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Skipping 2,130 KB.. Full Log
#14 308.9 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/httpcomponents/httpmime/4.5.13/httpmime-4.5.13.pom
#14 308.9 Progress (1): 2.8/5.2 kB
Progress (1): 5.2 kB    
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/httpcomponents/httpmime/4.5.13/httpmime-4.5.13.pom (5.2 kB at 208 kB/s)
#14 309.0 Downloading from central: https://repo.maven.apache.org/maven2/com/google/re2j/re2j/1.3/re2j-1.3.pom
#14 309.0 Progress (1): 933 B
                   
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#14 309.0 Downloading from central: https://repo.maven.apache.org/maven2/org/slf4j/slf4j-api/1.7.28/slf4j-api-1.7.28.pom
#14 309.0 Progress (1): 2.8/3.8 kB
Progress (1): 3.8 kB    
                    
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#14 309.0 Downloading from central: https://repo.maven.apache.org/maven2/org/slf4j/slf4j-parent/1.7.28/slf4j-parent-1.7.28.pom
#14 309.0 Progress (1): 2.8/14 kB
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#14 309.1 Downloading from central: https://repo.maven.apache.org/maven2/commons-math/commons-math/1.2/commons-math-1.2.pom
#14 309.1 Progress (1): 4.1/13 kB
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#14 309.1 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/commons/commons-parent/7/commons-parent-7.pom
#14 309.1 Progress (1): 4.1/17 kB
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#14 309.1 Downloading from central: https://repo.maven.apache.org/maven2/org/xerial/sqlite-jdbc/3.28.0/sqlite-jdbc-3.28.0.pom
#14 309.1 Progress (1): 4.1/6.3 kB
Progress (1): 6.3 kB    
                    
Downloaded from central: https://repo.maven.apache.org/maven2/org/xerial/sqlite-jdbc/3.28.0/sqlite-jdbc-3.28.0.pom (6.3 kB at 226 kB/s)
#14 309.2 Downloading from central: https://repo.maven.apache.org/maven2/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#14 309.2 Downloading from central: https://repo.maven.apache.org/maven2/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
#14 309.2 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/httpcomponents/httpmime/4.5.13/httpmime-4.5.13.jar
#14 309.2 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/httpcomponents/httpclient/4.5.13/httpclient-4.5.13.jar
#14 309.2 Downloading from central: https://repo.maven.apache.org/maven2/com/google/re2j/re2j/1.3/re2j-1.3.jar
#14 309.2 Progress (1): 2.8/42 kB
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Progress (3): 42 kB | 79/121 kB | 61/780 kB
Progress (3): 42 kB | 84/121 kB | 61/780 kB
                                           
Downloaded from central: https://repo.maven.apache.org/maven2/org/apache/httpcomponents/httpmime/4.5.13/httpmime-4.5.13.jar (42 kB at 696 kB/s)
#14 309.2 Progress (2): 88/121 kB | 61/780 kB
                                   
Downloading from central: https://repo.maven.apache.org/maven2/commons-math/commons-math/1.2/commons-math-1.2.jar
#14 309.2 Progress (2): 92/121 kB | 61/780 kB
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Progress (2): 121 kB | 65/780 kB
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Progress (2): 121 kB | 138/780 kB
Progress (2): 121 kB | 143/780 kB
                                 
Downloaded from central: https://repo.maven.apache.org/maven2/com/google/re2j/re2j/1.3/re2j-1.3.jar (121 kB at 1.6 MB/s)
#14 309.2 Downloading from central: https://repo.maven.apache.org/maven2/org/xerial/sqlite-jdbc/3.28.0/sqlite-jdbc-3.28.0.jar
#14 309.2 Progress (2): 143/780 kB | 2.7/338 kB
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#14 309.3 Progress (2): 780 kB | 0.6/6.0 MB
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#14 309.5 Downloading from unidata.releases: https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#14 309.5 Downloading from unidata.releases: https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
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Downloaded from unidata.releases: https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar (80 kB at 102 kB/s)
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Downloaded from unidata.releases: https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar (4.3 MB at 1.5 MB/s)
#14 312.4 [INFO] 
#14 312.4 [INFO] --- maven-clean-plugin:3.1.0:clean (default-clean) @ formats-gpl ---
#14 312.4 [INFO] 
#14 312.4 [INFO] --- maven-enforcer-plugin:3.0.0-M2:enforce (enforce-versions) @ formats-gpl ---
#14 312.4 [INFO] 
#14 312.4 [INFO] --- buildnumber-maven-plugin:1.4:create (default) @ formats-gpl ---
#14 312.4 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 312.4 [INFO] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 312.4 [INFO] Storing buildNumber: 93f1e5f58e3068adc8fd6b393388e1c1245dce8e at timestamp: 1730333818304
#14 312.4 [WARNING] Cannot get the branch information from the git repository: 
#14 312.4 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 312.4 
#14 312.4 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 312.4 [INFO] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 312.4 [INFO] Storing buildScmBranch: UNKNOWN
#14 312.4 [INFO] 
#14 312.4 [INFO] --- maven-resources-plugin:3.1.0:resources (default-resources) @ formats-gpl ---
#14 312.4 [INFO] Using 'UTF-8' encoding to copy filtered resources.
#14 312.4 [INFO] Copying 1 resource
#14 312.4 [INFO] skip non existing resourceDirectory /bio-formats-build/bioformats/components/formats-gpl/lib
#14 312.4 [INFO] Copying 0 resource
#14 312.4 [INFO] Copying 1 resource
#14 312.4 [INFO] 
#14 312.4 [INFO] --- maven-compiler-plugin:3.7.0:compile (default-compile) @ formats-gpl ---
#14 312.4 [INFO] Changes detected - recompiling the module!
#14 312.4 [INFO] Compiling 173 source files to /bio-formats-build/bioformats/components/formats-gpl/target/classes
#14 314.5 [INFO] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java: Some input files use or override a deprecated API.
#14 314.5 [INFO] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java: Recompile with -Xlint:deprecation for details.
#14 314.5 [INFO] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/ImarisHDFReader.java: Some input files use unchecked or unsafe operations.
#14 314.5 [INFO] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/ImarisHDFReader.java: Recompile with -Xlint:unchecked for details.
#14 314.5 [INFO] 
#14 314.5 [INFO] --- maven-resources-plugin:3.1.0:testResources (default-testResources) @ formats-gpl ---
#14 314.5 [INFO] Using 'UTF-8' encoding to copy filtered resources.
#14 314.5 [INFO] Copying 24 resources
#14 314.5 [INFO] 
#14 314.5 [INFO] --- maven-compiler-plugin:3.7.0:testCompile (default-testCompile) @ formats-gpl ---
#14 314.5 [INFO] Changes detected - recompiling the module!
#14 314.5 [INFO] Compiling 23 source files to /bio-formats-build/bioformats/components/formats-gpl/target/test-classes
#14 314.7 [INFO] /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java: /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java uses unchecked or unsafe operations.
#14 314.7 [INFO] /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java: Recompile with -Xlint:unchecked for details.
