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02:25:11 inflating: OMERO.server-5.6.3-637-4868227d9f-ice36-b22/sql/psql/OMERO5.4__0/views.sql
02:25:11 + rm -f OMERO.server-5.6.3-637-4868227d9f-ice36-b22.zip
02:25:11 + mv /home/omero/workspace/OMERO-training/OMERO.server-5.6.3-637-4868227d9f-ice36-b22 /home/omero/workspace/OMERO-training/OMERO.server
02:25:11 + source /home/omero/workspace/OMERO-training/.venv3/bin/activate
02:25:11 ++ deactivate nondestructive
02:25:11 ++ '[' -n '' ']'
02:25:11 ++ '[' -n '' ']'
02:25:11 ++ hash -r
02:25:11 ++ '[' -n '' ']'
02:25:11 ++ unset VIRTUAL_ENV
02:25:11 ++ unset VIRTUAL_ENV_PROMPT
02:25:11 ++ '[' '!' nondestructive = nondestructive ']'
02:25:11 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-training/.venv3
02:25:11 ++ export VIRTUAL_ENV
02:25:11 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
02:25:11 ++ PATH=/home/omero/workspace/OMERO-training/.venv3/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
02:25:11 ++ export PATH
02:25:11 ++ '[' -n '' ']'
02:25:11 ++ '[' -z '' ']'
02:25:11 ++ _OLD_VIRTUAL_PS1=
02:25:11 ++ PS1='(.venv3) '
02:25:11 ++ export PS1
02:25:11 ++ VIRTUAL_ENV_PROMPT='(.venv3) '
02:25:11 ++ export VIRTUAL_ENV_PROMPT
02:25:11 ++ hash -r
02:25:11 + for x in *.gz
02:25:11 + pip install omero_dropbox-5.7.1.dev0.tar.gz
02:25:12 Processing ./omero_dropbox-5.7.1.dev0.tar.gz
02:25:12 Installing build dependencies: started
02:25:13 Installing build dependencies: finished with status 'done'
02:25:13 Getting requirements to build wheel: started
02:25:14 Getting requirements to build wheel: finished with status 'done'
02:25:14 Preparing metadata (pyproject.toml): started
02:25:14 Preparing metadata (pyproject.toml): finished with status 'done'
02:25:14 Collecting omero-py (from omero-dropbox==5.7.1.dev0)
02:25:14 Using cached omero_py-5.22.1-py3-none-any.whl.metadata (6.5 kB)
02:25:14 Collecting appdirs (from omero-py->omero-dropbox==5.7.1.dev0)
02:25:14 Using cached appdirs-1.4.4-py2.py3-none-any.whl.metadata (9.0 kB)
02:25:14 Collecting future (from omero-py->omero-dropbox==5.7.1.dev0)
02:25:14 Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
02:25:14 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (2.4.6)
02:25:14 Collecting Pillow>=10.0.0 (from omero-py->omero-dropbox==5.7.1.dev0)
02:25:14 Using cached pillow-12.3.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl.metadata (9.1 kB)
02:25:15 Collecting PyYAML (from omero-py->omero-dropbox==5.7.1.dev0)
02:25:15 Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB)
02:25:15 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py->omero-dropbox==5.7.1.dev0) (3.6.5)
02:25:15 Collecting requests (from omero-py->omero-dropbox==5.7.1.dev0)
02:25:15 Using cached requests-2.34.2-py3-none-any.whl.metadata (4.8 kB)
02:25:15 Collecting portalocker (from omero-py->omero-dropbox==5.7.1.dev0)
02:25:15 Using cached portalocker-3.2.0-py3-none-any.whl.metadata (8.7 kB)
02:25:15 Collecting charset_normalizer<4,>=2 (from requests->omero-py->omero-dropbox==5.7.1.dev0)
02:25:15 Using cached charset_normalizer-3.4.9-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (41 kB)
02:25:15 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (3.18)
02:25:15 Collecting urllib3<3,>=1.26 (from requests->omero-py->omero-dropbox==5.7.1.dev0)
02:25:15 Using cached urllib3-2.7.0-py3-none-any.whl.metadata (6.9 kB)
02:25:15 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py->omero-dropbox==5.7.1.dev0) (2026.7.22)
02:25:15 Using cached omero_py-5.22.1-py3-none-any.whl (2.8 MB)
02:25:15 Using cached pillow-12.3.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (6.9 MB)
02:25:15 Using cached appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB)
02:25:15 Using cached future-1.0.0-py3-none-any.whl (491 kB)
02:25:15 Using cached portalocker-3.2.0-py3-none-any.whl (22 kB)
02:25:15 Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB)
02:25:15 Using cached requests-2.34.2-py3-none-any.whl (73 kB)
02:25:15 Using cached charset_normalizer-3.4.9-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (221 kB)
02:25:15 Using cached urllib3-2.7.0-py3-none-any.whl (131 kB)
02:25:15 Building wheels for collected packages: omero-dropbox
02:25:15 Building wheel for omero-dropbox (pyproject.toml): started
02:25:15 Building wheel for omero-dropbox (pyproject.toml): finished with status 'done'
02:25:15 Created wheel for omero-dropbox: filename=omero_dropbox-5.7.1.dev0-py3-none-any.whl size=49153 sha256=ec6972b06fe4ae6f80793b5faae5eb528616300eedba4f27bf994cb7254f4df1
02:25:15 Stored in directory: /home/omero/.cache/pip/wheels/27/2f/e4/2a907ecffe4660d4c840758e6c0660e7ef9d3bb50ad634b559
02:25:15 Successfully built omero-dropbox
02:25:16 Installing collected packages: appdirs, urllib3, PyYAML, portalocker, Pillow, future, charset_normalizer, requests, omero-py, omero-dropbox
02:25:44
02:25:44 Successfully installed Pillow-12.3.0 PyYAML-6.0.3 appdirs-1.4.4 charset_normalizer-3.4.9 future-1.0.0 omero-dropbox-5.7.1.dev0 omero-py-5.22.1 portalocker-3.2.0 requests-2.34.2 urllib3-2.7.0
02:25:44 + for x in *.gz
02:25:44 + pip install omero_marshal-0.9.2.dev0.tar.gz
02:25:45 Processing ./omero_marshal-0.9.2.dev0.tar.gz
02:25:45 Installing build dependencies: started
02:25:47 Installing build dependencies: finished with status 'done'
02:25:47 Getting requirements to build wheel: started
02:25:47 Getting requirements to build wheel: finished with status 'done'
02:25:47 Preparing metadata (pyproject.toml): started
02:25:48 Preparing metadata (pyproject.toml): finished with status 'done'
02:25:48 Building wheels for collected packages: omero_marshal
02:25:48 Building wheel for omero_marshal (pyproject.toml): started
02:25:48 Building wheel for omero_marshal (pyproject.toml): finished with status 'done'
02:25:48 Created wheel for omero_marshal: filename=omero_marshal-0.9.2.dev0-py3-none-any.whl size=88129 sha256=582b51e38a902c06fd4802cacdeaa8c95007ee9b2fe5f11d98f0674f6ed75eaf
02:25:48 Stored in directory: /home/omero/.cache/pip/wheels/a7/49/f8/ee97ae6cd0ac1217d15421daf522887b20ca2595964479e97a
02:25:48 Successfully built omero_marshal
02:25:48 Installing collected packages: omero_marshal
02:25:51 Successfully installed omero_marshal-0.9.2.dev0
02:25:51 + for x in *.gz
02:25:51 + pip install omero_py-5.22.2.dev0.tar.gz
02:25:52 Processing ./omero_py-5.22.2.dev0.tar.gz
02:25:52 Installing build dependencies: started
02:25:54 Installing build dependencies: finished with status 'done'
02:25:54 Getting requirements to build wheel: started
02:25:55 Getting requirements to build wheel: finished with status 'done'
02:25:55 Preparing metadata (pyproject.toml): started
02:25:55 Preparing metadata (pyproject.toml): finished with status 'done'
02:25:55 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (1.4.4)
02:25:55 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (1.0.0)
02:25:55 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (2.4.6)
02:25:55 Requirement already satisfied: Pillow>=10.0.0 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (12.3.0)
02:25:55 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (6.0.3)
02:25:55 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (3.6.5)
02:25:55 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (2.34.2)
02:25:55 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-py==5.22.2.dev0) (3.2.0)
02:25:55 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.2.dev0) (3.4.9)
02:25:55 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.2.dev0) (3.18)
02:25:55 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.2.dev0) (2.7.0)
02:25:55 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py==5.22.2.dev0) (2026.7.22)
02:25:55 Building wheels for collected packages: omero-py
02:25:55 Building wheel for omero-py (pyproject.toml): started
02:25:56 Building wheel for omero-py (pyproject.toml): finished with status 'done'
02:25:56 Created wheel for omero-py: filename=omero_py-5.22.2.dev0-py3-none-any.whl size=2787060 sha256=6f376333cec60fe3e4e87d5a4d6be0ef89a27e567209f52a7c3eea1c8d2e7706
02:25:56 Stored in directory: /home/omero/.cache/pip/wheels/67/6d/a0/54908d8e3aee8366415fea8426f418a6717addeb1669d2e673
02:25:56 Successfully built omero-py
02:25:56 Installing collected packages: omero-py
02:25:56 Attempting uninstall: omero-py
02:25:56 Found existing installation: omero-py 5.22.1
02:25:57 Uninstalling omero-py-5.22.1:
02:26:04 Successfully uninstalled omero-py-5.22.1
02:26:20 Successfully installed omero-py-5.22.2.dev0
02:26:20 + for x in *.gz
02:26:20 + pip install omero_scripts-5.10.1.dev0.tar.gz
02:26:21 Processing ./omero_scripts-5.10.1.dev0.tar.gz
02:26:21 Installing build dependencies: started
02:26:23 Installing build dependencies: finished with status 'done'
02:26:23 Getting requirements to build wheel: started
02:26:23 Getting requirements to build wheel: finished with status 'done'
02:26:23 Preparing metadata (pyproject.toml): started
02:26:23 Preparing metadata (pyproject.toml): finished with status 'done'
02:26:23 Building wheels for collected packages: omero-scripts
02:26:23 Building wheel for omero-scripts (pyproject.toml): started
02:26:24 Building wheel for omero-scripts (pyproject.toml): finished with status 'done'
02:26:24 Created wheel for omero-scripts: filename=omero_scripts-5.10.1.dev0-py3-none-any.whl size=137216 sha256=208da19491e25163b71f00affc78880333d18ae743b916aeea7d6c802a2d63ac
02:26:24 Stored in directory: /home/omero/.cache/pip/wheels/88/2f/31/9478f1cef9d86ee7a706f3c8d94d67d22081ff846c64d43aa0
02:26:24 Successfully built omero-scripts
02:26:24 Installing collected packages: omero-scripts
02:26:25 Successfully installed omero-scripts-5.10.1.dev0
02:26:25 + for x in *.gz
02:26:25 + pip install omero_web-5.32.1.dev0.tar.gz
02:26:26 Processing ./omero_web-5.32.1.dev0.tar.gz
02:26:26 Installing build dependencies: started
02:26:27 Installing build dependencies: finished with status 'done'
02:26:27 Getting requirements to build wheel: started
02:26:28 Getting requirements to build wheel: finished with status 'done'
02:26:28 Preparing metadata (pyproject.toml): started
02:26:28 Preparing metadata (pyproject.toml): finished with status 'done'
02:26:28 Requirement already satisfied: omero-py>=5.19.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.32.1.dev0) (5.22.2.dev0)
02:26:28 Collecting concurrent-log-handler>=0.9.20 (from omero-web==5.32.1.dev0)
02:26:28 Using cached concurrent_log_handler-0.9.29-py3-none-any.whl.metadata (27 kB)
02:26:28 Collecting Django<5.3,>=5.2.9 (from omero-web==5.32.1.dev0)
02:26:28 Using cached django-5.2.16-py3-none-any.whl.metadata (4.1 kB)
02:26:29 Collecting django-pipeline>=4.1.0 (from omero-web==5.32.1.dev0)
02:26:29 Using cached django_pipeline-4.1.0-py3-none-any.whl.metadata (5.9 kB)
02:26:29 Collecting django-cors-headers==3.7.0 (from omero-web==5.32.1.dev0)
02:26:29 Using cached django_cors_headers-3.7.0-py3-none-any.whl.metadata (15 kB)
02:26:29 Collecting whitenoise>=5.3.0 (from omero-web==5.32.1.dev0)
02:26:29 Using cached whitenoise-6.12.0-py3-none-any.whl.metadata (3.7 kB)
02:26:29 Collecting gunicorn>=19.3 (from omero-web==5.32.1.dev0)
02:26:29 Using cached gunicorn-26.0.0-py3-none-any.whl.metadata (5.4 kB)
02:26:29 Requirement already satisfied: omero-marshal>=0.7.0 in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.32.1.dev0) (0.9.2.dev0)
02:26:29 Requirement already satisfied: Pillow in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.32.1.dev0) (12.3.0)
02:26:29 Collecting pytz (from omero-web==5.32.1.dev0)
02:26:29 Using cached pytz-2026.3.post1-py2.py3-none-any.whl.metadata (22 kB)
02:26:29 Requirement already satisfied: portalocker in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.32.1.dev0) (3.2.0)
