin_user --group-name training_group training_group-2
02:30:48 Using session for root@1640262b39d3:4064. Idle timeout: 10 min. Current group: system
02:30:48 4 is already in group 3
02:30:48 4 is already in group 4
02:30:48 ++ omero user info ladmin_user --style plain
02:30:48 ++ cut -d, -f1
02:30:50 Using session for root@1640262b39d3:4064. Idle timeout: 10 min. Current group: system
02:30:50 + id=4
02:30:50 + omero obj map-set Experimenter:4 config AdminPrivilege:Sudo true
02:30:52 Using session for root@1640262b39d3:4064. Idle timeout: 10 min. Current group: system
02:30:52 Experimenter:4
02:30:53 + omero logout
02:30:55 + touch test.fake
02:30:55 + omero login training_user@1640262b39d3:4064 -w ome -g training_group
02:30:57 Created session for training_user@1640262b39d3:4064. Idle timeout: 10 min. Current group: training_group
02:30:57 + nProjects=1
02:30:57 + nDatasets=2
02:30:57 + echo 'Creating projects and datasets'
02:30:57 Creating projects and datasets
02:30:57 + (( i=1 ))
02:30:57 + (( i<=1 ))
02:30:57 ++ omero obj new Project 'name=Project 1'
02:30:59 Using session for training_user@1640262b39d3:4064. Idle timeout: 10 min. Current group: training_group
02:30:59 + project=Project:351
02:30:59 + (( j=1 ))
02:30:59 + (( j<=2 ))
02:30:59 ++ omero obj new Dataset 'name=Dataset 1-1'
02:31:01 Using session for training_user@1640262b39d3:4064. Idle timeout: 10 min. Current group: training_group
02:31:01 + dataset=Dataset:351
02:31:01 + omero obj new ProjectDatasetLink parent=Project:351 child=Dataset:351
02:31:03 Using session for training_user@1640262b39d3:4064. Idle timeout: 10 min. Current group: training_group
02:31:03 ProjectDatasetLink:351
02:31:03 + echo 'Importing image into dataset'
02:31:03 Importing image into dataset
02:31:03 + omero import -d Dataset:351 test.fake --debug ERROR
02:31:05 Using session for training_user@1640262b39d3:4064. Idle timeout: 10 min. Current group: training_group
02:31:06 2026-07-19 02:31:06,385 276 [ main] INFO ome.formats.importer.ImportConfig - OMERO.blitz Version: 5.8.6-SNAPSHOT
02:31:06 2026-07-19 02:31:06,404 295 [ main] INFO ome.formats.importer.ImportConfig - Bioformats version: 8.5.0 revision: 877c317e4e396381dc76e56c1539b24947f71dce date: 18 March 2026
02:31:12 Image:351
02:31:12 Other imported objects:
02:31:12 Fileset:351
02:31:12
02:31:12 ==> Summary
02:31:12 1 file uploaded, 1 fileset created, 1 image imported, 0 errors in 0:00:03.889
02:31:12 + (( j++ ))
02:31:12 + (( j<=2 ))
02:31:12 ++ omero obj new Dataset 'name=Dataset 1-2'
02:31:14 Using session for training_user@1640262b39d3:4064. Idle timeout: 10 min. Current group: training_group
02:31:14 + dataset=Dataset:352
02:31:14 + omero obj new ProjectDatasetLink parent=Project:351 child=Dataset:352
02:31:16 Using session for training_user@1640262b39d3:4064. Idle timeout: 10 min. Current group: training_group
02:31:16 ProjectDatasetLink:352
02:31:16 + echo 'Importing image into dataset'
02:31:16 Importing image into dataset
02:31:16 + omero import -d Dataset:352 test.fake --debug ERROR
02:31:18 Using session for training_user@1640262b39d3:4064. Idle timeout: 10 min. Current group: training_group
02:31:18 2026-07-19 02:31:18,895 215 [ main] INFO ome.formats.importer.ImportConfig - OMERO.blitz Version: 5.8.6-SNAPSHOT
02:31:18 2026-07-19 02:31:18,908 228 [ main] INFO ome.formats.importer.ImportConfig - Bioformats version: 8.5.0 revision: 877c317e4e396381dc76e56c1539b24947f71dce date: 18 March 2026
02:31:22 Image:352
02:31:22 Other imported objects:
02:31:22 Fileset:352
02:31:22
02:31:22 ==> Summary
02:31:22 1 file uploaded, 1 fileset created, 1 image imported, 0 errors in 0:00:01.560
02:31:22 + (( j++ ))
02:31:22 + (( j<=2 ))
02:31:22 + (( i++ ))
02:31:22 + (( i<=1 ))
02:31:22 + (( j=1 ))
02:31:22 + (( j<=2 ))
02:31:22 + omero obj new Dataset 'name=Orphaned dataset 1'
02:31:24 Using session for training_user@1640262b39d3:4064. Idle timeout: 10 min. Current group: training_group
02:31:24 Dataset:353
02:31:24 + (( j++ ))
02:31:24 + (( j<=2 ))
02:31:24 + omero obj new Dataset 'name=Orphaned dataset 2'
02:31:26 Using session for training_user@1640262b39d3:4064. Idle timeout: 10 min. Current group: training_group
02:31:26 Dataset:354
02:31:26 + (( j++ ))
02:31:26 + (( j<=2 ))
02:31:26 + echo 'Importing image file'
02:31:26 Importing image file
02:31:26 + touch 'test&sizeT=10&sizeZ=5&sizeC=3.fake'
02:31:26 + omero import 'test&sizeT=10&sizeZ=5&sizeC=3.fake'
02:31:33 ++ sed -n -e 's/^Image://p' image_import.log
02:31:33 + imageid=353
02:31:33 ++ omero obj new MapAnnotation
02:31:35 Using session for training_user@1640262b39d3:4064. Idle timeout: 10 min. Current group: training_group
02:31:35 + MAP=MapAnnotation:351
02:31:35 + omero obj map-set MapAnnotation:351 mapValue testkey testvalue
02:31:37 Using session for training_user@1640262b39d3:4064. Idle timeout: 10 min. Current group: training_group
02:31:37 MapAnnotation:351
02:31:37 + omero obj new ImageAnnotationLink parent=Image:353 child=MapAnnotation:351
02:31:39 Using session for training_user@1640262b39d3:4064. Idle timeout: 10 min. Current group: training_group
02:31:39 ImageAnnotationLink:351
02:31:39 ++ omero obj new Screen name=Screen
02:31:42 Using session for training_user@1640262b39d3:4064. Idle timeout: 10 min. Current group: training_group
02:31:42 + screen=Screen:351
02:31:42 ++ omero obj new Plate name=Plate
02:31:45 Using session for training_user@1640262b39d3:4064. Idle timeout: 10 min. Current group: training_group
02:31:46 + plate=Plate:351
02:31:46 + omero obj new ScreenPlateLink parent=Screen:351 child=Plate:351
02:31:47 Using session for training_user@1640262b39d3:4064. Idle timeout: 10 min. Current group: training_group
02:31:47 ScreenPlateLink:351
02:31:48 + echo 'Importing SPW file'
02:31:48 Importing SPW file
02:31:48 + touch 'SPW&plates=1&plateRows=1&plateCols=3&fields=1&plateAcqs=1.fake'
02:31:48 + omero import -r Screen:351 'SPW&plates=1&plateRows=1&plateCols=3&fields=1&plateAcqs=1.fake'
02:31:56 ++ sed -n -e 's/^Plate://p' plate_import.log
02:31:56 + plateid=352
02:31:56 + omero logout
02:31:58 + omero login training_user-2@1640262b39d3:4064 -w ome -g training_group
02:32:00 Created session for training_user-2@1640262b39d3:4064. Idle timeout: 10 min. Current group: training_group
02:32:00 + omero obj new Project 'name=Project 0'
02:32:02 Using session for training_user-2@1640262b39d3:4064. Idle timeout: 10 min. Current group: training_group
02:32:02 Project:352
02:32:03 + omero obj new Dataset 'name=Dataset 0'
02:32:04 Using session for training_user-2@1640262b39d3:4064. Idle timeout: 10 min. Current group: training_group
02:32:05 Dataset:355
02:32:05 + omero import test.fake --debug ERROR
02:32:07 Using session for training_user-2@1640262b39d3:4064. Idle timeout: 10 min. Current group: training_group
02:32:07 2026-07-19 02:32:07,757 269 [ main] INFO ome.formats.importer.ImportConfig - OMERO.blitz Version: 5.8.6-SNAPSHOT
02:32:07 2026-07-19 02:32:07,771 283 [ main] INFO ome.formats.importer.ImportConfig - Bioformats version: 8.5.0 revision: 877c317e4e396381dc76e56c1539b24947f71dce date: 18 March 2026
02:32:10 Image:357
02:32:10 Other imported objects:
02:32:10 Fileset:355