#14 314.7 [INFO] 
#14 314.7 [INFO] --- maven-surefire-plugin:2.22.0:test (default-test) @ formats-gpl ---
#14 314.7 [INFO] 
#14 314.7 [INFO] -------------------------------------------------------
#14 314.7 [INFO]  T E S T S
#14 314.7 [INFO] -------------------------------------------------------
#14 314.9 [INFO] Running TestSuite
#14 316.1 2024-10-31 00:17:02,024 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@3add81c4 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 316.1 2024-10-31 00:17:02,027 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@1f2d2181 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 316.2 2024-10-31 00:17:02,079 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@7ba63fe5 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 316.2 2024-10-31 00:17:02,079 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@73386d72 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 316.2 2024-10-31 00:17:02,127 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@44f9779c reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 316.2 2024-10-31 00:17:02,127 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@5f233b26 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 316.3 2024-10-31 00:17:02,175 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@5339bbad reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 316.3 2024-10-31 00:17:02,175 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@3935e9a8 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 316.3 2024-10-31 00:17:02,220 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@2f4919b0 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 316.3 2024-10-31 00:17:02,220 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@a8a8b75 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 316.4 2024-10-31 00:17:02,283 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@2e1792e7 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 316.4 2024-10-31 00:17:02,284 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@3aefae67 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 316.4 2024-10-31 00:17:02,331 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@72ba28ee reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 316.4 2024-10-31 00:17:02,331 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@2e3a5237 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 316.5 2024-10-31 00:17:02,373 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@72ed9aad reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 316.5 2024-10-31 00:17:02,373 [main] WARN  ome.xml.model.OMEModelImpl - ome.xml.model.Laser@1d207fad reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 316.7 [INFO] Tests run: 99, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.804 s - in TestSuite
#14 317.0 [INFO] 
#14 317.0 [INFO] Results:
#14 317.0 [INFO] 
#14 317.0 [INFO] Tests run: 99, Failures: 0, Errors: 0, Skipped: 0
#14 317.0 [INFO] 
#14 317.0 [INFO] 
#14 317.0 [INFO] --- maven-surefire-plugin:2.22.0:test (missing-mdb-test) @ formats-gpl ---
#14 317.0 [INFO] 
#14 317.0 [INFO] -------------------------------------------------------
#14 317.0 [INFO]  T E S T S
#14 317.0 [INFO] -------------------------------------------------------
#14 317.2 [INFO] Running TestSuite
#14 317.6 [INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.425 s - in TestSuite
#14 317.9 [INFO] 
#14 317.9 [INFO] Results:
#14 317.9 [INFO] 
#14 317.9 [INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0
#14 317.9 [INFO] 
#14 317.9 [INFO] 
#14 317.9 [INFO] --- maven-surefire-plugin:2.22.0:test (missing-poi-test) @ formats-gpl ---
#14 317.9 [INFO] 
#14 317.9 [INFO] -------------------------------------------------------
#14 317.9 [INFO]  T E S T S
#14 317.9 [INFO] -------------------------------------------------------
#14 318.1 [INFO] Running TestSuite
#14 318.5 [INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.406 s - in TestSuite
#14 318.8 [INFO] 
#14 318.8 [INFO] Results:
#14 318.8 [INFO] 
#14 318.8 [INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0
#14 318.8 [INFO] 
#14 318.8 [INFO] 
#14 318.8 [INFO] --- maven-surefire-plugin:2.22.0:test (missing-netcdf-test) @ formats-gpl ---
#14 318.8 [INFO] 
#14 318.8 [INFO] -------------------------------------------------------
#14 318.8 [INFO]  T E S T S
#14 318.8 [INFO] -------------------------------------------------------
#14 319.0 [INFO] Running TestSuite
#14 319.4 [INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.409 s - in TestSuite
#14 319.7 [INFO] 
#14 319.7 [INFO] Results:
#14 319.7 [INFO] 
#14 319.7 [INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0
#14 319.7 [INFO] 
#14 319.7 [INFO] 
#14 319.7 [INFO] --- maven-jar-plugin:3.1.0:jar (default-jar) @ formats-gpl ---
#14 319.8 [INFO] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.1.0-SNAPSHOT.jar
#14 319.8 [INFO] 
#14 319.8 [INFO] >>> maven-source-plugin:3.0.1:jar (default) > generate-sources @ formats-gpl >>>
#14 319.8 [INFO] 
#14 319.8 [INFO] --- maven-enforcer-plugin:3.0.0-M2:enforce (enforce-versions) @ formats-gpl ---
#14 319.8 [INFO] 
#14 319.8 [INFO] --- buildnumber-maven-plugin:1.4:create (default) @ formats-gpl ---
#14 319.8 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 319.8 [INFO] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 319.8 [INFO] Storing buildNumber: 93f1e5f58e3068adc8fd6b393388e1c1245dce8e at timestamp: 1730333825701
#14 319.8 [WARNING] Cannot get the branch information from the git repository: 
#14 319.8 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 319.8 
#14 319.8 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 319.8 [INFO] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 319.8 [INFO] Storing buildScmBranch: UNKNOWN
#14 319.8 [INFO] 
#14 319.8 [INFO] <<< maven-source-plugin:3.0.1:jar (default) < generate-sources @ formats-gpl <<<
#14 319.8 [INFO] 
#14 319.8 [INFO] 
#14 319.8 [INFO] --- maven-source-plugin:3.0.1:jar (default) @ formats-gpl ---
#14 319.8 [INFO] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.1.0-SNAPSHOT-sources.jar
#14 319.9 [INFO] 
#14 319.9 [INFO] --- maven-jar-plugin:3.1.0:test-jar (default) @ formats-gpl ---
#14 319.9 [INFO] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.1.0-SNAPSHOT-tests.jar
#14 319.9 [INFO] 
#14 319.9 [INFO] --- maven-install-plugin:2.5.2:install (default-install) @ formats-gpl ---
#14 319.9 [INFO] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.1.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/formats-gpl-8.1.0-SNAPSHOT.jar
#14 319.9 [INFO] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/formats-gpl-8.1.0-SNAPSHOT.pom
#14 319.9 [INFO] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.1.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/formats-gpl-8.1.0-SNAPSHOT-sources.jar
#14 319.9 [INFO] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.1.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/formats-gpl-8.1.0-SNAPSHOT-tests.jar
#14 319.9 [INFO] 
#14 319.9 [INFO] ----------------------< ome:bio-formats_plugins >-----------------------
#14 319.9 [INFO] Building Bio-Formats Plugins for ImageJ 8.1.0-SNAPSHOT           [18/25]
#14 319.9 [INFO] --------------------------------[ jar ]---------------------------------
#14 319.9 Downloading from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.pom
#14 319.9 Progress (1): 4.1/7.9 kB
Progress (1): 7.9 kB    
                    
Downloaded from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.pom (7.9 kB at 272 kB/s)
#14 319.9 Downloading from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.jar
#14 320.1 Progress (1): 0/2.5 MB
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Downloaded from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.jar (2.5 MB at 8.9 MB/s)
#14 320.2 [INFO] 
#14 320.2 [INFO] --- maven-clean-plugin:3.1.0:clean (default-clean) @ bio-formats_plugins ---
#14 320.2 [INFO] 
#14 320.2 [INFO] --- maven-enforcer-plugin:3.0.0-M2:enforce (enforce-versions) @ bio-formats_plugins ---
#14 320.2 [INFO] 
#14 320.2 [INFO] --- buildnumber-maven-plugin:1.4:create (default) @ bio-formats_plugins ---
#14 320.2 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 320.2 [INFO] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 320.2 [INFO] Storing buildNumber: 93f1e5f58e3068adc8fd6b393388e1c1245dce8e at timestamp: 1730333826134
#14 320.2 [WARNING] Cannot get the branch information from the git repository: 
#14 320.2 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 320.2 
#14 320.2 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 320.2 [INFO] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 320.2 [INFO] Storing buildScmBranch: UNKNOWN
#14 320.2 [INFO] 
#14 320.2 [INFO] --- maven-resources-plugin:3.1.0:resources (default-resources) @ bio-formats_plugins ---
#14 320.2 [INFO] Using 'UTF-8' encoding to copy filtered resources.
#14 320.2 [INFO] Copying 3 resources
#14 320.2 [INFO] skip non existing resourceDirectory /bio-formats-build/bioformats/components/bio-formats-plugins/lib
#14 320.2 [INFO] Copying 0 resource
#14 320.2 [INFO] Copying 0 resource
#14 320.2 [INFO] 
#14 320.2 [INFO] --- maven-compiler-plugin:3.7.0:compile (default-compile) @ bio-formats_plugins ---
#14 320.2 [INFO] Changes detected - recompiling the module!
#14 320.2 [INFO] Compiling 70 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/target/classes
#14 320.8 [INFO] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java: Some input files use or override a deprecated API.
#14 320.8 [INFO] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java: Recompile with -Xlint:deprecation for details.
#14 320.8 [INFO] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#14 320.8 [INFO] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java: Recompile with -Xlint:unchecked for details.
#14 320.8 [INFO] 
#14 320.8 [INFO] --- maven-resources-plugin:3.1.0:testResources (default-testResources) @ bio-formats_plugins ---
#14 320.8 [INFO] Using 'UTF-8' encoding to copy filtered resources.
#14 320.8 [INFO] Copying 1 resource
#14 320.8 [INFO] 
#14 320.8 [INFO] --- maven-compiler-plugin:3.7.0:testCompile (default-testCompile) @ bio-formats_plugins ---
#14 320.8 [INFO] Changes detected - recompiling the module!
#14 320.8 [INFO] Compiling 3 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/target/test-classes
#14 321.0 [INFO] 
#14 321.0 [INFO] --- maven-surefire-plugin:2.22.0:test (default-test) @ bio-formats_plugins ---
#14 321.0 [INFO] 
#14 321.0 [INFO] -------------------------------------------------------
#14 321.0 [INFO]  T E S T S
#14 321.0 [INFO] -------------------------------------------------------
#14 321.2 [INFO] Running TestSuite
#14 322.4 Warning: Data has too many channels for Colorized color mode
#14 322.5 Warning: Data has too many channels for Colorized color mode
#14 322.5 Warning: Data has too many channels for Colorized color mode
#14 322.6 Warning: Data has too many channels for Colorized color mode
#14 322.6 Warning: Data has too many channels for Colorized color mode
#14 322.7 Warning: Data has too many channels for Colorized color mode
#14 322.7 Warning: Data has too many channels for Colorized color mode
#14 322.7 Warning: Data has too many channels for Colorized color mode
#14 322.8 Warning: Data has too many channels for Composite color mode
#14 322.8 Warning: Data has too many channels for Composite color mode
