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2024-05-19 00:42:44,445 [ scc.git] DEBUG Not adding comment to issue #123, already --conflicts.
2024-05-19 00:42:44,445 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a14f62a940f4974a305b3f5858049ee493b898ef'
2024-05-19 00:42:44,452 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:42:44,457 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 147 (Name option) a14f62a940f4974a305b3f5858049ee493b898ef'
2024-05-19 00:42:44,470 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py
2024-05-19 00:42:44,470 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py
2024-05-19 00:42:44,470 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-19 00:42:44,474 [ scc.git] DEBUG README.rst | 30 ++++++++++++++++++------------
2024-05-19 00:42:44,474 [ scc.git] DEBUG src/omero_zarr/cli.py | 9 +++++++++
2024-05-19 00:42:44,474 [ scc.git] DEBUG src/omero_zarr/masks.py | 4 ++--
2024-05-19 00:42:44,474 [ scc.git] DEBUG src/omero_zarr/raw_pixels.py | 28 +++++++++++++++++++++++-----
2024-05-19 00:42:44,474 [ scc.git] DEBUG src/omero_zarr/util.py | 2 +-
2024-05-19 00:42:44,474 [ scc.git] DEBUG 5 files changed, 53 insertions(+), 20 deletions(-)
2024-05-19 00:42:44,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:42:44,883 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-19 00:42:44,926 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:42:44,927 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:42:44,932 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-19 00:42:44,975 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-19 00:42:44,982 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcb3a69b640> has no local changes
2024-05-19 00:42:44,982 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft)
Already up to date.
Merged PRs:
- PR 147 will-moore 'Name option'
Conflicting PRs (not included):
- PR 102 will-moore 'Zarr export tests'
- PR 123 will-moore 'Support export of Fileset:ID'
Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)'
2024-05-19 00:42:44,994 [ scc.git] DEBUG [detached HEAD e2e159a] merge master -Dorg -Ssuccess-only
2024-05-19 00:42:44,994 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:42:44,995 [ scc.repo] DEBUG ## PRs found:
2024-05-19 00:42:45,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None
2024-05-19 00:42:45,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/562 HTTP/1.1" 200 None
2024-05-19 00:42:46,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/0c814d66251860ddb01c00ade8469e45f7a1be23 HTTP/1.1" 200 None
2024-05-19 00:42:46,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/0c814d66251860ddb01c00ade8469e45f7a1be23/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:42:47,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/0c814d66251860ddb01c00ade8469e45f7a1be23/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-19 00:42:47,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/0c814d66251860ddb01c00ade8469e45f7a1be23 HTTP/1.1" 200 None
2024-05-19 00:42:48,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/0c814d66251860ddb01c00ade8469e45f7a1be23?per_page=1 HTTP/1.1" 200 2
2024-05-19 00:42:48,186 [ scc.repo] DEBUG - PR 562 will-moore 'Add changelog 7.0.0'
2024-05-19 00:42:48,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/560 HTTP/1.1" 200 None
2024-05-19 00:42:49,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/560/comments HTTP/1.1" 200 None
2024-05-19 00:42:49,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/93463371bd79d20cd7abe760db0e7cbdbb897919 HTTP/1.1" 200 None
2024-05-19 00:42:50,032 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/93463371bd79d20cd7abe760db0e7cbdbb897919/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:42:50,496 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/93463371bd79d20cd7abe760db0e7cbdbb897919/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-19 00:42:50,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555 HTTP/1.1" 200 None
2024-05-19 00:42:51,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/555/comments HTTP/1.1" 200 None
2024-05-19 00:42:51,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None
2024-05-19 00:42:52,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:42:52,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-19 00:42:53,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/3179811fd0a1d65e2dc5f56013cf92e086da24ab HTTP/1.1" 200 None
2024-05-19 00:42:53,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/3179811fd0a1d65e2dc5f56013cf92e086da24ab?per_page=1 HTTP/1.1" 200 2
2024-05-19 00:42:53,651 [ scc.repo] DEBUG - PR 555 will-moore 'Points in shape editor'
2024-05-19 00:42:54,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/549 HTTP/1.1" 200 None
2024-05-19 00:42:54,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24 HTTP/1.1" 200 None
2024-05-19 00:42:55,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:42:55,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-19 00:42:55,992 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24 HTTP/1.1" 200 None
2024-05-19 00:42:56,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24?per_page=1 HTTP/1.1" 200 2
2024-05-19 00:42:56,412 [ scc.repo] DEBUG - PR 549 will-moore 'Inset feature'
2024-05-19 00:42:56,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/543 HTTP/1.1" 200 None
2024-05-19 00:42:57,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/543/comments HTTP/1.1" 200 None
2024-05-19 00:42:57,331 [ scc.repo] DEBUG ## Branches found:
2024-05-19 00:42:57,332 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2024-05-19 00:42:57,332 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:42:57,332 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:42:57,339 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-19 00:42:57,344 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-19 00:42:57,345 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-19 00:42:57,351 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-19 00:42:57,358 [ scc.git] DEBUG Already up to date.
