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00:57:50 inflating: OMERO.server-5.6.3-578-7a14b6d1ec-ice36-b16/sql/psql/OMERO4__0/OMERO3A__11.sql
00:57:50 inflating: OMERO.server-5.6.3-578-7a14b6d1ec-ice36-b16/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-fix.sql
00:57:50 inflating: OMERO.server-5.6.3-578-7a14b6d1ec-ice36-b16/sql/psql/OMERO5.0__0/2014-SV2-empty-passwords-list.sql
00:57:50 inflating: OMERO.server-5.6.3-578-7a14b6d1ec-ice36-b16/sql/psql/OMERO5.0__0/OMERO4.4__0.sql
00:57:50 inflating: OMERO.server-5.6.3-578-7a14b6d1ec-ice36-b16/sql/psql/OMERO5.1__1/OMERO5.0__0.sql
00:57:50 inflating: OMERO.server-5.6.3-578-7a14b6d1ec-ice36-b16/sql/psql/OMERO5.1__1/OMERO5.1-delete-and-disable-shares.sql
00:57:50 inflating: OMERO.server-5.6.3-578-7a14b6d1ec-ice36-b16/sql/psql/OMERO5.1__1/OMERO5.1-enable-shares.sql
00:57:50 inflating: OMERO.server-5.6.3-578-7a14b6d1ec-ice36-b16/sql/psql/OMERO5.1__1/OMERO5.1__0.sql
00:57:50 inflating: OMERO.server-5.6.3-578-7a14b6d1ec-ice36-b16/sql/psql/OMERO5.2__0/OMERO5.1__1.sql
00:57:50 inflating: OMERO.server-5.6.3-578-7a14b6d1ec-ice36-b16/sql/psql/OMERO5.2__0/OMERO5.2-delete-and-disable-shares.sql
00:57:50 inflating: OMERO.server-5.6.3-578-7a14b6d1ec-ice36-b16/sql/psql/OMERO5.2__0/OMERO5.2-enable-shares.sql
00:57:50 inflating: OMERO.server-5.6.3-578-7a14b6d1ec-ice36-b16/sql/psql/OMERO5.3__0/OMERO5.2__0-precheck.sql
00:57:50 inflating: OMERO.server-5.6.3-578-7a14b6d1ec-ice36-b16/sql/psql/OMERO5.3__0/OMERO5.2__0.sql
00:57:50 inflating: OMERO.server-5.6.3-578-7a14b6d1ec-ice36-b16/sql/psql/OMERO5.3__0/OMERO5.3-index-files.sql
00:57:50 inflating: OMERO.server-5.6.3-578-7a14b6d1ec-ice36-b16/sql/psql/OMERO5.3__0/delete-ns-orphans.sql
00:57:50 inflating: OMERO.server-5.6.3-578-7a14b6d1ec-ice36-b16/sql/psql/OMERO5.3__0/reverse_shape_color_argb_to_rgba.sql
00:57:50 inflating: OMERO.server-5.6.3-578-7a14b6d1ec-ice36-b16/sql/psql/OMERO5.3__0/shape_color_argb_to_rgba.sql
00:57:50 inflating: OMERO.server-5.6.3-578-7a14b6d1ec-ice36-b16/sql/psql/OMERO5.4DEV__1/OMERO5.4DEV__0.sql
00:57:50 inflating: OMERO.server-5.6.3-578-7a14b6d1ec-ice36-b16/sql/psql/OMERO5.4DEV__2/OMERO5.4DEV__1.sql
00:57:50 inflating: OMERO.server-5.6.3-578-7a14b6d1ec-ice36-b16/sql/psql/OMERO5.4DEV__3/OMERO5.4DEV__2.sql
00:57:50 inflating: OMERO.server-5.6.3-578-7a14b6d1ec-ice36-b16/sql/psql/OMERO5.4__0/OMERO5.3__0-precheck.sql
00:57:50 inflating: OMERO.server-5.6.3-578-7a14b6d1ec-ice36-b16/sql/psql/OMERO5.4__0/OMERO5.3__0.sql
00:57:50 inflating: OMERO.server-5.6.3-578-7a14b6d1ec-ice36-b16/sql/psql/OMERO5.4__0/OMERO5.3__1-precheck.sql
00:57:50 inflating: OMERO.server-5.6.3-578-7a14b6d1ec-ice36-b16/sql/psql/OMERO5.4__0/OMERO5.3__1.sql
00:57:50 inflating: OMERO.server-5.6.3-578-7a14b6d1ec-ice36-b16/sql/psql/OMERO5.4__0/OMERO5.4DEV__3.sql
00:57:50 inflating: OMERO.server-5.6.3-578-7a14b6d1ec-ice36-b16/sql/psql/OMERO5.4__0/allow-guest-user-without-password.sql
00:57:50 inflating: OMERO.server-5.6.3-578-7a14b6d1ec-ice36-b16/sql/psql/OMERO5.4__0/psql-footer.sql
00:57:50 inflating: OMERO.server-5.6.3-578-7a14b6d1ec-ice36-b16/sql/psql/OMERO5.4__0/psql-header.sql
00:57:50 inflating: OMERO.server-5.6.3-578-7a14b6d1ec-ice36-b16/sql/psql/OMERO5.4__0/schema.sql
00:57:50 inflating: OMERO.server-5.6.3-578-7a14b6d1ec-ice36-b16/sql/psql/OMERO5.4__0/views.sql
00:57:50 + rm -f OMERO.server-5.6.3-578-7a14b6d1ec-ice36-b16.zip
00:57:50 + mv /home/omero/workspace/OMERO-training/OMERO.server-5.6.3-578-7a14b6d1ec-ice36-b16 /home/omero/workspace/OMERO-training/OMERO.server
00:57:50 + source /home/omero/workspace/OMERO-training/.venv3/bin/activate
00:57:50 ++ deactivate nondestructive
00:57:50 ++ '[' -n '' ']'
00:57:50 ++ '[' -n '' ']'
00:57:50 ++ hash -r
00:57:50 ++ '[' -n '' ']'
00:57:50 ++ unset VIRTUAL_ENV
00:57:50 ++ unset VIRTUAL_ENV_PROMPT
00:57:50 ++ '[' '!' nondestructive = nondestructive ']'
00:57:50 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-training/.venv3
00:57:50 ++ export VIRTUAL_ENV
00:57:50 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:57:50 ++ PATH=/home/omero/workspace/OMERO-training/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:57:50 ++ export PATH
00:57:50 ++ '[' -n '' ']'
00:57:50 ++ '[' -z '' ']'
00:57:50 ++ _OLD_VIRTUAL_PS1=
00:57:50 ++ PS1='(.venv3) '
00:57:50 ++ export PS1
00:57:50 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
00:57:50 ++ export VIRTUAL_ENV_PROMPT
00:57:50 ++ hash -r
00:57:50 + for x in *.gz
00:57:50 + pip install omero_dropbox-5.7.1.dev0.tar.gz
00:57:50 Processing ./omero_dropbox-5.7.1.dev0.tar.gz
00:57:50 Installing build dependencies: started
00:57:51 Installing build dependencies: finished with status 'done'
00:57:51 Getting requirements to build wheel: started
00:57:51 Getting requirements to build wheel: finished with status 'done'
00:57:51 Preparing metadata (pyproject.toml): started
00:57:51 Preparing metadata (pyproject.toml): finished with status 'done'
00:57:51 Collecting omero-py (from omero-dropbox==5.7.1.dev0)
00:57:51 Using cached omero_py-5.21.3-py3-none-any.whl.metadata (6.5 kB)
00:57:51 Collecting appdirs (from omero-py->omero-dropbox==5.7.1.dev0)
00:57:51 Using cached appdirs-1.4.4-py2.py3-none-any.whl.metadata (9.0 kB)
00:57:51 Collecting future (from omero-py->omero-dropbox==5.7.1.dev0)
00:57:51 Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
00:57:51 Requirement already satisfied: numpy<3 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.4.1)
00:57:52 Collecting Pillow>=10.0.0 (from omero-py->omero-dropbox==5.7.1.dev0)
00:57:52 Using cached pillow-12.1.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (8.8 kB)
00:57:52 Collecting PyYAML (from omero-py->omero-dropbox==5.7.1.dev0)
00:57:52 Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB)
00:57:52 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.6.5)
00:57:52 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.32.5)
00:57:52 Collecting portalocker (from omero-py->omero-dropbox==5.7.1.dev0)
00:57:52 Using cached portalocker-3.2.0-py3-none-any.whl.metadata (8.7 kB)
00:57:52 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.4.4)
00:57:52 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.11)
00:57:52 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2.6.3)
00:57:52 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2026.1.4)
00:57:52 Using cached omero_py-5.21.3-py3-none-any.whl (2.8 MB)
00:57:52 Using cached pillow-12.1.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (7.0 MB)
00:57:52 Using cached appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB)
00:57:52 Using cached future-1.0.0-py3-none-any.whl (491 kB)
00:57:52 Using cached portalocker-3.2.0-py3-none-any.whl (22 kB)
00:57:52 Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB)
00:57:52 Building wheels for collected packages: omero-dropbox
00:57:52 Building wheel for omero-dropbox (pyproject.toml): started
00:57:52 Building wheel for omero-dropbox (pyproject.toml): finished with status 'done'
00:57:52 Created wheel for omero-dropbox: filename=omero_dropbox-5.7.1.dev0-py3-none-any.whl size=49138 sha256=4b62b6fa51f77190b574bbf889d31248f81bf21f9c27d1c3be3c28a9bf72bc5e
00:57:52 Stored in directory: /home/omero/.cache/pip/wheels/27/2f/e4/2a907ecffe4660d4c840758e6c0660e7ef9d3bb50ad634b559
00:57:52 Successfully built omero-dropbox
00:57:52 Installing collected packages: appdirs, PyYAML, portalocker, Pillow, future, omero-py, omero-dropbox
00:57:55
00:57:55 Successfully installed Pillow-12.1.0 PyYAML-6.0.3 appdirs-1.4.4 future-1.0.0 omero-dropbox-5.7.1.dev0 omero-py-5.21.3 portalocker-3.2.0
00:57:55 + for x in *.gz
00:57:55 + pip install omero_marshal-0.9.2.dev0.tar.gz
00:57:55 Processing ./omero_marshal-0.9.2.dev0.tar.gz
00:57:55 Installing build dependencies: started
00:57:56 Installing build dependencies: finished with status 'done'
00:57:56 Getting requirements to build wheel: started
00:57:56 Getting requirements to build wheel: finished with status 'done'
00:57:56 Preparing metadata (pyproject.toml): started
00:57:56 Preparing metadata (pyproject.toml): finished with status 'done'
00:57:56 Building wheels for collected packages: omero_marshal
00:57:56 Building wheel for omero_marshal (pyproject.toml): started
00:57:57 Building wheel for omero_marshal (pyproject.toml): finished with status 'done'
00:57:57 Created wheel for omero_marshal: filename=omero_marshal-0.9.2.dev0-py3-none-any.whl size=88132 sha256=d291bf57ea1061e4087d31e18fb31faa449b59f2781e3f8eee0804eafab00b80
00:57:57 Stored in directory: /home/omero/.cache/pip/wheels/a7/49/f8/ee97ae6cd0ac1217d15421daf522887b20ca2595964479e97a
00:57:57 Successfully built omero_marshal
00:57:57 Installing collected packages: omero_marshal
00:57:58 Successfully installed omero_marshal-0.9.2.dev0
00:57:58 + for x in *.gz
00:57:58 + pip install omero_py-5.22.0.dev0.tar.gz
00:57:58 Processing ./omero_py-5.22.0.dev0.tar.gz
00:57:58 Installing build dependencies: started
00:57:59 Installing build dependencies: finished with status 'done'
00:57:59 Getting requirements to build wheel: started
00:58:00 Getting requirements to build wheel: finished with status 'done'
00:58:00 Preparing metadata (pyproject.toml): started
00:58:00 Preparing metadata (pyproject.toml): finished with status 'done'
00:58:00 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (1.4.4)
00:58:00 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (1.0.0)
00:58:00 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (2.4.1)
00:58:00 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (12.1.0)
00:58:00 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (6.0.3)
00:58:00 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (3.6.5)
00:58:00 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (2.32.5)
00:58:00 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.0.dev0) (3.2.0)
00:58:00 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.0.dev0) (3.4.4)
00:58:00 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.0.dev0) (3.11)
00:58:00 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.0.dev0) (2.6.3)
00:58:00 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.0.dev0) (2026.1.4)
00:58:00 Building wheels for collected packages: omero-py
00:58:00 Building wheel for omero-py (pyproject.toml): started
00:58:01 Building wheel for omero-py (pyproject.toml): finished with status 'done'
00:58:01 Created wheel for omero-py: filename=omero_py-5.22.0.dev0-py3-none-any.whl size=2785928 sha256=05792bd474b7fe04d176b7f8a11f757db2741716d029c98f9bed346e072c2f5d
00:58:01 Stored in directory: /home/omero/.cache/pip/wheels/49/1e/74/58987fa60a9f6faa550bb72f45a160140f621644781946afb3
00:58:01 Successfully built omero-py
00:58:01 Installing collected packages: omero-py
00:58:01 Attempting uninstall: omero-py
00:58:01 Found existing installation: omero-py 5.21.3
00:58:01 Uninstalling omero-py-5.21.3:
00:58:01 Successfully uninstalled omero-py-5.21.3
00:58:03 Successfully installed omero-py-5.22.0.dev0
00:58:03 + for x in *.gz
00:58:03 + pip install omero_scripts-5.9.2.dev0.tar.gz
00:58:03 Processing ./omero_scripts-5.9.2.dev0.tar.gz
00:58:03 Installing build dependencies: started
00:58:04 Installing build dependencies: finished with status 'done'
00:58:04 Getting requirements to build wheel: started
00:58:05 Getting requirements to build wheel: finished with status 'done'
00:58:05 Preparing metadata (pyproject.toml): started
00:58:05 Preparing metadata (pyproject.toml): finished with status 'done'
00:58:05 Building wheels for collected packages: omero-scripts