#14 323.1 Warning: Data has too many channels for Composite color mode
#14 323.1 Warning: Data has too many channels for Composite color mode
#14 323.1 Warning: Data has too many channels for Composite color mode
#14 323.1 Warning: Data has too many channels for Composite color mode
#14 323.1 Warning: Data has too many channels for Composite color mode
#14 323.1 Warning: Data has too many channels for Composite color mode
#14 323.2 Warning: Data has too many channels for Composite color mode
#14 323.2 Warning: Data has too many channels for Composite color mode
#14 323.2 Warning: Data has too many channels for Composite color mode
#14 323.2 Warning: Data has too many channels for Composite color mode
#14 323.2 Warning: Data has too many channels for Composite color mode
#14 323.2 Warning: Data has too many channels for Composite color mode
#14 323.2 Warning: Data has too many channels for Composite color mode
#14 323.2 Warning: Data has too many channels for Composite color mode
#14 323.2 Warning: Data has too many channels for Composite color mode
#14 323.2 Warning: Data has too many channels for Composite color mode
#14 323.5 Warning: Data has too many channels for Composite color mode
#14 323.5 Warning: Data has too many channels for Composite color mode
#14 323.5 Warning: Data has too many channels for Composite color mode
#14 323.5 Warning: Data has too many channels for Composite color mode
#14 323.5 Warning: Data has too many channels for Composite color mode
#14 323.5 Warning: Data has too many channels for Composite color mode
#14 323.6 Warning: Data has too many channels for Composite color mode
#14 323.6 Warning: Data has too many channels for Composite color mode
#14 323.6 Warning: Data has too many channels for Composite color mode
#14 323.6 Warning: Data has too many channels for Composite color mode
#14 323.6 Warning: Data has too many channels for Composite color mode
#14 323.6 Warning: Data has too many channels for Composite color mode
#14 323.6 Warning: Data has too many channels for Composite color mode
#14 323.6 Warning: Data has too many channels for Composite color mode
#14 323.6 Warning: Data has too many channels for Composite color mode
#14 323.6 Warning: Data has too many channels for Composite color mode
#14 323.7 Warning: Data has too many channels for Composite color mode
#14 323.7 Warning: Data has too many channels for Composite color mode
#14 324.0 Warning: Data has too many channels for Composite color mode
#14 324.0 Warning: Data has too many channels for Composite color mode
#14 324.0 Warning: Data has too many channels for Composite color mode
#14 324.0 Warning: Data has too many channels for Composite color mode
#14 324.0 Warning: Data has too many channels for Composite color mode
#14 324.0 Warning: Data has too many channels for Composite color mode
#14 324.0 Warning: Data has too many channels for Composite color mode
#14 324.0 Warning: Data has too many channels for Composite color mode
#14 324.0 Warning: Data has too many channels for Composite color mode
#14 324.1 Warning: Data has too many channels for Composite color mode
#14 324.1 Warning: Data has too many channels for Composite color mode
#14 324.1 Warning: Data has too many channels for Composite color mode
#14 324.1 Warning: Data has too many channels for Composite color mode
#14 324.1 Warning: Data has too many channels for Composite color mode
#14 324.1 Warning: Data has too many channels for Composite color mode
#14 324.1 Warning: Data has too many channels for Composite color mode
#14 324.4 Warning: Data has too many channels for Composite color mode
#14 324.5 Warning: Data has too many channels for Composite color mode
#14 324.5 Warning: Data has too many channels for Composite color mode
#14 324.5 Warning: Data has too many channels for Composite color mode
#14 324.5 Warning: Data has too many channels for Composite color mode
#14 324.5 Warning: Data has too many channels for Composite color mode
#14 324.5 Warning: Data has too many channels for Composite color mode
#14 324.5 Warning: Data has too many channels for Composite color mode
#14 324.5 Warning: Data has too many channels for Composite color mode
#14 324.5 Warning: Data has too many channels for Composite color mode
#14 324.5 Warning: Data has too many channels for Composite color mode
#14 324.6 Warning: Data has too many channels for Composite color mode
#14 324.6 Warning: Data has too many channels for Composite color mode
#14 324.6 Warning: Data has too many channels for Composite color mode
#14 324.6 Warning: Data has too many channels for Composite color mode
#14 324.6 Warning: Data has too many channels for Composite color mode
#14 324.6 Warning: Data has too many channels for Custom color mode
#14 324.6 Warning: Data has too many channels for Custom color mode
#14 324.7 Warning: Data has too many channels for Custom color mode
#14 324.7 Warning: Data has too many channels for Custom color mode
#14 324.7 Warning: Data has too many channels for Custom color mode
#14 324.7 Warning: Data has too many channels for Custom color mode
#14 324.8 Warning: Data has too many channels for Custom color mode
#14 324.8 Warning: Data has too many channels for Custom color mode
#14 324.8 Warning: Data has too many channels for Default color mode
#14 324.8 Warning: Data has too many channels for Default color mode
#14 324.8 Warning: Data has too many channels for Default color mode
#14 324.9 Warning: Data has too many channels for Default color mode
#14 324.9 Warning: Data has too many channels for Default color mode
#14 324.9 Warning: Data has too many channels for Default color mode
#14 324.9 Warning: Data has too many channels for Default color mode
#14 324.9 Warning: Data has too many channels for Default color mode
#14 325.0 Warning: Data has too many channels for Default color mode
#14 325.0 Warning: Data has too many channels for Default color mode
#14 325.0 Warning: Data has too many channels for Default color mode
#14 325.0 Warning: Data has too many channels for Default color mode
#14 325.1 Warning: Data has too many channels for Default color mode
#14 325.1 Warning: Data has too many channels for Default color mode
#14 325.1 Warning: Data has too many channels for Default color mode
#14 325.1 Warning: Data has too many channels for Default color mode
#14 325.2 Warning: Data has too many channels for Grayscale color mode
#14 325.2 Warning: Data has too many channels for Grayscale color mode
#14 325.2 Warning: Data has too many channels for Grayscale color mode
#14 325.2 Warning: Data has too many channels for Grayscale color mode
#14 325.2 Warning: Data has too many channels for Grayscale color mode
#14 325.3 Warning: Data has too many channels for Grayscale color mode
#14 325.3 Warning: Data has too many channels for Grayscale color mode
#14 325.3 Warning: Data has too many channels for Grayscale color mode
#14 325.4 Warning: Data has too many channels for Colorized color mode
#14 325.4 Warning: Data has too many channels for Colorized color mode
#14 325.4 Warning: Data has too many channels for Colorized color mode
#14 326.0 Warning: Data has too many channels for Default color mode
#14 326.2 [INFO] Tests run: 30, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 5.023 s - in TestSuite
#14 326.5 [INFO] 
#14 326.5 [INFO] Results:
#14 326.5 [INFO] 
#14 326.5 [INFO] Tests run: 30, Failures: 0, Errors: 0, Skipped: 0
#14 326.5 [INFO] 
#14 326.5 [INFO] 
#14 326.5 [INFO] --- maven-jar-plugin:3.1.0:jar (default-jar) @ bio-formats_plugins ---
#14 326.5 [INFO] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.1.0-SNAPSHOT.jar
#14 326.5 [INFO] 
#14 326.5 [INFO] >>> maven-source-plugin:3.0.1:jar (default) > generate-sources @ bio-formats_plugins >>>
#14 326.5 [INFO] 
#14 326.5 [INFO] --- maven-enforcer-plugin:3.0.0-M2:enforce (enforce-versions) @ bio-formats_plugins ---
#14 326.5 [INFO] 
#14 326.5 [INFO] --- buildnumber-maven-plugin:1.4:create (default) @ bio-formats_plugins ---
#14 326.5 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 326.5 [INFO] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 326.5 [INFO] Storing buildNumber: 93f1e5f58e3068adc8fd6b393388e1c1245dce8e at timestamp: 1730333832457
#14 326.5 [WARNING] Cannot get the branch information from the git repository: 
#14 326.5 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 326.5 
#14 326.5 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 326.5 [INFO] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 326.6 [INFO] Storing buildScmBranch: UNKNOWN
#14 326.6 [INFO] 
#14 326.6 [INFO] <<< maven-source-plugin:3.0.1:jar (default) < generate-sources @ bio-formats_plugins <<<
#14 326.6 [INFO] 
#14 326.6 [INFO] 
#14 326.6 [INFO] --- maven-source-plugin:3.0.1:jar (default) @ bio-formats_plugins ---
#14 326.6 [INFO] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.1.0-SNAPSHOT-sources.jar
#14 326.6 [INFO] 
#14 326.6 [INFO] --- maven-jar-plugin:3.1.0:test-jar (default) @ bio-formats_plugins ---
#14 326.6 [INFO] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.1.0-SNAPSHOT-tests.jar
#14 326.6 [INFO] 
#14 326.6 [INFO] --- maven-install-plugin:2.5.2:install (default-install) @ bio-formats_plugins ---
#14 326.6 [INFO] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.1.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/bio-formats_plugins-8.1.0-SNAPSHOT.jar
#14 326.6 [INFO] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/bio-formats_plugins-8.1.0-SNAPSHOT.pom
#14 326.6 [INFO] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.1.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/bio-formats_plugins-8.1.0-SNAPSHOT-sources.jar
#14 326.6 [INFO] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.1.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/bio-formats_plugins-8.1.0-SNAPSHOT-tests.jar
#14 326.6 [INFO] 
#14 326.6 [INFO] -----------------------< ome:bio-formats-tools >------------------------
#14 326.6 [INFO] Building Bio-Formats command line tools 8.1.0-SNAPSHOT           [19/25]
#14 326.6 [INFO] --------------------------------[ jar ]---------------------------------
#14 326.6 [INFO] 
#14 326.6 [INFO] --- maven-clean-plugin:3.1.0:clean (default-clean) @ bio-formats-tools ---
#14 326.6 [INFO] 
#14 326.6 [INFO] --- maven-enforcer-plugin:3.0.0-M2:enforce (enforce-versions) @ bio-formats-tools ---
#14 326.6 [INFO] 
#14 326.6 [INFO] --- buildnumber-maven-plugin:1.4:create (default) @ bio-formats-tools ---
#14 326.6 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 326.6 [INFO] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 326.6 [INFO] Storing buildNumber: 93f1e5f58e3068adc8fd6b393388e1c1245dce8e at timestamp: 1730333832530
#14 326.6 [WARNING] Cannot get the branch information from the git repository: 
#14 326.6 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 326.6 
#14 326.6 [INFO] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 326.6 [INFO] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 326.6 [INFO] Storing buildScmBranch: UNKNOWN
#14 326.6 [INFO] 
#14 326.6 [INFO] --- maven-resources-plugin:3.1.0
#14 326.6 [output clipped, log limit 2MiB reached]
#14 497.1 SLF4J: No SLF4J providers were found.
#14 497.1 SLF4J: Defaulting to no-operation (NOP) logger implementation
#14 497.1 SLF4J: See https://www.slf4j.org/codes.html#noProviders for further details.