02:32:10
02:32:10 ==> Summary
02:32:10 1 file uploaded, 1 fileset created, 1 image imported, 0 errors in 0:00:01.375
02:32:10 + omero obj new Screen name=Screen
02:32:13 Using session for training_user-2@1640262b39d3:4064. Idle timeout: 10 min. Current group: training_group
02:32:13 Screen:352
02:32:13 + omero obj new Plate name=Plate
02:32:15 Using session for training_user-2@1640262b39d3:4064. Idle timeout: 10 min. Current group: training_group
02:32:15 Plate:353
02:32:15 + omero login training_user@1640262b39d3:4064 -w ome -g training_group-2
02:32:17 Created session for training_user@1640262b39d3:4064. Idle timeout: 10 min. Current group: training_group-2
02:32:17 + omero obj new Project 'name=Project 0'
02:32:20 Using session for training_user@1640262b39d3:4064. Idle timeout: 10 min. Current group: training_group-2
02:32:20 Project:353
02:32:20 + omero obj new Dataset 'name=Dataset 0'
02:32:22 Using session for training_user@1640262b39d3:4064. Idle timeout: 10 min. Current group: training_group-2
02:32:22 Dataset:356
02:32:23 + omero import test.fake --debug ERROR
02:32:25 Using session for training_user@1640262b39d3:4064. Idle timeout: 10 min. Current group: training_group-2
02:32:25 2026-07-19 02:32:25,812 221 [ main] INFO ome.formats.importer.ImportConfig - OMERO.blitz Version: 5.8.6-SNAPSHOT
02:32:25 2026-07-19 02:32:25,826 235 [ main] INFO ome.formats.importer.ImportConfig - Bioformats version: 8.5.0 revision: 877c317e4e396381dc76e56c1539b24947f71dce date: 18 March 2026
02:32:28 Image:358
02:32:28 Other imported objects:
02:32:28 Fileset:356
02:32:28
02:32:28 ==> Summary
02:32:28 1 file uploaded, 1 fileset created, 1 image imported, 0 errors in 0:00:01.488
02:32:29 + omero obj new Screen name=Screen
02:32:31 Using session for training_user@1640262b39d3:4064. Idle timeout: 10 min. Current group: training_group-2
02:32:31 Screen:353
02:32:31 + omero obj new Plate name=Plate
02:32:33 Using session for training_user@1640262b39d3:4064. Idle timeout: 10 min. Current group: training_group-2
02:32:33 Plate:354
02:32:34 + omero logout
02:32:36 + echo omero.host=1640262b39d3
02:32:36 + echo omero.port=4064
02:32:36 + echo omero.webhost=http://nginx/web
02:32:36 + echo omero.servername=omero
02:32:36 + echo omero.user=training_user
02:32:36 + echo omero.pass=ome
02:32:36 + echo omero.group=training_group
02:32:36 + echo omero.projectid=351
02:32:36 + echo omero.datasetid=352
02:32:36 + echo omero.imageid=353
02:32:36 + echo omero.plateid=352
02:32:36 + echo omero.screenid=351
02:32:36 + echo omero.group2=training_group-2
02:32:36 + echo omero.ladmin=ladmin_user
02:32:36 + rm 'SPW&plates=1&plateRows=1&plateCols=3&fields=1&plateAcqs=1.fake' test.fake 'test&sizeT=10&sizeZ=5&sizeC=3.fake'
02:32:36 + mv training_ice.config /home/omero/workspace/OMERO-training/openmicroscopy/examples/Training
02:32:36 + omero sessions clear
02:32:38 1 session(s) cleared
02:32:39 !! 07/19/26 02:32:39.004 error: communicator not destroyed during global destruction.+ export ICE_CONFIG=/home/omero/workspace/OMERO-training/openmicroscopy/examples/Training/training_ice.config
02:32:39 + ICE_CONFIG=/home/omero/workspace/OMERO-training/openmicroscopy/examples/Training/training_ice.config
02:32:39 + pip install --upgrade requests
02:32:39 Requirement already satisfied: requests in /home/omero/workspace/OMERO-training/.venv3/lib64/python3.11/site-packages (2.34.2)
02:32:40 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-training/.venv3/lib64/python3.11/site-packages (from requests) (3.4.9)
02:32:40 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-training/.venv3/lib64/python3.11/site-packages (from requests) (3.18)
02:32:40 Requirement already satisfied: urllib3<3,>=1.26 in /home/omero/workspace/OMERO-training/.venv3/lib64/python3.11/site-packages (from requests) (2.7.0)
02:32:40 Requirement already satisfied: certifi>=2023.5.7 in /home/omero/workspace/OMERO-training/.venv3/lib64/python3.11/site-packages (from requests) (2026.6.17)
02:32:40 + python /home/omero/workspace/OMERO-training/openmicroscopy/examples/Training/python
02:32:51 Running training suite
02:32:51 created 20 shapes
02:32:51 retrieved 20 shapes in 4 batches
02:32:51 Current user:
02:32:51 ID: 2
02:32:51 Username: training_user
02:32:51 Full Name: training_user training_user
02:32:51 Is Admin: False
02:32:51 []
02:32:51 Member of:
02:32:51 ID: 3 Name: training_group
02:32:51 ID: 4 Name: training_group-2
02:32:51 Current group: training_group
02:32:51 Group owners:
02:32:51 Group members:
02:32:51 ID: 2 UserName: training_user Name: training_user training_user
02:32:51 ID: 4 UserName: ladmin_user Name: ladmin_user ladmin_user
02:32:51 ID: 3 UserName: training_user-2 Name: training_user-2 training_user-2
02:32:51 Owner of:
02:32:51 Admins:
02:32:51 ID: 0 UserName: root Name: root root
02:32:51 ID: 52 UserName: <hidden> Name: <hidden> <hidden>
02:32:51 ID: 4 UserName: ladmin_user Name: ladmin_user ladmin_user
02:32:51 Created new Image:359 Name:"numpy image"
02:32:51 newPlane for z,t: 0 0 uint8 0 127
02:32:51 newPlane for z,t: 0 1 uint8 0 127
02:32:51 newPlane for z,t: 0 2 uint8 0 127
02:32:51 newPlane for z,t: 0 3 uint8 0 127
02:32:51 newPlane for z,t: 0 4 uint8 0 127
02:32:51 newPlane for z,t: 0 5 uint8 0 127
02:32:51 newPlane for z,t: 0 6 uint8 0 127
02:32:51 newPlane for z,t: 0 7 uint8 0 127
02:32:51 newPlane for z,t: 0 8 uint8 0 127
02:32:51 newPlane for z,t: 0 9 uint8 0 127
02:32:51 newPlane for z,t: 1 0 uint8 0 127
02:32:51 newPlane for z,t: 1 1 uint8 0 127
02:32:51 newPlane for z,t: 1 2 uint8 0 127
02:32:51 newPlane for z,t: 1 3 uint8 0 127
02:32:51 newPlane for z,t: 1 4 uint8 0 127
02:32:51 newPlane for z,t: 1 5 uint8 0 127
02:32:51 newPlane for z,t: 1 6 uint8 0 127
02:32:51 newPlane for z,t: 1 7 uint8 0 127
02:32:51 newPlane for z,t: 1 8 uint8 0 127
02:32:51 newPlane for z,t: 1 9 uint8 0 127
02:32:51 newPlane for z,t: 2 0 uint8 0 127
02:32:51 newPlane for z,t: 2 1 uint8 0 127
02:32:51 newPlane for z,t: 2 2 uint8 0 127
02:32:51 newPlane for z,t: 2 3 uint8 0 127
02:32:51 newPlane for z,t: 2 4 uint8 0 127
02:32:51 newPlane for z,t: 2 5 uint8 0 127
02:32:51 newPlane for z,t: 2 6 uint8 0 127
02:32:51 newPlane for z,t: 2 7 uint8 0 127
02:32:51 newPlane for z,t: 2 8 uint8 0 127
02:32:51 newPlane for z,t: 2 9 uint8 0 127
02:32:51 newPlane for z,t: 3 0 uint8 0 127
02:32:51 newPlane for z,t: 3 1 uint8 0 127
02:32:51 newPlane for z,t: 3 2 uint8 0 127
02:32:51 newPlane for z,t: 3 3 uint8 0 127
02:32:51 newPlane for z,t: 3 4 uint8 0 127
02:32:51 newPlane for z,t: 3 5 uint8 0 127
02:32:51 newPlane for z,t: 3 6 uint8 0 127
02:32:51 newPlane for z,t: 3 7 uint8 0 127
02:32:51 newPlane for z,t: 3 8 uint8 0 127
02:32:51 newPlane for z,t: 3 9 uint8 0 127
02:32:51 newPlane for z,t: 4 0 uint8 0 127
02:32:51 newPlane for z,t: 4 1 uint8 0 127
02:32:51 newPlane for z,t: 4 2 uint8 0 127
02:32:51 newPlane for z,t: 4 3 uint8 0 127
02:32:51 newPlane for z,t: 4 4 uint8 0 127
02:32:51 newPlane for z,t: 4 5 uint8 0 127
02:32:51 newPlane for z,t: 4 6 uint8 0 127
02:32:51 newPlane for z,t: 4 7 uint8 0 127
02:32:51 newPlane for z,t: 4 8 uint8 0 127
02:32:51 newPlane for z,t: 4 9 uint8 0 127
02:32:51 Deleting, please wait.