2024-05-19 00:42:57,358 [ scc.git] DEBUG Calling 'git fetch origin pull/549/head'
2024-05-19 00:42:58,411 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2024-05-19 00:42:58,411 [ scc.git] DEBUG * branch refs/pull/549/head -> FETCH_HEAD
2024-05-19 00:42:58,417 [ scc.git] DEBUG Calling 'git fetch origin pull/555/head'
2024-05-19 00:42:59,140 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2024-05-19 00:42:59,140 [ scc.git] DEBUG * branch refs/pull/555/head -> FETCH_HEAD
2024-05-19 00:42:59,146 [ scc.git] DEBUG Calling 'git fetch origin pull/562/head'
2024-05-19 00:42:59,532 [ scc.git] DEBUG From https://github.com/ome/omero-figure
2024-05-19 00:42:59,532 [ scc.git] DEBUG * branch refs/pull/562/head -> FETCH_HEAD
2024-05-19 00:42:59,538 [ scc.git] DEBUG ## Unique users: []
2024-05-19 00:42:59,538 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:42:59,538 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:42:59,545 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24'
2024-05-19 00:42:59,553 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:42:59,559 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 549 (Inset feature) 6b34dcc58aee2bb7adb2a2f1a2fb1259944f9c24'
2024-05-19 00:42:59,721 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-19 00:42:59,727 [ scc.git] DEBUG src/js/models/figure_model.js | 8 +++-
2024-05-19 00:42:59,727 [ scc.git] DEBUG src/js/models/panel_model.js | 84 +++++++++++++++++++++++++++++++++++
2024-05-19 00:42:59,727 [ scc.git] DEBUG src/js/shapeEditorTest.js | 7 +++
2024-05-19 00:42:59,727 [ scc.git] DEBUG src/js/shape_editor/rect.js | 33 +++++++++++++-
2024-05-19 00:42:59,727 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 1 +
2024-05-19 00:42:59,727 [ scc.git] DEBUG src/js/views/figure_view.js | 7 ++-
2024-05-19 00:42:59,727 [ scc.git] DEBUG src/js/views/right_panel_view.js | 74 +++++++++++++++++++++++++++++-
2024-05-19 00:42:59,727 [ scc.git] DEBUG src/js/views/util.js | 54 ++++++++++++++++++++++
2024-05-19 00:42:59,727 [ scc.git] DEBUG src/templates/rois_form.template.html | 7 +++
2024-05-19 00:42:59,729 [ scc.git] DEBUG 9 files changed, 270 insertions(+), 5 deletions(-)
2024-05-19 00:42:59,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:42:59,888 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3179811fd0a1d65e2dc5f56013cf92e086da24ab'
2024-05-19 00:42:59,896 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:42:59,905 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Points in shape editor) 3179811fd0a1d65e2dc5f56013cf92e086da24ab'
2024-05-19 00:43:00,109 [ scc.git] DEBUG Auto-merging src/js/models/panel_model.js
2024-05-19 00:43:00,109 [ scc.git] DEBUG Auto-merging src/js/shapeEditorTest.js
2024-05-19 00:43:00,109 [ scc.git] DEBUG Auto-merging src/js/shape_editor/shape_manager.js
2024-05-19 00:43:00,110 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-19 00:43:00,118 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 8 +-
2024-05-19 00:43:00,119 [ scc.git] DEBUG src/css/figure.css | 4 +
2024-05-19 00:43:00,119 [ scc.git] DEBUG src/images/point-icon-24.png | Bin 0 -> 2477 bytes
2024-05-19 00:43:00,119 [ scc.git] DEBUG src/js/models/panel_model.js | 2 +-
2024-05-19 00:43:00,119 [ scc.git] DEBUG src/js/shapeEditorTest.js | 5 +
2024-05-19 00:43:00,119 [ scc.git] DEBUG src/js/shape_editor/ellipse.js | 474 ++++++++++++++++++++-
2024-05-19 00:43:00,119 [ scc.git] DEBUG src/js/shape_editor/shape_manager.js | 12 +-
2024-05-19 00:43:00,119 [ scc.git] DEBUG src/js/views/roi_loader_view.js | 1 +
2024-05-19 00:43:00,119 [ scc.git] DEBUG src/shapeEditorTest.html | 4 +-
2024-05-19 00:43:00,119 [ scc.git] DEBUG src/templates/shapes/shape_toolbar.template.html | 3 +
2024-05-19 00:43:00,119 [ scc.git] DEBUG 10 files changed, 502 insertions(+), 11 deletions(-)
2024-05-19 00:43:00,119 [ scc.git] DEBUG create mode 100644 src/images/point-icon-24.png
2024-05-19 00:43:00,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:43:00,304 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0c814d66251860ddb01c00ade8469e45f7a1be23'
2024-05-19 00:43:00,315 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:43:00,326 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 562 (Add changelog 7.0.0) 0c814d66251860ddb01c00ade8469e45f7a1be23'
2024-05-19 00:43:00,354 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-19 00:43:00,357 [ scc.git] DEBUG CHANGELOG.md | 10 ++++++++++
2024-05-19 00:43:00,357 [ scc.git] DEBUG 1 file changed, 10 insertions(+)
2024-05-19 00:43:00,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:43:00,711 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-19 00:43:00,752 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:43:00,753 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:43:00,758 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-19 00:43:00,801 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-19 00:43:00,811 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcb3a6d2be0> has no local changes
2024-05-19 00:43:00,811 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-figure
Excluded PRs:
- PR 560 will-moore 'Max projection bytes' (status: failure)
- PR 543 will-moore 'Plate well labels' (stage: draft)
Already up to date.
Merged PRs:
- PR 549 will-moore 'Inset feature'
- PR 555 will-moore 'Points in shape editor'
- PR 562 will-moore 'Add changelog 7.0.0'
Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)'
2024-05-19 00:43:00,824 [ scc.git] DEBUG [detached HEAD 714ed5c9] merge master -Dorg -Ssuccess-only
2024-05-19 00:43:00,824 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:43:00,824 [ scc.repo] DEBUG ## PRs found:
2024-05-19 00:43:01,199 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None
2024-05-19 00:43:01,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None
2024-05-19 00:43:02,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None
2024-05-19 00:43:02,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None
2024-05-19 00:43:02,980 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:43:03,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337 HTTP/1.1" 200 None
2024-05-19 00:43:03,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2
2024-05-19 00:43:03,870 [ scc.repo] DEBUG - PR 18 jburel 'default size z value'
2024-05-19 00:43:03,870 [ scc.repo] DEBUG ## Branches found:
2024-05-19 00:43:03,870 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2024-05-19 00:43:03,870 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:43:03,870 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:43:03,878 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-19 00:43:03,884 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-19 00:43:03,884 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-19 00:43:03,890 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-19 00:43:03,896 [ scc.git] DEBUG Already up to date.