#14 497.6 WARNING: A Java agent has been loaded dynamically (/home/build/.m2/repository/net/bytebuddy/byte-buddy-agent/1.10.19/byte-buddy-agent-1.10.19.jar)
#14 497.6 WARNING: If a serviceability tool is in use, please run with -XX:+EnableDynamicAgentLoading to hide this warning
#14 497.6 WARNING: If a serviceability tool is not in use, please run with -Djdk.instrument.traceUsage for more information
#14 497.6 WARNING: Dynamic loading of agents will be disallowed by default in a future release
#14 DONE 507.3s

#15 [11/13] WORKDIR /bio-formats-build/bioformats
#15 DONE 0.0s

#16 [12/13] RUN ant jars tools
#16 3.198 Buildfile: /bio-formats-build/bioformats/build.xml
#16 4.078      [echo] isSnapshot = true
#16 4.192 
#16 4.192 copy-jars:
#16 4.192 
#16 4.192 deps-formats-api:
#16 4.281      [echo] isSnapshot = true
#16 4.336 
#16 4.336 install-pom:
#16 4.531 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.1.0-SNAPSHOT/pom-bio-formats-8.1.0-SNAPSHOT.pom
#16 4.581 [resolver:install] Installing ome:pom-bio-formats:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 4.586 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 4.587 
#16 4.587 jar-formats-api:
#16 4.706      [echo] isSnapshot = true
#16 4.868 
#16 4.868 init-title:
#16 4.868      [echo] ----------=========== formats-api ===========----------
#16 4.868 
#16 4.868 init-timestamp:
#16 4.875 
#16 4.875 init:
#16 4.875 
#16 4.875 copy-resources:
#16 4.876     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-api/build/classes
#16 4.889      [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 4.891 
#16 4.891 compile:
#16 5.072 [resolver:resolve] Resolving artifacts
#16 5.099     [javac] Compiling 53 source files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 5.390     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 5.390     [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 5.390     [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 5.390     [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 6.091     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:52: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 6.091     [javac] import loci.common.ReflectedUniverse;
#16 6.091     [javac]                   ^
#16 6.291     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:150: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 6.291     [javac]     int currentIndex = r.getCoreIndex();
#16 6.291     [javac]                         ^
#16 6.292     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:151: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 6.292     [javac]     r.setCoreIndex(coreIndex);
#16 6.292     [javac]      ^
#16 6.292     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:179: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 6.292     [javac]     r.setCoreIndex(currentIndex);
#16 6.292     [javac]      ^
#16 6.392     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1442: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 6.392     [javac]   public void setCoreIndex(int no) {
#16 6.392     [javac]               ^
#16 6.392     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1436: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 6.392     [javac]   public int getCoreIndex() {
#16 6.392     [javac]              ^
#16 6.392     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1362: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 6.392     [javac]   public int coreIndexToSeries(int index)
#16 6.393     [javac]              ^
#16 6.393     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1330: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 6.393     [javac]   public int seriesToCoreIndex(int series)
#16 6.393     [javac]              ^
#16 6.393     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1208: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 6.393     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#16 6.393     [javac]                             ^
#16 6.493     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:132: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 6.493     [javac]     if (nativeReaderInitialized) nativeReader.setCoreIndex(no);
#16 6.493     [javac]                                              ^
#16 6.493     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:133: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 6.493     [javac]     if (legacyReaderInitialized) legacyReader.setCoreIndex(no);
#16 6.494     [javac]                                              ^
#16 6.494     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:309: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 6.494     [javac]       core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 6.494     [javac]                                                      ^
#16 6.494     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:314: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 6.494     [javac]       core = new ArrayList<CoreMetadata>(legacyReader.getCoreMetadataList());
#16 6.494     [javac]                                                      ^
#16 6.594     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:266: warning: [deprecation] URL(String) in URL has been deprecated
#16 6.594     [javac]       Manifest manifest = new Manifest(new URL(manifestPath).openStream());
#16 6.594     [javac]                                        ^
#16 6.594     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 6.594     [javac]     ReflectedUniverse r = new ReflectedUniverse();
#16 6.594     [javac]     ^
#16 6.594     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 6.594     [javac]     ReflectedUniverse r = new ReflectedUniverse();
#16 6.595     [javac]                               ^
#16 6.695     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:773: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 6.695     [javac]   public void setCoreIndex(int no) {
#16 6.695     [javac]               ^
#16 6.695     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:767: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 6.695     [javac]   public int getCoreIndex() {
#16 6.695     [javac]              ^
#16 6.695     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:783: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 6.695     [javac]   public int coreIndexToSeries(int index) {
#16 6.695     [javac]              ^
#16 6.695     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:778: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 6.695     [javac]   public int seriesToCoreIndex(int series) {
#16 6.695     [javac]              ^
#16 6.695     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:587: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 6.696     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#16 6.696     [javac]                             ^
#16 6.696     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:588: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 6.696     [javac]     return getReader().getCoreMetadataList();
#16 6.696     [javac]                       ^
#16 6.696     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:768: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 6.696     [javac]     return getReader().getCoreIndex();
#16 6.696     [javac]                       ^
#16 6.696     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:774: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 6.696     [javac]     getReader().setCoreIndex(no);
#16 6.696     [javac]                ^
#16 6.696     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:779: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 6.696     [javac]     return getReader().seriesToCoreIndex(series);
#16 6.696     [javac]                       ^
#16 6.696     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:784: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 6.696     [javac]     return getReader().coreIndexToSeries(index);
#16 6.696     [javac]                       ^
#16 6.796     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:629: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 6.797     [javac]   public void setCoreIndex(int no) {
#16 6.797     [javac]               ^
#16 6.797     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:624: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 6.797     [javac]   public int getCoreIndex() {
#16 6.797     [javac]              ^
#16 6.797     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:639: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 6.797     [javac]   public int coreIndexToSeries(int index) {
#16 6.797     [javac]              ^
#16 6.797     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:634: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 6.797     [javac]   public int seriesToCoreIndex(int series) {
#16 6.797     [javac]              ^
#16 6.797     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:537: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 6.797     [javac]   public List<CoreMetadata> getCoreMetadataList() {
#16 6.797     [javac]                             ^
#16 6.797     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:539: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 6.797     [javac]     List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 6.797     [javac]                                        ^
#16 6.797     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:625: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 6.797     [javac]     return reader.getCoreIndex();
#16 6.797     [javac]                  ^
#16 6.797     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:630: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 6.797     [javac]     reader.setCoreIndex(no);
#16 6.797     [javac]           ^
#16 6.797     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:635: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 6.797     [javac]     return reader.seriesToCoreIndex(series);
#16 6.797     [javac]                  ^
#16 6.798     [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:640: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 6.798     [javac]     return reader.coreIndexToSeries(index);
#16 6.798     [javac]                  ^
#16 6.978     [javac] Note: Some input files use unchecked or unsafe operations.
#16 6.978     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 6.978     [javac] 40 warnings
#16 6.978 
#16 6.978 formats-api.jar:
#16 6.979     [mkdir] Created dir: /bio-formats-build/bioformats/artifacts
#16 7.004       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-api.jar
#16 7.036 [resolver:install] Using default POM (ome:formats-api:8.1.0-SNAPSHOT)
#16 7.040 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.1.0-SNAPSHOT/formats-api-8.1.0-SNAPSHOT.pom
#16 7.042 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.1.0-SNAPSHOT/formats-api-8.1.0-SNAPSHOT.jar
#16 7.043 [resolver:install] Installing ome:formats-api:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 7.045 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 7.046 
#16 7.046 deps-turbojpeg:
#16 7.046 
#16 7.046 jar-turbojpeg:
#16 7.144      [echo] isSnapshot = true
#16 7.304 
#16 7.304 init-title:
#16 7.304      [echo] ----------=========== turbojpeg ===========----------
#16 7.304 
#16 7.304 init-timestamp:
#16 7.304 
#16 7.304 init:
#16 7.304 
#16 7.304 copy-resources:
#16 7.305     [mkdir] Created dir: /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 7.306 
#16 7.306 compile:
#16 7.315 [resolver:resolve] Resolving artifacts
#16 7.318     [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 7.521     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 7.521     [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 7.521     [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 7.521     [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 8.222     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:449: warning: [removal] finalize() in Object has been deprecated and marked for removal
#16 8.222     [javac]   protected void finalize() throws Throwable {
#16 8.222     [javac]                  ^
#16 8.222     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:455: warning: [removal] finalize() in Object has been deprecated and marked for removal
#16 8.222     [javac]       super.finalize();
#16 8.222     [javac]            ^
#16 8.222     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:504: warning: [removal] finalize() in Object has been deprecated and marked for removal
#16 8.222     [javac]   protected void finalize() throws Throwable {
#16 8.222     [javac]                  ^
#16 8.222     [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:510: warning: [removal] finalize() in Object has been deprecated and marked for removal
#16 8.222     [javac]       super.finalize();
#16 8.222     [javac]            ^
#16 8.222     [javac] 8 warnings
#16 8.243 
#16 8.243 jar:
#16 8.247       [jar] Building jar: /bio-formats-build/bioformats/artifacts/turbojpeg.jar
#16 8.434 [resolver:install] Using default POM (ome:turbojpeg:8.1.0-SNAPSHOT)
#16 8.441 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.1.0-SNAPSHOT/turbojpeg-8.1.0-SNAPSHOT.pom
#16 8.443 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.1.0-SNAPSHOT/turbojpeg-8.1.0-SNAPSHOT.jar
#16 8.445 [resolver:install] Installing ome:turbojpeg:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 8.449 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 8.450 
#16 8.450 deps-formats-bsd:
#16 8.450 
#16 8.450 jar-formats-bsd:
#16 8.572      [echo] isSnapshot = true
#16 8.717 
#16 8.717 init-title:
#16 8.718      [echo] ----------=========== formats-bsd ===========----------
#16 8.718 
#16 8.718 init-timestamp:
#16 8.718 
#16 8.718 init:
#16 8.718 
#16 8.718 copy-resources:
#16 8.718     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 8.721      [copy] Copying 1 file to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 8.722 
#16 8.722 compile:
#16 8.941 [resolver:resolve] Resolving artifacts