00:58:05 Building wheel for omero-scripts (pyproject.toml): started
00:58:05 Building wheel for omero-scripts (pyproject.toml): finished with status 'done'
00:58:05 Created wheel for omero-scripts: filename=omero_scripts-5.9.2.dev0-py3-none-any.whl size=136991 sha256=bfb38bb4acc27e4d9a28b14d0d753d4b0dcdd9258076cb2289572e77a320846f
00:58:05 Stored in directory: /home/omero/.cache/pip/wheels/6c/06/35/0bc12bfe51e7f53c18a682ede8f5b472bca001e8bc51e8a022
00:58:05 Successfully built omero-scripts
00:58:05 Installing collected packages: omero-scripts
00:58:05 Successfully installed omero-scripts-5.9.2.dev0
00:58:05 + for x in *.gz
00:58:05 + pip install omero_web-5.30.2.dev0.tar.gz
00:58:06 Processing ./omero_web-5.30.2.dev0.tar.gz
00:58:06 Installing build dependencies: started
00:58:07 Installing build dependencies: finished with status 'done'
00:58:07 Getting requirements to build wheel: started
00:58:07 Getting requirements to build wheel: finished with status 'done'
00:58:07 Preparing metadata (pyproject.toml): started
00:58:07 Preparing metadata (pyproject.toml): finished with status 'done'
00:58:07 Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (5.22.0.dev0)
00:58:07 Collecting concurrent-log-handler>=0.9.20 (from omero-web==5.30.2.dev0)
00:58:07 Using cached concurrent_log_handler-0.9.28-py3-none-any.whl.metadata (23 kB)
00:58:07 Collecting Django<5.3,>=5.2.9 (from omero-web==5.30.2.dev0)
00:58:07 Using cached django-5.2.10-py3-none-any.whl.metadata (4.1 kB)
00:58:07 Collecting django-pipeline (from omero-web==5.30.2.dev0)
00:58:07 Using cached django_pipeline-4.1.0-py3-none-any.whl.metadata (5.9 kB)
00:58:07 Collecting django-cors-headers==3.7.0 (from omero-web==5.30.2.dev0)
00:58:07 Using cached django_cors_headers-3.7.0-py3-none-any.whl.metadata (15 kB)
00:58:07 Collecting whitenoise>=5.3.0 (from omero-web==5.30.2.dev0)
00:58:07 Using cached whitenoise-6.11.0-py3-none-any.whl.metadata (3.7 kB)
00:58:08 Collecting gunicorn>=19.3 (from omero-web==5.30.2.dev0)
00:58:08 Using cached gunicorn-23.0.0-py3-none-any.whl.metadata (4.4 kB)
00:58:08 Requirement already satisfied: omero-marshal>=0.9.1 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (0.9.2.dev0)
00:58:08 Requirement already satisfied: Pillow in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (12.1.0)
00:58:08 Collecting pytz (from omero-web==5.30.2.dev0)
00:58:08 Using cached pytz-2025.2-py2.py3-none-any.whl.metadata (22 kB)
00:58:08 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (3.2.0)
00:58:08 Requirement already satisfied: packaging in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.30.2.dev0) (25.0)
00:58:08 Collecting importlib-resources (from omero-web==5.30.2.dev0)
00:58:08 Using cached importlib_resources-6.5.2-py3-none-any.whl.metadata (3.9 kB)
00:58:08 Collecting asgiref>=3.8.1 (from Django<5.3,>=5.2.9->omero-web==5.30.2.dev0)
00:58:08 Using cached asgiref-3.11.0-py3-none-any.whl.metadata (9.3 kB)
00:58:08 Collecting sqlparse>=0.3.1 (from Django<5.3,>=5.2.9->omero-web==5.30.2.dev0)
00:58:08 Using cached sqlparse-0.5.5-py3-none-any.whl.metadata (4.7 kB)
00:58:08 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.30.2.dev0) (1.4.4)
00:58:08 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.30.2.dev0) (1.0.0)
00:58:08 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.30.2.dev0) (2.4.1)
00:58:08 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.30.2.dev0) (6.0.3)
00:58:08 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.30.2.dev0) (3.6.5)
00:58:08 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.30.2.dev0) (2.32.5)
00:58:08 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from django-pipeline->omero-web==5.30.2.dev0) (80.9.0)
00:58:08 Collecting wheel (from django-pipeline->omero-web==5.30.2.dev0)
00:58:08 Using cached wheel-0.45.1-py3-none-any.whl.metadata (2.3 kB)
00:58:08 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.30.2.dev0) (3.4.4)
00:58:08 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.30.2.dev0) (3.11)
00:58:08 Requirement already satisfied: urllib3<3,>=1.21.1 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.30.2.dev0) (2.6.3)
00:58:08 Requirement already satisfied: certifi>=2017.4.17 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.30.2.dev0) (2026.1.4)
00:58:08 Using cached django_cors_headers-3.7.0-py3-none-any.whl (12 kB)
00:58:08 Using cached django-5.2.10-py3-none-any.whl (8.3 MB)
00:58:08 Using cached asgiref-3.11.0-py3-none-any.whl (24 kB)
00:58:08 Using cached concurrent_log_handler-0.9.28-py3-none-any.whl (28 kB)
00:58:08 Using cached gunicorn-23.0.0-py3-none-any.whl (85 kB)
00:58:08 Using cached sqlparse-0.5.5-py3-none-any.whl (46 kB)
00:58:08 Using cached whitenoise-6.11.0-py3-none-any.whl (20 kB)
00:58:08 Using cached django_pipeline-4.1.0-py3-none-any.whl (75 kB)
00:58:08 Using cached importlib_resources-6.5.2-py3-none-any.whl (37 kB)
00:58:08 Using cached pytz-2025.2-py2.py3-none-any.whl (509 kB)
00:58:08 Using cached wheel-0.45.1-py3-none-any.whl (72 kB)
00:58:08 Building wheels for collected packages: omero-web
00:58:08 Building wheel for omero-web (pyproject.toml): started
00:58:09 Building wheel for omero-web (pyproject.toml): finished with status 'done'
00:58:09 Created wheel for omero-web: filename=omero_web-5.30.2.dev0-py3-none-any.whl size=2819190 sha256=e7f906eed843f9179c85576e044c08390bb976981e8deb5df59996d94cc52317
00:58:09 Stored in directory: /home/omero/.cache/pip/wheels/4f/49/87/a6841a3ddd512b351ea011e5e722319638442d7c15346098ff
00:58:09 Successfully built omero-web
00:58:09 Installing collected packages: pytz, whitenoise, wheel, sqlparse, importlib-resources, gunicorn, concurrent-log-handler, asgiref, django-pipeline, Django, django-cors-headers, omero-web
00:58:12
00:58:12 Successfully installed Django-5.2.10 asgiref-3.11.0 concurrent-log-handler-0.9.28 django-cors-headers-3.7.0 django-pipeline-4.1.0 gunicorn-23.0.0 importlib-resources-6.5.2 omero-web-5.30.2.dev0 pytz-2025.2 sqlparse-0.5.5 wheel-0.45.1 whitenoise-6.11.0
00:58:12 + cd /home/omero/workspace/OMERO-training/OMERO.server
00:58:12 + bash /home/omero/workspace/OMERO-training/openmicroscopy/examples/Training/training_setup.sh
00:58:12 + HOSTNAME=b399549150e8
00:58:12 + PORT=4064
00:58:12 + WEBHOST=http://nginx/web
00:58:12 + SERVER_NAME=omero
00:58:12 + ROOT_PASSWORD=omero
00:58:12 + GROUP_NAME=training_group
00:58:12 + GROUP_NAME_2=training_group-2
00:58:12 + USER_NAME=training_user
00:58:12 + USER_NAME_2=training_user-2
00:58:12 + LIGHTADMIN_USER_NAME=ladmin_user
00:58:12 + USER_PASSWORD=ome
00:58:12 + CONFIG_FILENAME=training_ice.config
00:58:12 + omero login root@b399549150e8:4064 -w omero
00:58:13 Created session for root@b399549150e8:4064. Idle timeout: 10 min. Current group: system
00:58:13 + omero group add training_group --type read-only --ignore-existing
00:58:14 Using session for root@b399549150e8:4064. Idle timeout: 10 min. Current group: system
00:58:14 Group exists: training_group (id=3)
00:58:14 + omero group add training_group-2 --type read-only --ignore-existing
00:58:14 Using session for root@b399549150e8:4064. Idle timeout: 10 min. Current group: system
00:58:14 Group exists: training_group-2 (id=4)
00:58:15 + omero user add training_user training_user training_user training_group training_group-2 --ignore-existing -P ome
00:58:15 Using session for root@b399549150e8:4064. Idle timeout: 10 min. Current group: system
00:58:15 User exists: training_user (id=2)
00:58:16 + omero user joingroup --name training_user --group-name training_group training_group-2
00:58:16 Using session for root@b399549150e8:4064. Idle timeout: 10 min. Current group: system
00:58:16 2 is already in group 3
00:58:16 2 is already in group 4
00:58:16 + omero user add training_user-2 training_user-2 training_user-2 training_group training_group-2 --ignore-existing -P ome
00:58:17 Using session for root@b399549150e8:4064. Idle timeout: 10 min. Current group: system
00:58:17 User exists: training_user-2 (id=3)
00:58:17 + omero user joingroup --name training_user-2 --group-name training_group training_group-2
00:58:18 Using session for root@b399549150e8:4064. Idle timeout: 10 min. Current group: system
00:58:18 3 is already in group 3
00:58:18 3 is already in group 4
00:58:18 + omero user add ladmin_user ladmin_user ladmin_user training_group training_group-2 -a --ignore-existing -P ome
00:58:19 Using session for root@b399549150e8:4064. Idle timeout: 10 min. Current group: system
00:58:19 User exists: ladmin_user (id=4)
00:58:19 + omero user joingroup --name ladmin_user --group-name training_group training_group-2
00:58:20 Using session for root@b399549150e8:4064. Idle timeout: 10 min. Current group: system
00:58:20 4 is already in group 3
00:58:20 4 is already in group 4
00:58:20 ++ omero user info ladmin_user --style plain
00:58:20 ++ cut -d, -f1
00:58:21 Using session for root@b399549150e8:4064. Idle timeout: 10 min. Current group: system
00:58:21 + id=4
00:58:21 + omero obj map-set Experimenter:4 config AdminPrivilege:Sudo true
00:58:22 Using session for root@b399549150e8:4064. Idle timeout: 10 min. Current group: system
00:58:22 Experimenter:4
00:58:22 + omero logout
00:58:23 + touch test.fake
00:58:23 + omero login training_user@b399549150e8:4064 -w ome -g training_group
00:58:24 Created session for training_user@b399549150e8:4064. Idle timeout: 10 min. Current group: training_group
00:58:24 + nProjects=1
00:58:24 + nDatasets=2
00:58:24 + echo 'Creating projects and datasets'
00:58:24 Creating projects and datasets
00:58:24 + (( i=1 ))
00:58:24 + (( i<=1 ))
00:58:24 ++ omero obj new Project 'name=Project 1'
00:58:25 Using session for training_user@b399549150e8:4064. Idle timeout: 10 min. Current group: training_group
00:58:25 + project=Project:651
00:58:25 + (( j=1 ))
00:58:25 + (( j<=2 ))
00:58:25 ++ omero obj new Dataset 'name=Dataset 1-1'
00:58:26 Using session for training_user@b399549150e8:4064. Idle timeout: 10 min. Current group: training_group
00:58:27 + dataset=Dataset:651
00:58:27 + omero obj new ProjectDatasetLink parent=Project:651 child=Dataset:651
00:58:28 Using session for training_user@b399549150e8:4064. Idle timeout: 10 min. Current group: training_group
00:58:28 ProjectDatasetLink:651
00:58:29 + echo 'Importing image into dataset'
00:58:29 Importing image into dataset
00:58:29 + omero import -d Dataset:651 test.fake --debug ERROR
00:58:29 Using session for training_user@b399549150e8:4064. Idle timeout: 10 min. Current group: training_group
00:58:30 2026-01-12 00:58:30,263 208 [ main] INFO ome.formats.importer.ImportConfig - OMERO.blitz Version: 5.8.4-SNAPSHOT
00:58:30 2026-01-12 00:58:30,277 222 [ main] INFO ome.formats.importer.ImportConfig - Bioformats version: 8.4.0-SNAPSHOT revision: 31cb3511c0f97342e130df9ae9621bd186506b2e date: 12 January 2026
00:58:33 Image:1151
00:58:33 Other imported objects:
00:58:33 Fileset:651
00:58:33
00:58:33 ==> Summary
00:58:33 1 file uploaded, 1 fileset created, 1 image imported, 0 errors in 0:00:01.903
00:58:33 + (( j++ ))
00:58:33 + (( j<=2 ))
00:58:33 ++ omero obj new Dataset 'name=Dataset 1-2'
00:58:34 Using session for training_user@b399549150e8:4064. Idle timeout: 10 min. Current group: training_group
00:58:34 + dataset=Dataset:652
00:58:34 + omero obj new ProjectDatasetLink parent=Project:651 child=Dataset:652
00:58:35 Using session for training_user@b399549150e8:4064. Idle timeout: 10 min. Current group: training_group