02:26:29 Requirement already satisfied: packaging in ./.venv3/lib64/python3.11/site-packages (from omero-web==5.32.1.dev0) (26.2)
02:26:29 Collecting importlib-resources (from omero-web==5.32.1.dev0)
02:26:29 Using cached importlib_resources-7.1.0-py3-none-any.whl.metadata (4.0 kB)
02:26:29 Collecting asgiref>=3.8.1 (from Django<5.3,>=5.2.9->omero-web==5.32.1.dev0)
02:26:29 Using cached asgiref-3.12.1-py3-none-any.whl.metadata (9.4 kB)
02:26:29 Collecting sqlparse>=0.3.1 (from Django<5.3,>=5.2.9->omero-web==5.32.1.dev0)
02:26:29 Using cached sqlparse-0.5.5-py3-none-any.whl.metadata (4.7 kB)
02:26:29 Requirement already satisfied: setuptools in ./.venv3/lib64/python3.11/site-packages (from django-pipeline>=4.1.0->omero-web==5.32.1.dev0) (83.0.0)
02:26:29 Collecting wheel (from django-pipeline>=4.1.0->omero-web==5.32.1.dev0)
02:26:29 Using cached wheel-0.47.0-py3-none-any.whl.metadata (2.3 kB)
02:26:29 Requirement already satisfied: appdirs in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.32.1.dev0) (1.4.4)
02:26:29 Requirement already satisfied: future in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.32.1.dev0) (1.0.0)
02:26:29 Requirement already satisfied: numpy<3,>=2 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.32.1.dev0) (2.4.6)
02:26:29 Requirement already satisfied: PyYAML in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.32.1.dev0) (6.0.3)
02:26:29 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.32.1.dev0) (3.6.5)
02:26:29 Requirement already satisfied: requests in ./.venv3/lib64/python3.11/site-packages (from omero-py>=5.19.0->omero-web==5.32.1.dev0) (2.34.2)
02:26:29 Requirement already satisfied: charset_normalizer<4,>=2 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.32.1.dev0) (3.4.9)
02:26:29 Requirement already satisfied: idna<4,>=2.5 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.32.1.dev0) (3.18)
02:26:29 Requirement already satisfied: urllib3<3,>=1.26 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.32.1.dev0) (2.7.0)
02:26:29 Requirement already satisfied: certifi>=2023.5.7 in ./.venv3/lib64/python3.11/site-packages (from requests->omero-py>=5.19.0->omero-web==5.32.1.dev0) (2026.7.22)
02:26:29 Using cached django_cors_headers-3.7.0-py3-none-any.whl (12 kB)
02:26:29 Using cached django-5.2.16-py3-none-any.whl (8.3 MB)
02:26:29 Using cached asgiref-3.12.1-py3-none-any.whl (25 kB)
02:26:29 Using cached concurrent_log_handler-0.9.29-py3-none-any.whl (32 kB)
02:26:29 Using cached django_pipeline-4.1.0-py3-none-any.whl (75 kB)
02:26:29 Using cached gunicorn-26.0.0-py3-none-any.whl (212 kB)
02:26:29 Using cached sqlparse-0.5.5-py3-none-any.whl (46 kB)
02:26:29 Using cached whitenoise-6.12.0-py3-none-any.whl (20 kB)
02:26:29 Using cached importlib_resources-7.1.0-py3-none-any.whl (37 kB)
02:26:29 Using cached pytz-2026.3.post1-py2.py3-none-any.whl (508 kB)
02:26:29 Using cached wheel-0.47.0-py3-none-any.whl (32 kB)
02:26:29 Building wheels for collected packages: omero-web
02:26:29 Building wheel for omero-web (pyproject.toml): started
02:26:31 Building wheel for omero-web (pyproject.toml): finished with status 'done'
02:26:31 Created wheel for omero-web: filename=omero_web-5.32.1.dev0-py3-none-any.whl size=2820645 sha256=76cf0d1115b64c4711d1a0053935dd763cae2f7fbe8146438d6fe484bfe98b56
02:26:31 Stored in directory: /home/omero/.cache/pip/wheels/91/ad/79/ec318377d2e814ec25bf29bc612d81f9a885cbc4aa52a338d5
02:26:31 Successfully built omero-web
02:26:31 Installing collected packages: pytz, whitenoise, wheel, sqlparse, importlib-resources, gunicorn, concurrent-log-handler, asgiref, django-pipeline, Django, django-cors-headers, omero-web
02:27:39
02:27:39 Successfully installed Django-5.2.16 asgiref-3.12.1 concurrent-log-handler-0.9.29 django-cors-headers-3.7.0 django-pipeline-4.1.0 gunicorn-26.0.0 importlib-resources-7.1.0 omero-web-5.32.1.dev0 pytz-2026.3.post1 sqlparse-0.5.5 wheel-0.47.0 whitenoise-6.12.0
02:27:40 + cd /home/omero/workspace/OMERO-training/OMERO.server
02:27:40 + bash /home/omero/workspace/OMERO-training/openmicroscopy/examples/Training/training_setup.sh
02:27:40 + HOSTNAME=0bcb327dc185
02:27:40 + PORT=4064
02:27:40 + WEBHOST=http://nginx/web
02:27:40 + SERVER_NAME=omero
02:27:40 + ROOT_PASSWORD=omero
02:27:40 + GROUP_NAME=training_group
02:27:40 + GROUP_NAME_2=training_group-2
02:27:40 + USER_NAME=training_user
02:27:40 + USER_NAME_2=training_user-2
02:27:40 + LIGHTADMIN_USER_NAME=ladmin_user
02:27:40 + USER_PASSWORD=ome
02:27:40 + CONFIG_FILENAME=training_ice.config
02:27:40 + omero login root@0bcb327dc185:4064 -w omero
02:27:42 Created session for root@0bcb327dc185:4064. Idle timeout: 10 min. Current group: system
02:27:43 + omero group add training_group --type read-only --ignore-existing
02:27:44 Using session for root@0bcb327dc185:4064. Idle timeout: 10 min. Current group: system
02:27:44 Group exists: training_group (id=3)
02:27:44 + omero group add training_group-2 --type read-only --ignore-existing
02:27:46 Using session for root@0bcb327dc185:4064. Idle timeout: 10 min. Current group: system
02:27:46 Group exists: training_group-2 (id=4)
02:27:46 + omero user add training_user training_user training_user training_group training_group-2 --ignore-existing -P ome
02:27:48 Using session for root@0bcb327dc185:4064. Idle timeout: 10 min. Current group: system
02:27:48 User exists: training_user (id=2)
02:27:49 + omero user joingroup --name training_user --group-name training_group training_group-2
02:27:51 Using session for root@0bcb327dc185:4064. Idle timeout: 10 min. Current group: system
02:27:51 2 is already in group 3
02:27:51 2 is already in group 4
02:27:51 + omero user add training_user-2 training_user-2 training_user-2 training_group training_group-2 --ignore-existing -P ome
02:27:53 Using session for root@0bcb327dc185:4064. Idle timeout: 10 min. Current group: system
02:27:53 User exists: training_user-2 (id=3)
02:27:53 + omero user joingroup --name training_user-2 --group-name training_group training_group-2
02:27:55 Using session for root@0bcb327dc185:4064. Idle timeout: 10 min. Current group: system
02:27:55 3 is already in group 3
02:27:55 3 is already in group 4
02:27:55 + omero user add ladmin_user ladmin_user ladmin_user training_group training_group-2 -a --ignore-existing -P ome
02:27:58 Using session for root@0bcb327dc185:4064. Idle timeout: 10 min. Current group: system
02:27:58 User exists: ladmin_user (id=4)
02:27:58 + omero user joingroup --name ladmin_user --group-name training_group training_group-2
02:28:00 Using session for root@0bcb327dc185:4064. Idle timeout: 10 min. Current group: system
02:28:00 4 is already in group 3
02:28:00 4 is already in group 4
02:28:00 ++ omero user info ladmin_user --style plain
02:28:00 ++ cut -d, -f1
02:28:02 Using session for root@0bcb327dc185:4064. Idle timeout: 10 min. Current group: system
02:28:02 + id=4
02:28:02 + omero obj map-set Experimenter:4 config AdminPrivilege:Sudo true
02:28:06 Using session for root@0bcb327dc185:4064. Idle timeout: 10 min. Current group: system
02:28:06 Experimenter:4
02:28:06 + omero logout
02:28:09 + touch test.fake
02:28:09 + omero login training_user@0bcb327dc185:4064 -w ome -g training_group
02:28:10 Created session for training_user@0bcb327dc185:4064. Idle timeout: 10 min. Current group: training_group
02:28:11 + nProjects=1
02:28:11 + nDatasets=2
02:28:11 + echo 'Creating projects and datasets'
02:28:11 Creating projects and datasets
02:28:11 + (( i=1 ))
02:28:11 + (( i<=1 ))
02:28:11 ++ omero obj new Project 'name=Project 1'
02:28:12 Using session for training_user@0bcb327dc185:4064. Idle timeout: 10 min. Current group: training_group
02:28:12 + project=Project:751
02:28:12 + (( j=1 ))
02:28:12 + (( j<=2 ))
02:28:12 ++ omero obj new Dataset 'name=Dataset 1-1'
02:28:14 Using session for training_user@0bcb327dc185:4064. Idle timeout: 10 min. Current group: training_group
02:28:15 + dataset=Dataset:751
02:28:15 + omero obj new ProjectDatasetLink parent=Project:751 child=Dataset:751
02:28:17 Using session for training_user@0bcb327dc185:4064. Idle timeout: 10 min. Current group: training_group
02:28:17 ProjectDatasetLink:751
02:28:17 + echo 'Importing image into dataset'
02:28:17 Importing image into dataset
02:28:17 + omero import -d Dataset:751 test.fake --debug ERROR
02:28:20 Using session for training_user@0bcb327dc185:4064. Idle timeout: 10 min. Current group: training_group
02:28:21 2026-07-27 02:28:21,564 307 [ main] INFO ome.formats.importer.ImportConfig - OMERO.blitz Version: 5.8.6-SNAPSHOT
02:28:21 2026-07-27 02:28:21,587 330 [ main] INFO ome.formats.importer.ImportConfig - Bioformats version: 8.5.0 revision: 877c317e4e396381dc76e56c1539b24947f71dce date: 18 March 2026
02:28:27 Image:1251
02:28:27 Other imported objects:
02:28:27 Fileset:851
02:28:27
02:28:27 ==> Summary
02:28:27 1 file uploaded, 1 fileset created, 1 image imported, 0 errors in 0:00:03.803
02:28:27 + (( j++ ))
02:28:27 + (( j<=2 ))
02:28:27 ++ omero obj new Dataset 'name=Dataset 1-2'
02:28:29 Using session for training_user@0bcb327dc185:4064. Idle timeout: 10 min. Current group: training_group
02:28:29 + dataset=Dataset:752
02:28:29 + omero obj new ProjectDatasetLink parent=Project:751 child=Dataset:752
02:28:31 Using session for training_user@0bcb327dc185:4064. Idle timeout: 10 min. Current group: training_group
02:28:31 ProjectDatasetLink:752
02:28:31 + echo 'Importing image into dataset'
02:28:31 Importing image into dataset
02:28:31 + omero import -d Dataset:752 test.fake --debug ERROR
02:28:33 Using session for training_user@0bcb327dc185:4064. Idle timeout: 10 min. Current group: training_group
02:28:34 2026-07-27 02:28:34,277 220 [ main] INFO ome.formats.importer.ImportConfig - OMERO.blitz Version: 5.8.6-SNAPSHOT
02:28:34 2026-07-27 02:28:34,290 233 [ main] INFO ome.formats.importer.ImportConfig - Bioformats version: 8.5.0 revision: 877c317e4e396381dc76e56c1539b24947f71dce date: 18 March 2026
02:28:37 Image:1252
02:28:37 Other imported objects:
02:28:37 Fileset:852
02:28:37
02:28:37 ==> Summary
02:28:37 1 file uploaded, 1 fileset created, 1 image imported, 0 errors in 0:00:01.814
02:28:37 + (( j++ ))
02:28:37 + (( j<=2 ))
02:28:37 + (( i++ ))
02:28:37 + (( i<=1 ))
02:28:37 + (( j=1 ))
02:28:37 + (( j<=2 ))
02:28:37 + omero obj new Dataset 'name=Orphaned dataset 1'
02:28:39 Using session for training_user@0bcb327dc185:4064. Idle timeout: 10 min. Current group: training_group
02:28:39 Dataset:753
02:28:40 + (( j++ ))
02:28:40 + (( j<=2 ))
02:28:40 + omero obj new Dataset 'name=Orphaned dataset 2'
02:28:42 Using session for training_user@0bcb327dc185:4064. Idle timeout: 10 min. Current group: training_group
02:28:42 Dataset:754
02:28:42 + (( j++ ))
02:28:42 + (( j<=2 ))
02:28:42 + echo 'Importing image file'
02:28:42 Importing image file
02:28:42 + touch 'test&sizeT=10&sizeZ=5&sizeC=3.fake'
02:28:42 + omero import 'test&sizeT=10&sizeZ=5&sizeC=3.fake'
02:28:49 ++ sed -n -e 's/^Image://p' image_import.log
02:28:49 + imageid=1253
02:28:49 ++ omero obj new MapAnnotation
02:28:51 Using session for training_user@0bcb327dc185:4064. Idle timeout: 10 min. Current group: training_group
02:28:51 + MAP=MapAnnotation:3251
02:28:51 + omero obj map-set MapAnnotation:3251 mapValue testkey testvalue
02:28:54 Using session for training_user@0bcb327dc185:4064. Idle timeout: 10 min. Current group: training_group
02:28:54 MapAnnotation:3251
02:28:54 + omero obj new ImageAnnotationLink parent=Image:1253 child=MapAnnotation:3251
02:28:57 Using session for training_user@0bcb327dc185:4064. Idle timeout: 10 min. Current group: training_group
02:28:57 ImageAnnotationLink:3201
02:28:57 ++ omero obj new Screen name=Screen
02:28:59 Using session for training_user@0bcb327dc185:4064. Idle timeout: 10 min. Current group: training_group