#16 8.972     [javac] Compiling 177 source files to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 9.181     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 9.181     [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 9.181     [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 9.181     [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 10.38     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:45: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 10.38     [javac] import loci.common.ReflectedUniverse;
#16 10.38     [javac]                   ^
#16 10.78     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:297: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.78     [javac]       core.size() != reader.getCoreMetadataList().size())
#16 10.78     [javac]                            ^
#16 10.78     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:301: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.78     [javac]       List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 10.78     [javac]                                          ^
#16 10.88     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:581: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.88     [javac]     int n = reader.getCoreMetadataList().size();
#16 10.88     [javac]                   ^
#16 10.88     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:602: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 10.88     [javac]     reader.setCoreIndex(coreIndex);
#16 10.88     [javac]           ^
#16 10.88     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:609: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.88     [javac]     int n = reader.getCoreMetadataList().size();
#16 10.88     [javac]                   ^
#16 10.88     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:620: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.88     [javac]     int n = reader.getCoreMetadataList().size();
#16 10.88     [javac]                   ^
#16 10.88     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:621: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 10.88     [javac]     if (n > 1 || noStitch) return reader.seriesToCoreIndex(series);
#16 10.88     [javac]                                         ^
#16 10.88     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:628: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.88     [javac]     int n = reader.getCoreMetadataList().size();
#16 10.88     [javac]                   ^
#16 10.88     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:629: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 10.88     [javac]     if (n > 1 || noStitch) return reader.coreIndexToSeries(index);
#16 10.88     [javac]                                         ^
#16 10.88     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:637: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.88     [javac]     int n = reader.getCoreMetadataList().size();
#16 10.89     [javac]                   ^
#16 10.89     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:638: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 10.89     [javac]     if (n > 1 || noStitch) reader.setCoreIndex(no);
#16 10.89     [javac]                                  ^
#16 10.89     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 10.89     [javac]     return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 10.89     [javac]                  ^
#16 10.89     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 10.89     [javac]     return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 10.89     [javac]                                              ^
#16 10.89     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:873: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.89     [javac]     return noStitch ? reader.getCoreMetadataList() : core;
#16 10.89     [javac]                             ^
#16 10.89     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1096: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.89     [javac]     if (reader.getCoreMetadataList().size() > 1 && externals.length > 1) {
#16 10.89     [javac]               ^
#16 10.89     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1121: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.89     [javac]       seriesCount = reader.getCoreMetadataList().size();
#16 10.89     [javac]                           ^
#16 10.89     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1211: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.89     [javac]       if (reader.getCoreMetadataList().size() == 1 && getSeriesCount() > 1) {
#16 10.89     [javac]                 ^
#16 10.89     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1229: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.89     [javac]     if (reader.getCoreMetadataList().size() > 1) return 0;
#16 10.89     [javac]               ^
#16 10.89     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1385: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.89     [javac]       r.setCoreIndex(reader.getCoreMetadataList().size() > 1 ? sno : 0);
#16 10.89     [javac]                            ^
#16 10.99     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/MinMaxCalculator.java:387: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.99     [javac]     int seriesCount = unwrap().getCoreMetadataList().size();
#16 10.99     [javac]                               ^
#16 11.09     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/UpgradeChecker.java:230: warning: [deprecation] URL(String) in URL has been deprecated
#16 11.09     [javac]       URLConnection conn = new URL(query.toString()).openConnection();
#16 11.09     [javac]                            ^
#16 11.09     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/UpgradeChecker.java:314: warning: [deprecation] URL(String) in URL has been deprecated
#16 11.09     [javac]       URL url = new URL(urlPath);
#16 11.09     [javac]                 ^
#16 11.19     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 11.19     [javac]     BitWriter out = new BitWriter();
#16 11.19     [javac]     ^
#16 11.19     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 11.19     [javac]     BitWriter out = new BitWriter();
#16 11.19     [javac]                         ^
#16 11.29     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/dicom/DicomTag.java:537: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 11.29     [javac]       return new Double(v);
#16 11.29     [javac]              ^
#16 11.89     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2106: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 11.89     [javac]     return FormatTools.getPhysicalSizeX(new Double(pixelSizeX), UNITS.MILLIMETER);
#16 11.89     [javac]                                         ^
#16 11.89     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2113: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 11.89     [javac]     return FormatTools.getPhysicalSizeY(new Double(pixelSizeY), UNITS.MILLIMETER);
#16 11.89     [javac]                                         ^
#16 11.89     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2120: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 11.89     [javac]     return FormatTools.getPhysicalSizeZ(new Double(pixelSizeZ), UNITS.MILLIMETER);
#16 11.89     [javac]                                         ^
#16 11.99     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/ICSReader.java:1142: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 11.99     [javac]                channelNames.put(new Integer(channelNames.size()), value);
#16 11.99     [javac]                                 ^
#16 12.19     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/OMETiffReader.java:618: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 12.19     [javac]       OMETiffCoreMetadata baseCore = new OMETiffCoreMetadata(reader.getCoreMetadataList().get(0));
#16 12.19     [javac]                                                                    ^
#16 12.29     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/PGMReader.java:158: warning: [deprecation] StreamTokenizer(InputStream) in StreamTokenizer has been deprecated
#16 12.29     [javac]     StreamTokenizer st = new StreamTokenizer(in);
#16 12.29     [javac]                          ^
#16 12.39     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffDelegateReader.java:95: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 12.39     [javac]     core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 12.39     [javac]                                                    ^
#16 12.39     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:74: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 12.39     [javac]   protected ReflectedUniverse r;
#16 12.39     [javac]             ^
#16 12.39     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:103: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 12.39     [javac]       r = new ReflectedUniverse();
#16 12.39     [javac]               ^
#16 12.39     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1043: warning: [deprecation] NM in UNITS has been deprecated
#16 12.39     [javac]           wavelength.value = new float[] {wave == null ? 1f : wave.value(UNITS.NM).floatValue()};
#16 12.39     [javac]                                                                               ^
#16 12.39     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1075: warning: [deprecation] MM in UNITS has been deprecated
#16 12.39     [javac]           sliceThickness.value = padString(String.valueOf(physicalZ.value(UNITS.MM)));
#16 12.39     [javac]                                                                                ^
#16 12.39     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1088: warning: [deprecation] MM in UNITS has been deprecated
#16 12.39     [javac]         String px = physicalX == null ? "1" : String.valueOf(physicalX.value(UNITS.MM));
#16 12.39     [javac]                                                                                   ^
#16 12.39     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1089: warning: [deprecation] MM in UNITS has been deprecated
#16 12.39     [javac]         String py = physicalY == null ? "1" : String.valueOf(physicalY.value(UNITS.MM));
#16 12.39     [javac]                                                                                   ^
#16 12.39     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1108: warning: [deprecation] MM in UNITS has been deprecated
#16 12.39     [javac]         volumeWidth.value = new float[] {physicalX == null ? 1f : physicalX.value(UNITS.MM).floatValue() * width};
#16 12.39     [javac]                                                                                        ^
#16 12.39     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1112: warning: [deprecation] MM in UNITS has been deprecated
#16 12.39     [javac]         volumeHeight.value = new float[] {physicalY == null ? 1f : physicalY.value(UNITS.MM).floatValue() * height};
#16 12.39     [javac]                                                                                         ^
#16 12.39     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1118: warning: [deprecation] MM in UNITS has been deprecated
#16 12.39     [javac]         volumeDepth.value = new float[] {physicalZ == null ? 1f : physicalZ.value(UNITS.MM).floatValue() * sizeZ};
#16 12.39     [javac]                                                                                        ^
#16 12.39     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1166: warning: [deprecation] MM in UNITS has been deprecated
#16 12.39     [javac]             offsetX.value = padString(physicalX == null ? "0" : padString(String.valueOf(physicalX.value(UNITS.MM).floatValue() * width)));
#16 12.39     [javac]                                                                                                               ^
#16 12.39     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1170: warning: [deprecation] MM in UNITS has been deprecated
#16 12.39     [javac]             offsetY.value = padString(physicalY == null ? "0" : padString(String.valueOf(physicalY.value(UNITS.MM).floatValue() * height)));
#16 12.39     [javac]                                                                                                               ^
#16 12.49     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:223: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 12.49     [javac]       ifd.put(new Integer(IFD.TILE_WIDTH), new Long(getTileSizeX()));
#16 12.49     [javac]               ^
#16 12.49     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:223: warning: [removal] Long(long) in Long has been deprecated and marked for removal
#16 12.49     [javac]       ifd.put(new Integer(IFD.TILE_WIDTH), new Long(getTileSizeX()));
#16 12.49     [javac]                                            ^
#16 12.49     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:224: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 12.49     [javac]       ifd.put(new Integer(IFD.TILE_LENGTH), new Long(getTileSizeY()));
#16 12.49     [javac]               ^
#16 12.49     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:224: warning: [removal] Long(long) in Long has been deprecated and marked for removal
#16 12.49     [javac]       ifd.put(new Integer(IFD.TILE_LENGTH), new Long(getTileSizeY()));
#16 12.49     [javac]                                             ^
#16 12.59     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/services/JPEGTurboServiceImpl.java:110: warning: [deprecation] loadNativeLibrary(Class<?>,String) in NativeLibraryUtil has been deprecated
#16 12.59     [javac]       libraryLoaded = NativeLibraryUtil.loadNativeLibrary(TJ.class, "turbojpeg");
#16 12.59     [javac]                                        ^
#16 12.59     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:320: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 12.59     [javac]         doubleResult[i] = new Double(result.get(i).doubleValue());
#16 12.59     [javac]                           ^
#16 12.59     [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:342: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 12.59     [javac]       result[i] = new Double(readNumber().doubleValue());
#16 12.59     [javac]                   ^
#16 12.59     [javac] Note: Some input files use unchecked or unsafe operations.