00:58:35 ProjectDatasetLink:652
00:58:35 + echo 'Importing image into dataset'
00:58:35 Importing image into dataset
00:58:35 + omero import -d Dataset:652 test.fake --debug ERROR
00:58:36 Using session for training_user@b399549150e8:4064. Idle timeout: 10 min. Current group: training_group
00:58:36 2026-01-12 00:58:36,665 216 [ main] INFO ome.formats.importer.ImportConfig - OMERO.blitz Version: 5.8.4-SNAPSHOT
00:58:36 2026-01-12 00:58:36,678 229 [ main] INFO ome.formats.importer.ImportConfig - Bioformats version: 8.4.0-SNAPSHOT revision: 31cb3511c0f97342e130df9ae9621bd186506b2e date: 12 January 2026
00:58:38 Image:1152
00:58:38 Other imported objects:
00:58:38 Fileset:652
00:58:38
00:58:38 ==> Summary
00:58:38 1 file uploaded, 1 fileset created, 1 image imported, 0 errors in 0:00:01.180
00:58:39 + (( j++ ))
00:58:39 + (( j<=2 ))
00:58:39 + (( i++ ))
00:58:39 + (( i<=1 ))
00:58:39 + (( j=1 ))
00:58:39 + (( j<=2 ))
00:58:39 + omero obj new Dataset 'name=Orphaned dataset 1'
00:58:39 Using session for training_user@b399549150e8:4064. Idle timeout: 10 min. Current group: training_group
00:58:39 Dataset:653
00:58:40 + (( j++ ))
00:58:40 + (( j<=2 ))
00:58:40 + omero obj new Dataset 'name=Orphaned dataset 2'
00:58:40 Using session for training_user@b399549150e8:4064. Idle timeout: 10 min. Current group: training_group
00:58:40 Dataset:654
00:58:40 + (( j++ ))
00:58:40 + (( j<=2 ))
00:58:40 + echo 'Importing image file'
00:58:40 Importing image file
00:58:40 + touch 'test&sizeT=10&sizeZ=5&sizeC=3.fake'
00:58:40 + omero import 'test&sizeT=10&sizeZ=5&sizeC=3.fake'
00:58:45 ++ sed -n -e 's/^Image://p' image_import.log
00:58:45 + imageid=1153
00:58:45 ++ omero obj new MapAnnotation
00:58:46 Using session for training_user@b399549150e8:4064. Idle timeout: 10 min. Current group: training_group
00:58:46 + MAP=MapAnnotation:701
00:58:46 + omero obj map-set MapAnnotation:701 mapValue testkey testvalue
00:58:47 Using session for training_user@b399549150e8:4064. Idle timeout: 10 min. Current group: training_group
00:58:47 MapAnnotation:701
00:58:47 + omero obj new ImageAnnotationLink parent=Image:1153 child=MapAnnotation:701
00:58:48 Using session for training_user@b399549150e8:4064. Idle timeout: 10 min. Current group: training_group
00:58:48 ImageAnnotationLink:651
00:58:48 ++ omero obj new Screen name=Screen
00:58:49 Using session for training_user@b399549150e8:4064. Idle timeout: 10 min. Current group: training_group
00:58:49 + screen=Screen:651
00:58:49 ++ omero obj new Plate name=Plate
00:58:50 Using session for training_user@b399549150e8:4064. Idle timeout: 10 min. Current group: training_group
00:58:50 + plate=Plate:651
00:58:50 + omero obj new ScreenPlateLink parent=Screen:651 child=Plate:651
00:58:51 Using session for training_user@b399549150e8:4064. Idle timeout: 10 min. Current group: training_group
00:58:51 ScreenPlateLink:651
00:58:51 + echo 'Importing SPW file'
00:58:51 Importing SPW file
00:58:51 + touch 'SPW&plates=1&plateRows=1&plateCols=3&fields=1&plateAcqs=1.fake'
00:58:51 + omero import -r Screen:651 'SPW&plates=1&plateRows=1&plateCols=3&fields=1&plateAcqs=1.fake'
00:58:56 ++ sed -n -e 's/^Plate://p' plate_import.log
00:58:56 + plateid=652
00:58:56 + omero logout
00:58:57 + omero login training_user-2@b399549150e8:4064 -w ome -g training_group
00:58:57 Created session for training_user-2@b399549150e8:4064. Idle timeout: 10 min. Current group: training_group
00:58:57 + omero obj new Project 'name=Project 0'
00:58:58 Using session for training_user-2@b399549150e8:4064. Idle timeout: 10 min. Current group: training_group
00:58:58 Project:652
00:58:58 + omero obj new Dataset 'name=Dataset 0'
00:58:59 Using session for training_user-2@b399549150e8:4064. Idle timeout: 10 min. Current group: training_group
00:58:59 Dataset:655
00:58:59 + omero import test.fake --debug ERROR
00:59:00 Using session for training_user-2@b399549150e8:4064. Idle timeout: 10 min. Current group: training_group
00:59:01 2026-01-12 00:59:01,183 213 [ main] INFO ome.formats.importer.ImportConfig - OMERO.blitz Version: 5.8.4-SNAPSHOT
00:59:01 2026-01-12 00:59:01,197 227 [ main] INFO ome.formats.importer.ImportConfig - Bioformats version: 8.4.0-SNAPSHOT revision: 31cb3511c0f97342e130df9ae9621bd186506b2e date: 12 January 2026
00:59:03 Image:1157
00:59:03 Other imported objects:
00:59:03 Fileset:655
00:59:03
00:59:03 ==> Summary
00:59:03 1 file uploaded, 1 fileset created, 1 image imported, 0 errors in 0:00:00.674
00:59:03 + omero obj new Screen name=Screen
00:59:04 Using session for training_user-2@b399549150e8:4064. Idle timeout: 10 min. Current group: training_group
00:59:04 Screen:652
00:59:04 + omero obj new Plate name=Plate
00:59:05 Using session for training_user-2@b399549150e8:4064. Idle timeout: 10 min. Current group: training_group
00:59:05 Plate:653
00:59:05 + omero login training_user@b399549150e8:4064 -w ome -g training_group-2
00:59:06 Created session for training_user@b399549150e8:4064. Idle timeout: 10 min. Current group: training_group-2
00:59:06 + omero obj new Project 'name=Project 0'
00:59:07 Using session for training_user@b399549150e8:4064. Idle timeout: 10 min. Current group: training_group-2
00:59:07 Project:653
00:59:07 + omero obj new Dataset 'name=Dataset 0'
00:59:08 Using session for training_user@b399549150e8:4064. Idle timeout: 10 min. Current group: training_group-2
00:59:08 Dataset:656
00:59:08 + omero import test.fake --debug ERROR
00:59:09 Using session for training_user@b399549150e8:4064. Idle timeout: 10 min. Current group: training_group-2
00:59:09 2026-01-12 00:59:09,795 227 [ main] INFO ome.formats.importer.ImportConfig - OMERO.blitz Version: 5.8.4-SNAPSHOT
00:59:09 2026-01-12 00:59:09,809 241 [ main] INFO ome.formats.importer.ImportConfig - Bioformats version: 8.4.0-SNAPSHOT revision: 31cb3511c0f97342e130df9ae9621bd186506b2e date: 12 January 2026
00:59:11 Image:1158
00:59:11 Other imported objects:
00:59:11 Fileset:656
00:59:11
00:59:11 ==> Summary
00:59:11 1 file uploaded, 1 fileset created, 1 image imported, 0 errors in 0:00:00.699
00:59:11 + omero obj new Screen name=Screen
00:59:12 Using session for training_user@b399549150e8:4064. Idle timeout: 10 min. Current group: training_group-2
00:59:12 Screen:653
00:59:12 + omero obj new Plate name=Plate
00:59:13 Using session for training_user@b399549150e8:4064. Idle timeout: 10 min. Current group: training_group-2
00:59:13 Plate:654
00:59:13 + omero logout
00:59:14 + echo omero.host=b399549150e8
00:59:14 + echo omero.port=4064
00:59:14 + echo omero.webhost=http://nginx/web
00:59:14 + echo omero.servername=omero
00:59:14 + echo omero.user=training_user
00:59:14 + echo omero.pass=ome
00:59:14 + echo omero.group=training_group
00:59:14 + echo omero.projectid=651
00:59:14 + echo omero.datasetid=652
00:59:14 + echo omero.imageid=1153
00:59:14 + echo omero.plateid=652
00:59:14 + echo omero.screenid=651
00:59:14 + echo omero.group2=training_group-2
00:59:14 + echo omero.ladmin=ladmin_user
00:59:14 + rm 'SPW&plates=1&plateRows=1&plateCols=3&fields=1&plateAcqs=1.fake' test.fake 'test&sizeT=10&sizeZ=5&sizeC=3.fake'
00:59:14 + mv training_ice.config /home/omero/workspace/OMERO-training/openmicroscopy/examples/Training
00:59:14 + omero sessions clear
00:59:15 1 session(s) cleared
00:59:15 !! 01/12/26 00:59:15.650 error: communicator not destroyed during global destruction.+ export ICE_CONFIG=/home/omero/workspace/OMERO-training/openmicroscopy/examples/Training/training_ice.config
00:59:15 + ICE_CONFIG=/home/omero/workspace/OMERO-training/openmicroscopy/examples/Training/training_ice.config
00:59:15 + pip install --upgrade requests
00:59:15 Requirement already satisfied: requests in /home/omero/workspace/OMERO-training/.venv3/lib64/python3.11/site-packages (2.32.5)
00:59:16 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-training/.venv3/lib64/python3.11/site-packages (from requests) (3.4.4)
00:59:16 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-training/.venv3/lib64/python3.11/site-packages (from requests) (3.11)
00:59:16 Requirement already satisfied: urllib3<3,>=1.21.1 in /home/omero/workspace/OMERO-training/.venv3/lib64/python3.11/site-packages (from requests) (2.6.3)
00:59:16 Requirement already satisfied: certifi>=2017.4.17 in /home/omero/workspace/OMERO-training/.venv3/lib64/python3.11/site-packages (from requests) (2026.1.4)
00:59:16 + python /home/omero/workspace/OMERO-training/openmicroscopy/examples/Training/python
00:59:23 Running training suite
00:59:23 created 20 shapes
00:59:23 retrieved 20 shapes in 4 batches
00:59:23 Current user:
00:59:23 ID: 2
00:59:23 Username: training_user
00:59:23 Full Name: training_user training_user
00:59:23 Is Admin: False
00:59:23 []
00:59:23 Member of:
00:59:23 ID: 3 Name: training_group
00:59:23 ID: 4 Name: training_group-2
00:59:23 Current group: training_group
00:59:23 Group owners:
00:59:23 Group members:
00:59:23 ID: 4 UserName: ladmin_user Name: ladmin_user ladmin_user
00:59:23 ID: 2 UserName: training_user Name: training_user training_user
00:59:23 ID: 3 UserName: training_user-2 Name: training_user-2 training_user-2
00:59:23 Owner of:
00:59:23 Admins:
00:59:23 ID: 0 UserName: root Name: root root
00:59:23 ID: 4 UserName: ladmin_user Name: ladmin_user ladmin_user
00:59:23 Created new Image:1159 Name:"numpy image"
00:59:23 newPlane for z,t: 0 0 uint8 0 127
00:59:23 newPlane for z,t: 0 1 uint8 0 127
00:59:23 newPlane for z,t: 0 2 uint8 0 127
00:59:23 newPlane for z,t: 0 3 uint8 0 127
00:59:23 newPlane for z,t: 0 4 uint8 0 127
00:59:23 newPlane for z,t: 0 5 uint8 0 127
00:59:23 newPlane for z,t: 0 6 uint8 0 127
00:59:23 newPlane for z,t: 0 7 uint8 0 127
00:59:23 newPlane for z,t: 0 8 uint8 0 127
00:59:23 newPlane for z,t: 0 9 uint8 0 127
00:59:23 newPlane for z,t: 1 0 uint8 0 127
00:59:23 newPlane for z,t: 1 1 uint8 0 127
00:59:23 newPlane for z,t: 1 2 uint8 0 127
00:59:23 newPlane for z,t: 1 3 uint8 0 127
00:59:23 newPlane for z,t: 1 4 uint8 0 127
00:59:23 newPlane for z,t: 1 5 uint8 0 127
00:59:23 newPlane for z,t: 1 6 uint8 0 127
00:59:23 newPlane for z,t: 1 7 uint8 0 127
00:59:23 newPlane for z,t: 1 8 uint8 0 127
00:59:23 newPlane for z,t: 1 9 uint8 0 127
00:59:23 newPlane for z,t: 2 0 uint8 0 127
00:59:23 newPlane for z,t: 2 1 uint8 0 127
00:59:23 newPlane for z,t: 2 2 uint8 0 127
00:59:23 newPlane for z,t: 2 3 uint8 0 127
00:59:23 newPlane for z,t: 2 4 uint8 0 127
00:59:23 newPlane for z,t: 2 5 uint8 0 127
00:59:23 newPlane for z,t: 2 6 uint8 0 127
00:59:23 newPlane for z,t: 2 7 uint8 0 127
00:59:23 newPlane for z,t: 2 8 uint8 0 127
00:59:23 newPlane for z,t: 2 9 uint8 0 127
00:59:23 newPlane for z,t: 3 0 uint8 0 127
00:59:23 newPlane for z,t: 3 1 uint8 0 127
00:59:23 newPlane for z,t: 3 2 uint8 0 127
00:59:23 newPlane for z,t: 3 3 uint8 0 127
00:59:23 newPlane for z,t: 3 4 uint8 0 127
00:59:23 newPlane for z,t: 3 5 uint8 0 127
00:59:23 newPlane for z,t: 3 6 uint8 0 127
00:59:23 newPlane for z,t: 3 7 uint8 0 127
00:59:23 newPlane for z,t: 3 8 uint8 0 127
00:59:23 newPlane for z,t: 3 9 uint8 0 127
00:59:23 newPlane for z,t: 4 0 uint8 0 127
00:59:23 newPlane for z,t: 4 1 uint8 0 127
00:59:23 newPlane for z,t: 4 2 uint8 0 127
00:59:23 newPlane for z,t: 4 3 uint8 0 127
00:59:23 newPlane for z,t: 4 4 uint8 0 127
00:59:23 newPlane for z,t: 4 5 uint8 0 127
00:59:23 newPlane for z,t: 4 6 uint8 0 127
00:59:23 newPlane for z,t: 4 7 uint8 0 127
00:59:23 newPlane for z,t: 4 8 uint8 0 127
00:59:23 newPlane for z,t: 4 9 uint8 0 127
00:59:23 Deleting, please wait.