02:32:51 Error? False
02:32:51 353 test&sizeT=10&sizeZ=5&sizeC=3.fake
02:32:51 training_user_2/Blitz-0-Ice.ThreadPool.Server-6/2026-07/19/02-31-30.802/ test&sizeT=10&sizeZ=5&sizeC=3.fake
02:32:51 1
02:32:51 training_user_2/Blitz-0-Ice.ThreadPool.Server-6/2026-07/19/02-31-30.802/ test&sizeT=10&sizeZ=5&sizeC=3.fake
02:32:51 Current group: training_group
02:32:51 Permissions: READ-ONLY (rwr---)
02:32:51 Project 0 Owner: training_user-2 training_user-2
02:32:51 Project 0 Owner: training_user-2 training_user-2
02:32:51 Project 0 Owner: training_user-2 training_user-2
02:32:51 Project 0 Owner: training_user-2 training_user-2
02:32:51 Project 0 Owner: training_user-2 training_user-2
02:32:51 Project 0 Owner: training_user-2 training_user-2
02:32:51 Project 0 Owner: training_user-2 training_user-2
02:32:51 Project 0 Owner: training_user-2 training_user-2
02:32:51 Project 1 Owner: training_user training_user
02:32:51 Project 1 Owner: training_user training_user
02:32:51 Project 1 Owner: training_user training_user
02:32:51 Project 1 Owner: training_user training_user
02:32:51 Project 1 Owner: training_user training_user
02:32:51 Project 1 Owner: training_user training_user
02:32:51 Project 1 Owner: training_user training_user
02:32:51 Project 1 Owner: training_user training_user
02:32:51 Image: <_ImageWrapper id=353>
02:32:51 Image: <_ImageWrapper id=353> Group: training_group 3
02:32:51 Image: <_ImageWrapper id=353> Channel: 0
02:32:51 Channel: 1
02:32:51 Channel: 2
02:32:51
02:32:51
02:32:51 original_metadata
02:32:51 global_metadata
02:32:51 series_metadata
02:32:51
02:32:51 Plane at zct: 0 0 0
02:32:51 [[ 0 0 0 ... 253 254 255]
02:32:51 [ 0 0 0 ... 253 254 255]
02:32:51 [ 0 0 0 ... 253 254 255]
02:32:51 ...
02:32:51 [ 0 1 2 ... 253 254 255]
02:32:51 [ 0 1 2 ... 253 254 255]
02:32:51 [ 0 1 2 ... 253 254 255]]
02:32:51 shape: (512, 512)
02:32:51 min: 0 max: 255 pixel type: uint8
02:32:51
02:32:51 Z stack of tiles:
02:32:51 Tile: (0, 0, 0, (50, 50, 10, 10)) min: 50 max: 59 sum: 5450
02:32:51 Tile: (1, 0, 0, (50, 50, 10, 10)) min: 50 max: 59 sum: 5450
02:32:51 Tile: (2, 0, 0, (50, 50, 10, 10)) min: 50 max: 59 sum: 5450
02:32:51 Tile: (3, 0, 0, (50, 50, 10, 10)) min: 50 max: 59 sum: 5450
02:32:51 Tile: (4, 0, 0, (50, 50, 10, 10)) min: 50 max: 59 sum: 5450
02:32:51
02:32:51 Hyper stack of planes:
02:32:51 plane zct: (2, 0, 0) min: 0 max: 255
02:32:51 plane zct: (2, 0, 1) min: 0 max: 255
02:32:51 plane zct: (2, 0, 2) min: 0 max: 255
02:32:51 plane zct: (2, 0, 3) min: 0 max: 255
02:32:51 plane zct: (2, 0, 4) min: 0 max: 255
02:32:51 plane zct: (2, 0, 5) min: 0 max: 255
02:32:51 plane zct: (2, 0, 6) min: 0 max: 255
02:32:51 plane zct: (2, 0, 7) min: 0 max: 255
02:32:51 plane zct: (2, 0, 8) min: 0 max: 255
02:32:51 plane zct: (2, 0, 9) min: 0 max: 255
02:32:51 plane zct: (2, 1, 0) min: 0 max: 255
02:32:51 plane zct: (2, 1, 1) min: 0 max: 255
02:32:51 plane zct: (2, 1, 2) min: 0 max: 255
02:32:51 plane zct: (2, 1, 3) min: 0 max: 255
02:32:51 plane zct: (2, 1, 4) min: 0 max: 255
02:32:51 plane zct: (2, 1, 5) min: 0 max: 255
02:32:51 plane zct: (2, 1, 6) min: 0 max: 255
02:32:51 plane zct: (2, 1, 7) min: 0 max: 255
02:32:51 plane zct: (2, 1, 8) min: 0 max: 255
02:32:51 plane zct: (2, 1, 9) min: 0 max: 255
02:32:51 plane zct: (2, 2, 0) min: 0 max: 255
02:32:51 plane zct: (2, 2, 1) min: 0 max: 255
02:32:51 plane zct: (2, 2, 2) min: 0 max: 255
02:32:51 plane zct: (2, 2, 3) min: 0 max: 255
02:32:51 plane zct: (2, 2, 4) min: 0 max: 255
02:32:51 plane zct: (2, 2, 5) min: 0 max: 255
02:32:51 plane zct: (2, 2, 6) min: 0 max: 255
02:32:51 plane zct: (2, 2, 7) min: 0 max: 255
02:32:51 plane zct: (2, 2, 8) min: 0 max: 255
02:32:51 plane zct: (2, 2, 9) min: 0 max: 255
02:32:51 plane zct: (3, 0, 0) min: 0 max: 255
02:32:51 plane zct: (3, 0, 1) min: 0 max: 255
02:32:51 plane zct: (3, 0, 2) min: 0 max: 255
02:32:51 plane zct: (3, 0, 3) min: 0 max: 255
02:32:51 plane zct: (3, 0, 4) min: 0 max: 255
02:32:51 plane zct: (3, 0, 5) min: 0 max: 255
02:32:51 plane zct: (3, 0, 6) min: 0 max: 255
02:32:51 plane zct: (3, 0, 7) min: 0 max: 255
02:32:51 plane zct: (3, 0, 8) min: 0 max: 255
02:32:51 plane zct: (3, 0, 9) min: 0 max: 255
02:32:51 plane zct: (3, 1, 0) min: 0 max: 255
02:32:51 plane zct: (3, 1, 1) min: 0 max: 255
02:32:51 plane zct: (3, 1, 2) min: 0 max: 255
02:32:51 plane zct: (3, 1, 3) min: 0 max: 255
02:32:51 plane zct: (3, 1, 4) min: 0 max: 255
02:32:51 plane zct: (3, 1, 5) min: 0 max: 255
02:32:51 plane zct: (3, 1, 6) min: 0 max: 255
02:32:51 plane zct: (3, 1, 7) min: 0 max: 255
02:32:51 plane zct: (3, 1, 8) min: 0 max: 255
02:32:51 plane zct: (3, 1, 9) min: 0 max: 255
02:32:51 plane zct: (3, 2, 0) min: 0 max: 255
02:32:51 plane zct: (3, 2, 1) min: 0 max: 255
02:32:51 plane zct: (3, 2, 2) min: 0 max: 255
02:32:51 plane zct: (3, 2, 3) min: 0 max: 255
02:32:51 plane zct: (3, 2, 4) min: 0 max: 255
02:32:51 plane zct: (3, 2, 5) min: 0 max: 255
02:32:51 plane zct: (3, 2, 6) min: 0 max: 255
02:32:51 plane zct: (3, 2, 7) min: 0 max: 255
02:32:51 plane zct: (3, 2, 8) min: 0 max: 255
02:32:51 plane zct: (3, 2, 9) min: 0 max: 255
02:32:51 plane zct: (4, 0, 0) min: 0 max: 255
02:32:51 plane zct: (4, 0, 1) min: 0 max: 255
02:32:51 plane zct: (4, 0, 2) min: 0 max: 255
02:32:51 plane zct: (4, 0, 3) min: 0 max: 255
02:32:51 plane zct: (4, 0, 4) min: 0 max: 255
02:32:51 plane zct: (4, 0, 5) min: 0 max: 255
02:32:51 plane zct: (4, 0, 6) min: 0 max: 255
02:32:51 plane zct: (4, 0, 7) min: 0 max: 255
02:32:51 plane zct: (4, 0, 8) min: 0 max: 255
02:32:51 plane zct: (4, 0, 9) min: 0 max: 255
02:32:51 plane zct: (4, 1, 0) min: 0 max: 255
02:32:51 plane zct: (4, 1, 1) min: 0 max: 255
02:32:51 plane zct: (4, 1, 2) min: 0 max: 255
02:32:51 plane zct: (4, 1, 3) min: 0 max: 255
02:32:51 plane zct: (4, 1, 4) min: 0 max: 255
02:32:51 plane zct: (4, 1, 5) min: 0 max: 255
02:32:51 plane zct: (4, 1, 6) min: 0 max: 255
02:32:51 plane zct: (4, 1, 7) min: 0 max: 255
02:32:51 plane zct: (4, 1, 8) min: 0 max: 255
02:32:51 plane zct: (4, 1, 9) min: 0 max: 255
02:32:51 plane zct: (4, 2, 0) min: 0 max: 255
02:32:51 plane zct: (4, 2, 1) min: 0 max: 255
02:32:51 plane zct: (4, 2, 2) min: 0 max: 255
02:32:51 plane zct: (4, 2, 3) min: 0 max: 255
02:32:51 plane zct: (4, 2, 4) min: 0 max: 255
02:32:51 plane zct: (4, 2, 5) min: 0 max: 255
02:32:51 plane zct: (4, 2, 6) min: 0 max: 255
02:32:51 plane zct: (4, 2, 7) min: 0 max: 255
02:32:51 plane zct: (4, 2, 8) min: 0 max: 255
02:32:51 plane zct: (4, 2, 9) min: 0 max: 255
02:32:51 {0: [1514, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1014, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024, 1024]}
02:32:52
02:32:52 List Projects:
02:32:52 ==================================================
02:32:52 Project:1 Name:"Project 1" (owner=training_user)
02:32:52 Dataset:1 Name:"Dataset 1-1" (owner=training_user)
02:32:52 Image:1 Name:"test.fake" (owner=training_user)
02:32:52 Dataset:2 Name:"Dataset 1-2" (owner=training_user)
02:32:52 Image:12 Name:"New Image" (owner=training_user)
02:32:52 Image:13 Name:"newImageFrom3" (owner=training_user)
02:32:52 Image:2 Name:"test.fake" (owner=training_user)
02:32:52 Dataset:7 Name:"New Dataset" (owner=training_user)
02:32:52 Dataset:17 Name:"new Name 1" (owner=training_user)
02:32:52 Dataset:18 Name:"new Name 2" (owner=training_user)
02:32:52 Project:51 Name:"Project 1" (owner=training_user)
02:32:52 Dataset:51 Name:"Dataset 1-1" (owner=training_user)
02:32:52 Image:51 Name:"test.fake" (owner=training_user)
02:32:52 Dataset:52 Name:"Dataset 1-2" (owner=training_user)