#16 12.59     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 12.59     [javac] 55 warnings
#16 12.64 
#16 12.64 formats-bsd.jar:
#16 12.65       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-bsd.jar
#16 12.77 [resolver:install] Using default POM (ome:formats-bsd:8.1.0-SNAPSHOT)
#16 12.77 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.1.0-SNAPSHOT/formats-bsd-8.1.0-SNAPSHOT.pom
#16 12.82 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.1.0-SNAPSHOT/formats-bsd-8.1.0-SNAPSHOT.jar
#16 12.82 [resolver:install] Installing ome:formats-bsd:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 12.82 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 12.82 
#16 12.82 deps-formats-gpl:
#16 12.82 
#16 12.82 jar-formats-gpl:
#16 12.92      [echo] isSnapshot = true
#16 13.06 
#16 13.06 init-title:
#16 13.06      [echo] ----------=========== formats-gpl ===========----------
#16 13.06 
#16 13.06 init-timestamp:
#16 13.06 
#16 13.06 init:
#16 13.06 
#16 13.06 copy-resources:
#16 13.06     [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 13.06      [copy] Copying 1 file to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 13.07 
#16 13.07 compile:
#16 13.43 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom
#16 13.75 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom
#16 13.77 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom (0 B at 0.0 KB/sec)
#16 13.79 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom
#16 13.80 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom
#16 13.81 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom (0 B at 0.0 KB/sec)
#16 13.88 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom
#16 13.90 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom
#16 13.90 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom (0 B at 0.0 KB/sec)
#16 13.95 [resolver:resolve] Resolving artifacts
#16 13.96 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#16 13.96 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
#16 14.00 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#16 14.00 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
#16 14.00 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar (0 B at 0.0 KB/sec)
#16 14.01 [resolver:resolve] Downloaded https://artifacts.openmicroscopy.org/artifactory/maven/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar (0 B at 0.0 KB/sec)
#16 14.02     [javac] Compiling 173 source files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 14.23     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 14.23     [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 14.23     [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 14.23     [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 15.53     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:50: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 15.53     [javac] import loci.formats.codec.BitWriter;
#16 15.53     [javac]                          ^
#16 15.53     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:43: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 15.53     [javac] import loci.formats.codec.BitWriter;
#16 15.53     [javac]                          ^
#16 17.54     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/LeicaReader.java:1321: warning: non-varargs call of varargs method with inexact argument type for last parameter;
#16 17.54     [javac]       LOGGER.trace("Parsing tokens: {}", tokens);
#16 17.54     [javac]                                          ^
#16 17.54     [javac]   cast to Object for a varargs call
#16 17.54     [javac]   cast to Object[] for a non-varargs call and to suppress this warning
#16 17.64     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1257: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 17.64     [javac]     BitWriter bits = null;
#16 17.64     [javac]     ^
#16 17.64     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1259: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 17.64     [javac]       bits = new BitWriter(planes[index].length / 8);
#16 17.64     [javac]                  ^
#16 17.94     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/OlympusTileReader.java:196: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 17.94     [javac]     CoreMetadata ms = new CoreMetadata(helperReader.getCoreMetadataList().get(0));
#16 17.94     [javac]                                                    ^
#16 18.34     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 18.34     [javac]     BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 18.34     [javac]     ^
#16 18.34     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 18.34     [javac]     BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 18.34     [javac]                          ^
#16 18.64     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:169: warning: [deprecation] findVariable(String) in Group has been deprecated
#16 18.64     [javac]     Variable variable = group.findVariable(variableName);
#16 18.64     [javac]                              ^
#16 18.64     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:196: warning: [deprecation] findVariable(String) in Group has been deprecated
#16 18.64     [javac]     Variable variable = group.findVariable(variableName);
#16 18.64     [javac]                              ^
#16 18.64     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:199: warning: [deprecation] getAttributes() in Variable has been deprecated
#16 18.64     [javac]       List<Attribute> attributes = variable.getAttributes();
#16 18.64     [javac]                                            ^
#16 18.64     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:237: warning: [deprecation] getName() in CDMNode has been deprecated
#16 18.64     [javac]       String groupName = group.getName();
#16 18.64     [javac]                               ^
#16 18.64     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:238: warning: [deprecation] getAttributes() in Group has been deprecated
#16 18.64     [javac]       List<Attribute> attributes = group.getAttributes();
#16 18.64     [javac]                                         ^
#16 18.64     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:246: warning: [deprecation] getName() in CDMNode has been deprecated
#16 18.64     [javac]         String variableName = variable.getName();
#16 18.64     [javac]                                       ^
#16 18.64     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:269: warning: [deprecation] findGroup(String) in Group has been deprecated
#16 18.64     [javac]       Group nextParent = parent.findGroup(token);
#16 18.64     [javac]                                ^
#16 18.64     [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:310: warning: [deprecation] open(String) in NetcdfFile has been deprecated
#16 18.64     [javac]     netCDFFile = NetcdfFile.open(currentId);
#16 18.64     [javac]                            ^
#16 18.64     [javac] Note: Some input files use unchecked or unsafe operations.
#16 18.64     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 18.64     [javac] 20 warnings
#16 18.67 
#16 18.67 formats-gpl.jar:
#16 18.69       [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-gpl.jar
#16 18.84 [resolver:install] Using default POM (ome:formats-gpl:8.1.0-SNAPSHOT)
#16 18.84 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/formats-gpl-8.1.0-SNAPSHOT.pom
#16 18.85 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/formats-gpl-8.1.0-SNAPSHOT.jar
#16 18.85 [resolver:install] Installing ome:formats-gpl:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 18.85 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 18.85 
#16 18.85 deps-bio-formats-plugins:
#16 18.85 
#16 18.85 jar-bio-formats-plugins:
#16 18.99      [echo] isSnapshot = true
#16 19.12 
#16 19.12 init-title:
#16 19.12      [echo] ----------=========== bio-formats_plugins ===========----------
#16 19.12 
#16 19.12 init-timestamp:
#16 19.12 
#16 19.12 init:
#16 19.12 
#16 19.12 copy-resources:
#16 19.12     [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 19.12      [copy] Copying 3 files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 19.12 
#16 19.12 compile:
#16 19.39 [resolver:resolve] Resolving artifacts
#16 19.41     [javac] Compiling 70 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 19.62     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 19.62     [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 19.62     [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 19.62     [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 20.52     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:39: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.52     [javac] import loci.common.ReflectedUniverse;
#16 20.52     [javac]                   ^
#16 20.52     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:40: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.52     [javac] import loci.common.ReflectedUniverse;
#16 20.52     [javac]                   ^
#16 21.02     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/Updater.java:51: warning: [deprecation] STABLE_VERSION in UpgradeChecker has been deprecated
#16 21.02     [javac]     "Stable build (" + UpgradeChecker.STABLE_VERSION + ")";
#16 21.02     [javac]                                      ^
#16 21.12     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/InstallWizard.java:119: warning: [deprecation] URL(String) in URL has been deprecated
#16 21.12     [javac]     URL url = new URL(urlPath);
#16 21.12     [javac]               ^
#16 21.22     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 21.22     [javac]         ReflectedUniverse r = new ReflectedUniverse();
#16 21.22     [javac]         ^
#16 21.22     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 21.22     [javac]         ReflectedUniverse r = new ReflectedUniverse();
#16 21.22     [javac]                                   ^
#16 21.32     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 21.32     [javac]     ReflectedUniverse ru = new ReflectedUniverse();
#16 21.32     [javac]     ^
#16 21.32     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 21.32     [javac]     ReflectedUniverse ru = new ReflectedUniverse();
#16 21.32     [javac]                                ^
#16 21.52     [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/shortcut/ShortcutPanel.java:102: warning: [deprecation] URL(String) in URL has been deprecated
#16 21.52     [javac]       url = new URL(path);
#16 21.52     [javac]             ^
#16 21.72     [javac] Note: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#16 21.72     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 21.72     [javac] 13 warnings
#16 21.74 
#16 21.74 bio-formats-plugins.jar:
#16 21.74       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar
#16 21.77 [resolver:install] Using default POM (ome:bio-formats_plugins:8.1.0-SNAPSHOT)
#16 21.78 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/bio-formats_plugins-8.1.0-SNAPSHOT.pom
#16 21.78 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/bio-formats_plugins-8.1.0-SNAPSHOT.jar
#16 21.78 [resolver:install] Installing ome:bio-formats_plugins:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 21.78 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 21.78 
#16 21.78 deps-bio-formats-tools:
#16 21.78 
#16 21.78 jar-bio-formats-tools:
#16 21.87      [echo] isSnapshot = true
#16 22.00 
#16 22.00 init-title:
#16 22.00      [echo] ----------=========== bio-formats-tools ===========----------
#16 22.00 
#16 22.00 init-timestamp:
#16 22.00 
#16 22.00 init:
#16 22.00 
#16 22.00 copy-resources:
#16 22.00     [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 22.00 
#16 22.00 compile:
#16 22.25 [resolver:resolve] Resolving artifacts
#16 22.26     [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 22.47     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 22.47     [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 22.47     [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 22.47     [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 23.57     [javac] 4 warnings
#16 23.59 
#16 23.59 bio-formats-tools.jar:
#16 23.60       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar
#16 23.60 [resolver:install] Using default POM (ome:bio-formats-tools:8.1.0-SNAPSHOT)
#16 23.61 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.1.0-SNAPSHOT/bio-formats-tools-8.1.0-SNAPSHOT.pom
#16 23.62 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.1.0-SNAPSHOT/bio-formats-tools-8.1.0-SNAPSHOT.jar
#16 23.62 [resolver:install] Installing ome:bio-formats-tools:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 23.62 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 23.62 
#16 23.62 deps-tests:
#16 23.62 
#16 23.62 jar-tests:
#16 23.71      [echo] isSnapshot = true
#16 23.84 
#16 23.84 init-title:
#16 23.84      [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 23.84 
#16 23.84 init-timestamp:
#16 23.84 
#16 23.84 init:
#16 23.84 
#16 23.84 copy-resources:
#16 23.84     [mkdir] Created dir: /bio-formats-build/bioformats/components/test-suite/build/classes
#16 23.84 
#16 23.84 compile:
#16 24.13 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 24.20 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 24.21 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 24.63 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 25.04 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom (0 B at 0.0 KB/sec)
#16 25.06 [resolver:resolve] Resolving artifacts
#16 25.06 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 25.10 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 25.11 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/content/repositories/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 25.51 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 25.87 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar (0 B at 0.0 KB/sec)
#16 25.88     [javac] Compiling 23 source files to /bio-formats-build/bioformats/components/test-suite/build/classes
#16 26.08     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 26.08     [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
#16 26.08     [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
#16 26.08     [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
#16 27.18     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:605: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 27.18     [javac]         int index = unflattenedReader.getCoreIndex();
#16 27.18     [javac]                                      ^
#16 27.18     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:606: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 27.18     [javac]         reader.setCoreIndex(index);
#16 27.18     [javac]               ^
#16 27.38     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2247: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 27.38     [javac]             config.setSeries(resolutionReader.getCoreIndex());
#16 27.38     [javac]                                              ^
#16 27.38     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2413: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 27.38     [javac]             config.setSeries(resolutionReader.getCoreIndex());
#16 27.38     [javac]                                              ^
#16 27.68     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:52: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 27.68     [javac]         FormatReaderTest i1 = (FormatReaderTest) m1.getInstances()[0];
#16 27.68     [javac]                                                    ^
#16 27.69     [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:53: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 27.69     [javac]         FormatReaderTest i2 = (FormatReaderTest) m2.getInstances()[0];
#16 27.69     [javac]                                                    ^
#16 27.69     [javac] Note: Some input files use unchecked or unsafe operations.