00:59:23 Error? False
00:59:23 1153 test&sizeT=10&sizeZ=5&sizeC=3.fake
00:59:23 training_user_2/Blitz-0-Ice.ThreadPool.Server-6/2026-01/12/00-58-43.471/ test&sizeT=10&sizeZ=5&sizeC=3.fake
00:59:23 1
00:59:23 training_user_2/Blitz-0-Ice.ThreadPool.Server-6/2026-01/12/00-58-43.471/ test&sizeT=10&sizeZ=5&sizeC=3.fake
00:59:23 Current group: training_group
00:59:23 Permissions: READ-ONLY (rwr---)
00:59:23 Project 0 Owner: training_user-2 training_user-2
00:59:23 Project 1 Owner: training_user training_user
00:59:23 Project 0 Owner: training_user-2 training_user-2
00:59:23 Project 1 Owner: training_user training_user
00:59:23 Project 0 Owner: training_user-2 training_user-2
00:59:23 Project 1 Owner: training_user training_user
00:59:23 Project 0 Owner: training_user-2 training_user-2
00:59:23 Project 1 Owner: training_user training_user
00:59:23 Project 0 Owner: training_user-2 training_user-2
00:59:23 Project 1 Owner: training_user training_user
00:59:23 Project 0 Owner: training_user-2 training_user-2
00:59:23 Project 1 Owner: training_user training_user
00:59:23 Project 0 Owner: training_user-2 training_user-2
00:59:23 Project 1 Owner: training_user training_user
00:59:23 Project 0 Owner: training_user-2 training_user-2
00:59:23 Project 1 Owner: training_user training_user
00:59:23 Project 0 Owner: training_user-2 training_user-2
00:59:23 Project 1 Owner: training_user training_user
00:59:23 Project 0 Owner: training_user-2 training_user-2
00:59:23 Project 1 Owner: training_user training_user
00:59:23 Project 0 Owner: training_user-2 training_user-2
00:59:23 Project 1 Owner: training_user training_user
00:59:23 Project 0 Owner: training_user-2 training_user-2
00:59:23 Project 1 Owner: training_user training_user
00:59:23 Project 0 Owner: training_user-2 training_user-2
00:59:23 Project 1 Owner: training_user training_user
00:59:23 Project 0 Owner: training_user-2 training_user-2
00:59:23 Project 1 Owner: training_user training_user
00:59:23 Project 0 Owner: training_user-2 training_user-2
00:59:23 Project 1 Owner: training_user training_user
00:59:23 Project 0 Owner: training_user-2 training_user-2
00:59:23 Project 1 Owner: training_user training_user
00:59:23 Project 0 Owner: training_user-2 training_user-2
00:59:23 Project 1 Owner: training_user training_user
00:59:23 Image: <_ImageWrapper id=1153>
00:59:23 Image: <_ImageWrapper id=1153> Group: training_group 3
00:59:23 Image: <_ImageWrapper id=1153> Channel: 0
00:59:23 Channel: 1
00:59:23 Channel: 2
00:59:23
00:59:23
00:59:23 original_metadata
00:59:23 global_metadata
00:59:23 series_metadata
00:59:23
00:59:23 Plane at zct: 0 0 0
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00:59:23 [ 0 0 0 ... 253 254 255]
00:59:23 [ 0 0 0 ... 253 254 255]
00:59:23 ...
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00:59:23 [ 0 1 2 ... 253 254 255]]
00:59:23 shape: (512, 512)
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00:59:23
00:59:23 Z stack of tiles:
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00:59:23 Tile: (1, 0, 0, (50, 50, 10, 10)) min: 50 max: 59 sum: 5450
00:59:23 Tile: (2, 0, 0, (50, 50, 10, 10)) min: 50 max: 59 sum: 5450
00:59:23 Tile: (3, 0, 0, (50, 50, 10, 10)) min: 50 max: 59 sum: 5450
00:59:23 Tile: (4, 0, 0, (50, 50, 10, 10)) min: 50 max: 59 sum: 5450
00:59:23
00:59:23 Hyper stack of planes:
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00:59:23 plane zct: (2, 1, 0) min: 0 max: 255
00:59:23 plane zct: (2, 1, 1) min: 0 max: 255
00:59:23 plane zct: (2, 1, 2) min: 0 max: 255
00:59:23 plane zct: (2, 1, 3) min: 0 max: 255
00:59:23 plane zct: (2, 1, 4) min: 0 max: 255
00:59:23 plane zct: (2, 1, 5) min: 0 max: 255
00:59:23 plane zct: (2, 1, 6) min: 0 max: 255
00:59:23 plane zct: (2, 1, 7) min: 0 max: 255
00:59:23 plane zct: (2, 1, 8) min: 0 max: 255
00:59:23 plane zct: (2, 1, 9) min: 0 max: 255
00:59:23 plane zct: (2, 2, 0) min: 0 max: 255
00:59:23 plane zct: (2, 2, 1) min: 0 max: 255
00:59:23 plane zct: (2, 2, 2) min: 0 max: 255
00:59:23 plane zct: (2, 2, 3) min: 0 max: 255
00:59:23 plane zct: (2, 2, 4) min: 0 max: 255
00:59:23 plane zct: (2, 2, 5) min: 0 max: 255
00:59:23 plane zct: (2, 2, 6) min: 0 max: 255
00:59:23 plane zct: (2, 2, 7) min: 0 max: 255
00:59:23 plane zct: (2, 2, 8) min: 0 max: 255
00:59:23 plane zct: (2, 2, 9) min: 0 max: 255
00:59:23 plane zct: (3, 0, 0) min: 0 max: 255
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00:59:23 plane zct: (3, 0, 2) min: 0 max: 255
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00:59:23 plane zct: (3, 1, 2) min: 0 max: 255
00:59:23 plane zct: (3, 1, 3) min: 0 max: 255
00:59:23 plane zct: (3, 1, 4) min: 0 max: 255
00:59:23 plane zct: (3, 1, 5) min: 0 max: 255
00:59:23 plane zct: (3, 1, 6) min: 0 max: 255
00:59:23 plane zct: (3, 1, 7) min: 0 max: 255
00:59:23 plane zct: (3, 1, 8) min: 0 max: 255
00:59:23 plane zct: (3, 1, 9) min: 0 max: 255
00:59:23 plane zct: (3, 2, 0) min: 0 max: 255
00:59:23 plane zct: (3, 2, 1) min: 0 max: 255
00:59:23 plane zct: (3, 2, 2) min: 0 max: 255
00:59:23 plane zct: (3, 2, 3) min: 0 max: 255
00:59:23 plane zct: (3, 2, 4) min: 0 max: 255
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00:59:24
00:59:24 List Projects:
00:59:24 ==================================================
00:59:24 Project:1 Name:"Project 1" (owner=training_user)
00:59:24 Dataset:1 Name:"Dataset 1-1" (owner=training_user)
00:59:24 Image:1 Name:"test.fake" (owner=training_user)
00:59:24 Dataset:2 Name:"Dataset 1-2" (owner=training_user)
00:59:24 Image:12 Name:"New Image" (owner=training_user)
00:59:24 Image:2 Name:"test.fake" (owner=training_user)
00:59:24 Dataset:7 Name:"New Dataset" (owner=training_user)
00:59:24 Project:7 Name:"Project 1" (owner=training_user)
00:59:24 Dataset:13 Name:"Dataset 1-1" (owner=training_user)
00:59:24 Image:13 Name:"test.fake" (owner=training_user)
00:59:24 Dataset:14 Name:"Dataset 1-2" (owner=training_user)
00:59:24 Image:24 Name:"New Image" (owner=training_user)
00:59:24 Image:25 Name:"newImageFrom15" (owner=training_user)
00:59:24 Image:14 Name:"test.fake" (owner=training_user)
00:59:24 Dataset:19 Name:"New Dataset" (owner=training_user)
00:59:24 Dataset:29 Name:"new Name 1" (owner=training_user)
00:59:24 Dataset:30 Name:"new Name 2" (owner=training_user)
00:59:24 Project:51 Name:"Project 1" (owner=training_user)
00:59:24 Dataset:51 Name:"Dataset 1-1" (owner=training_user)
00:59:24 Image:551 Name:"test.fake" (owner=training_user)
00:59:24 Dataset:52 Name:"Dataset 1-2" (owner=training_user)
00:59:24 Image:562 Name:"New Image" (owner=training_user)
00:59:24 Image:563 Name:"newImageFrom553" (owner=training_user)
00:59:24 Image:552 Name:"test.fake" (owner=training_user)
00:59:24 Dataset:57 Name:"New Dataset" (owner=training_user)
00:59:24 Dataset:67 Name:"new Name 1" (owner=training_user)
00:59:24 Dataset:68 Name:"new Name 2" (owner=training_user)
00:59:24 Project:101 Name:"Project 1" (owner=training_user)
00:59:24 Dataset:101 Name:"Dataset 1-1" (owner=training_user)
00:59:24 Image:601 Name:"test.fake" (owner=training_user)
00:59:24 Dataset:102 Name:"Dataset 1-2" (owner=training_user)
00:59:24 Image:612 Name:"New Image" (owner=training_user)
00:59:24 Image:613 Name:"newImageFrom603" (owner=training_user)
00:59:24 Image:602 Name:"test.fake" (owner=training_user)
00:59:24 Dataset:107 Name:"New Dataset" (owner=training_user)
00:59:24 Dataset:117 Name:"new Name 1" (owner=training_user)
00:59:24 Dataset:118 Name:"new Name 2" (owner=training_user)
00:59:24 Project:151 Name:"Project 1" (owner=training_user)
00:59:24 Dataset:151 Name:"Dataset 1-1" (owner=training_user)
00:59:24 Image:651 Name:"test.fake" (owner=training_user)
00:59:24 Dataset:152 Name:"Dataset 1-2" (owner=training_user)
00:59:24 Image:662 Name:"New Image" (owner=training_user)
00:59:24 Image:663 Name:"newImageFrom653" (owner=training_user)
00:59:24 Image:652 Name:"test.fake" (owner=training_user)
00:59:24 Dataset:157 Name:"New Dataset" (owner=training_user)
00:59:24 Dataset:167 Name:"new Name 1" (owner=training_user)
00:59:24 Dataset:168 Name:"new Name 2" (owner=training_user)
00:59:24
00:59:24 List orphaned Datasets:
00:59:24 ==================================================
00:59:24 Dataset:3 Name:"Orphaned dataset 1" (owner=training_user)
00:59:24 Dataset:4 Name:"Orphaned dataset 2" (owner=training_user)
00:59:24 Dataset:5 Name:"Dataset 0" (owner=training_user-2)
00:59:24 Dataset:15 Name:"Orphaned dataset 1" (owner=training_user)
00:59:24 Dataset:16 Name:"Orphaned dataset 2" (owner=training_user)
00:59:24 Dataset:10 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:9 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:8 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:11 Name:"New Dataset" (owner=training_user)
00:59:24 Dataset:12 Name:"New Dataset2" (owner=training_user)
00:59:24 Dataset:17 Name:"Dataset 0" (owner=training_user-2)
00:59:24 Dataset:25 Name:"FileAnnotationDelete" (owner=training_user)
00:59:24 Dataset:22 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:21 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:20 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:23 Name:"New Dataset" (owner=training_user)
00:59:24 Dataset:24 Name:"New Dataset2" (owner=training_user)
00:59:24 Dataset:26 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:27 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:28 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:63 Name:"FileAnnotationDelete" (owner=training_user)
00:59:24 Dataset:64 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:65 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:66 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:53 Name:"Orphaned dataset 1" (owner=training_user)
00:59:24 Dataset:54 Name:"Orphaned dataset 2" (owner=training_user)
00:59:24 Dataset:55 Name:"Dataset 0" (owner=training_user-2)
00:59:24 Dataset:60 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:59 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:58 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:61 Name:"New Dataset" (owner=training_user)
00:59:24 Dataset:62 Name:"New Dataset2" (owner=training_user)
00:59:24 Dataset:103 Name:"Orphaned dataset 1" (owner=training_user)
00:59:24 Dataset:104 Name:"Orphaned dataset 2" (owner=training_user)
00:59:24 Dataset:105 Name:"Dataset 0" (owner=training_user-2)
00:59:24 Dataset:110 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:109 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:108 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:111 Name:"New Dataset" (owner=training_user)
00:59:24 Dataset:112 Name:"New Dataset2" (owner=training_user)
00:59:24 Dataset:113 Name:"FileAnnotationDelete" (owner=training_user)
00:59:24 Dataset:114 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:115 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:116 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:153 Name:"Orphaned dataset 1" (owner=training_user)
00:59:24 Dataset:154 Name:"Orphaned dataset 2" (owner=training_user)
00:59:24 Dataset:155 Name:"Dataset 0" (owner=training_user-2)
00:59:24 Dataset:160 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:159 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:158 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:161 Name:"New Dataset" (owner=training_user)
00:59:24 Dataset:162 Name:"New Dataset2" (owner=training_user)
00:59:24 Dataset:163 Name:"FileAnnotationDelete" (owner=training_user)
00:59:24 Dataset:164 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:165 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:166 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:203 Name:"Orphaned dataset 1" (owner=training_user)
00:59:24 Dataset:204 Name:"Orphaned dataset 2" (owner=training_user)
00:59:24 Dataset:205 Name:"Dataset 0" (owner=training_user-2)
00:59:24 Dataset:210 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:209 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:208 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:211 Name:"New Dataset" (owner=training_user)
00:59:24 Dataset:212 Name:"New Dataset2" (owner=training_user)
00:59:24 Dataset:253 Name:"Orphaned dataset 1" (owner=training_user)
00:59:24 Dataset:254 Name:"Orphaned dataset 2" (owner=training_user)
00:59:24 Dataset:255 Name:"Dataset 0" (owner=training_user-2)
00:59:24 Dataset:260 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:259 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:258 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:261 Name:"New Dataset" (owner=training_user)
00:59:24 Dataset:262 Name:"New Dataset2" (owner=training_user)
00:59:24 Dataset:303 Name:"Orphaned dataset 1" (owner=training_user)
00:59:24 Dataset:304 Name:"Orphaned dataset 2" (owner=training_user)
00:59:24 Dataset:305 Name:"Dataset 0" (owner=training_user-2)
00:59:24 Dataset:310 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:309 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:308 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:311 Name:"New Dataset" (owner=training_user)
00:59:24 Dataset:312 Name:"New Dataset2" (owner=training_user)
00:59:24 Dataset:315 Name:"Orphaned dataset 1" (owner=training_user)