02:28:59 + screen=Screen:751
02:28:59 ++ omero obj new Plate name=Plate
02:29:02 Using session for training_user@0bcb327dc185:4064. Idle timeout: 10 min. Current group: training_group
02:29:02 + plate=Plate:751
02:29:02 + omero obj new ScreenPlateLink parent=Screen:751 child=Plate:751
02:29:04 Using session for training_user@0bcb327dc185:4064. Idle timeout: 10 min. Current group: training_group
02:29:04 ScreenPlateLink:751
02:29:05 + echo 'Importing SPW file'
02:29:05 Importing SPW file
02:29:05 + touch 'SPW&plates=1&plateRows=1&plateCols=3&fields=1&plateAcqs=1.fake'
02:29:05 + omero import -r Screen:751 'SPW&plates=1&plateRows=1&plateCols=3&fields=1&plateAcqs=1.fake'
02:29:14 ++ sed -n -e 's/^Plate://p' plate_import.log
02:29:14 + plateid=752
02:29:14 + omero logout
02:29:17 + omero login training_user-2@0bcb327dc185:4064 -w ome -g training_group
02:29:19 Created session for training_user-2@0bcb327dc185:4064. Idle timeout: 10 min. Current group: training_group
02:29:19 + omero obj new Project 'name=Project 0'
02:29:21 Using session for training_user-2@0bcb327dc185:4064. Idle timeout: 10 min. Current group: training_group
02:29:21 Project:752
02:29:21 + omero obj new Dataset 'name=Dataset 0'
02:29:23 Using session for training_user-2@0bcb327dc185:4064. Idle timeout: 10 min. Current group: training_group
02:29:23 Dataset:755
02:29:23 + omero import test.fake --debug ERROR
02:29:25 Using session for training_user-2@0bcb327dc185:4064. Idle timeout: 10 min. Current group: training_group
02:29:26 2026-07-27 02:29:26,553 216 [ main] INFO ome.formats.importer.ImportConfig - OMERO.blitz Version: 5.8.6-SNAPSHOT
02:29:26 2026-07-27 02:29:26,566 229 [ main] INFO ome.formats.importer.ImportConfig - Bioformats version: 8.5.0 revision: 877c317e4e396381dc76e56c1539b24947f71dce date: 18 March 2026
02:29:29 Image:1257
02:29:29 Other imported objects:
02:29:29 Fileset:855
02:29:29
02:29:29 ==> Summary
02:29:29 1 file uploaded, 1 fileset created, 1 image imported, 0 errors in 0:00:01.306
02:29:29 + omero obj new Screen name=Screen
02:29:31 Using session for training_user-2@0bcb327dc185:4064. Idle timeout: 10 min. Current group: training_group
02:29:31 Screen:752
02:29:31 + omero obj new Plate name=Plate
02:29:33 Using session for training_user-2@0bcb327dc185:4064. Idle timeout: 10 min. Current group: training_group
02:29:33 Plate:753
02:29:33 + omero login training_user@0bcb327dc185:4064 -w ome -g training_group-2
02:29:35 Created session for training_user@0bcb327dc185:4064. Idle timeout: 10 min. Current group: training_group-2
02:29:35 + omero obj new Project 'name=Project 0'
02:29:37 Using session for training_user@0bcb327dc185:4064. Idle timeout: 10 min. Current group: training_group-2
02:29:37 Project:753
02:29:37 + omero obj new Dataset 'name=Dataset 0'
02:29:39 Using session for training_user@0bcb327dc185:4064. Idle timeout: 10 min. Current group: training_group-2
02:29:39 Dataset:756
02:29:39 + omero import test.fake --debug ERROR
02:29:41 Using session for training_user@0bcb327dc185:4064. Idle timeout: 10 min. Current group: training_group-2
02:29:42 2026-07-27 02:29:42,288 219 [ main] INFO ome.formats.importer.ImportConfig - OMERO.blitz Version: 5.8.6-SNAPSHOT
02:29:42 2026-07-27 02:29:42,301 232 [ main] INFO ome.formats.importer.ImportConfig - Bioformats version: 8.5.0 revision: 877c317e4e396381dc76e56c1539b24947f71dce date: 18 March 2026
02:29:44 Image:1258
02:29:44 Other imported objects:
02:29:44 Fileset:856
02:29:44
02:29:44 ==> Summary
02:29:44 1 file uploaded, 1 fileset created, 1 image imported, 0 errors in 0:00:01.239
02:29:45 + omero obj new Screen name=Screen
02:29:46 Using session for training_user@0bcb327dc185:4064. Idle timeout: 10 min. Current group: training_group-2
02:29:46 Screen:753
02:29:47 + omero obj new Plate name=Plate
02:29:49 Using session for training_user@0bcb327dc185:4064. Idle timeout: 10 min. Current group: training_group-2
02:29:49 Plate:754
02:29:49 + omero logout
02:29:51 + echo omero.host=0bcb327dc185
02:29:51 + echo omero.port=4064
02:29:51 + echo omero.webhost=http://nginx/web
02:29:51 + echo omero.servername=omero
02:29:51 + echo omero.user=training_user
02:29:51 + echo omero.pass=ome
02:29:51 + echo omero.group=training_group
02:29:51 + echo omero.projectid=751
02:29:51 + echo omero.datasetid=752
02:29:51 + echo omero.imageid=1253
02:29:51 + echo omero.plateid=752
02:29:51 + echo omero.screenid=751
02:29:51 + echo omero.group2=training_group-2
02:29:51 + echo omero.ladmin=ladmin_user
02:29:51 + rm 'SPW&plates=1&plateRows=1&plateCols=3&fields=1&plateAcqs=1.fake' test.fake 'test&sizeT=10&sizeZ=5&sizeC=3.fake'
02:29:51 + mv training_ice.config /home/omero/workspace/OMERO-training/openmicroscopy/examples/Training
02:29:51 + omero sessions clear
02:29:53 1 session(s) cleared
02:29:53 !! 07/27/26 02:29:53.635 error: communicator not destroyed during global destruction.+ export ICE_CONFIG=/home/omero/workspace/OMERO-training/openmicroscopy/examples/Training/training_ice.config
02:29:53 + ICE_CONFIG=/home/omero/workspace/OMERO-training/openmicroscopy/examples/Training/training_ice.config
02:29:53 + pip install --upgrade requests
02:29:54 Requirement already satisfied: requests in /home/omero/workspace/OMERO-training/.venv3/lib64/python3.11/site-packages (2.34.2)
02:29:54 Requirement already satisfied: charset_normalizer<4,>=2 in /home/omero/workspace/OMERO-training/.venv3/lib64/python3.11/site-packages (from requests) (3.4.9)
02:29:54 Requirement already satisfied: idna<4,>=2.5 in /home/omero/workspace/OMERO-training/.venv3/lib64/python3.11/site-packages (from requests) (3.18)
02:29:54 Requirement already satisfied: urllib3<3,>=1.26 in /home/omero/workspace/OMERO-training/.venv3/lib64/python3.11/site-packages (from requests) (2.7.0)
02:29:54 Requirement already satisfied: certifi>=2023.5.7 in /home/omero/workspace/OMERO-training/.venv3/lib64/python3.11/site-packages (from requests) (2026.7.22)
02:29:54 + python /home/omero/workspace/OMERO-training/openmicroscopy/examples/Training/python
02:30:04 Running training suite
02:30:04 created 20 shapes
02:30:04 retrieved 20 shapes in 4 batches
02:30:04 Current user:
02:30:04 ID: 2
02:30:04 Username: training_user
02:30:04 Full Name: training_user training_user
02:30:04 Is Admin: False
02:30:04 []
02:30:04 Member of:
02:30:04 ID: 3 Name: training_group
02:30:04 ID: 4 Name: training_group-2
02:30:04 Current group: training_group
02:30:04 Group owners:
02:30:04 Group members:
02:30:04 ID: 3 UserName: training_user-2 Name: training_user-2 training_user-2
02:30:04 ID: 4 UserName: ladmin_user Name: ladmin_user ladmin_user
02:30:04 ID: 2 UserName: training_user Name: training_user training_user
02:30:04 Owner of:
02:30:04 Admins:
02:30:04 ID: 0 UserName: root Name: root root
02:30:04 ID: 4 UserName: ladmin_user Name: ladmin_user ladmin_user
02:30:04 ID: 52 UserName: <hidden> Name: <hidden> <hidden>
02:30:04 Created new Image:1259 Name:"numpy image"
02:30:04 newPlane for z,t: 0 0 uint8 0 127
02:30:04 newPlane for z,t: 0 1 uint8 0 127
02:30:04 newPlane for z,t: 0 2 uint8 0 127
02:30:04 newPlane for z,t: 0 3 uint8 0 127
02:30:04 newPlane for z,t: 0 4 uint8 0 127
02:30:04 newPlane for z,t: 0 5 uint8 0 127
02:30:04 newPlane for z,t: 0 6 uint8 0 127
02:30:04 newPlane for z,t: 0 7 uint8 0 127
02:30:04 newPlane for z,t: 0 8 uint8 0 127
02:30:04 newPlane for z,t: 0 9 uint8 0 127
02:30:04 newPlane for z,t: 1 0 uint8 0 127
02:30:04 newPlane for z,t: 1 1 uint8 0 127
02:30:04 newPlane for z,t: 1 2 uint8 0 127
02:30:04 newPlane for z,t: 1 3 uint8 0 127
02:30:04 newPlane for z,t: 1 4 uint8 0 127
02:30:04 newPlane for z,t: 1 5 uint8 0 127
02:30:04 newPlane for z,t: 1 6 uint8 0 127
02:30:04 newPlane for z,t: 1 7 uint8 0 127
02:30:04 newPlane for z,t: 1 8 uint8 0 127
02:30:04 newPlane for z,t: 1 9 uint8 0 127
02:30:04 newPlane for z,t: 2 0 uint8 0 127
02:30:04 newPlane for z,t: 2 1 uint8 0 127
02:30:04 newPlane for z,t: 2 2 uint8 0 127
02:30:04 newPlane for z,t: 2 3 uint8 0 127
02:30:04 newPlane for z,t: 2 4 uint8 0 127
02:30:04 newPlane for z,t: 2 5 uint8 0 127
02:30:04 newPlane for z,t: 2 6 uint8 0 127
02:30:04 newPlane for z,t: 2 7 uint8 0 127
02:30:04 newPlane for z,t: 2 8 uint8 0 127
02:30:04 newPlane for z,t: 2 9 uint8 0 127
02:30:04 newPlane for z,t: 3 0 uint8 0 127
02:30:04 newPlane for z,t: 3 1 uint8 0 127
02:30:04 newPlane for z,t: 3 2 uint8 0 127
02:30:04 newPlane for z,t: 3 3 uint8 0 127
02:30:04 newPlane for z,t: 3 4 uint8 0 127
02:30:04 newPlane for z,t: 3 5 uint8 0 127
02:30:04 newPlane for z,t: 3 6 uint8 0 127
02:30:04 newPlane for z,t: 3 7 uint8 0 127
02:30:04 newPlane for z,t: 3 8 uint8 0 127
02:30:04 newPlane for z,t: 3 9 uint8 0 127
02:30:04 newPlane for z,t: 4 0 uint8 0 127
02:30:04 newPlane for z,t: 4 1 uint8 0 127
02:30:04 newPlane for z,t: 4 2 uint8 0 127
02:30:04 newPlane for z,t: 4 3 uint8 0 127
02:30:04 newPlane for z,t: 4 4 uint8 0 127
02:30:04 newPlane for z,t: 4 5 uint8 0 127
02:30:04 newPlane for z,t: 4 6 uint8 0 127
02:30:04 newPlane for z,t: 4 7 uint8 0 127
02:30:04 newPlane for z,t: 4 8 uint8 0 127
02:30:04 newPlane for z,t: 4 9 uint8 0 127
02:30:04 Deleting, please wait.
02:30:04 Error? False
02:30:04 1253 test&sizeT=10&sizeZ=5&sizeC=3.fake
02:30:04 training_user_2/Blitz-0-Ice.ThreadPool.Server-10/2026-07/27/02-28-46.828/ test&sizeT=10&sizeZ=5&sizeC=3.fake
02:30:04 1
02:30:04 training_user_2/Blitz-0-Ice.ThreadPool.Server-10/2026-07/27/02-28-46.828/ test&sizeT=10&sizeZ=5&sizeC=3.fake
02:30:04 Current group: training_group
02:30:04 Permissions: READ-ONLY (rwr---)
02:30:04 Project 0 Owner: training_user-2 training_user-2
02:30:04 Project 1 Owner: training_user training_user
02:30:04 Project 0 Owner: training_user-2 training_user-2
02:30:04 Project 1 Owner: training_user training_user
02:30:04 Project 0 Owner: training_user-2 training_user-2
02:30:04 Project 1 Owner: training_user training_user
02:30:04 Project 0 Owner: training_user-2 training_user-2
02:30:04 Project 1 Owner: training_user training_user
02:30:04 Project 0 Owner: training_user-2 training_user-2
02:30:04 Project 1 Owner: training_user training_user
02:30:04 Project 0 Owner: training_user-2 training_user-2
02:30:04 Project 1 Owner: training_user training_user
02:30:04 Project 0 Owner: training_user-2 training_user-2
02:30:04 Project 1 Owner: training_user training_user
02:30:04 Project 0 Owner: training_user-2 training_user-2
02:30:04 Project 1 Owner: training_user training_user
02:30:04 Project 0 Owner: training_user-2 training_user-2
02:30:04 Project 1 Owner: training_user training_user
02:30:04 Project 0 Owner: training_user-2 training_user-2
02:30:04 Project 1 Owner: training_user training_user
02:30:04 Project 0 Owner: training_user-2 training_user-2
02:30:04 Project 1 Owner: training_user training_user
02:30:04 Project 0 Owner: training_user-2 training_user-2
02:30:04 Project 1 Owner: training_user training_user
02:30:04 Project 0 Owner: training_user-2 training_user-2
02:30:04 Project 1 Owner: training_user training_user
02:30:04 Project 0 Owner: training_user-2 training_user-2
02:30:04 Project 1 Owner: training_user training_user
02:30:04 Project 0 Owner: training_user-2 training_user-2
02:30:04 Project 1 Owner: training_user training_user
02:30:04 Project 0 Owner: training_user-2 training_user-2
02:30:04 Project 1 Owner: training_user training_user
02:30:04 Image: <_ImageWrapper id=1253>
02:30:04 Image: <_ImageWrapper id=1253> Group: training_group 3
02:30:04 Image: <_ImageWrapper id=1253> Channel: 0
02:30:04 Channel: 1
02:30:04 Channel: 2
02:30:04
02:30:04
02:30:04 original_metadata
02:30:04 global_metadata
02:30:04 series_metadata
02:30:04
02:30:04 Plane at zct: 0 0 0
02:30:04 [[ 0 0 0 ... 253 254 255]
02:30:04 [ 0 0 0 ... 253 254 255]
02:30:04 [ 0 0 0 ... 253 254 255]
02:30:04 ...