#16 27.69     [javac] Note: Recompile with -Xlint:unchecked for details.
#16 27.69     [javac] 10 warnings
#16 27.72 
#16 27.72 tests.jar:
#16 27.73       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar
#16 27.74 [resolver:install] Using default POM (ome:test-suite:8.1.0-SNAPSHOT)
#16 27.74 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.1.0-SNAPSHOT/test-suite-8.1.0-SNAPSHOT.pom
#16 27.80 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.1.0-SNAPSHOT/test-suite-8.1.0-SNAPSHOT.jar
#16 27.80 [resolver:install] Installing ome:test-suite:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 27.80 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 27.80 
#16 27.80 jars:
#16 27.80 
#16 27.80 copy-jars:
#16 27.80 
#16 27.80 deps-formats-api:
#16 27.85      [echo] isSnapshot = true
#16 27.89 
#16 27.89 install-pom:
#16 28.05 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.1.0-SNAPSHOT/pom-bio-formats-8.1.0-SNAPSHOT.pom
#16 28.05 [resolver:install] Installing ome:pom-bio-formats:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 28.06 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 28.06 
#16 28.06 jar-formats-api:
#16 28.14      [echo] isSnapshot = true
#16 28.27 
#16 28.27 init-title:
#16 28.27      [echo] ----------=========== formats-api ===========----------
#16 28.27 
#16 28.27 init-timestamp:
#16 28.27 
#16 28.27 init:
#16 28.27 
#16 28.27 copy-resources:
#16 28.27 
#16 28.27 compile:
#16 28.40 [resolver:resolve] Resolving artifacts
#16 28.41 
#16 28.41 formats-api.jar:
#16 28.43 [resolver:install] Using default POM (ome:formats-api:8.1.0-SNAPSHOT)
#16 28.43 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.1.0-SNAPSHOT/formats-api-8.1.0-SNAPSHOT.pom
#16 28.43 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.1.0-SNAPSHOT/formats-api-8.1.0-SNAPSHOT.jar
#16 28.43 [resolver:install] Installing ome:formats-api:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 28.44 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 28.44 
#16 28.44 deps-turbojpeg:
#16 28.44 
#16 28.44 jar-turbojpeg:
#16 28.53      [echo] isSnapshot = true
#16 28.65 
#16 28.65 init-title:
#16 28.65      [echo] ----------=========== turbojpeg ===========----------
#16 28.65 
#16 28.65 init-timestamp:
#16 28.65 
#16 28.65 init:
#16 28.65 
#16 28.65 copy-resources:
#16 28.65 
#16 28.65 compile:
#16 28.66 [resolver:resolve] Resolving artifacts
#16 28.66 
#16 28.66 jar:
#16 28.67 [resolver:install] Using default POM (ome:turbojpeg:8.1.0-SNAPSHOT)
#16 28.67 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.1.0-SNAPSHOT/turbojpeg-8.1.0-SNAPSHOT.pom
#16 28.67 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.1.0-SNAPSHOT/turbojpeg-8.1.0-SNAPSHOT.jar
#16 28.67 [resolver:install] Installing ome:turbojpeg:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 28.68 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 28.68 
#16 28.68 deps-formats-bsd:
#16 28.68 
#16 28.68 jar-formats-bsd:
#16 28.76      [echo] isSnapshot = true
#16 28.88 
#16 28.88 init-title:
#16 28.88      [echo] ----------=========== formats-bsd ===========----------
#16 28.88 
#16 28.88 init-timestamp:
#16 28.88 
#16 28.88 init:
#16 28.88 
#16 28.88 copy-resources:
#16 28.88 
#16 28.88 compile:
#16 29.07 [resolver:resolve] Resolving artifacts
#16 29.09 
#16 29.09 formats-bsd.jar:
#16 29.12 [resolver:install] Using default POM (ome:formats-bsd:8.1.0-SNAPSHOT)
#16 29.13 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.1.0-SNAPSHOT/formats-bsd-8.1.0-SNAPSHOT.pom
#16 29.13 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.1.0-SNAPSHOT/formats-bsd-8.1.0-SNAPSHOT.jar
#16 29.13 [resolver:install] Installing ome:formats-bsd:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 29.13 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 29.13 
#16 29.13 deps-formats-gpl:
#16 29.13 
#16 29.13 jar-formats-gpl:
#16 29.21      [echo] isSnapshot = true
#16 29.34 
#16 29.34 init-title:
#16 29.34      [echo] ----------=========== formats-gpl ===========----------
#16 29.34 
#16 29.34 init-timestamp:
#16 29.34 
#16 29.34 init:
#16 29.34 
#16 29.34 copy-resources:
#16 29.34 
#16 29.34 compile:
#16 29.56 [resolver:resolve] Resolving artifacts
#16 29.58 
#16 29.58 formats-gpl.jar:
#16 29.62 [resolver:install] Using default POM (ome:formats-gpl:8.1.0-SNAPSHOT)
#16 29.62 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/formats-gpl-8.1.0-SNAPSHOT.pom
#16 29.62 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/formats-gpl-8.1.0-SNAPSHOT.jar
#16 29.62 [resolver:install] Installing ome:formats-gpl:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 29.63 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 29.63 
#16 29.63 deps-bio-formats-plugins:
#16 29.63 
#16 29.63 jar-bio-formats-plugins:
#16 29.71      [echo] isSnapshot = true
#16 29.83 
#16 29.83 init-title:
#16 29.83      [echo] ----------=========== bio-formats_plugins ===========----------
#16 29.83 
#16 29.83 init-timestamp:
#16 29.83 
#16 29.83 init:
#16 29.83 
#16 29.83 copy-resources:
#16 29.84 
#16 29.84 compile:
#16 30.10 [resolver:resolve] Resolving artifacts
#16 30.11 
#16 30.11 bio-formats-plugins.jar:
#16 30.13 [resolver:install] Using default POM (ome:bio-formats_plugins:8.1.0-SNAPSHOT)
#16 30.13 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/bio-formats_plugins-8.1.0-SNAPSHOT.pom
#16 30.13 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/bio-formats_plugins-8.1.0-SNAPSHOT.jar
#16 30.14 [resolver:install] Installing ome:bio-formats_plugins:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 30.14 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 30.14 
#16 30.14 deps-bio-formats-tools:
#16 30.14 
#16 30.14 jar-bio-formats-tools:
#16 30.23      [echo] isSnapshot = true
#16 30.36 
#16 30.36 init-title:
#16 30.36      [echo] ----------=========== bio-formats-tools ===========----------
#16 30.36 
#16 30.36 init-timestamp:
#16 30.36 
#16 30.36 init:
#16 30.36 
#16 30.36 copy-resources:
#16 30.36 
#16 30.36 compile:
#16 30.62 [resolver:resolve] Resolving artifacts
#16 30.63 
#16 30.63 bio-formats-tools.jar:
#16 30.64 [resolver:install] Using default POM (ome:bio-formats-tools:8.1.0-SNAPSHOT)
#16 30.64 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.1.0-SNAPSHOT/bio-formats-tools-8.1.0-SNAPSHOT.pom
#16 30.64 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.1.0-SNAPSHOT/bio-formats-tools-8.1.0-SNAPSHOT.jar
#16 30.64 [resolver:install] Installing ome:bio-formats-tools:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 30.64 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 30.65 
#16 30.65 deps-tests:
#16 30.65 
#16 30.65 jar-tests:
#16 30.73      [echo] isSnapshot = true
#16 30.90 
#16 30.90 init-title:
#16 30.90      [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 30.90 
#16 30.90 init-timestamp:
#16 30.90 
#16 30.90 init:
#16 30.90 
#16 30.90 copy-resources:
#16 30.90 
#16 30.90 compile:
#16 31.16 [resolver:resolve] Resolving artifacts
#16 31.17 
#16 31.17 tests.jar:
#16 31.18 [resolver:install] Using default POM (ome:test-suite:8.1.0-SNAPSHOT)
#16 31.18 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.1.0-SNAPSHOT/test-suite-8.1.0-SNAPSHOT.pom
#16 31.18 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.1.0-SNAPSHOT/test-suite-8.1.0-SNAPSHOT.jar
#16 31.18 [resolver:install] Installing ome:test-suite:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 31.18 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 31.19 
#16 31.19 jars:
#16 31.19 
#16 31.19 tools:
#16 31.19      [echo] ----------=========== bioformats_package ===========----------
#16 31.27      [echo] isSnapshot = true
#16 31.39 
#16 31.39 init-timestamp:
#16 31.39 
#16 31.39 bundle:
#16 31.62 [resolver:resolve] Resolving artifacts
#16 31.63     [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats_plugins/8.1.0-SNAPSHOT/bio-formats_plugins-8.1.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.66     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-common/6.0.25-SNAPSHOT/ome-common-6.0.25-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.68     [unzip] Expanding: /home/build/.m2/repository/io/minio/minio/5.0.2/minio-5.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.71     [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client-xml/1.20.0/google-http-client-xml-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.71     [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client/1.20.0/google-http-client-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.78     [unzip] Expanding: /home/build/.m2/repository/xpp3/xpp3/1.1.4c/xpp3-1.1.4c.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.79     [unzip] Expanding: /home/build/.m2/repository/com/squareup/okhttp3/okhttp/3.7.0/okhttp-3.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.85     [unzip] Expanding: /home/build/.m2/repository/com/squareup/okio/okio/1.12.0/okio-1.12.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 31.86     [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-databind/2.14.2/jackson-databind-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.08     [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-core/2.14.2/jackson-core-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.13     [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-annotations/2.14.2/jackson-annotations-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.15     [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/kryo/5.4.0/kryo-5.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.21     [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/reflectasm/1.11.9/reflectasm-1.11.