2024-05-19 00:43:03,897 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head'
2024-05-19 00:43:04,276 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage
2024-05-19 00:43:04,277 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD
2024-05-19 00:43:04,282 [ scc.git] DEBUG ## Unique users: []
2024-05-19 00:43:04,282 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:43:04,282 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:43:04,288 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337'
2024-05-19 00:43:04,295 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:43:04,301 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337'
2024-05-19 00:43:04,341 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py
2024-05-19 00:43:04,342 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-19 00:43:04,345 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++
2024-05-19 00:43:04,345 [ scc.git] DEBUG 1 file changed, 2 insertions(+)
2024-05-19 00:43:04,509 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:43:04,510 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-19 00:43:04,555 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:43:04,555 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:43:04,561 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-19 00:43:04,605 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-19 00:43:04,612 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcb3a6ac550> has no local changes
2024-05-19 00:43:04,612 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)'
2024-05-19 00:43:04,621 [ scc.git] DEBUG [detached HEAD 652c048] merge master -Dorg -Ssuccess-only
2024-05-19 00:43:04,621 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:43:04,621 [ scc.repo] DEBUG ## PRs found:
2024-05-19 00:43:05,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None
2024-05-19 00:43:05,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/111 HTTP/1.1" 200 None
2024-05-19 00:43:05,565 [ scc.repo] DEBUG # ... Include label: dependencies
2024-05-19 00:43:06,093 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None
2024-05-19 00:43:06,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:43:07,039 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-19 00:43:07,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893 HTTP/1.1" 200 None
2024-05-19 00:43:07,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/37cfaf2f52e78b2cab2f49b0c02c7553d2b57893?per_page=1 HTTP/1.1" 200 2
2024-05-19 00:43:07,921 [ scc.repo] DEBUG - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2'
2024-05-19 00:43:07,922 [ scc.repo] DEBUG ## Branches found:
2024-05-19 00:43:07,922 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2024-05-19 00:43:07,922 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:43:07,922 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:43:07,928 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-19 00:43:07,933 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-19 00:43:07,933 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-19 00:43:07,939 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-19 00:43:07,944 [ scc.git] DEBUG Already up to date.
2024-05-19 00:43:07,944 [ scc.git] DEBUG Calling 'git fetch origin pull/111/head'
2024-05-19 00:43:08,427 [ scc.git] DEBUG From https://github.com/ome/omero-gallery
2024-05-19 00:43:08,428 [ scc.git] DEBUG * branch refs/pull/111/head -> FETCH_HEAD
2024-05-19 00:43:08,432 [ scc.git] DEBUG ## Unique users: []
2024-05-19 00:43:08,432 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:43:08,432 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:43:08,439 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...37cfaf2f52e78b2cab2f49b0c02c7553d2b57893'
2024-05-19 00:43:08,446 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:43:08,451 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 111 (Bump semver from 5.7.0 to 5.7.2) 37cfaf2f52e78b2cab2f49b0c02c7553d2b57893'
2024-05-19 00:43:08,462 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-19 00:43:08,466 [ scc.git] DEBUG package-lock.json | 18 ++++++------------
2024-05-19 00:43:08,466 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 12 deletions(-)
2024-05-19 00:43:08,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:43:08,636 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-19 00:43:08,676 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:43:08,676 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:43:08,681 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-19 00:43:08,719 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-19 00:43:08,727 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcb3a6af9d0> has no local changes
2024-05-19 00:43:08,727 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2'
Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)'
2024-05-19 00:43:08,736 [ scc.git] DEBUG [detached HEAD 55282a1] merge master -Dorg -Ssuccess-only
2024-05-19 00:43:08,737 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:43:08,737 [ scc.repo] DEBUG ## PRs found:
2024-05-19 00:43:09,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None
2024-05-19 00:43:09,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/475 HTTP/1.1" 200 None
2024-05-19 00:43:10,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/4a89dc6f0646b38c9c91d5f15003dcabad5c479f HTTP/1.1" 200 None
2024-05-19 00:43:10,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/4a89dc6f0646b38c9c91d5f15003dcabad5c479f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:43:10,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/4a89dc6f0646b38c9c91d5f15003dcabad5c479f/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-19 00:43:11,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/4a89dc6f0646b38c9c91d5f15003dcabad5c479f HTTP/1.1" 200 None
2024-05-19 00:43:11,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/4a89dc6f0646b38c9c91d5f15003dcabad5c479f?per_page=1 HTTP/1.1" 200 2
2024-05-19 00:43:11,911 [ scc.repo] DEBUG - PR 475 will-moore 'Update build and publish in gha'
2024-05-19 00:43:12,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None
2024-05-19 00:43:12,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None
2024-05-19 00:43:13,281 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2024-05-19 00:43:13,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:43:14,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-19 00:43:14,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9 HTTP/1.1" 200 None
2024-05-19 00:43:15,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2
2024-05-19 00:43:15,100 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip'
2024-05-19 00:43:15,556 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/469 HTTP/1.1" 200 None
2024-05-19 00:43:15,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/469/comments HTTP/1.1" 200 None
2024-05-19 00:43:16,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/0eaee155506e5851ccebed9a01799cf86ebb9f63 HTTP/1.1" 200 None
2024-05-19 00:43:16,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/0eaee155506e5851ccebed9a01799cf86ebb9f63/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:43:17,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/0eaee155506e5851ccebed9a01799cf86ebb9f63/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-19 00:43:17,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/0eaee155506e5851ccebed9a01799cf86ebb9f63 HTTP/1.1" 200 None
2024-05-19 00:43:18,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/0eaee155506e5851ccebed9a01799cf86ebb9f63?per_page=1 HTTP/1.1" 200 2
2024-05-19 00:43:18,329 [ scc.repo] DEBUG - PR 469 will-moore 'changelog 0.14.0'
2024-05-19 00:43:18,789 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465 HTTP/1.1" 200 None
2024-05-19 00:43:19,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/465/comments HTTP/1.1" 200 None
2024-05-19 00:43:19,783 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2024-05-19 00:43:20,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:43:20,722 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-19 00:43:21,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/63dd9266a853ff522780066673d0ae2b770238cd HTTP/1.1" 200 None
2024-05-19 00:43:21,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/63dd9266a853ff522780066673d0ae2b770238cd?per_page=1 HTTP/1.1" 200 2
2024-05-19 00:43:21,595 [ scc.repo] DEBUG - PR 465 will-moore 'Save as Figure'
2024-05-19 00:43:22,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None
2024-05-19 00:43:22,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None
2024-05-19 00:43:23,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2024-05-19 00:43:23,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:43:23,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30 HTTP/1.1" 200 None
2024-05-19 00:43:24,392 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2
2024-05-19 00:43:24,393 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix'
2024-05-19 00:43:24,393 [ scc.repo] DEBUG ## Branches found:
2024-05-19 00:43:24,393 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2024-05-19 00:43:24,393 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:43:24,393 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:43:24,400 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-19 00:43:24,404 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-19 00:43:24,404 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-19 00:43:24,411 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-19 00:43:24,417 [ scc.git] DEBUG Already up to date.