02:30:04 [ 0 1 2 ... 253 254 255]
02:30:04 [ 0 1 2 ... 253 254 255]
02:30:04 [ 0 1 2 ... 253 254 255]]
02:30:04 shape: (512, 512)
02:30:04 min: 0 max: 255 pixel type: uint8
02:30:04
02:30:04 Z stack of tiles:
02:30:04 Tile: (0, 0, 0, (50, 50, 10, 10)) min: 50 max: 59 sum: 5450
02:30:04 Tile: (1, 0, 0, (50, 50, 10, 10)) min: 50 max: 59 sum: 5450
02:30:04 Tile: (2, 0, 0, (50, 50, 10, 10)) min: 50 max: 59 sum: 5450
02:30:04 Tile: (3, 0, 0, (50, 50, 10, 10)) min: 50 max: 59 sum: 5450
02:30:04 Tile: (4, 0, 0, (50, 50, 10, 10)) min: 50 max: 59 sum: 5450
02:30:04
02:30:04 Hyper stack of planes:
02:30:04 plane zct: (2, 0, 0) min: 0 max: 255
02:30:04 plane zct: (2, 0, 1) min: 0 max: 255
02:30:04 plane zct: (2, 0, 2) min: 0 max: 255
02:30:04 plane zct: (2, 0, 3) min: 0 max: 255
02:30:04 plane zct: (2, 0, 4) min: 0 max: 255
02:30:04 plane zct: (2, 0, 5) min: 0 max: 255
02:30:04 plane zct: (2, 0, 6) min: 0 max: 255
02:30:04 plane zct: (2, 0, 7) min: 0 max: 255
02:30:04 plane zct: (2, 0, 8) min: 0 max: 255
02:30:04 plane zct: (2, 0, 9) min: 0 max: 255
02:30:04 plane zct: (2, 1, 0) min: 0 max: 255
02:30:04 plane zct: (2, 1, 1) min: 0 max: 255
02:30:04 plane zct: (2, 1, 2) min: 0 max: 255
02:30:04 plane zct: (2, 1, 3) min: 0 max: 255
02:30:04 plane zct: (2, 1, 4) min: 0 max: 255
02:30:04 plane zct: (2, 1, 5) min: 0 max: 255
02:30:04 plane zct: (2, 1, 6) min: 0 max: 255
02:30:04 plane zct: (2, 1, 7) min: 0 max: 255
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02:30:05
02:30:05 List Projects:
02:30:05 ==================================================
02:30:05 Project:1 Name:"Project 1" (owner=training_user)
02:30:05 Dataset:1 Name:"Dataset 1-1" (owner=training_user)
02:30:05 Image:1 Name:"test.fake" (owner=training_user)
02:30:05 Dataset:2 Name:"Dataset 1-2" (owner=training_user)
02:30:05 Image:12 Name:"New Image" (owner=training_user)
02:30:05 Image:13 Name:"newImageFrom3" (owner=training_user)
02:30:05 Image:2 Name:"test.fake" (owner=training_user)
02:30:05 Dataset:7 Name:"New Dataset" (owner=training_user)
02:30:05 Dataset:17 Name:"new Name 1" (owner=training_user)
02:30:05 Dataset:18 Name:"new Name 2" (owner=training_user)
02:30:05 Project:51 Name:"Project 1" (owner=training_user)
02:30:05 Dataset:51 Name:"Dataset 1-1" (owner=training_user)
02:30:05 Image:51 Name:"test.fake" (owner=training_user)
02:30:05 Dataset:52 Name:"Dataset 1-2" (owner=training_user)
02:30:05 Image:62 Name:"New Image" (owner=training_user)
02:30:05 Image:63 Name:"newImageFrom53" (owner=training_user)
02:30:05 Image:52 Name:"test.fake" (owner=training_user)
02:30:05 Dataset:57 Name:"New Dataset" (owner=training_user)
02:30:05 Dataset:67 Name:"new Name 1" (owner=training_user)
02:30:05 Dataset:68 Name:"new Name 2" (owner=training_user)
02:30:05 Project:101 Name:"Project 1" (owner=training_user)
02:30:05 Dataset:101 Name:"Dataset 1-1" (owner=training_user)
02:30:05 Image:101 Name:"test.fake" (owner=training_user)
02:30:05 Dataset:102 Name:"Dataset 1-2" (owner=training_user)
02:30:05 Image:112 Name:"New Image" (owner=training_user)
02:30:05 Image:113 Name:"newImageFrom103" (owner=training_user)
02:30:05 Image:102 Name:"test.fake" (owner=training_user)
02:30:05 Dataset:107 Name:"New Dataset" (owner=training_user)
02:30:05 Dataset:117 Name:"new Name 1" (owner=training_user)
02:30:05 Dataset:118 Name:"new Name 2" (owner=training_user)
02:30:05 Project:151 Name:"Project 1" (owner=training_user)
02:30:05 Dataset:151 Name:"Dataset 1-1" (owner=training_user)
02:30:05 Image:151 Name:"test.fake" (owner=training_user)
02:30:05 Dataset:152 Name:"Dataset 1-2" (owner=training_user)
02:30:05 Image:162 Name:"New Image" (owner=training_user)
02:30:05 Image:163 Name:"newImageFrom153" (owner=training_user)
02:30:05 Image:152 Name:"test.fake" (owner=training_user)
02:30:05 Dataset:157 Name:"New Dataset" (owner=training_user)
02:30:05 Dataset:167 Name:"new Name 1" (owner=training_user)
02:30:05 Dataset:168 Name:"new Name 2" (owner=training_user)
02:30:05 Project:201 Name:"Project 1" (owner=training_user)
02:30:05 Dataset:201 Name:"Dataset 1-1" (owner=training_user)
02:30:05 Image:201 Name:"test.fake" (owner=training_user)
02:30:05 Dataset:202 Name:"Dataset 1-2" (owner=training_user)
02:30:05 Image:212 Name:"New Image" (owner=training_user)
02:30:05 Image:213 Name:"newImageFrom203" (owner=training_user)
02:30:05 Image:202 Name:"test.fake" (owner=training_user)
02:30:05 Dataset:207 Name:"New Dataset" (owner=training_user)
02:30:05 Dataset:217 Name:"new Name 1" (owner=training_user)
02:30:05 Dataset:218 Name:"new Name 2" (owner=training_user)
02:30:05
02:30:05 List orphaned Datasets:
02:30:05 ==================================================
02:30:05 Dataset:3 Name:"Orphaned dataset 1" (owner=training_user)
02:30:05 Dataset:4 Name:"Orphaned dataset 2" (owner=training_user)
02:30:05 Dataset:5 Name:"Dataset 0" (owner=training_user-2)
02:30:05 Dataset:8 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:9 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:10 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:11 Name:"New Dataset" (owner=training_user)
02:30:05 Dataset:12 Name:"New Dataset2" (owner=training_user)
02:30:05 Dataset:13 Name:"FileAnnotationDelete" (owner=training_user)
02:30:05 Dataset:14 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:15 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:16 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:53 Name:"Orphaned dataset 1" (owner=training_user)
02:30:05 Dataset:54 Name:"Orphaned dataset 2" (owner=training_user)
02:30:05 Dataset:55 Name:"Dataset 0" (owner=training_user-2)
02:30:05 Dataset:58 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:59 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:60 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:61 Name:"New Dataset" (owner=training_user)
02:30:05 Dataset:62 Name:"New Dataset2" (owner=training_user)
02:30:05 Dataset:63 Name:"FileAnnotationDelete" (owner=training_user)
02:30:05 Dataset:64 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:65 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:66 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:103 Name:"Orphaned dataset 1" (owner=training_user)
02:30:05 Dataset:104 Name:"Orphaned dataset 2" (owner=training_user)
02:30:05 Dataset:105 Name:"Dataset 0" (owner=training_user-2)
02:30:05 Dataset:108 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:109 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:110 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:111 Name:"New Dataset" (owner=training_user)
02:30:05 Dataset:112 Name:"New Dataset2" (owner=training_user)
02:30:05 Dataset:113 Name:"FileAnnotationDelete" (owner=training_user)
02:30:05 Dataset:114 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:115 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:116 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:153 Name:"Orphaned dataset 1" (owner=training_user)
02:30:05 Dataset:154 Name:"Orphaned dataset 2" (owner=training_user)
02:30:05 Dataset:155 Name:"Dataset 0" (owner=training_user-2)
02:30:05 Dataset:158 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:159 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:160 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:161 Name:"New Dataset" (owner=training_user)
02:30:05 Dataset:162 Name:"New Dataset2" (owner=training_user)
02:30:05 Dataset:163 Name:"FileAnnotationDelete" (owner=training_user)
02:30:05 Dataset:164 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:165 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:166 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:203 Name:"Orphaned dataset 1" (owner=training_user)
02:30:05 Dataset:204 Name:"Orphaned dataset 2" (owner=training_user)
02:30:05 Dataset:205 Name:"Dataset 0" (owner=training_user-2)
02:30:05 Dataset:208 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:209 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:210 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:211 Name:"New Dataset" (owner=training_user)
02:30:05 Dataset:212 Name:"New Dataset2" (owner=training_user)
02:30:05 Dataset:213 Name:"FileAnnotationDelete" (owner=training_user)
02:30:05 Dataset:214 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:215 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:216 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:253 Name:"Orphaned dataset 1" (owner=training_user)
02:30:05 Dataset:254 Name:"Orphaned dataset 2" (owner=training_user)
02:30:05 Dataset:255 Name:"Dataset 0" (owner=training_user-2)
02:30:05 Dataset:258 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:259 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:260 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:261 Name:"New Dataset" (owner=training_user)
02:30:05 Dataset:262 Name:"New Dataset2" (owner=training_user)
02:30:05 Dataset:263 Name:"FileAnnotationDelete" (owner=training_user)
02:30:05 Dataset:264 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:265 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:266 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:303 Name:"Orphaned dataset 1" (owner=training_user)
02:30:05 Dataset:304 Name:"Orphaned dataset 2" (owner=training_user)
02:30:05 Dataset:305 Name:"Dataset 0" (owner=training_user-2)
02:30:05 Dataset:308 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:309 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:310 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:311 Name:"New Dataset" (owner=training_user)
02:30:05 Dataset:312 Name:"New Dataset2" (owner=training_user)
02:30:05 Dataset:313 Name:"FileAnnotationDelete" (owner=training_user)
02:30:05 Dataset:314 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:315 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:316 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:353 Name:"Orphaned dataset 1" (owner=training_user)
02:30:05 Dataset:354 Name:"Orphaned dataset 2" (owner=training_user)
02:30:05 Dataset:355 Name:"Dataset 0" (owner=training_user-2)
02:30:05 Dataset:358 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:359 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:360 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:361 Name:"New Dataset" (owner=training_user)
02:30:05 Dataset:362 Name:"New Dataset2" (owner=training_user)
02:30:05 Dataset:363 Name:"FileAnnotationDelete" (owner=training_user)
02:30:05 Dataset:364 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:365 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:366 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:403 Name:"Orphaned dataset 1" (owner=training_user)
02:30:05 Dataset:404 Name:"Orphaned dataset 2" (owner=training_user)
02:30:05 Dataset:405 Name:"Dataset 0" (owner=training_user-2)
02:30:05 Dataset:408 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:409 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:410 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:411 Name:"New Dataset" (owner=training_user)
02:30:05 Dataset:412 Name:"New Dataset2" (owner=training_user)
02:30:05 Dataset:413 Name:"FileAnnotationDelete" (owner=training_user)
02:30:05 Dataset:414 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:415 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:416 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:453 Name:"Orphaned dataset 1" (owner=training_user)
02:30:05 Dataset:454 Name:"Orphaned dataset 2" (owner=training_user)
02:30:05 Dataset:455 Name:"Dataset 0" (owner=training_user-2)
02:30:05 Dataset:458 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:459 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:460 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:461 Name:"New Dataset" (owner=training_user)
02:30:05 Dataset:462 Name:"New Dataset2" (owner=training_user)
02:30:05 Dataset:463 Name:"FileAnnotationDelete" (owner=training_user)
02:30:05 Dataset:464 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:465 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:466 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:503 Name:"Orphaned dataset 1" (owner=training_user)
02:30:05 Dataset:504 Name:"Orphaned dataset 2" (owner=training_user)
02:30:05 Dataset:505 Name:"Dataset 0" (owner=training_user-2)
02:30:05 Dataset:508 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:509 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:510 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:511 Name:"New Dataset" (owner=training_user)
02:30:05 Dataset:512 Name:"New Dataset2" (owner=training_user)