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.22     [unzip] Expanding: /home/build/.m2/repository/org/objenesis/objenesis/3.3/objenesis-3.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.23     [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/minlog/1.3.1/minlog-1.3.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.24     [unzip] Expanding: /home/build/.m2/repository/joda-time/joda-time/2.12.7/joda-time-2.12.7.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.41     [unzip] Expanding: /home/build/.m2/repository/com/google/guava/guava/32.0.1-jre/guava-32.0.1-jre.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.92     [unzip] Expanding: /home/build/.m2/repository/com/google/guava/failureaccess/1.0.1/failureaccess-1.0.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.92     [unzip] Expanding: /home/build/.m2/repository/com/google/guava/listenablefuture/9999.0-empty-to-avoid-conflict-with-guava/listenablefuture-9999.0-empty-to-avoid-conflict-with-guava.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.93     [unzip] Expanding: /home/build/.m2/repository/com/google/code/findbugs/jsr305/3.0.2/jsr305-3.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.93     [unzip] Expanding: /home/build/.m2/repository/org/checkerframework/checker-qual/3.33.0/checker-qual-3.33.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.02     [unzip] Expanding: /home/build/.m2/repository/com/google/errorprone/error_prone_annotations/2.18.0/error_prone_annotations-2.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.03     [unzip] Expanding: /home/build/.m2/repository/com/google/j2objc/j2objc-annotations/2.8/j2objc-annotations-2.8.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.03     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-xml/6.3.7-SNAPSHOT/ome-xml-6.3.7-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.09     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/specification/6.3.7-SNAPSHOT/specification-6.3.7-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.15     [unzip] Expanding: /home/build/.m2/repository/ome/formats-api/8.1.0-SNAPSHOT/formats-api-8.1.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.17     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-codecs/1.0.4-SNAPSHOT/ome-codecs-1.0.4-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.18     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-jai/0.1.5-SNAPSHOT/ome-jai-0.1.5-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.32     [unzip] Expanding: /home/build/.m2/repository/io/airlift/aircompressor/0.27/aircompressor-0.27.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.35     [unzip] Expanding: /home/build/.m2/repository/ome/formats-bsd/8.1.0-SNAPSHOT/formats-bsd-8.1.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.43     [unzip] Expanding: /home/build/.m2/repository/ome/turbojpeg/8.1.0-SNAPSHOT/turbojpeg-8.1.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.47     [unzip] Expanding: /home/build/.m2/repository/org/scijava/native-lib-loader/2.4.0/native-lib-loader-2.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.47     [unzip] Expanding: /home/build/.m2/repository/commons-lang/commons-lang/2.6/commons-lang-2.6.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.51     [unzip] Expanding: /home/build/.m2/repository/org/perf4j/perf4j/0.9.16/perf4j-0.9.16.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.53     [unzip] Expanding: /home/build/.m2/repository/cisd/jhdf5/19.04.1/jhdf5-19.04.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 33.97     [unzip] Expanding: /home/build/.m2/repository/cisd/base/18.09.0/base-18.09.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.00     [unzip] Expanding: /home/build/.m2/repository/commons-io/commons-io/2.6/commons-io-2.6.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.03     [unzip] Expanding: /home/build/.m2/repository/org/apache/commons/commons-lang3/3.7/commons-lang3-3.7.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.10     [unzip] Expanding: /home/build/.m2/repository/com/drewnoakes/metadata-extractor/2.18.0/metadata-extractor-2.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.21     [unzip] Expanding: /home/build/.m2/repository/com/adobe/xmp/xmpcore/6.1.11/xmpcore-6.1.11.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.22     [unzip] Expanding: /home/build/.m2/repository/ome/jxrlib-all/0.2.4/jxrlib-all-0.2.4.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.24     [unzip] Expanding: /home/build/.m2/repository/org/json/json/20231013/json-20231013.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.25     [unzip] Expanding: /home/build/.m2/repository/xerces/xercesImpl/2.12.2/xercesImpl-2.12.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.48     [unzip] Expanding: /home/build/.m2/repository/xml-apis/xml-apis/1.4.01/xml-apis-1.4.01.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.56     [unzip] Expanding: /home/build/.m2/repository/org/yaml/snakeyaml/2.0/snakeyaml-2.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.62     [unzip] Expanding: /home/build/.m2/repository/ome/formats-gpl/8.1.0-SNAPSHOT/formats-gpl-8.1.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.72     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-mdbtools/5.3.4-SNAPSHOT/ome-mdbtools-5.3.4-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.73     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/metakit/5.3.8-SNAPSHOT/metakit-5.3.8-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.74     [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-poi/5.3.10-SNAPSHOT/ome-poi-5.3.10-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.86     [unzip] Expanding: /home/build/.m2/repository/commons-logging/commons-logging/1.2/commons-logging-1.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 34.87     [unzip] Expanding: /home/build/.m2/repository/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.36     [unzip] Expanding: /home/build/.m2/repository/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.37     [unzip] Expanding: /home/build/.m2/repository/org/apache/httpcomponents/httpclient/4.5.13/httpclient-4.5.13.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.49     [unzip] Expanding: /home/build/.m2/repository/commons-codec/commons-codec/1.11/commons-codec-1.11.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.54     [unzip] Expanding: /home/build/.m2/repository/org/apache/httpcomponents/httpmime/4.5.13/httpmime-4.5.13.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.55     [unzip] Expanding: /home/build/.m2/repository/com/google/re2j/re2j/1.3/re2j-1.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.56     [unzip] Expanding: /home/build/.m2/repository/commons-math/commons-math/1.2/commons-math-1.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.62     [unzip] Expanding: /home/build/.m2/repository/org/xerial/sqlite-jdbc/3.28.0/sqlite-jdbc-3.28.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.79     [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-forms/1.7.2/jgoodies-forms-1.7.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.81     [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-common/1.7.0/jgoodies-common-1.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.81     [unzip] Expanding: /home/build/.m2/repository/org/slf4j/slf4j-api/2.0.9/slf4j-api-2.0.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.83     [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats-tools/8.1.0-SNAPSHOT/bio-formats-tools-8.1.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.83     [unzip] Expanding: /home/build/.m2/repository/xalan/serializer/2.7.3/serializer-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 35.87     [unzip] Expanding: /home/build/.m2/repository/xalan/xalan/2.7.3/xalan-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.29     [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-core/1.3.14/logback-core-1.3.14.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.41     [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-classic/1.3.14/logback-classic-1.3.14.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.81       [jar] Building jar: /bio-formats-build/bioformats/artifacts/bioformats_package.jar
#16 42.56    [delete] Deleting directory /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 43.14 [resolver:install] Using default POM (ome:bioformats_package:8.1.0-SNAPSHOT)
#16 43.14 [resolver:install] Installing /bio-formats-build/bioformats/components/bundles/bioformats_package/pom.xml to /home/build/.m2/repository/ome/bioformats_package/8.1.0-SNAPSHOT/bioformats_package-8.1.0-SNAPSHOT.pom
#16 43.16 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bioformats_package.jar to /home/build/.m2/repository/ome/bioformats_package/8.1.0-SNAPSHOT/bioformats_package-8.1.0-SNAPSHOT.jar
#16 43.20 [resolver:install] Installing ome:bioformats_package:8.1.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/8.1.0-SNAPSHOT/maven-metadata-local.xml
#16 43.20 [resolver:install] Installing ome:bioformats_package/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/maven-metadata-local.xml
#16 43.20 
#16 43.20 BUILD SUCCESSFUL
#16 43.20 Total time: 39 seconds
#16 DONE 43.4s

#17 [13/13] WORKDIR /bio-formats-build/bioformats/components/test-suite
#17 DONE 0.1s

#18 exporting to image
#18 exporting layers
#18 exporting layers 3.3s done
#18 writing image sha256:2d9e6b7889d8718a47341bfb994691dbeea00c79ee80c25c25a49b3b87d8000a done
#18 naming to docker.io/snoopycrimecop/bioformats:merge_ci done
#18 DONE 3.4s

 1 warning found (use docker --debug to expand):
 - LegacyKeyValueFormat: "ENV key=value" should be used instead of legacy "ENV key value" format (line 30)
Finished: SUCCESS