00:59:24 Dataset:316 Name:"Orphaned dataset 2" (owner=training_user)
00:59:24 Dataset:317 Name:"Dataset 0" (owner=training_user-2)
00:59:24 Dataset:460 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:459 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:458 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:461 Name:"New Dataset" (owner=training_user)
00:59:24 Dataset:462 Name:"New Dataset2" (owner=training_user)
00:59:24 Dataset:322 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:321 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:320 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:323 Name:"New Dataset" (owner=training_user)
00:59:24 Dataset:324 Name:"New Dataset2" (owner=training_user)
00:59:24 Dataset:327 Name:"Orphaned dataset 1" (owner=training_user)
00:59:24 Dataset:328 Name:"Orphaned dataset 2" (owner=training_user)
00:59:24 Dataset:329 Name:"Dataset 0" (owner=training_user-2)
00:59:24 Dataset:338 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:339 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:340 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:334 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:333 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:332 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:335 Name:"New Dataset" (owner=training_user)
00:59:24 Dataset:336 Name:"New Dataset2" (owner=training_user)
00:59:24 Dataset:337 Name:"FileAnnotationDelete" (owner=training_user)
00:59:24 Dataset:353 Name:"Orphaned dataset 1" (owner=training_user)
00:59:24 Dataset:354 Name:"Orphaned dataset 2" (owner=training_user)
00:59:24 Dataset:355 Name:"Dataset 0" (owner=training_user-2)
00:59:24 Dataset:364 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:365 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:366 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:360 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:359 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:358 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:361 Name:"New Dataset" (owner=training_user)
00:59:24 Dataset:362 Name:"New Dataset2" (owner=training_user)
00:59:24 Dataset:363 Name:"FileAnnotationDelete" (owner=training_user)
00:59:24 Dataset:463 Name:"FileAnnotationDelete" (owner=training_user)
00:59:24 Dataset:453 Name:"Orphaned dataset 1" (owner=training_user)
00:59:24 Dataset:454 Name:"Orphaned dataset 2" (owner=training_user)
00:59:24 Dataset:455 Name:"Dataset 0" (owner=training_user-2)
00:59:24 Dataset:464 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:465 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:466 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:403 Name:"Orphaned dataset 1" (owner=training_user)
00:59:24 Dataset:404 Name:"Orphaned dataset 2" (owner=training_user)
00:59:24 Dataset:410 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:409 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:408 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:411 Name:"New Dataset" (owner=training_user)
00:59:24 Dataset:412 Name:"New Dataset2" (owner=training_user)
00:59:24 Dataset:413 Name:"FileAnnotationDelete" (owner=training_user)
00:59:24 Dataset:405 Name:"Dataset 0" (owner=training_user-2)
00:59:24 Dataset:414 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:415 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:416 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:503 Name:"Orphaned dataset 1" (owner=training_user)
00:59:24 Dataset:504 Name:"Orphaned dataset 2" (owner=training_user)
00:59:24 Dataset:505 Name:"Dataset 0" (owner=training_user-2)
00:59:24 Dataset:510 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:509 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:508 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:511 Name:"New Dataset" (owner=training_user)
00:59:24 Dataset:512 Name:"New Dataset2" (owner=training_user)
00:59:24 Dataset:513 Name:"FileAnnotationDelete" (owner=training_user)
00:59:24 Dataset:514 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:515 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:516 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:655 Name:"Dataset 0" (owner=training_user-2)
00:59:24 Dataset:553 Name:"Orphaned dataset 1" (owner=training_user)
00:59:24 Dataset:554 Name:"Orphaned dataset 2" (owner=training_user)
00:59:24 Dataset:555 Name:"Dataset 0" (owner=training_user-2)
00:59:24 Dataset:560 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:559 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:558 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:561 Name:"New Dataset" (owner=training_user)
00:59:24 Dataset:562 Name:"New Dataset2" (owner=training_user)
00:59:24 Dataset:563 Name:"FileAnnotationDelete" (owner=training_user)
00:59:24 Dataset:564 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:565 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:566 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:603 Name:"Orphaned dataset 1" (owner=training_user)
00:59:24 Dataset:604 Name:"Orphaned dataset 2" (owner=training_user)
00:59:24 Dataset:605 Name:"Dataset 0" (owner=training_user-2)
00:59:24 Dataset:610 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:609 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:608 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:611 Name:"New Dataset" (owner=training_user)
00:59:24 Dataset:612 Name:"New Dataset2" (owner=training_user)
00:59:24 Dataset:613 Name:"FileAnnotationDelete" (owner=training_user)
00:59:24 Dataset:614 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:615 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:616 Name:"MyDataset" (owner=training_user)
00:59:24 Dataset:653 Name:"Orphaned dataset 1" (owner=training_user)
00:59:24 Dataset:654 Name:"Orphaned dataset 2" (owner=training_user)
00:59:24
00:59:24 Images in Dataset: 652
00:59:24 ==================================================
00:59:24 Image:1152 Name:"test.fake" (owner=training_user)
00:59:24
00:59:24 Image:1153
00:59:24 ==================================================
00:59:24 test&sizeT=10&sizeZ=5&sizeC=3.fake
00:59:24 X: 512
00:59:24 Y: 512
00:59:24 Z: 5
00:59:24 C: 3
00:59:24 T: 10
00:59:24 Channel: 0 Color: (255, 0, 0)
00:59:24 Lookup table: None
00:59:24 Is reverse intensity? False
00:59:24 Channel: 1 Color: (0, 255, 0)
00:59:24 Lookup table: None
00:59:24 Is reverse intensity? False
00:59:24 Channel: 2 Color: (0, 0, 255)
00:59:24 Lookup table: None
00:59:24 Is reverse intensity? False
00:59:24 Pixel Size X: None
00:59:24
00:59:24 List Screens:
00:59:24 ==================================================
00:59:24 Screen:1 Name:"Screen" (owner=training_user)
00:59:24 Plate:1 Name:"Plate" (owner=training_user)
00:59:24 Plate:2 Name:"Plate Name 0" (owner=training_user)
00:59:24 Screen:4 Name:"Screen" (owner=training_user)
00:59:24 Plate:5 Name:"Plate" (owner=training_user)
00:59:24 Plate:6 Name:"Plate Name 0" (owner=training_user)
00:59:24 Screen:51 Name:"Screen" (owner=training_user)
00:59:24 Plate:51 Name:"Plate" (owner=training_user)
00:59:24 Plate:52 Name:"Plate Name 0" (owner=training_user)
00:59:24 Screen:101 Name:"Screen" (owner=training_user)
00:59:24 Plate:101 Name:"Plate" (owner=training_user)
00:59:24 Plate:102 Name:"Plate Name 0" (owner=training_user)
00:59:24 Screen:151 Name:"Screen" (owner=training_user)
00:59:24 Plate:151 Name:"Plate" (owner=training_user)
00:59:24 Plate:152 Name:"Plate Name 0" (owner=training_user)
00:59:24 Screen:201 Name:"Screen" (owner=training_user)
00:59:24 Plate:201 Name:"Plate" (owner=training_user)
00:59:24 Plate:202 Name:"Plate Name 0" (owner=training_user)
00:59:24 Screen:251 Name:"Screen" (owner=training_user)
00:59:24 Plate:251 Name:"Plate" (owner=training_user)
00:59:24 Plate:252 Name:"Plate Name 0" (owner=training_user)
00:59:24 Screen:301 Name:"Screen" (owner=training_user)
00:59:24 Plate:301 Name:"Plate" (owner=training_user)
00:59:24 Plate:302 Name:"Plate Name 0" (owner=training_user)
00:59:24 Screen:304 Name:"Screen" (owner=training_user)
00:59:24 Plate:305 Name:"Plate" (owner=training_user)
00:59:24 Plate:306 Name:"Plate Name 0" (owner=training_user)
00:59:24 Screen:307 Name:"Screen" (owner=training_user)
00:59:24 Plate:309 Name:"Plate" (owner=training_user)
00:59:28 Plate:310 Name:"Plate Name 0" (owner=training_user)
00:59:28 Screen:351 Name:"Screen" (owner=training_user)
00:59:28 Plate:351 Name:"Plate" (owner=training_user)
00:59:28 Plate:352 Name:"Plate Name 0" (owner=training_user)
00:59:28 Screen:401 Name:"Screen" (owner=training_user)
00:59:28 Plate:401 Name:"Plate" (owner=training_user)
00:59:28 Plate:402 Name:"Plate Name 0" (owner=training_user)
00:59:28 Screen:451 Name:"Screen" (owner=training_user)
00:59:28 Plate:451 Name:"Plate" (owner=training_user)
00:59:28 Plate:452 Name:"Plate Name 0" (owner=training_user)
00:59:28 Screen:501 Name:"Screen" (owner=training_user)
00:59:28 Plate:501 Name:"Plate" (owner=training_user)
00:59:28 Plate:502 Name:"Plate Name 0" (owner=training_user)
00:59:28 Screen:551 Name:"Screen" (owner=training_user)
00:59:28 Plate:551 Name:"Plate" (owner=training_user)
00:59:28 Plate:552 Name:"Plate Name 0" (owner=training_user)
00:59:28 Screen:601 Name:"Screen" (owner=training_user)
00:59:28 Plate:601 Name:"Plate" (owner=training_user)
00:59:28 Plate:602 Name:"Plate Name 0" (owner=training_user)
00:59:28 Screen:651 Name:"Screen" (owner=training_user)
00:59:28 Plate:651 Name:"Plate" (owner=training_user)
00:59:28 Plate:652 Name:"Plate Name 0" (owner=training_user)
00:59:28 Screen:2 Name:"Screen" (owner=training_user-2)
00:59:28 Screen:5 Name:"Screen" (owner=training_user-2)
00:59:28 Screen:52 Name:"Screen" (owner=training_user-2)
00:59:28 Screen:102 Name:"Screen" (owner=training_user-2)
00:59:28 Screen:152 Name:"Screen" (owner=training_user-2)
00:59:28 Screen:202 Name:"Screen" (owner=training_user-2)
00:59:28 Screen:252 Name:"Screen" (owner=training_user-2)
00:59:28 Screen:302 Name:"Screen" (owner=training_user-2)
00:59:28 Screen:305 Name:"Screen" (owner=training_user-2)
00:59:28 Screen:308 Name:"Screen" (owner=training_user-2)
00:59:28 Screen:352 Name:"Screen" (owner=training_user-2)
00:59:28 Screen:402 Name:"Screen" (owner=training_user-2)
00:59:28 Screen:452 Name:"Screen" (owner=training_user-2)
00:59:28 Screen:502 Name:"Screen" (owner=training_user-2)
00:59:28 Screen:552 Name:"Screen" (owner=training_user-2)
00:59:28 Screen:602 Name:"Screen" (owner=training_user-2)
00:59:28 Screen:652 Name:"Screen" (owner=training_user-2)
00:59:28
00:59:28 Plate:652
00:59:28 ==================================================
00:59:28
00:59:28 Number of fields: (0, 0)
00:59:28
00:59:28 Grid size: {'rows': 1, 'columns': 3}
00:59:28
00:59:28 Wells in Plate: Plate Name 0
00:59:28 Well: 0 1 Fields: 1
00:59:28 Image: SPW&plates=1&plateRows=1&plateCols=3&fields=1&plateAcqs=1.fake [SPW 2] 1156
00:59:28 Well: 0 0 Fields: 1
00:59:28 Image: SPW&plates=1&plateRows=1&plateCols=3&fields=1&plateAcqs=1.fake [SPW] 1154
00:59:28 Well: 0 2 Fields: 1
00:59:28 Image: SPW&plates=1&plateRows=1&plateCols=3&fields=1&plateAcqs=1.fake [SPW 3] 1155
00:59:28 701 <class 'omero.model.MapAnnotationI'>
00:59:28 added by training_user
00:59:28 Image ID: 1153
00:59:28 Annotation ID: 701
00:59:28 1153
00:59:28 Channel rendering settings:
00:59:28 Name: 0
00:59:28 Color: FF0000
00:59:28 Active: True
00:59:28 Levels: 0.0 - 255.0
00:59:28 Name: 1
00:59:28 Color: 00FF00
00:59:28 Active: True
00:59:28 Levels: 0.0 - 255.0
00:59:28 Name: 2
00:59:28 Color: 0000FF
00:59:28 Active: True
00:59:28 Levels: 0.0 - 255.0
00:59:28 isGreyscaleRenderingModel: False
00:59:28 Default Z/T positions:
00:59:28 Z = 2, T = 0
00:59:28 Rendering Defs on Image:
00:59:28 ID: 753 (owner: training_user training_user)
00:59:28 Adding a rectangle at theZ: 2, theT: 0, X: 50, Y: 200, width: 100, height: 50
00:59:28 ROI: ID: 652
00:59:28 Shape: id 771 theT 0 theZ 2 textValue test-Rectangle type Rectangle x 50.0 y 200.0 width 100.0 height 50.0
00:59:28 Shape: id 772 theT 0 theZ 2 textValue test-Ellipse type Ellipse x 200.0 y 50.0 radiusX 100.0 radiusY 50.0
00:59:28 ROI: ID: 653
00:59:28 Shape: id 773 theT 0 theZ 2 textValue test-Line type Line x1 50.0 x2 150.0 y1 200.0 y2 250.0
00:59:28 ROI: ID: 654
00:59:28 Shape: id 774 theT 0 theZ 0 textValue test-Mask type Mask x 50.0 y 50.0 width 100.0 height 100.0
00:59:28 ROI: ID: 655
00:59:28 Shape: id 775 theT 0 theZ 2 textValue test-Point type Point x 50.0 y 200.0
00:59:28 ROI: ID: 656
00:59:28 <class 'omero.model.PolygonI'> Not supported by this code
00:59:28 Shape: id 776 theT 0 theZ 2 textValue test-Polygon
00:59:28 Points 10000 Min 50.0 Mean 99.5 Max 149.0 Sum 149.0 StdDev 28.867513459481287
00:59:28 Points 101 Min 50.0 Mean 100.0 Max 150.0 Sum 150.0 StdDev 29.300170647967224
00:59:28 Points 15695 Min 0.0 Mean 157.55208665179993 Max 255.0 Sum 255.0 StdDev 72.87073453134771
00:59:28 Points 1 Min 50.0 Mean 50.0 Max 50.0 Sum 50.0 StdDev 0.0
00:59:28 Points 25145 Min 10.0 Mean 130.03957049115132 Max 249.0 Sum 249.0 StdDev 57.70727405876767
00:59:28 Points 5000 Min 50.0 Mean 99.5 Max 149.0 Sum 149.0 StdDev 28.86895708779012
00:59:28 Removing Shape from ROI...