2024-05-19 00:43:24,417 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head'
2024-05-19 00:43:24,817 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-05-19 00:43:24,817 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD
2024-05-19 00:43:24,822 [ scc.git] DEBUG Calling 'git fetch origin pull/465/head'
2024-05-19 00:43:25,637 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-05-19 00:43:25,637 [ scc.git] DEBUG * branch refs/pull/465/head -> FETCH_HEAD
2024-05-19 00:43:25,642 [ scc.git] DEBUG Calling 'git fetch origin pull/469/head'
2024-05-19 00:43:26,057 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-05-19 00:43:26,057 [ scc.git] DEBUG * branch refs/pull/469/head -> FETCH_HEAD
2024-05-19 00:43:26,062 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head'
2024-05-19 00:43:26,463 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-05-19 00:43:26,464 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD
2024-05-19 00:43:26,468 [ scc.git] DEBUG Calling 'git fetch origin pull/475/head'
2024-05-19 00:43:26,852 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer
2024-05-19 00:43:26,852 [ scc.git] DEBUG * branch refs/pull/475/head -> FETCH_HEAD
2024-05-19 00:43:26,857 [ scc.git] DEBUG ## Unique users: []
2024-05-19 00:43:26,857 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:43:26,857 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:43:26,863 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30'
2024-05-19 00:43:26,869 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:43:26,874 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30'
2024-05-19 00:43:26,948 [ scc.git] DEBUG Auto-merging src/model/image_info.js
2024-05-19 00:43:26,949 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-19 00:43:26,953 [ scc.git] DEBUG src/model/image_info.js | 7 ++++---
2024-05-19 00:43:26,953 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++-
2024-05-19 00:43:26,953 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-)
2024-05-19 00:43:27,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:43:27,117 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...63dd9266a853ff522780066673d0ae2b770238cd'
2024-05-19 00:43:27,126 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:43:27,131 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 465 (Save as Figure) 63dd9266a853ff522780066673d0ae2b770238cd'
2024-05-19 00:43:27,157 [ scc.git] DEBUG Auto-merging plugin/omero_iviewer/views.py
2024-05-19 00:43:27,157 [ scc.git] DEBUG Auto-merging src/app/context.js
2024-05-19 00:43:27,157 [ scc.git] DEBUG Auto-merging src/utils/constants.js
2024-05-19 00:43:27,157 [ scc.git] DEBUG Auto-merging src/viewers/viewer/Viewer.js
2024-05-19 00:43:27,157 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-19 00:43:27,162 [ scc.git] DEBUG plugin/omero_iviewer/views.py | 17 +++-
2024-05-19 00:43:27,162 [ scc.git] DEBUG src/app/context.js | 6 +-
2024-05-19 00:43:27,162 [ scc.git] DEBUG src/app/header.html | 5 +
2024-05-19 00:43:27,162 [ scc.git] DEBUG src/app/header.js | 45 ++++++++-
2024-05-19 00:43:27,162 [ scc.git] DEBUG src/utils/constants.js | 6 ++
2024-05-19 00:43:27,162 [ scc.git] DEBUG src/utils/figure.js | 217 ++++++++++++++++++++++++++++++++++++++++++
2024-05-19 00:43:27,162 [ scc.git] DEBUG 6 files changed, 290 insertions(+), 6 deletions(-)
2024-05-19 00:43:27,162 [ scc.git] DEBUG create mode 100644 src/utils/figure.js
2024-05-19 00:43:27,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:43:27,526 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...0eaee155506e5851ccebed9a01799cf86ebb9f63'
2024-05-19 00:43:27,533 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:43:27,538 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 469 (changelog 0.14.0) 0eaee155506e5851ccebed9a01799cf86ebb9f63'
2024-05-19 00:43:27,551 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-19 00:43:27,553 [ scc.git] DEBUG CHANGELOG.md | 9 ++++++++-
2024-05-19 00:43:27,553 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-)
2024-05-19 00:43:27,938 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:43:27,939 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9'
2024-05-19 00:43:27,947 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:43:27,953 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9'
2024-05-19 00:43:27,974 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js
2024-05-19 00:43:27,974 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-19 00:43:27,978 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +-
2024-05-19 00:43:27,978 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++
2024-05-19 00:43:27,978 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-)
2024-05-19 00:43:28,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:43:28,352 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4a89dc6f0646b38c9c91d5f15003dcabad5c479f'
2024-05-19 00:43:28,361 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:43:28,366 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 475 (Update build and publish in gha) 4a89dc6f0646b38c9c91d5f15003dcabad5c479f'
2024-05-19 00:43:28,384 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-19 00:43:28,386 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 6 +++---
2024-05-19 00:43:28,386 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-)
2024-05-19 00:43:28,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:43:28,765 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-19 00:43:28,809 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:43:28,810 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:43:28,816 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-19 00:43:28,860 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-19 00:43:28,867 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcb386505b0> has no local changes
2024-05-19 00:43:28,867 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-iviewer
Excluded PRs:
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
Already up to date.