02:30:05 Dataset:513 Name:"FileAnnotationDelete" (owner=training_user)
02:30:05 Dataset:514 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:515 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:516 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:553 Name:"Orphaned dataset 1" (owner=training_user)
02:30:05 Dataset:554 Name:"Orphaned dataset 2" (owner=training_user)
02:30:05 Dataset:555 Name:"Dataset 0" (owner=training_user-2)
02:30:05 Dataset:558 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:559 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:560 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:561 Name:"New Dataset" (owner=training_user)
02:30:05 Dataset:562 Name:"New Dataset2" (owner=training_user)
02:30:05 Dataset:563 Name:"FileAnnotationDelete" (owner=training_user)
02:30:05 Dataset:564 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:565 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:566 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:603 Name:"Orphaned dataset 1" (owner=training_user)
02:30:05 Dataset:604 Name:"Orphaned dataset 2" (owner=training_user)
02:30:05 Dataset:605 Name:"Dataset 0" (owner=training_user-2)
02:30:05 Dataset:608 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:609 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:610 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:611 Name:"New Dataset" (owner=training_user)
02:30:05 Dataset:612 Name:"New Dataset2" (owner=training_user)
02:30:05 Dataset:613 Name:"FileAnnotationDelete" (owner=training_user)
02:30:05 Dataset:614 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:615 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:616 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:653 Name:"Orphaned dataset 1" (owner=training_user)
02:30:05 Dataset:654 Name:"Orphaned dataset 2" (owner=training_user)
02:30:05 Dataset:655 Name:"Dataset 0" (owner=training_user-2)
02:30:05 Dataset:658 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:659 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:660 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:661 Name:"New Dataset" (owner=training_user)
02:30:05 Dataset:662 Name:"New Dataset2" (owner=training_user)
02:30:05 Dataset:663 Name:"FileAnnotationDelete" (owner=training_user)
02:30:05 Dataset:664 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:665 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:666 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:703 Name:"Orphaned dataset 1" (owner=training_user)
02:30:05 Dataset:704 Name:"Orphaned dataset 2" (owner=training_user)
02:30:05 Dataset:705 Name:"Dataset 0" (owner=training_user-2)
02:30:05 Dataset:708 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:709 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:710 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:711 Name:"New Dataset" (owner=training_user)
02:30:05 Dataset:712 Name:"New Dataset2" (owner=training_user)
02:30:05 Dataset:713 Name:"FileAnnotationDelete" (owner=training_user)
02:30:05 Dataset:714 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:715 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:716 Name:"MyDataset" (owner=training_user)
02:30:05 Dataset:753 Name:"Orphaned dataset 1" (owner=training_user)
02:30:05 Dataset:754 Name:"Orphaned dataset 2" (owner=training_user)
02:30:05 Dataset:755 Name:"Dataset 0" (owner=training_user-2)
02:30:05
02:30:05 Images in Dataset: 752
02:30:05 ==================================================
02:30:05 Image:1252 Name:"test.fake" (owner=training_user)
02:30:05
02:30:05 Image:1253
02:30:05 ==================================================
02:30:05 test&sizeT=10&sizeZ=5&sizeC=3.fake
02:30:05 X: 512
02:30:05 Y: 512
02:30:05 Z: 5
02:30:05 C: 3
02:30:05 T: 10
02:30:05 Channel: 0 Color: (255, 0, 0)
02:30:05 Lookup table: None
02:30:05 Is reverse intensity? False
02:30:05 Channel: 1 Color: (0, 255, 0)
02:30:05 Lookup table: None
02:30:05 Is reverse intensity? False
02:30:05 Channel: 2 Color: (0, 0, 255)
02:30:05 Lookup table: None
02:30:05 Is reverse intensity? False
02:30:05 Pixel Size X: None
02:30:05
02:30:05 List Screens:
02:30:05 ==================================================
02:30:05 Screen:1 Name:"Screen" (owner=training_user)
02:30:05 Plate:1 Name:"Plate" (owner=training_user)
02:30:05 Plate:2 Name:"Plate Name 0" (owner=training_user)
02:30:05 Screen:51 Name:"Screen" (owner=training_user)
02:30:05 Plate:51 Name:"Plate" (owner=training_user)
02:30:05 Plate:52 Name:"Plate Name 0" (owner=training_user)
02:30:05 Screen:101 Name:"Screen" (owner=training_user)
02:30:05 Plate:101 Name:"Plate" (owner=training_user)
02:30:05 Plate:102 Name:"Plate Name 0" (owner=training_user)
02:30:05 Screen:151 Name:"Screen" (owner=training_user)
02:30:05 Plate:151 Name:"Plate" (owner=training_user)
02:30:05 Plate:152 Name:"Plate Name 0" (owner=training_user)
02:30:05 Screen:201 Name:"Screen" (owner=training_user)
02:30:05 Plate:201 Name:"Plate" (owner=training_user)
02:30:05 Plate:202 Name:"Plate Name 0" (owner=training_user)
02:30:05 Screen:251 Name:"Screen" (owner=training_user)
02:30:05 Plate:251 Name:"Plate" (owner=training_user)
02:30:05 Plate:252 Name:"Plate Name 0" (owner=training_user)
02:30:10 Screen:301 Name:"Screen" (owner=training_user)
02:30:10 Plate:301 Name:"Plate" (owner=training_user)
02:30:10 Plate:302 Name:"Plate Name 0" (owner=training_user)
02:30:10 Screen:351 Name:"Screen" (owner=training_user)
02:30:10 Plate:351 Name:"Plate" (owner=training_user)
02:30:10 Plate:352 Name:"Plate Name 0" (owner=training_user)
02:30:10 Screen:401 Name:"Screen" (owner=training_user)
02:30:10 Plate:401 Name:"Plate" (owner=training_user)
02:30:10 Plate:402 Name:"Plate Name 0" (owner=training_user)
02:30:10 Screen:451 Name:"Screen" (owner=training_user)
02:30:10 Plate:451 Name:"Plate" (owner=training_user)
02:30:10 Plate:452 Name:"Plate Name 0" (owner=training_user)
02:30:10 Screen:501 Name:"Screen" (owner=training_user)
02:30:10 Plate:501 Name:"Plate" (owner=training_user)
02:30:10 Plate:502 Name:"Plate Name 0" (owner=training_user)
02:30:10 Screen:551 Name:"Screen" (owner=training_user)
02:30:10 Plate:551 Name:"Plate" (owner=training_user)
02:30:10 Plate:552 Name:"Plate Name 0" (owner=training_user)
02:30:10 Screen:601 Name:"Screen" (owner=training_user)
02:30:10 Plate:601 Name:"Plate" (owner=training_user)
02:30:10 Plate:602 Name:"Plate Name 0" (owner=training_user)
02:30:10 Screen:651 Name:"Screen" (owner=training_user)
02:30:10 Plate:651 Name:"Plate" (owner=training_user)
02:30:10 Plate:652 Name:"Plate Name 0" (owner=training_user)
02:30:10 Screen:701 Name:"Screen" (owner=training_user)
02:30:10 Plate:701 Name:"Plate" (owner=training_user)
02:30:10 Plate:702 Name:"Plate Name 0" (owner=training_user)
02:30:10 Screen:751 Name:"Screen" (owner=training_user)
02:30:10 Plate:751 Name:"Plate" (owner=training_user)
02:30:10 Plate:752 Name:"Plate Name 0" (owner=training_user)
02:30:10 Screen:2 Name:"Screen" (owner=training_user-2)
02:30:10 Screen:52 Name:"Screen" (owner=training_user-2)
02:30:10 Screen:102 Name:"Screen" (owner=training_user-2)
02:30:10 Screen:152 Name:"Screen" (owner=training_user-2)
02:30:10 Screen:202 Name:"Screen" (owner=training_user-2)
02:30:10 Screen:252 Name:"Screen" (owner=training_user-2)
02:30:10 Screen:302 Name:"Screen" (owner=training_user-2)
02:30:10 Screen:352 Name:"Screen" (owner=training_user-2)
02:30:10 Screen:402 Name:"Screen" (owner=training_user-2)
02:30:10 Screen:452 Name:"Screen" (owner=training_user-2)
02:30:10 Screen:502 Name:"Screen" (owner=training_user-2)
02:30:10 Screen:552 Name:"Screen" (owner=training_user-2)
02:30:10 Screen:602 Name:"Screen" (owner=training_user-2)
02:30:10 Screen:652 Name:"Screen" (owner=training_user-2)
02:30:10 Screen:702 Name:"Screen" (owner=training_user-2)
02:30:10 Screen:752 Name:"Screen" (owner=training_user-2)
02:30:10
02:30:10 Plate:752
02:30:10 ==================================================
02:30:10
02:30:10 Number of fields: (0, 0)
02:30:10
02:30:10 Grid size: {'rows': 1, 'columns': 3}
02:30:10
02:30:10 Wells in Plate: Plate Name 0
02:30:10 Well: 0 2 Fields: 1
02:30:10 Image: SPW&plates=1&plateRows=1&plateCols=3&fields=1&plateAcqs=1.fake [SPW 3] 1255
02:30:10 Well: 0 1 Fields: 1
02:30:10 Image: SPW&plates=1&plateRows=1&plateCols=3&fields=1&plateAcqs=1.fake [SPW 2] 1256
02:30:10 Well: 0 0 Fields: 1
02:30:10 Image: SPW&plates=1&plateRows=1&plateCols=3&fields=1&plateAcqs=1.fake [SPW] 1254
02:30:10 3251 <class 'omero.model.MapAnnotationI'>
02:30:10 added by training_user
02:30:10 Image ID: 1253
02:30:10 Annotation ID: 3251
02:30:10 1253
02:30:10 Channel rendering settings:
02:30:10 Name: 0
02:30:10 Color: FF0000
02:30:10 Active: True
02:30:10 Levels: 0.0 - 255.0
02:30:10 Name: 1
02:30:10 Color: 00FF00
02:30:10 Active: True
02:30:10 Levels: 0.0 - 255.0
02:30:10 Name: 2
02:30:10 Color: 0000FF
02:30:10 Active: True
02:30:10 Levels: 0.0 - 255.0
02:30:10 isGreyscaleRenderingModel: False
02:30:10 Default Z/T positions:
02:30:10 Z = 2, T = 0
02:30:10 Rendering Defs on Image:
02:30:10 ID: 1053 (owner: training_user training_user)
02:30:10 Adding a rectangle at theZ: 2, theT: 0, X: 50, Y: 200, width: 100, height: 50
02:30:10 ROI: ID: 752
02:30:10 Shape: id 771 theT 0 theZ 2 textValue test-Rectangle type Rectangle x 50.0 y 200.0 width 100.0 height 50.0
02:30:10 Shape: id 772 theT 0 theZ 2 textValue test-Ellipse type Ellipse x 200.0 y 50.0 radiusX 100.0 radiusY 50.0
02:30:10 ROI: ID: 753
02:30:10 Shape: id 773 theT 0 theZ 2 textValue test-Line type Line x1 50.0 x2 150.0 y1 200.0 y2 250.0
02:30:10 ROI: ID: 754
02:30:10 Shape: id 774 theT 0 theZ 0 textValue test-Mask type Mask x 50.0 y 50.0 width 100.0 height 100.0
02:30:10 ROI: ID: 755
02:30:10 Shape: id 775 theT 0 theZ 2 textValue test-Point type Point x 50.0 y 200.0
02:30:10 ROI: ID: 756
02:30:10 <class 'omero.model.PolygonI'> Not supported by this code
02:30:10 Shape: id 776 theT 0 theZ 2 textValue test-Polygon
02:30:10 Points 10000 Min 50.0 Mean 99.5 Max 149.0 Sum 149.0 StdDev 28.867513459481287
02:30:10 Points 5000 Min 50.0 Mean 99.5 Max 149.0 Sum 149.0 StdDev 28.86895708779012
02:30:10 Points 1 Min 50.0 Mean 50.0 Max 50.0 Sum 50.0 StdDev 0.0
02:30:10 Points 15695 Min 0.0 Mean 157.55208665179993 Max 255.0 Sum 255.0 StdDev 72.87073453134771
02:30:10 Points 101 Min 50.0 Mean 100.0 Max 150.0 Sum 150.0 StdDev 29.300170647967224
02:30:10 Points 25145 Min 10.0 Mean 130.03957049115132 Max 249.0 Sum 249.0 StdDev 57.70727405876767
02:30:10 Removing Shape from ROI...
02:30:10 Deleting ROI: 757
02:30:10 Table Columns:
02:30:10 Uid
02:30:10 MyStringColumnInit
02:30:10 Row count: 10
02:30:10
02:30:10 Get All Data for rows: [3, 5, 7]
02:30:10 Data for Column: Uid
02:30:10 1
02:30:10 2
02:30:10 3
02:30:10 4
02:30:10 5
02:30:10 6
02:30:10 7
02:30:10 8
02:30:10 9
02:30:10 10
02:30:10 Data for Column: MyStringColumnInit
02:30:10 one
02:30:10 two
02:30:10 three
02:30:10 four
02:30:10 five
02:30:10 six
02:30:10 seven
02:30:10 eight
02:30:10 nine
02:30:10 ten
02:30:10
02:30:10 Get All Data for rows with slice: [3, 5, 7]
02:30:10 Data for Column: Uid
02:30:10 4
02:30:10 6
02:30:10 8
02:30:10 Data for Column: MyStringColumnInit
02:30:10 four
02:30:10 six
02:30:10 eight
02:30:10
02:30:10 Get Data for cols: [1] and between rows: 3 - 7
02:30:10 Data for Column: MyStringColumnInit
02:30:10 four
02:30:10 five
02:30:10 six
02:30:10 seven
02:30:10
02:30:10 Get Data for cols: [1] and between rows: 3 - 7 with slice
02:30:10 Data for Column: MyStringColumnInit
02:30:10 four
02:30:10 five
02:30:10 six
02:30:10 seven
02:30:10 Query Results for Column: Uid
02:30:10 3
02:30:10 4
02:30:10 5
02:30:10 6
02:30:10 7
02:30:10 8
02:30:10 Query Results for Column: MyStringColumnInit
02:30:10 three
02:30:10 four
02:30:10 five
02:30:10 six
02:30:10 seven
02:30:10 eight
02:30:10 Opened table with row-count: 10
02:30:10 New dataset, Id: 757
02:30:10 {'TagAnnotation': 1, 'FileAnnotation': 0, 'CommentAnnotation': 0, 'LongAnnotation': 0, 'MapAnnotation': 1, 'OtherAnnotation': 0}
02:30:10 3255 <class 'omero.model.TagAnnotationI'> added by training_user
02:30:10 Tag value: New Tag
02:30:10 3256 <class 'omero.model.MapAnnotationI'> added by training_user
02:30:10
02:30:10 Creating an OriginalFile and FileAnnotation
02:30:10 Attaching FileAnnotation to Dataset: File ID: 3257 , README.txt Size: 15
02:30:10
02:30:10 Annotations on Dataset: New Dataset
02:30:10 File ID: 2098 README.txt Size: 15
02:30:10
02:30:10 Downloading file to /home/omero/workspace/OMERO-training/openmicroscopy/examples/Training/python/download/README.txt ...