00:59:28 Deleting ROI: 657
00:59:28 Table Columns:
00:59:28 Uid
00:59:28 MyStringColumnInit
00:59:28 Row count: 10
00:59:28
00:59:28 Get All Data for rows: [3, 5, 7]
00:59:28 Data for Column: Uid
00:59:28 1
00:59:28 2
00:59:28 3
00:59:28 4
00:59:28 5
00:59:28 6
00:59:28 7
00:59:28 8
00:59:28 9
00:59:28 10
00:59:28 Data for Column: MyStringColumnInit
00:59:28 one
00:59:28 two
00:59:28 three
00:59:28 four
00:59:28 five
00:59:28 six
00:59:28 seven
00:59:28 eight
00:59:28 nine
00:59:28 ten
00:59:28
00:59:28 Get All Data for rows with slice: [3, 5, 7]
00:59:28 Data for Column: Uid
00:59:28 4
00:59:28 6
00:59:28 8
00:59:28 Data for Column: MyStringColumnInit
00:59:28 four
00:59:28 six
00:59:28 eight
00:59:28
00:59:28 Get Data for cols: [1] and between rows: 3 - 7
00:59:28 Data for Column: MyStringColumnInit
00:59:28 four
00:59:28 five
00:59:28 six
00:59:28 seven
00:59:28
00:59:28 Get Data for cols: [1] and between rows: 3 - 7 with slice
00:59:28 Data for Column: MyStringColumnInit
00:59:28 four
00:59:28 five
00:59:28 six
00:59:28 seven
00:59:28 Query Results for Column: Uid
00:59:28 3
00:59:28 4
00:59:28 5
00:59:28 6
00:59:28 7
00:59:28 8
00:59:28 Query Results for Column: MyStringColumnInit
00:59:28 three
00:59:28 four
00:59:28 five
00:59:28 six
00:59:28 seven
00:59:28 eight
00:59:28 Opened table with row-count: 10
00:59:28 New dataset, Id: 657
00:59:28 {'TagAnnotation': 1, 'FileAnnotation': 0, 'CommentAnnotation': 0, 'LongAnnotation': 0, 'MapAnnotation': 1, 'OtherAnnotation': 0}
00:59:28 705 <class 'omero.model.TagAnnotationI'> added by training_user
00:59:28 Tag value: New Tag
00:59:28 706 <class 'omero.model.MapAnnotationI'> added by training_user
00:59:28
00:59:28 Creating an OriginalFile and FileAnnotation
00:59:28 Attaching FileAnnotation to Dataset: File ID: 707 , README.txt Size: 15
00:59:28
00:59:28 Annotations on Dataset: New Dataset
00:59:28 File ID: 1700 README.txt Size: 15
00:59:28
00:59:28 Downloading file to /home/omero/workspace/OMERO-training/openmicroscopy/examples/Training/python/download/README.txt ...
00:59:28 File downloaded!
00:59:28 557 README.txt
00:59:28 157 README.txt
00:59:28 507 README.txt
00:59:28 657 README.txt
00:59:28 607 README.txt
00:59:28 7 README.txt
00:59:28 333 README.txt
00:59:28 207 README.txt
00:59:28 457 README.txt
00:59:28 707 README.txt
00:59:28 307 README.txt
00:59:28 320 README.txt
00:59:28 407 README.txt
00:59:28 20 README.txt
00:59:28 257 README.txt
00:59:28 107 README.txt
00:59:28 57 README.txt
00:59:28 Found Annotation with namespace: imperial.training.demo
00:59:28 Plane: 0 0 0
00:59:28 Applying channel Names: ['0', '1', '2'] Colors: [(255, 0, 0), (0, 255, 0), (0, 0, 255)]
00:59:28 [(0.0, 255.0), (0.0, 255.0), (0.0, 255.0)]
00:59:28
00:59:28 List Datasets:
00:59:28 ID: 660 Name: MyDataset
00:59:28 ID: 659 Name: MyDataset
00:59:28 ID: 658 Name: MyDataset
00:59:28 ID: 616 Name: MyDataset
00:59:28 ID: 615 Name: MyDataset
00:59:28 ID: 614 Name: MyDataset
00:59:28 ID: 610 Name: MyDataset
00:59:28 ID: 609 Name: MyDataset
00:59:28 ID: 608 Name: MyDataset
00:59:28 ID: 566 Name: MyDataset
00:59:28 ID: 565 Name: MyDataset
00:59:28 ID: 564 Name: MyDataset
00:59:28 ID: 560 Name: MyDataset
00:59:28 ID: 559 Name: MyDataset
00:59:28 ID: 558 Name: MyDataset
00:59:28 ID: 516 Name: MyDataset
00:59:28 ID: 515 Name: MyDataset
00:59:28 ID: 514 Name: MyDataset
00:59:28 ID: 510 Name: MyDataset
00:59:28 ID: 509 Name: MyDataset
00:59:28 ID: 508 Name: MyDataset
00:59:28 ID: 466 Name: MyDataset
00:59:28 ID: 465 Name: MyDataset
00:59:28 ID: 464 Name: MyDataset
00:59:28 ID: 460 Name: MyDataset
00:59:28 ID: 459 Name: MyDataset
00:59:28 ID: 458 Name: MyDataset
00:59:28 ID: 416 Name: MyDataset
00:59:28 ID: 415 Name: MyDataset
00:59:28 ID: 414 Name: MyDataset
00:59:28 ID: 410 Name: MyDataset
00:59:28 ID: 409 Name: MyDataset
00:59:28 ID: 408 Name: MyDataset
00:59:28 ID: 366 Name: MyDataset
00:59:28 ID: 365 Name: MyDataset
00:59:28 ID: 364 Name: MyDataset
00:59:28 ID: 360 Name: MyDataset
00:59:28 ID: 359 Name: MyDataset
00:59:28 ID: 358 Name: MyDataset
00:59:28 ID: 340 Name: MyDataset
00:59:28 ID: 339 Name: MyDataset
00:59:28 ID: 338 Name: MyDataset
00:59:28 ID: 334 Name: MyDataset
00:59:28 ID: 333 Name: MyDataset
00:59:28 ID: 332 Name: MyDataset
00:59:28 ID: 322 Name: MyDataset
00:59:28 ID: 321 Name: MyDataset
00:59:28 ID: 320 Name: MyDataset
00:59:28 ID: 310 Name: MyDataset
00:59:28 ID: 309 Name: MyDataset
00:59:28 ID: 308 Name: MyDataset
00:59:28 ID: 260 Name: MyDataset
00:59:28 ID: 259 Name: MyDataset
00:59:28 ID: 258 Name: MyDataset
00:59:28 ID: 210 Name: MyDataset
00:59:28 ID: 209 Name: MyDataset
00:59:28 ID: 208 Name: MyDataset
00:59:28 ID: 166 Name: MyDataset
00:59:28 ID: 165 Name: MyDataset
00:59:28 ID: 164 Name: MyDataset
00:59:28 ID: 160 Name: MyDataset
00:59:28 ID: 159 Name: MyDataset
00:59:28 ID: 158 Name: MyDataset
00:59:28 ID: 116 Name: MyDataset
00:59:28 ID: 115 Name: MyDataset
00:59:28 ID: 114 Name: MyDataset
00:59:28 ID: 110 Name: MyDataset
00:59:28 ID: 109 Name: MyDataset
00:59:28 ID: 108 Name: MyDataset
00:59:28 ID: 66 Name: MyDataset
00:59:28 ID: 65 Name: MyDataset
00:59:28 ID: 64 Name: MyDataset
00:59:28 ID: 60 Name: MyDataset
00:59:28 ID: 59 Name: MyDataset
00:59:28 ID: 58 Name: MyDataset
00:59:28 ID: 28 Name: MyDataset
00:59:28 ID: 27 Name: MyDataset
00:59:28 ID: 26 Name: MyDataset
00:59:31 ID: 22 Name: MyDataset
00:59:31 ID: 21 Name: MyDataset
00:59:31 ID: 20 Name: MyDataset
00:59:31 ID: 10 Name: MyDataset
00:59:31 ID: 9 Name: MyDataset
00:59:31 ID: 8 Name: MyDataset
00:59:31
00:59:31 List Tags:
00:59:31 ID: 8 Text: MyTag Desc: MyTag 0
00:59:31 ID: 9 Text: MyTag Desc: MyTag 1
00:59:31 ID: 10 Text: MyTag Desc: MyTag 2
00:59:31 ID: 21 Text: MyTag Desc: MyTag 0
00:59:31 ID: 22 Text: MyTag Desc: MyTag 1
00:59:31 ID: 23 Text: MyTag Desc: MyTag 2
00:59:31 ID: 29 Text: MyTag Desc: MyTag 0
00:59:31 ID: 30 Text: MyTag Desc: MyTag 1
00:59:31 ID: 31 Text: MyTag Desc: MyTag 2
00:59:31 ID: 58 Text: MyTag Desc: MyTag 0
00:59:31 ID: 59 Text: MyTag Desc: MyTag 1
00:59:31 ID: 60 Text: MyTag Desc: MyTag 2
00:59:31 ID: 66 Text: MyTag Desc: MyTag 0
00:59:31 ID: 67 Text: MyTag Desc: MyTag 1
00:59:31 ID: 68 Text: MyTag Desc: MyTag 2
00:59:31 ID: 108 Text: MyTag Desc: MyTag 0
00:59:31 ID: 109 Text: MyTag Desc: MyTag 1
00:59:31 ID: 110 Text: MyTag Desc: MyTag 2
00:59:31 ID: 116 Text: MyTag Desc: MyTag 0
00:59:31 ID: 117 Text: MyTag Desc: MyTag 1
00:59:31 ID: 118 Text: MyTag Desc: MyTag 2
00:59:31 ID: 158 Text: MyTag Desc: MyTag 0
00:59:31 ID: 159 Text: MyTag Desc: MyTag 1
00:59:31 ID: 160 Text: MyTag Desc: MyTag 2
00:59:31 ID: 166 Text: MyTag Desc: MyTag 0
00:59:31 ID: 167 Text: MyTag Desc: MyTag 1
00:59:31 ID: 168 Text: MyTag Desc: MyTag 2
00:59:31 ID: 208 Text: MyTag Desc: MyTag 0
00:59:31 ID: 209 Text: MyTag Desc: MyTag 1
00:59:31 ID: 210 Text: MyTag Desc: MyTag 2
00:59:31 ID: 258 Text: MyTag Desc: MyTag 0
00:59:31 ID: 259 Text: MyTag Desc: MyTag 1
00:59:31 ID: 260 Text: MyTag Desc: MyTag 2
00:59:31 ID: 308 Text: MyTag Desc: MyTag 0
00:59:31 ID: 309 Text: MyTag Desc: MyTag 1
00:59:31 ID: 310 Text: MyTag Desc: MyTag 2
00:59:31 ID: 321 Text: MyTag Desc: MyTag 0
00:59:31 ID: 322 Text: MyTag Desc: MyTag 1
00:59:31 ID: 323 Text: MyTag Desc: MyTag 2
00:59:31 ID: 334 Text: MyTag Desc: MyTag 0
00:59:31 ID: 335 Text: MyTag Desc: MyTag 1
00:59:31 ID: 336 Text: MyTag Desc: MyTag 2
00:59:31 ID: 342 Text: MyTag Desc: MyTag 0