02:32:52 Image:62 Name:"New Image" (owner=training_user)
02:32:52 Image:63 Name:"newImageFrom53" (owner=training_user)
02:32:52 Image:52 Name:"test.fake" (owner=training_user)
02:32:52 Dataset:57 Name:"New Dataset" (owner=training_user)
02:32:52 Dataset:67 Name:"new Name 1" (owner=training_user)
02:32:52 Dataset:68 Name:"new Name 2" (owner=training_user)
02:32:52 Project:101 Name:"Project 1" (owner=training_user)
02:32:52 Dataset:101 Name:"Dataset 1-1" (owner=training_user)
02:32:52 Image:101 Name:"test.fake" (owner=training_user)
02:32:52 Dataset:102 Name:"Dataset 1-2" (owner=training_user)
02:32:52 Image:112 Name:"New Image" (owner=training_user)
02:32:52 Image:113 Name:"newImageFrom103" (owner=training_user)
02:32:52 Image:102 Name:"test.fake" (owner=training_user)
02:32:52 Dataset:107 Name:"New Dataset" (owner=training_user)
02:32:52 Dataset:117 Name:"new Name 1" (owner=training_user)
02:32:52 Dataset:118 Name:"new Name 2" (owner=training_user)
02:32:52 Project:151 Name:"Project 1" (owner=training_user)
02:32:52 Dataset:151 Name:"Dataset 1-1" (owner=training_user)
02:32:52 Image:151 Name:"test.fake" (owner=training_user)
02:32:52 Dataset:152 Name:"Dataset 1-2" (owner=training_user)
02:32:52 Image:162 Name:"New Image" (owner=training_user)
02:32:52 Image:163 Name:"newImageFrom153" (owner=training_user)
02:32:52 Image:152 Name:"test.fake" (owner=training_user)
02:32:52 Dataset:157 Name:"New Dataset" (owner=training_user)
02:32:52 Dataset:167 Name:"new Name 1" (owner=training_user)
02:32:52 Dataset:168 Name:"new Name 2" (owner=training_user)
02:32:52 Project:201 Name:"Project 1" (owner=training_user)
02:32:52 Dataset:201 Name:"Dataset 1-1" (owner=training_user)
02:32:52 Image:201 Name:"test.fake" (owner=training_user)
02:32:52 Dataset:202 Name:"Dataset 1-2" (owner=training_user)
02:32:52 Image:212 Name:"New Image" (owner=training_user)
02:32:52 Image:213 Name:"newImageFrom203" (owner=training_user)
02:32:52 Image:202 Name:"test.fake" (owner=training_user)
02:32:52 Dataset:207 Name:"New Dataset" (owner=training_user)
02:32:52 Dataset:217 Name:"new Name 1" (owner=training_user)
02:32:52 Dataset:218 Name:"new Name 2" (owner=training_user)
02:32:52
02:32:52 List orphaned Datasets:
02:32:52 ==================================================
02:32:52 Dataset:3 Name:"Orphaned dataset 1" (owner=training_user)
02:32:52 Dataset:4 Name:"Orphaned dataset 2" (owner=training_user)
02:32:52 Dataset:5 Name:"Dataset 0" (owner=training_user-2)
02:32:52 Dataset:10 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:9 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:8 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:11 Name:"New Dataset" (owner=training_user)
02:32:52 Dataset:12 Name:"New Dataset2" (owner=training_user)
02:32:52 Dataset:13 Name:"FileAnnotationDelete" (owner=training_user)
02:32:52 Dataset:14 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:15 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:16 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:53 Name:"Orphaned dataset 1" (owner=training_user)
02:32:52 Dataset:54 Name:"Orphaned dataset 2" (owner=training_user)
02:32:52 Dataset:55 Name:"Dataset 0" (owner=training_user-2)
02:32:52 Dataset:60 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:59 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:58 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:61 Name:"New Dataset" (owner=training_user)
02:32:52 Dataset:62 Name:"New Dataset2" (owner=training_user)
02:32:52 Dataset:63 Name:"FileAnnotationDelete" (owner=training_user)
02:32:52 Dataset:64 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:65 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:66 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:103 Name:"Orphaned dataset 1" (owner=training_user)
02:32:52 Dataset:104 Name:"Orphaned dataset 2" (owner=training_user)
02:32:52 Dataset:105 Name:"Dataset 0" (owner=training_user-2)
02:32:52 Dataset:110 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:109 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:108 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:111 Name:"New Dataset" (owner=training_user)
02:32:52 Dataset:112 Name:"New Dataset2" (owner=training_user)
02:32:52 Dataset:113 Name:"FileAnnotationDelete" (owner=training_user)
02:32:52 Dataset:114 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:115 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:116 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:153 Name:"Orphaned dataset 1" (owner=training_user)
02:32:52 Dataset:154 Name:"Orphaned dataset 2" (owner=training_user)
02:32:52 Dataset:155 Name:"Dataset 0" (owner=training_user-2)
02:32:52 Dataset:163 Name:"FileAnnotationDelete" (owner=training_user)
02:32:52 Dataset:160 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:159 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:158 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:161 Name:"New Dataset" (owner=training_user)
02:32:52 Dataset:162 Name:"New Dataset2" (owner=training_user)
02:32:52 Dataset:164 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:165 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:166 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:203 Name:"Orphaned dataset 1" (owner=training_user)
02:32:52 Dataset:204 Name:"Orphaned dataset 2" (owner=training_user)
02:32:52 Dataset:205 Name:"Dataset 0" (owner=training_user-2)
02:32:52 Dataset:214 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:215 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:216 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:210 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:209 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:208 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:211 Name:"New Dataset" (owner=training_user)
02:32:52 Dataset:212 Name:"New Dataset2" (owner=training_user)
02:32:52 Dataset:213 Name:"FileAnnotationDelete" (owner=training_user)
02:32:52 Dataset:253 Name:"Orphaned dataset 1" (owner=training_user)
02:32:52 Dataset:254 Name:"Orphaned dataset 2" (owner=training_user)
02:32:52 Dataset:303 Name:"Orphaned dataset 1" (owner=training_user)
02:32:52 Dataset:304 Name:"Orphaned dataset 2" (owner=training_user)
02:32:52 Dataset:255 Name:"Dataset 0" (owner=training_user-2)
02:32:52 Dataset:260 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:259 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:258 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:261 Name:"New Dataset" (owner=training_user)
02:32:52 Dataset:262 Name:"New Dataset2" (owner=training_user)
02:32:52 Dataset:263 Name:"FileAnnotationDelete" (owner=training_user)
02:32:52 Dataset:264 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:265 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:266 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:305 Name:"Dataset 0" (owner=training_user-2)
02:32:52 Dataset:310 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:309 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:308 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:311 Name:"New Dataset" (owner=training_user)
02:32:52 Dataset:312 Name:"New Dataset2" (owner=training_user)
02:32:52 Dataset:313 Name:"FileAnnotationDelete" (owner=training_user)
02:32:52 Dataset:314 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:315 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:316 Name:"MyDataset" (owner=training_user)