02:30:10 File downloaded!
02:30:10 407 README.txt
02:30:10 507 README.txt
02:30:10 357 README.txt
02:30:10 3257 README.txt
02:30:10 107 README.txt
02:30:10 257 README.txt
02:30:10 3157 README.txt
02:30:10 3207 README.txt
02:30:10 7 README.txt
02:30:10 57 README.txt
02:30:10 557 README.txt
02:30:10 157 README.txt
02:30:10 3107 README.txt
02:30:10 307 README.txt
02:30:10 207 README.txt
02:30:10 457 README.txt
02:30:10 Found Annotation with namespace: imperial.training.demo
02:30:10 Plane: 0 0 0
02:30:10 Applying channel Names: ['0', '1', '2'] Colors: [(255, 0, 0), (0, 255, 0), (0, 0, 255)]
02:30:10 [(0.0, 255.0), (0.0, 255.0), (0.0, 255.0)]
02:30:10
02:30:10 List Datasets:
02:30:10 ID: 760 Name: MyDataset
02:30:10 ID: 759 Name: MyDataset
02:30:10 ID: 758 Name: MyDataset
02:30:10 ID: 716 Name: MyDataset
02:30:10 ID: 715 Name: MyDataset
02:30:10 ID: 714 Name: MyDataset
02:30:10 ID: 710 Name: MyDataset
02:30:10 ID: 709 Name: MyDataset
02:30:10 ID: 708 Name: MyDataset
02:30:10 ID: 666 Name: MyDataset
02:30:10 ID: 665 Name: MyDataset
02:30:10 ID: 664 Name: MyDataset
02:30:10 ID: 660 Name: MyDataset
02:30:10 ID: 659 Name: MyDataset
02:30:10 ID: 658 Name: MyDataset
02:30:10 ID: 616 Name: MyDataset
02:30:10 ID: 615 Name: MyDataset
02:30:10 ID: 614 Name: MyDataset
02:30:10 ID: 610 Name: MyDataset
02:30:10 ID: 609 Name: MyDataset
02:30:10 ID: 608 Name: MyDataset
02:30:10 ID: 566 Name: MyDataset
02:30:10 ID: 565 Name: MyDataset
02:30:10 ID: 564 Name: MyDataset
02:30:10 ID: 560 Name: MyDataset
02:30:10 ID: 559 Name: MyDataset
02:30:10 ID: 558 Name: MyDataset
02:30:10 ID: 516 Name: MyDataset
02:30:10 ID: 515 Name: MyDataset
02:30:10 ID: 514 Name: MyDataset
02:30:10 ID: 510 Name: MyDataset
02:30:10 ID: 509 Name: MyDataset
02:30:10 ID: 508 Name: MyDataset
02:30:10 ID: 466 Name: MyDataset
02:30:10 ID: 465 Name: MyDataset
02:30:10 ID: 464 Name: MyDataset
02:30:10 ID: 460 Name: MyDataset
02:30:10 ID: 459 Name: MyDataset
02:30:10 ID: 458 Name: MyDataset
02:30:10 ID: 416 Name: MyDataset
02:30:10 ID: 415 Name: MyDataset
02:30:10 ID: 414 Name: MyDataset
02:30:10 ID: 410 Name: MyDataset
02:30:10 ID: 409 Name: MyDataset
02:30:10 ID: 408 Name: MyDataset
02:30:10 ID: 366 Name: MyDataset
02:30:10 ID: 365 Name: MyDataset
02:30:10 ID: 364 Name: MyDataset
02:30:10 ID: 360 Name: MyDataset
02:30:10 ID: 359 Name: MyDataset
02:30:10 ID: 358 Name: MyDataset
02:30:10 ID: 316 Name: MyDataset
02:30:10 ID: 315 Name: MyDataset
02:30:10 ID: 314 Name: MyDataset
02:30:10 ID: 310 Name: MyDataset
02:30:10 ID: 309 Name: MyDataset
02:30:10 ID: 308 Name: MyDataset
02:30:10 ID: 266 Name: MyDataset
02:30:10 ID: 265 Name: MyDataset
02:30:10 ID: 264 Name: MyDataset
02:30:10 ID: 260 Name: MyDataset
02:30:10 ID: 259 Name: MyDataset
02:30:10 ID: 258 Name: MyDataset
02:30:20 ID: 216 Name: MyDataset
02:30:20 ID: 215 Name: MyDataset
02:30:20 ID: 214 Name: MyDataset
02:30:20 ID: 210 Name: MyDataset
02:30:20 ID: 209 Name: MyDataset
02:30:20 ID: 208 Name: MyDataset
02:30:20 ID: 166 Name: MyDataset
02:30:20 ID: 165 Name: MyDataset
02:30:20 ID: 164 Name: MyDataset
02:30:20 ID: 160 Name: MyDataset
02:30:20 ID: 159 Name: MyDataset
02:30:20 ID: 158 Name: MyDataset
02:30:20 ID: 116 Name: MyDataset
02:30:20 ID: 115 Name: MyDataset
02:30:20 ID: 114 Name: MyDataset
02:30:20 ID: 110 Name: MyDataset
02:30:20 ID: 109 Name: MyDataset
02:30:20 ID: 108 Name: MyDataset
02:30:20 ID: 66 Name: MyDataset
02:30:20 ID: 65 Name: MyDataset
02:30:20 ID: 64 Name: MyDataset
02:30:20 ID: 60 Name: MyDataset
02:30:20 ID: 59 Name: MyDataset
02:30:20 ID: 58 Name: MyDataset
02:30:20 ID: 16 Name: MyDataset
02:30:20 ID: 15 Name: MyDataset
02:30:20 ID: 14 Name: MyDataset
02:30:20 ID: 10 Name: MyDataset
02:30:20 ID: 9 Name: MyDataset
02:30:20 ID: 8 Name: MyDataset
02:30:20
02:30:20 List Tags:
02:30:20 ID: 8 Text: MyTag Desc: MyTag 0
02:30:20 ID: 9 Text: MyTag Desc: MyTag 1
02:30:20 ID: 10 Text: MyTag Desc: MyTag 2
02:30:20 ID: 16 Text: MyTag Desc: MyTag 0
02:30:20 ID: 17 Text: MyTag Desc: MyTag 1
02:30:20 ID: 18 Text: MyTag Desc: MyTag 2
02:30:20 ID: 58 Text: MyTag Desc: MyTag 0
02:30:20 ID: 59 Text: MyTag Desc: MyTag 1
02:30:20 ID: 60 Text: MyTag Desc: MyTag 2
02:30:20 ID: 66 Text: MyTag Desc: MyTag 0
02:30:20 ID: 67 Text: MyTag Desc: MyTag 1
02:30:20 ID: 68 Text: MyTag Desc: MyTag 2
02:30:20 ID: 108 Text: MyTag Desc: MyTag 0
02:30:20 ID: 109 Text: MyTag Desc: MyTag 1
02:30:20 ID: 110 Text: MyTag Desc: MyTag 2
02:30:20 ID: 116 Text: MyTag Desc: MyTag 0
02:30:20 ID: 117 Text: MyTag Desc: MyTag 1
02:30:20 ID: 118 Text: MyTag Desc: MyTag 2
02:30:20 ID: 158 Text: MyTag Desc: MyTag 0
02:30:20 ID: 159 Text: MyTag Desc: MyTag 1
02:30:20 ID: 160 Text: MyTag Desc: MyTag 2
02:30:20 ID: 166 Text: MyTag Desc: MyTag 0
02:30:20 ID: 167 Text: MyTag Desc: MyTag 1
02:30:20 ID: 168 Text: MyTag Desc: MyTag 2
02:30:20 ID: 208 Text: MyTag Desc: MyTag 0
02:30:20 ID: 209 Text: MyTag Desc: MyTag 1
02:30:20 ID: 210 Text: MyTag Desc: MyTag 2
02:30:20 ID: 216 Text: MyTag Desc: MyTag 0
02:30:20 ID: 217 Text: MyTag Desc: MyTag 1
02:30:20 ID: 218 Text: MyTag Desc: MyTag 2
02:30:20 ID: 258 Text: MyTag Desc: MyTag 0
02:30:20 ID: 259 Text: MyTag Desc: MyTag 1
02:30:20 ID: 260 Text: MyTag Desc: MyTag 2
02:30:20 ID: 266 Text: MyTag Desc: MyTag 0
02:30:20 ID: 267 Text: MyTag Desc: MyTag 1
02:30:20 ID: 268 Text: MyTag Desc: MyTag 2
02:30:20 ID: 308 Text: MyTag Desc: MyTag 0
02:30:20 ID: 309 Text: MyTag Desc: MyTag 1
02:30:20 ID: 310 Text: MyTag Desc: MyTag 2
02:30:20 ID: 316 Text: MyTag Desc: MyTag 0
02:30:20 ID: 317 Text: MyTag Desc: MyTag 1
02:30:20 ID: 318 Text: MyTag Desc: MyTag 2
02:30:20 ID: 358 Text: MyTag Desc: MyTag 0
02:30:20 ID: 359 Text: MyTag Desc: MyTag 1
02:30:20 ID: 360 Text: MyTag Desc: MyTag 2
02:30:20 ID: 366 Text: MyTag Desc: MyTag 0
02:30:20 ID: 367 Text: MyTag Desc: MyTag 1
02:30:20 ID: 368 Text: MyTag Desc: MyTag 2
02:30:20 ID: 408 Text: MyTag Desc: MyTag 0
02:30:20 ID: 409 Text: MyTag Desc: MyTag 1
02:30:20 ID: 410 Text: MyTag Desc: MyTag 2
02:30:20 ID: 416 Text: MyTag Desc: MyTag 0
02:30:20 ID: 417 Text: MyTag Desc: MyTag 1
02:30:20 ID: 418 Text: MyTag Desc: MyTag 2
02:30:20 ID: 458 Text: MyTag Desc: MyTag 0
02:30:20 ID: 459 Text: MyTag Desc: MyTag 1
02:30:20 ID: 460 Text: MyTag Desc: MyTag 2
02:30:20 ID: 466 Text: MyTag Desc: MyTag 0
02:30:20 ID: 467 Text: MyTag Desc: MyTag 1
02:30:20 ID: 468 Text: MyTag Desc: MyTag 2
02:30:20 ID: 508 Text: MyTag Desc: MyTag 0
02:30:20 ID: 509 Text: MyTag Desc: MyTag 1
02:30:20 ID: 510 Text: MyTag Desc: MyTag 2
02:30:20 ID: 516 Text: MyTag Desc: MyTag 0
02:30:20 ID: 517 Text: MyTag Desc: MyTag 1
02:30:20 ID: 518 Text: MyTag Desc: MyTag 2
02:30:20 ID: 558 Text: MyTag Desc: MyTag 0
02:30:20 ID: 559 Text: MyTag Desc: MyTag 1
02:30:20 ID: 560 Text: MyTag Desc: MyTag 2
02:30:20 ID: 566 Text: MyTag Desc: MyTag 0
02:30:20 ID: 567 Text: MyTag Desc: MyTag 1
02:30:20 ID: 568 Text: MyTag Desc: MyTag 2
02:30:20 ID: 3108 Text: MyTag Desc: MyTag 0
02:30:20 ID: 3109 Text: MyTag Desc: MyTag 1
02:30:20 ID: 3110 Text: MyTag Desc: MyTag 2
02:30:20 ID: 3116 Text: MyTag Desc: MyTag 0
02:30:20 ID: 3117 Text: MyTag Desc: MyTag 1
02:30:20 ID: 3118 Text: MyTag Desc: MyTag 2
02:30:20 ID: 3158 Text: MyTag Desc: MyTag 0
02:30:20 ID: 3159 Text: MyTag Desc: MyTag 1
02:30:20 ID: 3160 Text: MyTag Desc: MyTag 2
02:30:20 ID: 3166 Text: MyTag Desc: MyTag 0
02:30:20 ID: 3167 Text: MyTag Desc: MyTag 1
02:30:20 ID: 3168 Text: MyTag Desc: MyTag 2
02:30:20 ID: 3208 Text: MyTag Desc: MyTag 0
02:30:20 ID: 3209 Text: MyTag Desc: MyTag 1
02:30:20 ID: 3210 Text: MyTag Desc: MyTag 2
02:30:20 ID: 3216 Text: MyTag Desc: MyTag 0
02:30:20 ID: 3217 Text: MyTag Desc: MyTag 1
02:30:20 ID: 3218 Text: MyTag Desc: MyTag 2
02:30:20 ID: 3258 Text: MyTag Desc: MyTag 0
02:30:20 ID: 3259 Text: MyTag Desc: MyTag 1
02:30:20 ID: 3260 Text: MyTag Desc: MyTag 2
02:30:20 New dataset, Id: 761
02:30:20 New dataset 2, Id: 762
02:30:20 test&sizeT=10&sizeZ=5&sizeC=3.fake
02:30:20 Tile at zct tile: 2 0 0 (5, 5, 100, 100)
02:30:20 [[ 0 0 0 ... 102 103 104]
02:30:20 [ 0 0 0 ... 102 103 104]
02:30:20 [ 0 0 0 ... 102 103 104]
02:30:20 ...