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 469 will-moore 'changelog 0.14.0'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 475 will-moore 'Update build and publish in gha'
Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)'
2024-05-19 00:43:28,877 [ scc.git] DEBUG [detached HEAD ee95d53] merge master -Dorg -Ssuccess-only
2024-05-19 00:43:28,878 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:43:28,878 [ scc.repo] DEBUG ## PRs found:
2024-05-19 00:43:29,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None
2024-05-19 00:43:29,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None
2024-05-19 00:43:30,282 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None
2024-05-19 00:43:30,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2024-05-19 00:43:31,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:43:31,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-19 00:43:32,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322 HTTP/1.1" 200 None
2024-05-19 00:43:32,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2
2024-05-19 00:43:32,504 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient'
2024-05-19 00:43:32,504 [ scc.repo] DEBUG ## Branches found:
2024-05-19 00:43:32,504 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2024-05-19 00:43:32,504 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:43:32,505 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:43:32,511 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-19 00:43:32,516 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-19 00:43:32,516 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-19 00:43:32,523 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-19 00:43:32,531 [ scc.git] DEBUG Already up to date.
2024-05-19 00:43:32,532 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head'
2024-05-19 00:43:32,918 [ scc.git] DEBUG From https://github.com/ome/omero-mapr
2024-05-19 00:43:32,918 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD
2024-05-19 00:43:32,923 [ scc.git] DEBUG ## Unique users: []
2024-05-19 00:43:32,923 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:43:32,923 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:43:32,929 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322'
2024-05-19 00:43:32,936 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:43:32,940 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322'
2024-05-19 00:43:32,950 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-19 00:43:32,953 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++
2024-05-19 00:43:32,953 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 ---------------------
2024-05-19 00:43:32,953 [ scc.git] DEBUG requirements.txt | 2 +-
2024-05-19 00:43:32,953 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-)
2024-05-19 00:43:32,953 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html
2024-05-19 00:43:32,953 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html
2024-05-19 00:43:33,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:43:33,130 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-19 00:43:33,172 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:43:33,172 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:43:33,178 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-19 00:43:33,221 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-19 00:43:33,229 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcb3a6a7160> has no local changes
2024-05-19 00:43:33,229 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)'
2024-05-19 00:43:33,239 [ scc.git] DEBUG [detached HEAD b9d0fbc] merge master -Dorg -Ssuccess-only
2024-05-19 00:43:33,239 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:43:33,239 [ scc.repo] DEBUG ## PRs found:
2024-05-19 00:43:33,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None
2024-05-19 00:43:34,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None
2024-05-19 00:43:34,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None
2024-05-19 00:43:35,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2024-05-19 00:43:35,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:43:36,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7 HTTP/1.1" 200 None
2024-05-19 00:43:36,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2
2024-05-19 00:43:36,485 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2024-05-19 00:43:36,937 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None
2024-05-19 00:43:37,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None
2024-05-19 00:43:37,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2024-05-19 00:43:38,278 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:43:38,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102 HTTP/1.1" 200 None
2024-05-19 00:43:39,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2
2024-05-19 00:43:39,180 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2024-05-19 00:43:39,180 [ scc.repo] DEBUG ## Branches found:
2024-05-19 00:43:39,180 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2024-05-19 00:43:39,181 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:43:39,181 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:43:39,186 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-19 00:43:39,191 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-19 00:43:39,191 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-19 00:43:39,198 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-19 00:43:39,204 [ scc.git] DEBUG Already up to date.
2024-05-19 00:43:39,205 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head'
2024-05-19 00:43:39,669 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2024-05-19 00:43:39,670 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD
2024-05-19 00:43:39,676 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head'
2024-05-19 00:43:40,196 [ scc.git] DEBUG From https://github.com/ome/omero-metadata
2024-05-19 00:43:40,197 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD
2024-05-19 00:43:40,201 [ scc.git] DEBUG ## Unique users: []
2024-05-19 00:43:40,201 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:43:40,202 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:43:40,208 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-05-19 00:43:40,214 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:43:40,219 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-05-19 00:43:40,285 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py
2024-05-19 00:43:40,285 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py
2024-05-19 00:43:40,285 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2024-05-19 00:43:40,285 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2024-05-19 00:43:40,285 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-05-19 00:43:40,286 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-05-19 00:43:40,293 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c'
2024-05-19 00:43:40,301 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging
2024-05-19 00:43:40,453 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:43:40,454 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 14f0448a90ccd781126a5c9dc267f4d0a6939102'
2024-05-19 00:43:40,462 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c'
2024-05-19 00:43:40,468 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
Conflicting PR. Removed from build [OMERO-plugins-push#70](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/consoleText) for more details.
Possible conflicts:
- Upstream changes
- src/omero_metadata/cli.py
- src/omero_metadata/populate.py
--conflicts
2024-05-19 00:43:40,474 [ scc.config] DEBUG Found github.token
2024-05-19 00:43:40,474 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts.