02:32:52 Dataset:353 Name:"Orphaned dataset 1" (owner=training_user)
02:32:52 Dataset:354 Name:"Orphaned dataset 2" (owner=training_user)
02:32:52 Dataset:355 Name:"Dataset 0" (owner=training_user-2)
02:32:52
02:32:52 Images in Dataset: 352
02:32:52 ==================================================
02:32:52 Image:352 Name:"test.fake" (owner=training_user)
02:32:52
02:32:52 Image:353
02:32:52 ==================================================
02:32:52 test&sizeT=10&sizeZ=5&sizeC=3.fake
02:32:52 X: 512
02:32:52 Y: 512
02:32:52 Z: 5
02:32:52 C: 3
02:32:52 T: 10
02:32:52 Channel: 0 Color: (255, 0, 0)
02:32:52 Lookup table: None
02:32:52 Is reverse intensity? False
02:32:52 Channel: 1 Color: (0, 255, 0)
02:32:52 Lookup table: None
02:32:52 Is reverse intensity? False
02:32:52 Channel: 2 Color: (0, 0, 255)
02:32:52 Lookup table: None
02:32:52 Is reverse intensity? False
02:32:52 Pixel Size X: None
02:32:52
02:32:52 List Screens:
02:32:52 ==================================================
02:32:57 Screen:1 Name:"Screen" (owner=training_user)
02:32:57 Plate:1 Name:"Plate" (owner=training_user)
02:32:57 Plate:2 Name:"Plate Name 0" (owner=training_user)
02:32:57 Screen:51 Name:"Screen" (owner=training_user)
02:32:57 Plate:51 Name:"Plate" (owner=training_user)
02:32:57 Plate:52 Name:"Plate Name 0" (owner=training_user)
02:32:57 Screen:101 Name:"Screen" (owner=training_user)
02:32:57 Plate:101 Name:"Plate" (owner=training_user)
02:32:57 Plate:102 Name:"Plate Name 0" (owner=training_user)
02:32:57 Screen:151 Name:"Screen" (owner=training_user)
02:32:57 Plate:151 Name:"Plate" (owner=training_user)
02:32:57 Plate:152 Name:"Plate Name 0" (owner=training_user)
02:32:57 Screen:201 Name:"Screen" (owner=training_user)
02:32:57 Plate:201 Name:"Plate" (owner=training_user)
02:32:57 Plate:202 Name:"Plate Name 0" (owner=training_user)
02:32:57 Screen:251 Name:"Screen" (owner=training_user)
02:32:57 Plate:251 Name:"Plate" (owner=training_user)
02:32:57 Plate:252 Name:"Plate Name 0" (owner=training_user)
02:32:57 Screen:301 Name:"Screen" (owner=training_user)
02:32:57 Plate:301 Name:"Plate" (owner=training_user)
02:32:57 Plate:302 Name:"Plate Name 0" (owner=training_user)
02:32:57 Screen:351 Name:"Screen" (owner=training_user)
02:32:57 Plate:351 Name:"Plate" (owner=training_user)
02:32:57 Plate:352 Name:"Plate Name 0" (owner=training_user)
02:32:57 Screen:2 Name:"Screen" (owner=training_user-2)
02:32:57 Screen:52 Name:"Screen" (owner=training_user-2)
02:32:57 Screen:102 Name:"Screen" (owner=training_user-2)
02:32:57 Screen:152 Name:"Screen" (owner=training_user-2)
02:32:57 Screen:202 Name:"Screen" (owner=training_user-2)
02:32:57 Screen:252 Name:"Screen" (owner=training_user-2)
02:32:57 Screen:302 Name:"Screen" (owner=training_user-2)
02:32:57 Screen:352 Name:"Screen" (owner=training_user-2)
02:32:57
02:32:57 Plate:352
02:32:57 ==================================================
02:32:57
02:32:57 Number of fields: (0, 0)
02:32:57
02:32:57 Grid size: {'rows': 1, 'columns': 3}
02:32:57
02:32:57 Wells in Plate: Plate Name 0
02:32:57 Well: 0 0 Fields: 1
02:32:57 Image: SPW&plates=1&plateRows=1&plateCols=3&fields=1&plateAcqs=1.fake [SPW] 354
02:32:57 Well: 0 1 Fields: 1
02:32:57 Image: SPW&plates=1&plateRows=1&plateCols=3&fields=1&plateAcqs=1.fake [SPW 2] 355
02:32:57 Well: 0 2 Fields: 1
02:32:57 Image: SPW&plates=1&plateRows=1&plateCols=3&fields=1&plateAcqs=1.fake [SPW 3] 356
02:32:57 351 <class 'omero.model.MapAnnotationI'>
02:32:57 added by training_user
02:32:57 Image ID: 353
02:32:57 Annotation ID: 351
02:32:57 353
02:32:57 Channel rendering settings:
02:32:57 Name: 0
02:32:57 Color: FF0000
02:32:57 Active: True
02:32:57 Levels: 0.0 - 255.0
02:32:57 Name: 1
02:32:57 Color: 00FF00
02:32:57 Active: True
02:32:57 Levels: 0.0 - 255.0
02:32:57 Name: 2
02:32:57 Color: 0000FF
02:32:57 Active: True
02:32:57 Levels: 0.0 - 255.0
02:32:57 isGreyscaleRenderingModel: False
02:32:57 Default Z/T positions:
02:32:57 Z = 2, T = 0
02:32:57 Rendering Defs on Image:
02:32:57 ID: 353 (owner: training_user training_user)
02:32:57 Adding a rectangle at theZ: 2, theT: 0, X: 50, Y: 200, width: 100, height: 50
02:32:57 ROI: ID: 352
02:32:57 Shape: id 371 theT 0 theZ 2 textValue test-Rectangle type Rectangle x 50.0 y 200.0 width 100.0 height 50.0
02:32:57 Shape: id 372 theT 0 theZ 2 textValue test-Ellipse type Ellipse x 200.0 y 50.0 radiusX 100.0 radiusY 50.0
02:32:57 ROI: ID: 353
02:32:57 Shape: id 373 theT 0 theZ 2 textValue test-Line type Line x1 50.0 x2 150.0 y1 200.0 y2 250.0
02:32:57 ROI: ID: 354
02:32:57 Shape: id 374 theT 0 theZ 0 textValue test-Mask type Mask x 50.0 y 50.0 width 100.0 height 100.0
02:32:57 ROI: ID: 355
02:32:57 Shape: id 375 theT 0 theZ 2 textValue test-Point type Point x 50.0 y 200.0
02:32:57 ROI: ID: 356
02:32:57 <class 'omero.model.PolygonI'> Not supported by this code
02:32:57 Shape: id 376 theT 0 theZ 2 textValue test-Polygon
02:32:57 Points 10000 Min 50.0 Mean 99.5 Max 149.0 Sum 149.0 StdDev 28.867513459481287
02:32:57 Points 5000 Min 50.0 Mean 99.5 Max 149.0 Sum 149.0 StdDev 28.86895708779012
02:32:57 Points 25145 Min 10.0 Mean 130.03957049115132 Max 249.0 Sum 249.0 StdDev 57.70727405876767
02:32:57 Points 101 Min 50.0 Mean 100.0 Max 150.0 Sum 150.0 StdDev 29.300170647967224
02:32:57 Points 1 Min 50.0 Mean 50.0 Max 50.0 Sum 50.0 StdDev 0.0
02:32:57 Points 15695 Min 0.0 Mean 157.55208665179993 Max 255.0 Sum 255.0 StdDev 72.87073453134771
02:32:57 Removing Shape from ROI...
02:32:57 Deleting ROI: 357
02:32:57 Table Columns:
02:32:57 Uid
02:32:57 MyStringColumnInit
02:32:57 Row count: 10
02:32:57
02:32:57 Get All Data for rows: [3, 5, 7]
02:32:57 Data for Column: Uid
02:32:57 1
02:32:57 2
02:32:57 3
02:32:57 4
02:32:57 5
02:32:57 6
02:32:57 7
02:32:57 8
02:32:57 9
02:32:57 10
02:32:57 Data for Column: MyStringColumnInit
02:32:57 one
02:32:57 two
02:32:57 three
02:32:57 four
02:32:57 five
02:32:57 six
02:32:57 seven
02:32:57 eight
02:32:57 nine
02:32:57 ten
02:32:57
02:32:57 Get All Data for rows with slice: [3, 5, 7]
02:32:57 Data for Column: Uid
02:32:57 4
02:32:57 6
02:32:57 8
02:32:57 Data for Column: MyStringColumnInit
02:32:57 four
02:32:57 six
02:32:57 eight
02:32:57
02:32:57 Get Data for cols: [1] and between rows: 3 - 7
02:32:57 Data for Column: MyStringColumnInit
02:32:57 four
02:32:57 five
02:32:57 six
02:32:57 seven
02:32:57
02:32:57 Get Data for cols: [1] and between rows: 3 - 7 with slice
02:32:57 Data for Column: MyStringColumnInit
02:32:57 four
02:32:57 five
02:32:57 six
02:32:57 seven
02:32:57 Query Results for Column: Uid
02:32:57 3
02:32:57 4
02:32:57 5
02:32:57 6
02:32:57 7
02:32:57 8
02:32:57 Query Results for Column: MyStringColumnInit
02:32:57 three
02:32:57 four
02:32:57 five
02:32:57 six
02:32:57 seven
02:32:57 eight
02:32:57 Opened table with row-count: 10
02:32:57 New dataset, Id: 357
02:32:57 {'TagAnnotation': 1, 'FileAnnotation': 0, 'CommentAnnotation': 0, 'LongAnnotation': 0, 'MapAnnotation': 1, 'OtherAnnotation': 0}
02:32:57 355 <class 'omero.model.TagAnnotationI'> added by training_user
02:32:57 Tag value: New Tag
02:32:57 356 <class 'omero.model.MapAnnotationI'> added by training_user
02:32:57
02:32:57 Creating an OriginalFile and FileAnnotation
02:32:57 Attaching FileAnnotation to Dataset: File ID: 357 , README.txt Size: 15
02:32:57
02:32:57 Annotations on Dataset: New Dataset
02:32:57 File ID: 949 README.txt Size: 15
02:32:57
02:32:57 Downloading file to /home/omero/workspace/OMERO-training/openmicroscopy/examples/Training/python/download/README.txt ...