02:30:20 [ 5 6 7 ... 102 103 104]
02:30:20 [ 5 6 7 ... 102 103 104]
02:30:20 [ 5 6 7 ... 102 103 104]]
02:30:20 shape: (100, 100)
02:30:20 min: 0 max: 104 pixel type: uint8
02:30:20 Average : 53.9125
02:30:20 Getting data for T, tile: 0 (256, 0, 10, 512)
02:30:20 Getting data for T, tile: 1 (256, 0, 10, 512)
02:30:20 Getting data for T, tile: 2 (256, 0, 10, 512)
02:30:20 Getting data for T, tile: 3 (256, 0, 10, 512)
02:30:20 Getting data for T, tile: 4 (256, 0, 10, 512)
02:30:20 Getting data for T, tile: 5 (256, 0, 10, 512)
02:30:20 Getting data for T, tile: 6 (256, 0, 10, 512)
02:30:20 Getting data for T, tile: 7 (256, 0, 10, 512)
02:30:20 Getting data for T, tile: 8 (256, 0, 10, 512)
02:30:20 Getting data for T, tile: 9 (256, 0, 10, 512)
02:30:20 kymograph_data (512, 100)
02:30:20 Attaching kymograph.png to image
02:30:20 test&sizeT=10&sizeZ=5&sizeC=3.fake
02:30:20 Tile at zct tile: 2 0 0 (5, 5, 100, 100)
02:30:20 [[ 0 0 0 ... 102 103 104]
02:30:20 [ 0 0 0 ... 102 103 104]
02:30:20 [ 0 0 0 ... 102 103 104]
02:30:20 ...
02:30:20 [ 5 6 7 ... 102 103 104]
02:30:20 [ 5 6 7 ... 102 103 104]
02:30:20 [ 5 6 7 ... 102 103 104]]
02:30:20 shape: (100, 100)
02:30:20 min: 0 max: 104 pixel type: uint8
02:30:20 Average : 53.9125
02:30:20 Getting data for T, tile: 0 (256, 0, 10, 512)
02:30:20 Getting data for T, tile: 1 (256, 0, 10, 512)
02:30:20 Getting data for T, tile: 2 (256, 0, 10, 512)
02:30:20 Getting data for T, tile: 3 (256, 0, 10, 512)
02:30:20 Getting data for T, tile: 4 (256, 0, 10, 512)
02:30:20 Getting data for T, tile: 5 (256, 0, 10, 512)
02:30:20 Getting data for T, tile: 6 (256, 0, 10, 512)
02:30:20 Getting data for T, tile: 7 (256, 0, 10, 512)
02:30:20 Getting data for T, tile: 8 (256, 0, 10, 512)
02:30:20 Getting data for T, tile: 9 (256, 0, 10, 512)
02:30:20 kymograph_data (512, 100)
02:30:20 Attaching kymograph.png to image
02:30:20 No file downloaded. Project not rated.
02:30:20 New image, Id: 1262
02:30:20 Starting at: http://nginx/web/api/
02:30:20 CSRF token 6gNHzDVUgz2AkP5TNCHPzvyYoQp9hcuA
02:30:20 Servers:
02:30:20 -id: 1
02:30:20 name: omero
02:30:20 host: omero
02:30:20 port: 4064
02:30:20 -id: 2
02:30:20 name: testintegration
02:30:20 host: testintegration
02:30:20 port: 14064
02:30:20 eventContext {'sessionId': 1790, 'sessionUuid': '11798cde-f193-41a1-8625-7e847eec713a', 'userId': 2, 'userName': 'training_user', 'groupId': 3, 'groupName': 'training_group', 'isAdmin': False, 'eventId': -1, 'eventType': 'User', 'memberOfGroups': [3, 4, 1], 'leaderOfGroups': []}
02:30:20 Projects:
02:30:20 2 Project 0
02:30:20 3 Project 0
02:30:20 Created Project: 756 API TEST foo
02:30:20 {'data': {'@type': 'http://www.openmicroscopy.org/Schemas/OME/2016-06#Project', '@id': 756, 'omero:details': {'@type': 'TBD#Details', 'owner': {'@type': 'http://www.openmicroscopy.org/Schemas/OME/2016-06#Experimenter', '@id': 2, 'omero:details': {'@type': 'TBD#Details', 'permissions': {'@type': 'TBD#Permissions', 'perm': 'rw----', 'canAnnotate': True, 'canDelete': False, 'canEdit': False, 'canLink': True, 'isWorldWrite': False, 'isWorldRead': False, 'isGroupWrite': False, 'isGroupRead': False, 'isGroupAnnotate': False, 'isUserWrite': True, 'isUserRead': True}}, 'FirstName': 'training_user', 'MiddleName': '', 'LastName': 'training_user', 'Email': '', 'Institution': '', 'UserName': 'training_user'}, 'group': {'@type': 'http://www.openmicroscopy.org/Schemas/OME/2016-06#ExperimenterGroup', '@id': 3, 'omero:details': {'@type': 'TBD#Details', 'permissions': {'@type': 'TBD#Permissions', 'perm': 'rwr---', 'canAnnotate': True, 'canDelete': False, 'canEdit': False, 'canLink': True, 'isWorldWrite': False, 'isWorldRead': False, 'isGroupWrite': False, 'isGroupRead': True, 'isGroupAnnotate': False, 'isUserWrite': True, 'isUserRead': True}}, 'Name': 'training_group'}, 'permissions': {'@type': 'TBD#Permissions', 'perm': 'rwr---', 'canAnnotate': True, 'canDelete': True, 'canEdit': True, 'canLink': True, 'isWorldWrite': False, 'isWorldRead': False, 'isGroupWrite': False, 'isGroupRead': True, 'isGroupAnnotate': False, 'isUserWrite': True, 'isUserRead': True}}, 'Name': 'API TEST foo', 'url:datasets': 'http://nginx/web/api/v0/m/projects/756/datasets/'}}
02:30:20 !! 07/27/26 02:30:20.695 error: communicator not destroyed during global destruction.+ deactivate
02:30:20 + '[' -n /opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ']'
02:30:20 + PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
02:30:20 + export PATH
02:30:20 + unset _OLD_VIRTUAL_PATH
02:30:20 + '[' -n '' ']'
02:30:20 + hash -r
02:30:20 + '[' -n '' ']'
02:30:20 + unset VIRTUAL_ENV
02:30:20 + unset VIRTUAL_ENV_PROMPT
02:30:20 + '[' '!' '' = nondestructive ']'
02:30:20 + unset -f deactivate
02:30:20 + cd /home/omero/workspace/OMERO-training/openmicroscopy/examples/Training/java/src
02:30:20 + javac --release 11 -cp '.:/home/omero/workspace/OMERO-training/OMERO.server/lib/client/*' training/CreateImage.java training/DeleteData.java training/HowToUseTables.java training/LoadMetadataAdvanced.java training/RawDataAccess.java training/ReadDataAdvanced.java training/ReadData.java training/RenderImages.java training/ROIFolders.java training/ROIs.java training/Setup.java training/Sudo.java training/WriteData.java
02:30:23 Note: Some input files use unchecked or unsafe operations.
02:30:23 Note: Recompile with -Xlint:unchecked for details.
02:30:23 + java -cp '.:/home/omero/workspace/OMERO-training/OMERO.server/lib/client/*' training/Setup
02:30:26 omero.cmd.Delete2Response@5ed731d0
02:30:26 omero.cmd.Delete2Response@58e6d4b8
02:30:27 one [class java.lang.String] 1.0 [class java.lang.Double]
02:30:27 two [class java.lang.String] 2.0 [class java.lang.Double]
02:30:27 three [class java.lang.String] 3.0 [class java.lang.Double]
02:30:27 -1.0
02:30:27 0
02:30:27 1
02:30:27 2
02:30:29 0 |]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]] 1514
02:30:29 1 |]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]] 1014
02:30:29 2 |]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]] 1014
02:30:29 3 |]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]] 1014
02:30:29 4 |]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]] 1014
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02:30:29 241 |]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]] 1024
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02:30:29 245 |]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]] 1024
02:30:29 246 |]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]] 1024
02:30:29 247 |]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]] 1024
02:30:29 248 |]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]] 1024
02:30:29 249 |]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]] 1024
02:30:29 250 |]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]] 1024
02:30:29 251 |]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]] 1024
02:30:29 252 |]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]] 1024
02:30:29 253 |]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]] 1024
02:30:29 254 |]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]] 1024
02:30:29 255 |]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]]] 1024
02:30:29 Project:601 Project 1
02:30:29 dataset:618 new Name 2
02:30:29 dataset:607 New Dataset
02:30:29 dataset:602 Dataset 1-2
02:30:29 dataset:617 new Name 1
02:30:29 dataset:601 Dataset 1-1
02:30:29 Project:2 Project 0
02:30:29 Project:151 Project 1
02:30:29 dataset:152 Dataset 1-2
02:30:29 dataset:157 New Dataset
02:30:29 dataset:151 Dataset 1-1
02:30:29 dataset:168 new Name 2
02:30:29 dataset:167 new Name 1
02:30:29 Project:401 Project 1
02:30:29 dataset:418 new Name 2
02:30:29 dataset:407 New Dataset
02:30:29 dataset:402 Dataset 1-2
02:30:29 dataset:417 new Name 1
02:30:29 dataset:401 Dataset 1-1
02:30:29 Project:252 Project 0
02:30:29 Project:502 Project 0
02:30:29 Project:101 Project 1
02:30:29 dataset:118 new Name 2
02:30:29 dataset:117 new Name 1
02:30:29 dataset:101 Dataset 1-1
02:30:29 dataset:102 Dataset 1-2
02:30:29 dataset:107 New Dataset
02:30:29 Project:752 Project 0
02:30:29 Project:452 Project 0
02:30:29 Project:751 Project 1
02:30:29 dataset:757 New Dataset
02:30:29 dataset:751 Dataset 1-1
02:30:29 dataset:752 Dataset 1-2
02:30:29 Project:302 Project 0
02:30:29 Project:451 Project 1
02:30:29 dataset:468 new Name 2
02:30:29 dataset:452 Dataset 1-2
02:30:29 dataset:451 Dataset 1-1
02:30:29 dataset:457 New Dataset
02:30:29 dataset:467 new Name 1
02:30:29 Project:552 Project 0
02:30:29 Project:351 Project 1
02:30:29 dataset:352 Dataset 1-2
02:30:29 dataset:368 new Name 2
02:30:29 dataset:367 new Name 1
02:30:29 dataset:357 New Dataset
02:30:29 dataset:351 Dataset 1-1
02:30:29 Project:702 Project 0
02:30:29 Project:201 Project 1
02:30:29 dataset:218 new Name 2
02:30:29 dataset:202 Dataset 1-2
02:30:29 dataset:201 Dataset 1-1
02:30:29 dataset:207 New Dataset
02:30:29 dataset:217 new Name 1
02:30:29 Project:251 Project 1
02:30:29 dataset:268 new Name 2
02:30:29 dataset:267 new Name 1
02:30:29 dataset:257 New Dataset
02:30:29 dataset:252 Dataset 1-2
02:30:29 dataset:251 Dataset 1-1
02:30:29 Project:701 Project 1
02:30:29 dataset:707 New Dataset
02:30:29 dataset:702 Dataset 1-2
02:30:29 dataset:701 Dataset 1-1
02:30:29 dataset:717 new Name 1
02:30:29 dataset:718 new Name 2
02:30:29 Project:102 Project 0
02:30:29 Project:402 Project 0
02:30:29 Project:202 Project 0
02:30:29 Project:301 Project 1
02:30:29 dataset:301 Dataset 1-1
02:30:29 dataset:307 New Dataset
02:30:29 dataset:302 Dataset 1-2
02:30:29 dataset:318 new Name 2
02:30:29 dataset:317 new Name 1
02:30:29 Project:51 Project 1
02:30:29 dataset:68 new Name 2
02:30:29 dataset:57 New Dataset
02:30:29 dataset:51 Dataset 1-1
02:30:29 dataset:67 new Name 1
02:30:29 dataset:52 Dataset 1-2
02:30:29 Project:602 Project 0
02:30:29 Project:1 Project 1
02:30:29 dataset:1 Dataset 1-1
02:30:29 dataset:2 Dataset 1-2
02:30:29 dataset:17 new Name 1
02:30:29 dataset:18 new Name 2
02:30:29 dataset:7 New Dataset
02:30:29 Project:352 Project 0
02:30:29 Project:551 Project 1
02:30:29 dataset:568 new Name 2
02:30:29 dataset:552 Dataset 1-2
02:30:29 dataset:557 New Dataset
02:30:29 dataset:567 new Name 1
02:30:29 dataset:551 Dataset 1-1
02:30:29 Project:652 Project 0
02:30:29 Project:52 Project 0
02:30:29 Project:501 Project 1
02:30:29 dataset:502 Dataset 1-2
02:30:29 dataset:507 New Dataset
02:30:29 dataset:517 new Name 1
02:30:29 dataset:518 new Name 2
02:30:29 dataset:501 Dataset 1-1
02:30:29 Project:152 Project 0
02:30:29 Project:651 Project 1