2024-05-19 00:43:40,474 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7'
2024-05-19 00:43:40,481 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:43:40,486 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7'
2024-05-19 00:43:40,543 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py
2024-05-19 00:43:40,543 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py
2024-05-19 00:43:40,544 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py
2024-05-19 00:43:40,544 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-05-19 00:43:40,544 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-05-19 00:43:40,551 [ scc.git] DEBUG Calling 'git reset --hard e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c'
2024-05-19 00:43:40,560 [ scc.git] DEBUG HEAD is now at e2fc5ec Merge pull request #85 from sbesson/pytest_logging
2024-05-19 00:43:40,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:43:40,865 [ scc.git] DEBUG Calling 'git merge-base e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c 78e55539b68e351ed5ef202854718b49a37729a7'
2024-05-19 00:43:40,872 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..e2fc5ec5aeb38953ac2a12cb7c980aeee5bf306c'
2024-05-19 00:43:40,878 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
Conflicting PR. Removed from build [OMERO-plugins-push#70](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/consoleText) for more details.
Possible conflicts:
- PR #55 kkoz 'Prevent users from creating columns with python keyword names'
- src/omero_metadata/populate.py
- Upstream changes
- src/omero_metadata/populate.py
--conflicts
2024-05-19 00:43:40,884 [ scc.config] DEBUG Found github.token
2024-05-19 00:43:40,885 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts.
2024-05-19 00:43:40,885 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-19 00:43:40,926 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:43:40,926 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:43:40,933 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-19 00:43:40,976 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-19 00:43:40,988 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcb38650550> has no local changes
2024-05-19 00:43:40,988 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-metadata
Already up to date.
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)'
2024-05-19 00:43:41,000 [ scc.git] DEBUG [detached HEAD e187322] merge master -Dorg -Ssuccess-only
2024-05-19 00:43:41,000 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:43:41,001 [ scc.repo] DEBUG ## PRs found:
2024-05-19 00:43:41,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None
2024-05-19 00:43:41,863 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/131 HTTP/1.1" 200 None
2024-05-19 00:43:41,864 [ scc.repo] DEBUG # ... Include label: dependencies
2024-05-19 00:43:42,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None
2024-05-19 00:43:42,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:43:43,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-19 00:43:43,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/a7d2dc0dc9098294c014cb634e1226fea404721f HTTP/1.1" 200 None
2024-05-19 00:43:44,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/a7d2dc0dc9098294c014cb634e1226fea404721f?per_page=1 HTTP/1.1" 200 2
2024-05-19 00:43:44,239 [ scc.repo] DEBUG - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
2024-05-19 00:43:44,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/129 HTTP/1.1" 200 None
2024-05-19 00:43:44,688 [ scc.repo] DEBUG # ... Include label: dependencies
2024-05-19 00:43:45,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None
2024-05-19 00:43:45,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:43:46,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-19 00:43:46,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/733f52703019d4b6d7e375c121a25c107b64dbec HTTP/1.1" 200 None
2024-05-19 00:43:46,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/733f52703019d4b6d7e375c121a25c107b64dbec?per_page=1 HTTP/1.1" 200 2
2024-05-19 00:43:46,956 [ scc.repo] DEBUG - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
2024-05-19 00:43:47,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/128 HTTP/1.1" 200 None
2024-05-19 00:43:47,436 [ scc.repo] DEBUG # ... Include label: dependencies
2024-05-19 00:43:47,886 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None
2024-05-19 00:43:48,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:43:48,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-19 00:43:49,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/55ca13b67cc0254ed6e1a340952b8741cc54d680 HTTP/1.1" 200 None
2024-05-19 00:43:49,753 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/55ca13b67cc0254ed6e1a340952b8741cc54d680?per_page=1 HTTP/1.1" 200 2
2024-05-19 00:43:49,755 [ scc.repo] DEBUG - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
2024-05-19 00:43:50,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None
2024-05-19 00:43:50,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None
2024-05-19 00:43:51,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None
2024-05-19 00:43:51,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None
2024-05-19 00:43:52,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None
2024-05-19 00:43:52,585 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None
2024-05-19 00:43:52,588 [ scc.repo] DEBUG ## Branches found:
2024-05-19 00:43:52,588 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2024-05-19 00:43:52,588 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:43:52,588 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:43:52,595 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-19 00:43:52,600 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-19 00:43:52,600 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-19 00:43:52,605 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-19 00:43:52,610 [ scc.git] DEBUG Already up to date.