02:32:57 File downloaded!
02:32:57 7 README.txt
02:32:57 57 README.txt
02:32:57 107 README.txt
02:32:57 157 README.txt
02:32:57 307 README.txt
02:32:57 257 README.txt
02:32:57 207 README.txt
02:32:57 357 README.txt
02:32:57 Found Annotation with namespace: imperial.training.demo
02:32:57 Plane: 0 0 0
02:32:57 Applying channel Names: ['0', '1', '2'] Colors: [(255, 0, 0), (0, 255, 0), (0, 0, 255)]
02:32:57 [(0.0, 255.0), (0.0, 255.0), (0.0, 255.0)]
02:32:57
02:32:57 List Datasets:
02:32:57 ID: 360 Name: MyDataset
02:32:57 ID: 359 Name: MyDataset
02:32:57 ID: 358 Name: MyDataset
02:32:57 ID: 316 Name: MyDataset
02:32:57 ID: 315 Name: MyDataset
02:32:57 ID: 314 Name: MyDataset
02:32:57 ID: 310 Name: MyDataset
02:32:57 ID: 309 Name: MyDataset
02:32:57 ID: 308 Name: MyDataset
02:32:57 ID: 266 Name: MyDataset
02:32:57 ID: 265 Name: MyDataset
02:32:57 ID: 264 Name: MyDataset
02:32:57 ID: 260 Name: MyDataset
02:32:57 ID: 259 Name: MyDataset
02:32:57 ID: 258 Name: MyDataset
02:32:57 ID: 216 Name: MyDataset
02:32:57 ID: 215 Name: MyDataset
02:32:57 ID: 214 Name: MyDataset
02:32:57 ID: 210 Name: MyDataset
02:32:57 ID: 209 Name: MyDataset
02:32:57 ID: 208 Name: MyDataset
02:32:57 ID: 166 Name: MyDataset
02:32:57 ID: 165 Name: MyDataset
02:32:57 ID: 164 Name: MyDataset
02:32:57 ID: 160 Name: MyDataset
02:32:57 ID: 159 Name: MyDataset
02:32:57 ID: 158 Name: MyDataset
02:32:57 ID: 116 Name: MyDataset
02:32:57 ID: 115 Name: MyDataset
02:32:57 ID: 114 Name: MyDataset
02:32:57 ID: 110 Name: MyDataset
02:32:57 ID: 109 Name: MyDataset
02:32:57 ID: 108 Name: MyDataset
02:32:57 ID: 66 Name: MyDataset
02:32:57 ID: 65 Name: MyDataset
02:32:57 ID: 64 Name: MyDataset
02:32:57 ID: 60 Name: MyDataset
02:32:57 ID: 59 Name: MyDataset
02:32:57 ID: 58 Name: MyDataset
02:32:57 ID: 16 Name: MyDataset
02:32:57 ID: 15 Name: MyDataset
02:32:57 ID: 14 Name: MyDataset
02:32:57 ID: 10 Name: MyDataset
02:32:57 ID: 9 Name: MyDataset
02:32:57 ID: 8 Name: MyDataset
02:32:57
02:32:57 List Tags:
02:32:57 ID: 8 Text: MyTag Desc: MyTag 0
02:32:57 ID: 9 Text: MyTag Desc: MyTag 1
02:32:57 ID: 10 Text: MyTag Desc: MyTag 2
02:32:57 ID: 16 Text: MyTag Desc: MyTag 0
02:32:57 ID: 17 Text: MyTag Desc: MyTag 1
02:32:57 ID: 18 Text: MyTag Desc: MyTag 2
02:32:57 ID: 58 Text: MyTag Desc: MyTag 0
02:32:57 ID: 59 Text: MyTag Desc: MyTag 1
02:32:57 ID: 60 Text: MyTag Desc: MyTag 2
02:32:57 ID: 66 Text: MyTag Desc: MyTag 0
02:32:57 ID: 67 Text: MyTag Desc: MyTag 1
02:32:57 ID: 68 Text: MyTag Desc: MyTag 2
02:32:57 ID: 108 Text: MyTag Desc: MyTag 0
02:32:57 ID: 109 Text: MyTag Desc: MyTag 1
02:32:57 ID: 110 Text: MyTag Desc: MyTag 2
02:32:57 ID: 116 Text: MyTag Desc: MyTag 0
02:32:57 ID: 117 Text: MyTag Desc: MyTag 1
02:32:57 ID: 118 Text: MyTag Desc: MyTag 2
02:32:57 ID: 158 Text: MyTag Desc: MyTag 0
02:32:57 ID: 159 Text: MyTag Desc: MyTag 1
02:32:57 ID: 160 Text: MyTag Desc: MyTag 2
02:32:57 ID: 166 Text: MyTag Desc: MyTag 0
02:32:57 ID: 167 Text: MyTag Desc: MyTag 1
02:32:57 ID: 168 Text: MyTag Desc: MyTag 2
02:32:57 ID: 208 Text: MyTag Desc: MyTag 0
02:32:57 ID: 209 Text: MyTag Desc: MyTag 1
02:32:57 ID: 210 Text: MyTag Desc: MyTag 2
02:32:57 ID: 216 Text: MyTag Desc: MyTag 0
02:32:57 ID: 217 Text: MyTag Desc: MyTag 1
02:32:57 ID: 218 Text: MyTag Desc: MyTag 2
02:32:57 ID: 258 Text: MyTag Desc: MyTag 0
02:32:57 ID: 259 Text: MyTag Desc: MyTag 1
02:32:57 ID: 260 Text: MyTag Desc: MyTag 2
02:32:57 ID: 266 Text: MyTag Desc: MyTag 0
02:32:57 ID: 267 Text: MyTag Desc: MyTag 1
02:32:57 ID: 268 Text: MyTag Desc: MyTag 2
02:32:57 ID: 308 Text: MyTag Desc: MyTag 0
02:32:57 ID: 309 Text: MyTag Desc: MyTag 1
02:33:06 ID: 310 Text: MyTag Desc: MyTag 2
02:33:06 ID: 316 Text: MyTag Desc: MyTag 0
02:33:06 ID: 317 Text: MyTag Desc: MyTag 1
02:33:06 ID: 318 Text: MyTag Desc: MyTag 2
02:33:06 ID: 358 Text: MyTag Desc: MyTag 0
02:33:06 ID: 359 Text: MyTag Desc: MyTag 1
02:33:06 ID: 360 Text: MyTag Desc: MyTag 2
02:33:06 New dataset, Id: 361
02:33:06 New dataset 2, Id: 362
02:33:06 test&sizeT=10&sizeZ=5&sizeC=3.fake
02:33:06 Tile at zct tile: 2 0 0 (5, 5, 100, 100)
02:33:06 [[ 0 0 0 ... 102 103 104]
02:33:06 [ 0 0 0 ... 102 103 104]
02:33:06 [ 0 0 0 ... 102 103 104]
02:33:06 ...
02:33:06 [ 5 6 7 ... 102 103 104]
02:33:06 [ 5 6 7 ... 102 103 104]
02:33:06 [ 5 6 7 ... 102 103 104]]
02:33:06 shape: (100, 100)
02:33:06 min: 0 max: 104 pixel type: uint8
02:33:06 Average : 53.9125
02:33:06 Getting data for T, tile: 0 (256, 0, 10, 512)
02:33:06 Getting data for T, tile: 1 (256, 0, 10, 512)
02:33:06 Getting data for T, tile: 2 (256, 0, 10, 512)
02:33:06 Getting data for T, tile: 3 (256, 0, 10, 512)
02:33:06 Getting data for T, tile: 4 (256, 0, 10, 512)
02:33:06 Getting data for T, tile: 5 (256, 0, 10, 512)
02:33:06 Getting data for T, tile: 6 (256, 0, 10, 512)
02:33:06 Getting data for T, tile: 7 (256, 0, 10, 512)
02:33:06 Getting data for T, tile: 8 (256, 0, 10, 512)
02:33:06 Getting data for T, tile: 9 (256, 0, 10, 512)
02:33:06 kymograph_data (512, 100)
02:33:06 Attaching kymograph.png to image
02:33:06 test&sizeT=10&sizeZ=5&sizeC=3.fake
02:33:06 Tile at zct tile: 2 0 0 (5, 5, 100, 100)
02:33:06 [[ 0 0 0 ... 102 103 104]
02:33:06 [ 0 0 0 ... 102 103 104]
02:33:06 [ 0 0 0 ... 102 103 104]
02:33:06 ...