02:30:29 dataset:651 Dataset 1-1
02:30:29 dataset:667 new Name 1
02:30:29 dataset:657 New Dataset
02:30:29 dataset:668 new Name 2
02:30:29 dataset:652 Dataset 1-2
02:30:29 image:1252 test.fake
02:30:29 image:1262 New Image
02:30:29 image:1263 newImageFrom1253
02:30:29 5
02:30:29 10
02:30:29 3
02:30:29 512
02:30:29 512
02:30:30 screen:452 Screen
02:30:30 screen:301 Screen
02:30:30 plate:302 Plate Name 0
02:30:30 plate:301 Plate
02:30:30 screen:601 Screen
02:30:30 plate:602 Plate Name 0
02:30:30 plate:601 Plate
02:30:30 screen:202 Screen
02:30:30 screen:701 Screen
02:30:30 plate:702 Plate Name 0
02:30:30 plate:701 Plate
02:30:30 screen:551 Screen
02:30:30 plate:551 Plate
02:30:30 plate:552 Plate Name 0
02:30:30 screen:752 Screen
02:30:30 screen:51 Screen
02:30:30 plate:52 Plate Name 0
02:30:30 plate:51 Plate
02:30:30 screen:502 Screen
02:30:30 screen:1 Screen
02:30:30 plate:2 Plate Name 0
02:30:30 plate:1 Plate
02:30:30 screen:151 Screen
02:30:30 plate:152 Plate Name 0
02:30:30 plate:151 Plate
02:30:30 screen:152 Screen
02:30:30 screen:352 Screen
02:30:30 screen:201 Screen
02:30:30 plate:202 Plate Name 0
02:30:30 plate:201 Plate
02:30:30 screen:751 Screen
02:30:30 plate:751 Plate
02:30:30 plate:752 Plate Name 0
02:30:30 screen:602 Screen
02:30:30 screen:451 Screen
02:30:30 plate:451 Plate
02:30:30 plate:452 Plate Name 0
02:30:30 screen:402 Screen
02:30:30 screen:501 Screen
02:30:30 plate:501 Plate
02:30:30 plate:502 Plate Name 0
02:30:30 screen:52 Screen
02:30:30 screen:702 Screen
02:30:30 screen:552 Screen
02:30:30 screen:102 Screen
02:30:30 screen:252 Screen
02:30:30 screen:651 Screen
02:30:30 plate:651 Plate
02:30:30 plate:652 Plate Name 0
02:30:30 screen:251 Screen
02:30:30 plate:252 Plate Name 0
02:30:30 plate:251 Plate
02:30:30 screen:101 Screen
02:30:30 plate:102 Plate Name 0
02:30:30 plate:101 Plate
02:30:30 screen:652 Screen
02:30:30 screen:302 Screen
02:30:30 screen:2 Screen
02:30:30 screen:351 Screen
02:30:30 plate:351 Plate
02:30:30 plate:352 Plate Name 0
02:30:30 screen:401 Screen
02:30:30 plate:402 Plate Name 0
02:30:30 plate:401 Plate
02:30:30 well:751
02:30:30 well:752
02:30:30 well:753
02:30:30 plate:751
02:30:30 plate:651
02:30:30 plate:652
02:30:30 plate:1
02:30:30 plate:251
02:30:30 plate:53
02:30:30 plate:153
02:30:30 plate:101
02:30:30 plate:601
02:30:30 plate:352
02:30:30 plate:401
02:30:30 plate:353
02:30:30 plate:703
02:30:30 plate:253
02:30:30 plate:3
02:30:30 plate:102
02:30:30 plate:103
02:30:30 plate:152
02:30:30 plate:551
02:30:30 plate:351
02:30:30 plate:453
02:30:30 plate:302
02:30:30 plate:402
02:30:30 plate:51
02:30:30 plate:201
02:30:30 plate:303
02:30:30 plate:501
02:30:30 plate:753
02:30:30 plate:451
02:30:30 plate:52
02:30:30 plate:203
02:30:30 plate:151
02:30:30 plate:602
02:30:30 plate:301
02:30:30 plate:552
02:30:30 plate:553
02:30:30 plate:502
02:30:30 plate:503
02:30:30 plate:653
02:30:30 plate:701
02:30:30 plate:752
02:30:30 plate:452
02:30:30 plate:603
02:30:30 plate:702
02:30:30 plate:202
02:30:30 plate:403
02:30:30 plate:2
02:30:30 plate:252
02:30:30
02:30:30 List Datasets:
02:30:30 ID: 8 Name: MyDataset
02:30:30 ID: 9 Name: MyDataset
02:30:30 ID: 10 Name: MyDataset
02:30:30 ID: 14 Name: MyDataset
02:30:30 ID: 15 Name: MyDataset
02:30:30 ID: 16 Name: MyDataset
02:30:30 ID: 58 Name: MyDataset
02:30:30 ID: 59 Name: MyDataset
02:30:30 ID: 60 Name: MyDataset
02:30:30 ID: 64 Name: MyDataset
02:30:30
02:30:30 List Tags:
02:30:30 ID: 16 NS: omero.training.demo
02:30:30 ID: 17 NS: omero.training.demo
02:30:30 ID: 18 NS: omero.training.demo
02:30:30 ID: 66 NS: omero.training.demo
02:30:30 ID: 67 NS: omero.training.demo
02:30:30 ID: 68 NS: omero.training.demo
02:30:30 ID: 116 NS: omero.training.demo
02:30:30 ID: 117 NS: omero.training.demo
02:30:30 ID: 118 NS: omero.training.demo
02:30:30 ID: 166 NS: omero.training.demo
02:30:30 Dataset:114 MyDataset
02:30:30 Dataset:758 MyDataset
02:30:30 Dataset:314 MyDataset
02:30:30 Dataset:753 Orphaned dataset 1
02:30:30 Dataset:3 Orphaned dataset 1
02:30:30 Dataset:711 New Dataset
02:30:30 Project:301 Project 1
02:30:30 Dataset:610 MyDataset
02:30:30 Dataset:564 MyDataset
02:30:30 Dataset:12 New Dataset2
02:30:30 Dataset:653 Orphaned dataset 1
02:30:30 Dataset:261 New Dataset
02:30:30 Dataset:110 MyDataset
02:30:30 Dataset:254 Orphaned dataset 2
02:30:30 Dataset:364 MyDataset
02:30:30 Dataset:264 MyDataset
02:30:30 Dataset:461 New Dataset
02:30:30 Dataset:714 MyDataset
02:30:30 Dataset:8 MyDataset
02:30:30 Dataset:413 FileAnnotationDelete
02:30:30 Dataset:311 New Dataset
02:30:30 Dataset:410 MyDataset
02:30:30 Dataset:304 Orphaned dataset 2
02:30:30 Dataset:310 MyDataset
02:30:30 Dataset:359 MyDataset
02:30:30 Dataset:764 MyDataset
02:30:30 Dataset:265 MyDataset
02:30:30 Dataset:112 New Dataset2
02:30:30 Dataset:654 Orphaned dataset 2
02:30:30 Dataset:454 Orphaned dataset 2
02:30:30 Dataset:765 MyDataset
02:30:30 Dataset:512 New Dataset2
02:30:30 Dataset:63 FileAnnotationDelete
02:30:30 Dataset:166 MyDataset
02:30:30 Dataset:308 MyDataset
02:30:30 Project:701 Project 1
02:30:30 Dataset:616 MyDataset
02:30:30 Dataset:15 MyDataset
02:30:30 Dataset:614 MyDataset
02:30:30 Dataset:10 MyDataset
02:30:30 Dataset:463 FileAnnotationDelete
02:30:30 Dataset:710 MyDataset
02:30:30 Project:651 Project 1
02:30:30 Project:401 Project 1
02:30:30 Dataset:754 Orphaned dataset 2
02:30:30 Dataset:716 MyDataset
02:30:30 Dataset:59 MyDataset
02:30:30 Dataset:65 MyDataset
02:30:30 Dataset:209 MyDataset
02:30:30 Dataset:604 Orphaned dataset 2
02:30:30 Dataset:510 MyDataset
02:30:30 Project:201 Project 1
02:30:30 Dataset:312 New Dataset2
02:30:30 Dataset:465 MyDataset
02:30:30 Dataset:416 MyDataset
02:30:30 Dataset:360 MyDataset
02:30:30 Dataset:403 Orphaned dataset 1
02:30:30 Dataset:309 MyDataset
02:30:30 Dataset:715 MyDataset
02:30:30 Dataset:508 MyDataset
02:30:30 Dataset:64 MyDataset
02:30:30 Dataset:665 MyDataset
02:30:30 Dataset:515 MyDataset
02:30:30 Dataset:415 MyDataset
02:30:30 Dataset:115 MyDataset
02:30:30 Dataset:458 MyDataset
02:30:30 Dataset:766 MyDataset
02:30:30 Dataset:203 Orphaned dataset 1
02:30:30 Dataset:663 FileAnnotationDelete
02:30:30 Dataset:11 New Dataset
02:30:30 Dataset:160 MyDataset
02:30:30 Project:551 Project 1
02:30:30 Project:101 Project 1
02:30:30 Dataset:612 New Dataset2
02:30:30 Dataset:113 FileAnnotationDelete
02:30:30 Dataset:761 New Dataset
02:30:30 Dataset:514 MyDataset
02:30:30 Dataset:66 MyDataset
02:30:30 Dataset:366 MyDataset
02:30:30 Dataset:466 MyDataset
02:30:30 Dataset:54 Orphaned dataset 2
02:30:30 Dataset:14 MyDataset
02:30:30 Dataset:660 MyDataset
02:30:30 Project:501 Project 1
02:30:30 Dataset:303 Orphaned dataset 1
02:30:30 Dataset:262 New Dataset2
02:30:30 Dataset:259 MyDataset
02:30:30 Dataset:662 New Dataset2
02:30:30 Dataset:704 Orphaned dataset 2
02:30:30 Dataset:153 Orphaned dataset 1
02:30:30 Dataset:353 Orphaned dataset 1
02:30:30 Dataset:516 MyDataset
02:30:30 Dataset:214 MyDataset
02:30:30 Dataset:16 MyDataset
02:30:30 Dataset:611 New Dataset
02:30:30 Dataset:9 MyDataset
02:30:30 Dataset:666 MyDataset
02:30:30 Dataset:453 Orphaned dataset 1
02:30:30 Dataset:215 MyDataset
02:30:30 Dataset:53 Orphaned dataset 1
02:30:30 Dataset:566 MyDataset
02:30:30 Dataset:361 New Dataset
02:30:30 Dataset:258 MyDataset
02:30:30 Dataset:504 Orphaned dataset 2
02:30:30 Dataset:116 MyDataset
02:30:30 Dataset:511 New Dataset
02:30:30 Project:1 Project 1
02:30:30 Dataset:608 MyDataset
02:30:30 Dataset:409 MyDataset
02:30:30 Dataset:709 MyDataset
02:30:30 Dataset:712 New Dataset2
02:30:30 Dataset:412 New Dataset2
02:30:30 Dataset:513 FileAnnotationDelete
02:30:30 Dataset:760 MyDataset
02:30:30 Dataset:562 New Dataset2
02:30:30 Dataset:58 MyDataset
02:30:30 Dataset:60 MyDataset
02:30:30 Dataset:503 Orphaned dataset 1
02:30:30 Project:601 Project 1
02:30:30 Dataset:216 MyDataset
02:30:30 Dataset:61 New Dataset
02:30:30 Dataset:103 Orphaned dataset 1
02:30:30 Project:351 Project 1
02:30:30 Dataset:158 MyDataset
02:30:30 Dataset:411 New Dataset
02:30:30 Dataset:703 Orphaned dataset 1
02:30:30 Dataset:210 MyDataset
02:30:30 Dataset:558 MyDataset
02:30:30 Dataset:211 New Dataset
02:30:30 Dataset:362 New Dataset2
02:30:30 Dataset:208 MyDataset
02:30:30 Dataset:404 Orphaned dataset 2
02:30:30 Dataset:13 FileAnnotationDelete
02:30:30 Dataset:408 MyDataset
02:30:30 Project:151 Project 1
02:30:30 Dataset:161 New Dataset
02:30:30 Dataset:713 FileAnnotationDelete
02:30:30 Dataset:111 New Dataset
02:30:30 Dataset:266 MyDataset
02:30:30 Dataset:315 MyDataset
02:30:30 Dataset:263 FileAnnotationDelete
02:30:30 Dataset:554 Orphaned dataset 2
02:30:30 Dataset:615 MyDataset
02:30:30 Dataset:159 MyDataset
02:30:30 Dataset:460 MyDataset
02:30:30 Project:251 Project 1
02:30:30 Dataset:658 MyDataset
02:30:30 Dataset:354 Orphaned dataset 2
02:30:30 Dataset:162 New Dataset2
02:30:30 Dataset:561 New Dataset
02:30:30 Dataset:664 MyDataset
02:30:30 Dataset:213 FileAnnotationDelete
02:30:30 Dataset:316 MyDataset
02:30:30 Dataset:4 Orphaned dataset 2
02:30:30 Dataset:212 New Dataset2
02:30:30 Dataset:560 MyDataset
02:30:30 Dataset:313 FileAnnotationDelete
02:30:30 Dataset:565 MyDataset
02:30:30 Dataset:659 MyDataset
02:30:30 Dataset:104 Orphaned dataset 2
02:30:30 Dataset:759 MyDataset
02:30:30 Dataset:762 New Dataset2
02:30:30 Dataset:563 FileAnnotationDelete
02:30:30 Dataset:365 MyDataset
02:30:30 Project:451 Project 1
02:30:30 Dataset:165 MyDataset
02:30:30 Dataset:260 MyDataset
02:30:30 Dataset:559 MyDataset
02:30:30 Project:51 Project 1
02:30:30 Dataset:253 Orphaned dataset 1
02:30:30 Dataset:613 FileAnnotationDelete
02:30:30 Dataset:62 New Dataset2
02:30:30 Dataset:609 MyDataset
02:30:30 Dataset:358 MyDataset
02:30:30 Dataset:661 New Dataset
02:30:30 Dataset:108 MyDataset
02:30:30 Dataset:363 FileAnnotationDelete
02:30:30 Dataset:459 MyDataset
02:30:30 Dataset:763 FileAnnotationDelete
02:30:30 Dataset:603 Orphaned dataset 1
02:30:30 Dataset:553 Orphaned dataset 1
02:30:30 Dataset:204 Orphaned dataset 2
02:30:30 Dataset:708 MyDataset
02:30:30 Dataset:464 MyDataset
02:30:30 Dataset:509 MyDataset
02:30:30 Project:751 Project 1
02:30:30 Dataset:109 MyDataset
02:30:30 Dataset:414 MyDataset
02:30:30 Dataset:154 Orphaned dataset 2
02:30:30 Dataset:462 New Dataset2
02:30:30 Dataset:163 FileAnnotationDelete
02:30:30 Dataset:164 MyDataset
02:30:30 Size:0
02:30:30 512 512
02:30:31 9
02:30:31 9
02:30:31 1
02:30:32 Logged in as ladmin_user
02:30:32 Added 'training_user's tag' to dataset New Dataset on behalf of training_user
02:30:32 Added 'ladmin_user's tag' to dataset New Dataset as admin.
02:30:32 Finished: SUCCESS