2024-05-19 00:43:52,610 [ scc.git] DEBUG Calling 'git fetch origin pull/128/head'
2024-05-19 00:43:52,986 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2024-05-19 00:43:52,986 [ scc.git] DEBUG * branch refs/pull/128/head -> FETCH_HEAD
2024-05-19 00:43:52,991 [ scc.git] DEBUG Calling 'git fetch origin pull/129/head'
2024-05-19 00:43:53,376 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2024-05-19 00:43:53,376 [ scc.git] DEBUG * branch refs/pull/129/head -> FETCH_HEAD
2024-05-19 00:43:53,382 [ scc.git] DEBUG Calling 'git fetch origin pull/131/head'
2024-05-19 00:43:53,775 [ scc.git] DEBUG From https://github.com/ome/omero-parade
2024-05-19 00:43:53,776 [ scc.git] DEBUG * branch refs/pull/131/head -> FETCH_HEAD
2024-05-19 00:43:53,780 [ scc.git] DEBUG ## Unique users: []
2024-05-19 00:43:53,780 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:43:53,780 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:43:53,786 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...55ca13b67cc0254ed6e1a340952b8741cc54d680'
2024-05-19 00:43:53,793 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:43:53,799 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 128 (Bump postcss from 8.4.21 to 8.4.31) 55ca13b67cc0254ed6e1a340952b8741cc54d680'
2024-05-19 00:43:53,810 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-19 00:43:53,813 [ scc.git] DEBUG package-lock.json | 12 ++++++++----
2024-05-19 00:43:53,813 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 4 deletions(-)
2024-05-19 00:43:53,975 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:43:53,976 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...733f52703019d4b6d7e375c121a25c107b64dbec'
2024-05-19 00:43:53,986 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:43:53,994 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 129 (Bump @babel/traverse from 7.21.4 to 7.23.2) 733f52703019d4b6d7e375c121a25c107b64dbec'
2024-05-19 00:43:54,006 [ scc.git] DEBUG Auto-merging package-lock.json
2024-05-19 00:43:54,006 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-19 00:43:54,009 [ scc.git] DEBUG package-lock.json | 121 +++++++++++++++++++++++++++---------------------------
2024-05-19 00:43:54,009 [ scc.git] DEBUG 1 file changed, 61 insertions(+), 60 deletions(-)
2024-05-19 00:43:54,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:43:54,388 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a7d2dc0dc9098294c014cb634e1226fea404721f'
2024-05-19 00:43:54,394 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:43:54,399 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 131 (Bump axios from 1.3.5 to 1.6.0) a7d2dc0dc9098294c014cb634e1226fea404721f'
2024-05-19 00:43:54,437 [ scc.git] DEBUG Auto-merging package-lock.json
2024-05-19 00:43:54,438 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-19 00:43:54,441 [ scc.git] DEBUG package-lock.json | 8 ++++----
2024-05-19 00:43:54,441 [ scc.git] DEBUG package.json | 2 +-
2024-05-19 00:43:54,441 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 5 deletions(-)
2024-05-19 00:43:54,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:43:54,803 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-19 00:43:54,848 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:43:54,849 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:43:54,856 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-19 00:43:54,896 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-19 00:43:54,904 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcb3a698fd0> has no local changes
2024-05-19 00:43:54,904 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-parade
Excluded PRs:
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
- PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
- PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)'
2024-05-19 00:43:54,913 [ scc.git] DEBUG [detached HEAD a013f3d] merge master -Dorg -Ssuccess-only
2024-05-19 00:43:54,913 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:43:54,914 [ scc.repo] DEBUG ## PRs found:
2024-05-19 00:43:55,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None
2024-05-19 00:43:55,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/14 HTTP/1.1" 200 None
2024-05-19 00:43:56,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None
2024-05-19 00:43:56,643 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:43:57,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/fb7700b8eb4b753884260b7921e65b58b29f954e HTTP/1.1" 200 None
2024-05-19 00:43:57,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/fb7700b8eb4b753884260b7921e65b58b29f954e?per_page=1 HTTP/1.1" 200 2
2024-05-19 00:43:57,540 [ scc.repo] DEBUG - PR 14 jburel 'use conda-forge channel'
2024-05-19 00:43:57,540 [ scc.repo] DEBUG ## Branches found:
2024-05-19 00:43:57,540 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2024-05-19 00:43:57,540 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:43:57,541 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:43:57,547 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-19 00:43:57,553 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-19 00:43:57,553 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-19 00:43:57,558 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-19 00:43:57,564 [ scc.git] DEBUG Already up to date.
2024-05-19 00:43:57,564 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2024-05-19 00:43:57,942 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools
2024-05-19 00:43:57,942 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2024-05-19 00:43:57,947 [ scc.git] DEBUG ## Unique users: []
2024-05-19 00:43:57,947 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:43:57,947 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:43:57,954 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fb7700b8eb4b753884260b7921e65b58b29f954e'
2024-05-19 00:43:57,961 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:43:57,966 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (use conda-forge channel) fb7700b8eb4b753884260b7921e65b58b29f954e'
2024-05-19 00:43:57,976 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-19 00:43:58,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:43:58,142 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-19 00:43:58,184 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:43:58,184 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:43:58,190 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-19 00:43:58,230 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-19 00:43:58,237 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcb3861a340> has no local changes
2024-05-19 00:43:58,238 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-prometheus-tools
Already up to date.
Merged PRs:
- PR 14 jburel 'use conda-forge channel'
Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)'
2024-05-19 00:43:58,246 [ scc.git] DEBUG [detached HEAD bf3292f] merge master -Dorg -Ssuccess-only
2024-05-19 00:43:58,246 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:43:58,247 [ scc.repo] DEBUG ## PRs found:
2024-05-19 00:43:58,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None
2024-05-19 00:43:59,151 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/28 HTTP/1.1" 200 None
2024-05-19 00:43:59,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6 HTTP/1.1" 200 None
2024-05-19 00:44:00,077 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/6/comments HTTP/1.1" 200 None
2024-05-19 00:44:00,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None
2024-05-19 00:44:00,962 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:44:01,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/commits/20757563a49aa42b99a0c43176f6ef747e965b61 HTTP/1.1" 200 None
2024-05-19 00:44:01,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/statuses/20757563a49aa42b99a0c43176f6ef747e965b61?per_page=1 HTTP/1.1" 200 2
2024-05-19 00:44:01,822 [ scc.repo] DEBUG - PR 6 dominikl 'Add method to create masks grouped by label id'
2024-05-19 00:44:01,822 [ scc.repo] DEBUG ## Branches found:
2024-05-19 00:44:01,822 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2024-05-19 00:44:01,822 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:44:01,822 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:44:01,829 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-19 00:44:01,834 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-19 00:44:01,835 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-19 00:44:01,840 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-19 00:44:01,846 [ scc.git] DEBUG Already up to date.