02:33:06 [ 5 6 7 ... 102 103 104]
02:33:06 [ 5 6 7 ... 102 103 104]
02:33:06 [ 5 6 7 ... 102 103 104]]
02:33:06 shape: (100, 100)
02:33:06 min: 0 max: 104 pixel type: uint8
02:33:06 Average : 53.9125
02:33:06 Getting data for T, tile: 0 (256, 0, 10, 512)
02:33:06 Getting data for T, tile: 1 (256, 0, 10, 512)
02:33:06 Getting data for T, tile: 2 (256, 0, 10, 512)
02:33:06 Getting data for T, tile: 3 (256, 0, 10, 512)
02:33:06 Getting data for T, tile: 4 (256, 0, 10, 512)
02:33:06 Getting data for T, tile: 5 (256, 0, 10, 512)
02:33:06 Getting data for T, tile: 6 (256, 0, 10, 512)
02:33:06 Getting data for T, tile: 7 (256, 0, 10, 512)
02:33:06 Getting data for T, tile: 8 (256, 0, 10, 512)
02:33:06 Getting data for T, tile: 9 (256, 0, 10, 512)
02:33:06 kymograph_data (512, 100)
02:33:06 Attaching kymograph.png to image
02:33:06 No file downloaded. Project not rated.
02:33:06 New image, Id: 362
02:33:06 Starting at: http://nginx/web/api/
02:33:06 CSRF token B7jJRHwJ4rCYKY94Ye50A2cUZcUxV4mh
02:33:06 Servers:
02:33:06 -id: 1
02:33:06 name: omero
02:33:06 host: omero
02:33:06 port: 4064
02:33:06 -id: 2
02:33:06 name: testintegration
02:33:06 host: testintegration
02:33:06 port: 14064
02:33:06 eventContext {'sessionId': 974, 'sessionUuid': '232187e6-2f46-4877-8b59-0baa65ce8b5f', 'userId': 2, 'userName': 'training_user', 'groupId': 3, 'groupName': 'training_group', 'isAdmin': False, 'eventId': -1, 'eventType': 'User', 'memberOfGroups': [3, 4, 1], 'leaderOfGroups': []}
02:33:06 Projects:
02:33:06 2 Project 0
02:33:06 3 Project 0
02:33:06 Created Project: 356 API TEST foo
02:33:06 {'data': {'@type': 'http://www.openmicroscopy.org/Schemas/OME/2016-06#Project', '@id': 356, 'omero:details': {'@type': 'TBD#Details', 'owner': {'@type': 'http://www.openmicroscopy.org/Schemas/OME/2016-06#Experimenter', '@id': 2, 'omero:details': {'@type': 'TBD#Details', 'permissions': {'@type': 'TBD#Permissions', 'perm': 'rw----', 'canAnnotate': True, 'canDelete': False, 'canEdit': False, 'canLink': True, 'isWorldWrite': False, 'isWorldRead': False, 'isGroupWrite': False, 'isGroupRead': False, 'isGroupAnnotate': False, 'isUserWrite': True, 'isUserRead': True}}, 'FirstName': 'training_user', 'MiddleName': '', 'LastName': 'training_user', 'Email': '', 'Institution': '', 'UserName': 'training_user'}, 'group': {'@type': 'http://www.openmicroscopy.org/Schemas/OME/2016-06#ExperimenterGroup', '@id': 3, 'omero:details': {'@type': 'TBD#Details', 'permissions': {'@type': 'TBD#Permissions', 'perm': 'rwr---', 'canAnnotate': True, 'canDelete': False, 'canEdit': False, 'canLink': True, 'isWorldWrite': False, 'isWorldRead': False, 'isGroupWrite': False, 'isGroupRead': True, 'isGroupAnnotate': False, 'isUserWrite': True, 'isUserRead': True}}, 'Name': 'training_group'}, 'permissions': {'@type': 'TBD#Permissions', 'perm': 'rwr---', 'canAnnotate': True, 'canDelete': True, 'canEdit': True, 'canLink': True, 'isWorldWrite': False, 'isWorldRead': False, 'isGroupWrite': False, 'isGroupRead': True, 'isGroupAnnotate': False, 'isUserWrite': True, 'isUserRead': True}}, 'Name': 'API TEST foo', 'url:datasets': 'http://nginx/web/api/v0/m/projects/356/datasets/'}}
02:33:06 !! 07/19/26 02:33:06.246 error: communicator not destroyed during global destruction.+ deactivate
02:33:06 + '[' -n /opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
02:33:06 + PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
02:33:06 + export PATH
02:33:06 + unset _OLD_VIRTUAL_PATH
02:33:06 + '[' -n '' ']'
02:33:06 + hash -r
02:33:06 + '[' -n '' ']'
02:33:06 + unset VIRTUAL_ENV
02:33:06 + unset VIRTUAL_ENV_PROMPT
02:33:06 + '[' '!' '' = nondestructive ']'
02:33:06 + unset -f deactivate
02:33:06 + cd /home/omero/workspace/OMERO-training/openmicroscopy/examples/Training/java/src
02:33:06 + javac --release 11 -cp '.:/home/omero/workspace/OMERO-training/OMERO.server/lib/client/*' training/CreateImage.java training/DeleteData.java training/HowToUseTables.java training/LoadMetadataAdvanced.java training/RawDataAccess.java training/ReadDataAdvanced.java training/ReadData.java training/RenderImages.java training/ROIFolders.java training/ROIs.java training/Setup.java training/Sudo.java training/WriteData.java
02:33:08 Note: Some input files use unchecked or unsafe operations.
02:33:08 Note: Recompile with -Xlint:unchecked for details.
02:33:08 + java -cp '.:/home/omero/workspace/OMERO-training/OMERO.server/lib/client/*' training/Setup
02:33:12 omero.cmd.Delete2Response@5ed731d0
02:33:12 omero.cmd.Delete2Response@58e6d4b8
02:33:12 one [class java.lang.String] 1.0 [class java.lang.Double]
02:33:12 two [class java.lang.String] 2.0 [class java.lang.Double]
02:33:12 three [class java.lang.String] 3.0 [class java.lang.Double]
02:33:13 -1.0
02:33:13 0
02:33:13 1
02:33:13 2
02:33:15 0 |]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]] 1514
02:33:15 1 |]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]] 1014
02:33:15 2 |]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]] 1014
02:33:15 3 |]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]] 1014
02:33:15 4 |]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]] 1014
02:33:15 5 |]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]] 1014
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02:33:15 254 |]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]] 1024
02:33:15 255 |]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]] 1024
02:33:15 Project:151 Project 1
02:33:15 dataset:152 Dataset 1-2
02:33:15 dataset:168 new Name 2
02:33:15 dataset:157 New Dataset
02:33:15 dataset:167 new Name 1
02:33:15 dataset:151 Dataset 1-1
02:33:15 Project:201 Project 1
02:33:15 dataset:207 New Dataset
02:33:15 dataset:218 new Name 2
02:33:15 dataset:201 Dataset 1-1
02:33:15 dataset:202 Dataset 1-2
02:33:15 dataset:217 new Name 1
02:33:15 Project:102 Project 0
02:33:15 Project:252 Project 0
02:33:15 Project:2 Project 0
02:33:15 Project:301 Project 1
02:33:15 dataset:317 new Name 1
02:33:15 dataset:307 New Dataset
02:33:15 dataset:301 Dataset 1-1
02:33:15 dataset:318 new Name 2
02:33:15 dataset:302 Dataset 1-2
02:33:15 Project:352 Project 0
02:33:15 Project:152 Project 0
02:33:15 Project:251 Project 1
02:33:15 dataset:267 new Name 1
02:33:15 dataset:252 Dataset 1-2
02:33:15 dataset:251 Dataset 1-1
02:33:15 dataset:257 New Dataset
02:33:15 dataset:268 new Name 2
02:33:15 Project:101 Project 1
02:33:15 dataset:117 new Name 1
02:33:15 dataset:118 new Name 2
02:33:15 dataset:107 New Dataset