00:59:31 ID: 343 Text: MyTag Desc: MyTag 1
00:59:31 ID: 344 Text: MyTag Desc: MyTag 2
00:59:31 ID: 408 Text: MyTag Desc: MyTag 0
00:59:31 ID: 409 Text: MyTag Desc: MyTag 1
00:59:31 ID: 410 Text: MyTag Desc: MyTag 2
00:59:31 ID: 416 Text: MyTag Desc: MyTag 0
00:59:31 ID: 417 Text: MyTag Desc: MyTag 1
00:59:31 ID: 418 Text: MyTag Desc: MyTag 2
00:59:31 ID: 458 Text: MyTag Desc: MyTag 0
00:59:31 ID: 459 Text: MyTag Desc: MyTag 1
00:59:31 ID: 460 Text: MyTag Desc: MyTag 2
00:59:31 ID: 466 Text: MyTag Desc: MyTag 0
00:59:31 ID: 467 Text: MyTag Desc: MyTag 1
00:59:31 ID: 468 Text: MyTag Desc: MyTag 2
00:59:31 ID: 508 Text: MyTag Desc: MyTag 0
00:59:31 ID: 509 Text: MyTag Desc: MyTag 1
00:59:31 ID: 510 Text: MyTag Desc: MyTag 2
00:59:31 ID: 516 Text: MyTag Desc: MyTag 0
00:59:31 ID: 517 Text: MyTag Desc: MyTag 1
00:59:31 ID: 518 Text: MyTag Desc: MyTag 2
00:59:31 ID: 558 Text: MyTag Desc: MyTag 0
00:59:31 ID: 559 Text: MyTag Desc: MyTag 1
00:59:31 ID: 560 Text: MyTag Desc: MyTag 2
00:59:31 ID: 566 Text: MyTag Desc: MyTag 0
00:59:31 ID: 567 Text: MyTag Desc: MyTag 1
00:59:31 ID: 568 Text: MyTag Desc: MyTag 2
00:59:31 ID: 608 Text: MyTag Desc: MyTag 0
00:59:31 ID: 609 Text: MyTag Desc: MyTag 1
00:59:31 ID: 610 Text: MyTag Desc: MyTag 2
00:59:31 ID: 616 Text: MyTag Desc: MyTag 0
00:59:31 ID: 617 Text: MyTag Desc: MyTag 1
00:59:31 ID: 618 Text: MyTag Desc: MyTag 2
00:59:31 ID: 658 Text: MyTag Desc: MyTag 0
00:59:31 ID: 659 Text: MyTag Desc: MyTag 1
00:59:31 ID: 660 Text: MyTag Desc: MyTag 2
00:59:31 ID: 666 Text: MyTag Desc: MyTag 0
00:59:31 ID: 667 Text: MyTag Desc: MyTag 1
00:59:31 ID: 668 Text: MyTag Desc: MyTag 2
00:59:31 ID: 708 Text: MyTag Desc: MyTag 0
00:59:31 ID: 709 Text: MyTag Desc: MyTag 1
00:59:31 ID: 710 Text: MyTag Desc: MyTag 2
00:59:31 New dataset, Id: 661
00:59:31 New dataset 2, Id: 662
00:59:31 test&sizeT=10&sizeZ=5&sizeC=3.fake
00:59:31 Tile at zct tile: 2 0 0 (5, 5, 100, 100)
00:59:31 [[ 0 0 0 ... 102 103 104]
00:59:31 [ 0 0 0 ... 102 103 104]
00:59:31 [ 0 0 0 ... 102 103 104]
00:59:31 ...
00:59:31 [ 5 6 7 ... 102 103 104]
00:59:31 [ 5 6 7 ... 102 103 104]
00:59:31 [ 5 6 7 ... 102 103 104]]
00:59:31 shape: (100, 100)
00:59:31 min: 0 max: 104 pixel type: uint8
00:59:31 Average : 53.9125
00:59:31 Getting data for T, tile: 0 (256, 0, 10, 512)
00:59:31 Getting data for T, tile: 1 (256, 0, 10, 512)
00:59:31 Getting data for T, tile: 2 (256, 0, 10, 512)
00:59:31 Getting data for T, tile: 3 (256, 0, 10, 512)
00:59:31 Getting data for T, tile: 4 (256, 0, 10, 512)
00:59:31 Getting data for T, tile: 5 (256, 0, 10, 512)
00:59:31 Getting data for T, tile: 6 (256, 0, 10, 512)
00:59:31 Getting data for T, tile: 7 (256, 0, 10, 512)
00:59:31 Getting data for T, tile: 8 (256, 0, 10, 512)
00:59:31 Getting data for T, tile: 9 (256, 0, 10, 512)
00:59:31 kymograph_data (512, 100)
00:59:31 Attaching kymograph.png to image
00:59:31 test&sizeT=10&sizeZ=5&sizeC=3.fake
00:59:31 Tile at zct tile: 2 0 0 (5, 5, 100, 100)
00:59:31 [[ 0 0 0 ... 102 103 104]
00:59:31 [ 0 0 0 ... 102 103 104]
00:59:31 [ 0 0 0 ... 102 103 104]
00:59:31 ...
00:59:31 [ 5 6 7 ... 102 103 104]
00:59:31 [ 5 6 7 ... 102 103 104]
00:59:31 [ 5 6 7 ... 102 103 104]]
00:59:31 shape: (100, 100)
00:59:31 min: 0 max: 104 pixel type: uint8
00:59:31 Average : 53.9125
00:59:31 Getting data for T, tile: 0 (256, 0, 10, 512)
00:59:31 Getting data for T, tile: 1 (256, 0, 10, 512)
00:59:31 Getting data for T, tile: 2 (256, 0, 10, 512)
00:59:31 Getting data for T, tile: 3 (256, 0, 10, 512)
00:59:31 Getting data for T, tile: 4 (256, 0, 10, 512)
00:59:31 Getting data for T, tile: 5 (256, 0, 10, 512)
00:59:31 Getting data for T, tile: 6 (256, 0, 10, 512)
00:59:31 Getting data for T, tile: 7 (256, 0, 10, 512)
00:59:31 Getting data for T, tile: 8 (256, 0, 10, 512)
00:59:31 Getting data for T, tile: 9 (256, 0, 10, 512)
00:59:31 kymograph_data (512, 100)
00:59:31 Attaching kymograph.png to image
00:59:31 No file downloaded. Project not rated.
00:59:31 New image, Id: 1162
00:59:31 Starting at: http://nginx/web/api/
00:59:31 CSRF token nkzJiSpU51X2OJpCYRM4VceLtVII1BhO
00:59:31 Servers:
00:59:31 -id: 1
00:59:31 name: omero
00:59:31 host: omero
00:59:31 port: 4064
00:59:31 -id: 2
00:59:31 name: testintegration
00:59:31 host: testintegration
00:59:31 port: 14064
00:59:31 eventContext {'sessionId': 1636, 'sessionUuid': '8ead0458-0a76-4963-b265-7217e5af45a0', 'userId': 2, 'userName': 'training_user', 'groupId': 3, 'groupName': 'training_group', 'isAdmin': False, 'eventId': -1, 'eventType': 'User', 'memberOfGroups': [3, 4, 1], 'leaderOfGroups': []}
00:59:31 Projects:
00:59:31 2 Project 0
00:59:31 3 Project 0
00:59:31 Created Project: 656 API TEST foo
00:59:31 {'data': {'@type': 'http://www.openmicroscopy.org/Schemas/OME/2016-06#Project', '@id': 656, 'omero:details': {'@type': 'TBD#Details', 'owner': {'@type': 'http://www.openmicroscopy.org/Schemas/OME/2016-06#Experimenter', '@id': 2, 'omero:details': {'@type': 'TBD#Details', 'permissions': {'@type': 'TBD#Permissions', 'perm': 'rw----', 'canAnnotate': True, 'canDelete': False, 'canEdit': False, 'canLink': True, 'isWorldWrite': False, 'isWorldRead': False, 'isGroupWrite': False, 'isGroupRead': False, 'isGroupAnnotate': False, 'isUserWrite': True, 'isUserRead': True}}, 'FirstName': 'training_user', 'MiddleName': '', 'LastName': 'training_user', 'Email': '', 'Institution': '', 'UserName': 'training_user'}, 'group': {'@type': 'http://www.openmicroscopy.org/Schemas/OME/2016-06#ExperimenterGroup', '@id': 3, 'omero:details': {'@type': 'TBD#Details', 'permissions': {'@type': 'TBD#Permissions', 'perm': 'rwr---', 'canAnnotate': True, 'canDelete': False, 'canEdit': False, 'canLink': True, 'isWorldWrite': False, 'isWorldRead': False, 'isGroupWrite': False, 'isGroupRead': True, 'isGroupAnnotate': False, 'isUserWrite': True, 'isUserRead': True}}, 'Name': 'training_group'}, 'permissions': {'@type': 'TBD#Permissions', 'perm': 'rwr---', 'canAnnotate': True, 'canDelete': True, 'canEdit': True, 'canLink': True, 'isWorldWrite': False, 'isWorldRead': False, 'isGroupWrite': False, 'isGroupRead': True, 'isGroupAnnotate': False, 'isUserWrite': True, 'isUserRead': True}}, 'Name': 'API TEST foo', 'url:datasets': 'http://nginx/web/api/v0/m/projects/656/datasets/'}}
00:59:31 !! 01/12/26 00:59:31.752 error: communicator not destroyed during global destruction.+ deactivate
00:59:31 + '[' -n /opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
00:59:31 + PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
00:59:31 + export PATH
00:59:31 + unset _OLD_VIRTUAL_PATH
00:59:31 + '[' -n '' ']'
00:59:31 + hash -r
00:59:31 + '[' -n '' ']'
00:59:31 + unset VIRTUAL_ENV
00:59:31 + unset VIRTUAL_ENV_PROMPT
00:59:31 + '[' '!' '' = nondestructive ']'
00:59:31 + unset -f deactivate
00:59:31 + cd /home/omero/workspace/OMERO-training/openmicroscopy/examples/Training/java/src
00:59:31 + javac --release 11 -cp '.:/home/omero/workspace/OMERO-training/OMERO.server/lib/client/*' training/CreateImage.java training/DeleteData.java training/HowToUseTables.java training/LoadMetadataAdvanced.java training/RawDataAccess.java training/ReadDataAdvanced.java training/ReadData.java training/RenderImages.java training/ROIFolders.java training/ROIs.java training/Setup.java training/Sudo.java training/WriteData.java
00:59:33 Note: Some input files use unchecked or unsafe operations.
00:59:33 Note: Recompile with -Xlint:unchecked for details.