02:33:15 dataset:101 Dataset 1-1
02:33:15 dataset:102 Dataset 1-2
02:33:15 Project:1 Project 1
02:33:15 dataset:7 New Dataset
02:33:15 dataset:1 Dataset 1-1
02:33:15 dataset:18 new Name 2
02:33:15 dataset:17 new Name 1
02:33:15 dataset:2 Dataset 1-2
02:33:15 Project:51 Project 1
02:33:15 dataset:57 New Dataset
02:33:15 dataset:68 new Name 2
02:33:15 dataset:52 Dataset 1-2
02:33:15 dataset:51 Dataset 1-1
02:33:15 dataset:67 new Name 1
02:33:15 Project:202 Project 0
02:33:15 Project:52 Project 0
02:33:15 Project:351 Project 1
02:33:15 dataset:352 Dataset 1-2
02:33:15 dataset:351 Dataset 1-1
02:33:15 dataset:357 New Dataset
02:33:15 Project:302 Project 0
02:33:15 image:363 newImageFrom353
02:33:15 image:362 New Image
02:33:15 image:352 test.fake
02:33:15 5
02:33:15 10
02:33:15 3
02:33:15 512
02:33:15 512
02:33:15 screen:102 Screen
02:33:15 screen:302 Screen
02:33:15 screen:152 Screen
02:33:15 screen:301 Screen
02:33:15 plate:302 Plate Name 0
02:33:15 plate:301 Plate
02:33:15 screen:52 Screen
02:33:15 screen:202 Screen
02:33:15 screen:1 Screen
02:33:15 plate:2 Plate Name 0
02:33:15 plate:1 Plate
02:33:15 screen:252 Screen
02:33:15 screen:201 Screen
02:33:15 plate:201 Plate
02:33:15 plate:202 Plate Name 0
02:33:15 screen:352 Screen
02:33:15 screen:101 Screen
02:33:15 plate:101 Plate
02:33:15 plate:102 Plate Name 0
02:33:15 screen:351 Screen
02:33:15 plate:351 Plate
02:33:15 plate:352 Plate Name 0
02:33:15 screen:151 Screen
02:33:15 plate:151 Plate
02:33:15 plate:152 Plate Name 0
02:33:15 screen:251 Screen
02:33:15 plate:251 Plate
02:33:15 plate:252 Plate Name 0
02:33:15 screen:2 Screen
02:33:15 screen:51 Screen
02:33:15 plate:51 Plate
02:33:15 plate:52 Plate Name 0
02:33:15 well:353
02:33:15 well:351
02:33:15 well:352
02:33:15 plate:151
02:33:15 plate:252
02:33:15 plate:153
02:33:15 plate:251
02:33:15 plate:203
02:33:15 plate:102
02:33:15 plate:253
02:33:15 plate:2
02:33:15 plate:301
02:33:15 plate:152
02:33:15 plate:351
02:33:15 plate:52
02:33:15 plate:3
02:33:15 plate:1
02:33:15 plate:103
02:33:15 plate:302
02:33:15 plate:201
02:33:15 plate:353
02:33:15 plate:51
02:33:15 plate:101
02:33:15 plate:202
02:33:15 plate:352
02:33:15 plate:303
02:33:15 plate:53
02:33:16
02:33:16 List Datasets:
02:33:16 ID: 8 Name: MyDataset
02:33:16 ID: 9 Name: MyDataset
02:33:16 ID: 10 Name: MyDataset
02:33:16 ID: 14 Name: MyDataset
02:33:16 ID: 15 Name: MyDataset
02:33:16 ID: 16 Name: MyDataset
02:33:16 ID: 58 Name: MyDataset
02:33:16 ID: 59 Name: MyDataset
02:33:16 ID: 60 Name: MyDataset
02:33:16 ID: 64 Name: MyDataset
02:33:16
02:33:16 List Tags:
02:33:16 ID: 16 NS: omero.training.demo
02:33:16 ID: 17 NS: omero.training.demo
02:33:16 ID: 18 NS: omero.training.demo
02:33:16 ID: 66 NS: omero.training.demo
02:33:16 ID: 67 NS: omero.training.demo
02:33:16 ID: 68 NS: omero.training.demo
02:33:16 ID: 116 NS: omero.training.demo
02:33:16 ID: 117 NS: omero.training.demo
02:33:16 ID: 118 NS: omero.training.demo
02:33:16 ID: 166 NS: omero.training.demo
02:33:16 Dataset:58 MyDataset
02:33:16 Dataset:8 MyDataset
02:33:16 Dataset:366 MyDataset
02:33:16 Project:151 Project 1
02:33:16 Dataset:160 MyDataset
02:33:16 Dataset:161 New Dataset
02:33:16 Dataset:363 FileAnnotationDelete
02:33:16 Dataset:203 Orphaned dataset 1
02:33:16 Dataset:315 MyDataset
02:33:16 Dataset:154 Orphaned dataset 2
02:33:16 Dataset:12 New Dataset2
02:33:16 Dataset:158 MyDataset
02:33:16 Dataset:253 Orphaned dataset 1
02:33:16 Project:1 Project 1
02:33:16 Dataset:304 Orphaned dataset 2
02:33:16 Dataset:259 MyDataset
02:33:16 Dataset:365 MyDataset
02:33:16 Dataset:53 Orphaned dataset 1
02:33:16 Dataset:204 Orphaned dataset 2
02:33:16 Dataset:10 MyDataset
02:33:16 Dataset:260 MyDataset
02:33:16 Dataset:110 MyDataset
02:33:16 Dataset:115 MyDataset
02:33:16 Project:301 Project 1
02:33:16 Dataset:62 New Dataset2
02:33:16 Dataset:361 New Dataset
02:33:16 Dataset:103 Orphaned dataset 1
02:33:16 Dataset:104 Orphaned dataset 2
02:33:16 Dataset:3 Orphaned dataset 1
02:33:16 Dataset:166 MyDataset
02:33:16 Dataset:314 MyDataset
02:33:16 Dataset:211 New Dataset
02:33:16 Project:251 Project 1
02:33:16 Dataset:210 MyDataset
02:33:16 Dataset:162 New Dataset2
02:33:16 Dataset:312 New Dataset2
02:33:16 Dataset:65 MyDataset
02:33:16 Dataset:9 MyDataset
02:33:16 Dataset:153 Orphaned dataset 1
02:33:16 Dataset:303 Orphaned dataset 1
02:33:16 Dataset:59 MyDataset
02:33:16 Project:201 Project 1
02:33:16 Project:101 Project 1
02:33:16 Project:51 Project 1
02:33:16 Dataset:309 MyDataset
02:33:16 Dataset:209 MyDataset
02:33:16 Dataset:313 FileAnnotationDelete
02:33:16 Dataset:208 MyDataset
02:33:16 Dataset:354 Orphaned dataset 2
02:33:16 Dataset:16 MyDataset
02:33:16 Dataset:265 MyDataset
02:33:16 Dataset:358 MyDataset
02:33:16 Dataset:264 MyDataset
02:33:16 Dataset:212 New Dataset2
02:33:16 Dataset:362 New Dataset2
02:33:16 Dataset:215 MyDataset
02:33:16 Dataset:108 MyDataset
02:33:16 Dataset:254 Orphaned dataset 2
02:33:16 Dataset:359 MyDataset
02:33:16 Dataset:114 MyDataset
02:33:16 Dataset:353 Orphaned dataset 1
02:33:16 Dataset:112 New Dataset2
02:33:16 Dataset:263 FileAnnotationDelete
02:33:16 Dataset:165 MyDataset
02:33:16 Dataset:364 MyDataset
02:33:16 Dataset:116 MyDataset
02:33:16 Dataset:13 FileAnnotationDelete
02:33:16 Dataset:164 MyDataset
02:33:16 Project:351 Project 1
02:33:16 Dataset:15 MyDataset
02:33:16 Dataset:311 New Dataset
02:33:16 Dataset:14 MyDataset
02:33:16 Dataset:60 MyDataset
02:33:16 Dataset:113 FileAnnotationDelete
02:33:16 Dataset:61 New Dataset
02:33:16 Dataset:109 MyDataset
02:33:16 Dataset:261 New Dataset
02:33:16 Dataset:11 New Dataset
02:33:16 Dataset:258 MyDataset
02:33:16 Dataset:4 Orphaned dataset 2
02:33:16 Dataset:163 FileAnnotationDelete
02:33:16 Dataset:214 MyDataset
02:33:16 Dataset:159 MyDataset
02:33:16 Dataset:308 MyDataset
02:33:16 Dataset:54 Orphaned dataset 2
02:33:16 Dataset:64 MyDataset
02:33:16 Dataset:316 MyDataset
02:33:16 Dataset:213 FileAnnotationDelete
02:33:16 Dataset:310 MyDataset
02:33:16 Dataset:63 FileAnnotationDelete
02:33:16 Dataset:266 MyDataset
02:33:16 Dataset:66 MyDataset
02:33:16 Dataset:262 New Dataset2
02:33:16 Dataset:216 MyDataset
02:33:16 Dataset:111 New Dataset
02:33:16 Dataset:360 MyDataset
02:33:16 Size:0
02:33:16 512 512
02:33:17 9
02:33:17 9
02:33:17 1
02:33:18 Logged in as ladmin_user
02:33:18 Added 'training_user's tag' to dataset New Dataset2 on behalf of training_user
02:33:18 Added 'ladmin_user's tag' to dataset New Dataset2 as admin.
02:33:18 Finished: SUCCESS