00:59:33 + java -cp '.:/home/omero/workspace/OMERO-training/OMERO.server/lib/client/*' training/Setup
00:59:37 omero.cmd.Delete2Response@5b057c8c
00:59:37 omero.cmd.Delete2Response@6b5894c8
00:59:37 one [class java.lang.String] 1.0 [class java.lang.Double]
00:59:37 two [class java.lang.String] 2.0 [class java.lang.Double]
00:59:37 three [class java.lang.String] 3.0 [class java.lang.Double]
00:59:37 -1.0
00:59:37 0
00:59:37 1
00:59:37 2
00:59:40 0 |]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]] 1514
00:59:40 1 |]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]] 1014
00:59:40 2 |]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]] 1014
00:59:40 3 |]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]] 1014
00:59:40 4 |]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]] 1014
00:59:40 5 |]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]] 1014
00:59:40 6 |]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]] 1014
00:59:40 7 |]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]] 1014
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00:59:40 Project:302 Project 0
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00:59:40 dataset:202 Dataset 1-2
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00:59:40 Project:451 Project 1
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00:59:40 Project:402 Project 0
00:59:40 Project:308 Project 0
00:59:40 Project:601 Project 1
00:59:40 dataset:601 Dataset 1-1
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00:59:40 dataset:618 new Name 2
00:59:40 dataset:607 New Dataset
00:59:40 dataset:602 Dataset 1-2
00:59:40 Project:602 Project 0
00:59:40 Project:2 Project 0
00:59:40 Project:151 Project 1
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00:59:40 dataset:151 Dataset 1-1
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00:59:40 dataset:157 New Dataset
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00:59:40 Project:202 Project 0
00:59:40 Project:51 Project 1
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00:59:40 dataset:57 New Dataset
00:59:40 dataset:52 Dataset 1-2
00:59:40 dataset:51 Dataset 1-1
00:59:40 Project:551 Project 1
00:59:40 dataset:557 New Dataset
00:59:40 dataset:567 new Name 1
00:59:40 dataset:552 Dataset 1-2
00:59:40 dataset:568 new Name 2
00:59:40 dataset:551 Dataset 1-1
00:59:40 Project:651 Project 1
00:59:40 dataset:651 Dataset 1-1
00:59:40 dataset:652 Dataset 1-2
00:59:40 dataset:657 New Dataset
00:59:40 Project:452 Project 0
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00:59:40 Project:307 Project 1
00:59:40 dataset:319 New Dataset
00:59:40 dataset:313 Dataset 1-1
00:59:40 dataset:314 Dataset 1-2
00:59:40 Project:152 Project 0
00:59:40 Project:313 Project 1
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00:59:40 dataset:325 Dataset 1-1
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00:59:40 dataset:326 Dataset 1-2
00:59:40 dataset:342 new Name 2
00:59:40 Project:501 Project 1
00:59:40 dataset:502 Dataset 1-2
00:59:40 dataset:517 new Name 1
00:59:40 dataset:507 New Dataset
00:59:40 dataset:518 new Name 2
00:59:40 dataset:501 Dataset 1-1
00:59:40 Project:8 Project 0
00:59:40 Project:52 Project 0
00:59:40 Project:552 Project 0
00:59:40 Project:7 Project 1
00:59:40 dataset:14 Dataset 1-2
00:59:40 dataset:19 New Dataset
00:59:40 dataset:29 new Name 1
00:59:40 dataset:30 new Name 2
00:59:40 dataset:13 Dataset 1-1
00:59:40 Project:1 Project 1
00:59:40 dataset:1 Dataset 1-1
00:59:40 dataset:7 New Dataset
00:59:40 dataset:2 Dataset 1-2
00:59:40 Project:301 Project 1
00:59:40 dataset:301 Dataset 1-1
00:59:40 dataset:302 Dataset 1-2
00:59:40 dataset:307 New Dataset
00:59:40 Project:352 Project 0
00:59:40 Project:101 Project 1
00:59:40 dataset:118 new Name 2
00:59:40 dataset:101 Dataset 1-1
00:59:40 dataset:117 new Name 1
00:59:40 dataset:107 New Dataset
00:59:40 dataset:102 Dataset 1-2
00:59:40 Project:351 Project 1
00:59:40 dataset:367 new Name 1
00:59:40 dataset:368 new Name 2
00:59:40 dataset:352 Dataset 1-2
00:59:40 dataset:351 Dataset 1-1
00:59:40 dataset:357 New Dataset
00:59:40 image:1162 New Image
00:59:40 image:1163 newImageFrom1153
00:59:40 image:1152 test.fake
00:59:40 5
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00:59:40 512
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00:59:40 screen:4 Screen
00:59:40 plate:6 Plate Name 0
00:59:40 plate:5 Plate
00:59:40 screen:351 Screen
00:59:40 plate:352 Plate Name 0
00:59:40 plate:351 Plate
00:59:40 screen:552 Screen
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00:59:40 plate:151 Plate
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00:59:40
00:59:40 List Datasets:
00:59:40 ID: 8 Name: MyDataset
00:59:40 ID: 9 Name: MyDataset
00:59:40 ID: 10 Name: MyDataset
00:59:40 ID: 20 Name: MyDataset
00:59:40 ID: 21 Name: MyDataset
00:59:40 ID: 22 Name: MyDataset
00:59:40 ID: 26 Name: MyDataset
00:59:40 ID: 27 Name: MyDataset
00:59:40 ID: 28 Name: MyDataset
00:59:40 ID: 58 Name: MyDataset
00:59:40
00:59:40 List Tags:
00:59:40 ID: 29 NS: omero.training.demo
00:59:40 ID: 30 NS: omero.training.demo
00:59:40 ID: 31 NS: omero.training.demo
00:59:40 ID: 66 NS: omero.training.demo
00:59:40 ID: 67 NS: omero.training.demo
00:59:40 ID: 68 NS: omero.training.demo
00:59:40 ID: 116 NS: omero.training.demo
00:59:40 ID: 117 NS: omero.training.demo
00:59:40 ID: 118 NS: omero.training.demo
00:59:40 ID: 166 NS: omero.training.demo
00:59:40 Dataset:561 New Dataset
00:59:40 Dataset:61 New Dataset
00:59:40 Dataset:612 New Dataset2
00:59:40 Dataset:663 FileAnnotationDelete
00:59:40 Dataset:453 Orphaned dataset 1
00:59:40 Dataset:454 Orphaned dataset 2
00:59:40 Dataset:463 FileAnnotationDelete
00:59:40 Dataset:410 MyDataset
00:59:40 Dataset:554 Orphaned dataset 2
00:59:40 Dataset:320 MyDataset
00:59:40 Dataset:334 MyDataset
00:59:40 Dataset:460 MyDataset
00:59:40 Dataset:362 New Dataset2
00:59:40 Project:1 Project 1
00:59:40 Dataset:309 MyDataset
00:59:40 Dataset:259 MyDataset
00:59:40 Dataset:412 New Dataset2
00:59:40 Dataset:116 MyDataset
00:59:40 Dataset:409 MyDataset
00:59:40 Dataset:160 MyDataset
00:59:40 Dataset:311 New Dataset
00:59:40 Dataset:408 MyDataset
00:59:40 Dataset:16 Orphaned dataset 2
00:59:40 Dataset:414 MyDataset
00:59:40 Dataset:54 Orphaned dataset 2
00:59:40 Dataset:210 MyDataset
00:59:40 Project:401 Project 1
00:59:40 Dataset:262 New Dataset2
00:59:40 Dataset:53 Orphaned dataset 1
00:59:40 Dataset:603 Orphaned dataset 1
00:59:40 Dataset:258 MyDataset
00:59:40 Dataset:503 Orphaned dataset 1
00:59:40 Dataset:654 Orphaned dataset 2
00:59:40 Dataset:359 MyDataset
00:59:40 Dataset:166 MyDataset
00:59:40 Dataset:338 MyDataset
00:59:40 Dataset:316 Orphaned dataset 2
00:59:40 Project:601 Project 1
00:59:40 Dataset:63 FileAnnotationDelete
00:59:40 Dataset:510 MyDataset
00:59:40 Project:101 Project 1
00:59:40 Dataset:560 MyDataset
00:59:40 Dataset:115 MyDataset
00:59:40 Dataset:11 New Dataset
00:59:40 Dataset:113 FileAnnotationDelete
00:59:40 Dataset:666 MyDataset
00:59:40 Project:651 Project 1
00:59:40 Dataset:315 Orphaned dataset 1
00:59:40 Dataset:511 New Dataset
00:59:40 Dataset:514 MyDataset
00:59:40 Dataset:333 MyDataset
00:59:40 Dataset:159 MyDataset
00:59:40 Dataset:614 MyDataset
00:59:40 Dataset:509 MyDataset
00:59:40 Dataset:339 MyDataset
00:59:40 Dataset:323 New Dataset
00:59:40 Dataset:610 MyDataset
00:59:40 Dataset:662 New Dataset2
00:59:40 Dataset:322 MyDataset
00:59:40 Dataset:562 New Dataset2
00:59:40 Dataset:308 MyDataset
00:59:40 Dataset:321 MyDataset
00:59:40 Dataset:211 New Dataset
00:59:40 Dataset:165 MyDataset
00:59:40 Project:307 Project 1
00:59:40 Dataset:615 MyDataset
00:59:40 Dataset:559 MyDataset
00:59:40 Dataset:162 New Dataset2
00:59:40 Dataset:58 MyDataset
00:59:40 Project:51 Project 1
00:59:40 Dataset:661 New Dataset
00:59:40 Dataset:459 MyDataset
00:59:40 Dataset:458 MyDataset
00:59:40 Dataset:208 MyDataset
00:59:40 Dataset:363 FileAnnotationDelete
00:59:40 Dataset:465 MyDataset
00:59:40 Dataset:337 FileAnnotationDelete
00:59:40 Project:251 Project 1
00:59:40 Dataset:328 Orphaned dataset 2
00:59:40 Project:201 Project 1
00:59:40 Dataset:563 FileAnnotationDelete
00:59:40 Dataset:416 MyDataset
00:59:40 Dataset:513 FileAnnotationDelete
00:59:40 Project:501 Project 1
00:59:40 Dataset:9 MyDataset
00:59:40 Project:351 Project 1
00:59:40 Dataset:659 MyDataset
00:59:40 Dataset:26 MyDataset
00:59:40 Dataset:461 New Dataset
00:59:40 Dataset:609 MyDataset
00:59:40 Dataset:653 Orphaned dataset 1
00:59:40 Dataset:665 MyDataset
00:59:40 Dataset:27 MyDataset
00:59:40 Dataset:462 New Dataset2
00:59:40 Dataset:108 MyDataset
00:59:40 Project:301 Project 1
00:59:40 Project:451 Project 1
00:59:40 Dataset:12 New Dataset2
00:59:40 Dataset:566 MyDataset
00:59:40 Dataset:66 MyDataset
00:59:40 Dataset:24 New Dataset2
00:59:40 Project:151 Project 1
00:59:40 Dataset:466 MyDataset
00:59:40 Dataset:504 Orphaned dataset 2
00:59:40 Dataset:260 MyDataset
00:59:40 Dataset:65 MyDataset
00:59:40 Dataset:312 New Dataset2
00:59:40 Dataset:158 MyDataset
00:59:40 Dataset:365 MyDataset
00:59:40 Dataset:366 MyDataset
00:59:40 Project:313 Project 1
00:59:40 Dataset:110 MyDataset
00:59:40 Dataset:413 FileAnnotationDelete
00:59:40 Dataset:464 MyDataset
00:59:40 Dataset:4 Orphaned dataset 2
00:59:40 Dataset:353 Orphaned dataset 1
00:59:40 Dataset:254 Orphaned dataset 2
00:59:40 Dataset:324 New Dataset2
00:59:40 Dataset:261 New Dataset
00:59:40 Dataset:15 Orphaned dataset 1
00:59:40 Dataset:336 New Dataset2
00:59:40 Dataset:209 MyDataset
00:59:40 Dataset:512 New Dataset2
00:59:40 Dataset:404 Orphaned dataset 2
00:59:40 Dataset:664 MyDataset
00:59:40 Dataset:59 MyDataset
00:59:40 Dataset:660 MyDataset
00:59:40 Dataset:212 New Dataset2
00:59:40 Dataset:604 Orphaned dataset 2
00:59:40 Dataset:60 MyDataset
00:59:40 Dataset:20 MyDataset
00:59:40 Dataset:558 MyDataset
00:59:40 Dataset:611 New Dataset
00:59:40 Dataset:204 Orphaned dataset 2
00:59:40 Dataset:332 MyDataset
00:59:40 Dataset:154 Orphaned dataset 2
00:59:40 Dataset:508 MyDataset
00:59:40 Dataset:411 New Dataset
00:59:40 Project:7 Project 1
00:59:40 Dataset:104 Orphaned dataset 2
00:59:40 Dataset:28 MyDataset
00:59:40 Dataset:21 MyDataset
00:59:40 Dataset:3 Orphaned dataset 1
00:59:40 Dataset:253 Orphaned dataset 1
00:59:40 Dataset:403 Orphaned dataset 1
00:59:40 Dataset:303 Orphaned dataset 1
00:59:40 Dataset:361 New Dataset
00:59:40 Dataset:203 Orphaned dataset 1
00:59:40 Dataset:613 FileAnnotationDelete
00:59:40 Dataset:10 MyDataset
00:59:40 Dataset:335 New Dataset
00:59:40 Dataset:22 MyDataset
00:59:40 Dataset:360 MyDataset
00:59:40 Dataset:23 New Dataset
00:59:40 Dataset:327 Orphaned dataset 1
00:59:40 Dataset:364 MyDataset
00:59:40 Dataset:164 MyDataset
00:59:40 Project:551 Project 1
00:59:40 Dataset:304 Orphaned dataset 2
00:59:40 Dataset:415 MyDataset
00:59:40 Dataset:25 FileAnnotationDelete
00:59:40 Dataset:564 MyDataset
00:59:40 Dataset:112 New Dataset2
00:59:40 Dataset:515 MyDataset
00:59:40 Dataset:616 MyDataset
00:59:40 Dataset:103 Orphaned dataset 1
00:59:40 Dataset:310 MyDataset
00:59:40 Dataset:111 New Dataset
00:59:40 Dataset:64 MyDataset
00:59:40 Dataset:161 New Dataset
00:59:40 Dataset:62 New Dataset2
00:59:40 Dataset:516 MyDataset
00:59:40 Dataset:8 MyDataset
00:59:40 Dataset:553 Orphaned dataset 1
00:59:40 Dataset:153 Orphaned dataset 1
00:59:40 Dataset:114 MyDataset
00:59:40 Dataset:358 MyDataset
00:59:40 Dataset:658 MyDataset
00:59:40 Dataset:565 MyDataset
00:59:40 Dataset:354 Orphaned dataset 2
00:59:40 Dataset:109 MyDataset
00:59:40 Dataset:340 MyDataset
00:59:40 Dataset:608 MyDataset
00:59:40 Dataset:163 FileAnnotationDelete
00:59:40 Size:0
00:59:41 512 512
00:59:41 9
00:59:41 9
00:59:41 1
00:59:42 Logged in as ladmin_user
00:59:42 Added 'training_user's tag' to dataset MyDataset on behalf of training_user
00:59:42 Added 'ladmin_user's tag' to dataset MyDataset as admin.
00:59:42 Finished: SUCCESS