2024-05-19 00:44:01,846 [ scc.git] DEBUG Calling 'git fetch origin pull/6/head'
2024-05-19 00:44:02,347 [ scc.git] DEBUG From https://github.com/ome/omero-rois
2024-05-19 00:44:02,347 [ scc.git] DEBUG * branch refs/pull/6/head -> FETCH_HEAD
2024-05-19 00:44:02,352 [ scc.git] DEBUG ## Unique users: []
2024-05-19 00:44:02,352 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:44:02,353 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:44:02,359 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20757563a49aa42b99a0c43176f6ef747e965b61'
2024-05-19 00:44:02,367 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:44:02,374 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 6 (Add method to create masks grouped by label id) 20757563a49aa42b99a0c43176f6ef747e965b61'
2024-05-19 00:44:02,383 [ scc.git] DEBUG Auto-merging src/omero_rois/library.py
2024-05-19 00:44:02,384 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-19 00:44:02,386 [ scc.git] DEBUG src/omero_rois/library.py | 33 +++++++++++++++++++++++++++++++++
2024-05-19 00:44:02,386 [ scc.git] DEBUG 1 file changed, 33 insertions(+)
2024-05-19 00:44:02,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:44:02,544 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-19 00:44:02,584 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:44:02,584 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:44:02,591 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-19 00:44:02,635 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-19 00:44:02,642 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcb386415b0> has no local changes
2024-05-19 00:44:02,642 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-rois
Excluded PRs:
- PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 6 dominikl 'Add method to create masks grouped by label id'
Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)'
2024-05-19 00:44:02,651 [ scc.git] DEBUG [detached HEAD f29b2fb] merge master -Dorg -Ssuccess-only
2024-05-19 00:44:02,652 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:44:02,652 [ scc.repo] DEBUG ## PRs found:
2024-05-19 00:44:03,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None
2024-05-19 00:44:03,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None
2024-05-19 00:44:03,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None
2024-05-19 00:44:04,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2024-05-19 00:44:04,897 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:44:05,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d HTTP/1.1" 200 None
2024-05-19 00:44:05,811 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2
2024-05-19 00:44:05,812 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)'
2024-05-19 00:44:05,812 [ scc.repo] DEBUG ## Branches found:
2024-05-19 00:44:05,812 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2024-05-19 00:44:05,812 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:44:05,812 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:44:05,820 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-19 00:44:05,828 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-19 00:44:05,828 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-19 00:44:05,835 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-19 00:44:05,841 [ scc.git] DEBUG Already up to date.
2024-05-19 00:44:05,841 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head'
2024-05-19 00:44:06,222 [ scc.git] DEBUG From https://github.com/ome/omero-signup
2024-05-19 00:44:06,222 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD
2024-05-19 00:44:06,227 [ scc.git] DEBUG ## Unique users: []
2024-05-19 00:44:06,227 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:44:06,227 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:44:06,234 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-05-19 00:44:06,240 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:44:06,251 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-05-19 00:44:06,298 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py
2024-05-19 00:44:06,298 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py
2024-05-19 00:44:06,298 [ scc.git] DEBUG Auto-merging omero_signup/urls.py
2024-05-19 00:44:06,298 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py
2024-05-19 00:44:06,299 [ scc.git] DEBUG Auto-merging omero_signup/views.py
2024-05-19 00:44:06,299 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py
2024-05-19 00:44:06,299 [ scc.git] DEBUG Auto-merging setup.py
2024-05-19 00:44:06,299 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py
2024-05-19 00:44:06,299 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-05-19 00:44:06,299 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-05-19 00:44:06,306 [ scc.git] DEBUG Calling 'git reset --hard c8610dba25f39870a09fa5401c735fb3be85a319'
2024-05-19 00:44:06,313 [ scc.git] DEBUG HEAD is now at c8610db Bump version: 0.3.3 → 0.3.4.dev0
2024-05-19 00:44:06,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:44:06,469 [ scc.git] DEBUG Calling 'git merge-base c8610dba25f39870a09fa5401c735fb3be85a319 b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d'
2024-05-19 00:44:06,476 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..c8610dba25f39870a09fa5401c735fb3be85a319'
2024-05-19 00:44:06,483 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
Conflicting PR. Removed from build [OMERO-plugins-push#70](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_signup/signup_settings.py
- omero_signup/urls.py
- omero_signup/views.py
- setup.py
--conflicts
2024-05-19 00:44:06,488 [ scc.config] DEBUG Found github.token
2024-05-19 00:44:06,489 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts.
2024-05-19 00:44:06,489 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-19 00:44:06,532 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:44:06,532 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:44:06,540 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-19 00:44:06,582 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-19 00:44:06,589 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcb3a6afe80> has no local changes
2024-05-19 00:44:06,589 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-signup
Already up to date.
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)'
2024-05-19 00:44:06,599 [ scc.git] DEBUG [detached HEAD 67bb142] merge master -Dorg -Ssuccess-only
2024-05-19 00:44:06,599 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:44:06,600 [ scc.repo] DEBUG ## PRs found:
2024-05-19 00:44:06,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None
2024-05-19 00:44:07,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12 HTTP/1.1" 200 None
2024-05-19 00:44:07,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/12/comments HTTP/1.1" 200 None
2024-05-19 00:44:08,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2024-05-19 00:44:08,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:44:09,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/425319051224e8481afc40083fd9b5db4bc99928 HTTP/1.1" 200 None
2024-05-19 00:44:09,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/425319051224e8481afc40083fd9b5db4bc99928?per_page=1 HTTP/1.1" 200 2
2024-05-19 00:44:09,676 [ scc.repo] DEBUG - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2024-05-19 00:44:09,676 [ scc.repo] DEBUG ## Branches found:
2024-05-19 00:44:09,676 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2024-05-19 00:44:09,676 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:44:09,677 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:44:09,682 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-19 00:44:09,688 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-19 00:44:09,689 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-19 00:44:09,695 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-19 00:44:09,701 [ scc.git] DEBUG Already up to date.
2024-05-19 00:44:09,701 [ scc.git] DEBUG Calling 'git fetch origin pull/12/head'
2024-05-19 00:44:10,142 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra
2024-05-19 00:44:10,143 [ scc.git] DEBUG * branch refs/pull/12/head -> FETCH_HEAD
2024-05-19 00:44:10,148 [ scc.git] DEBUG ## Unique users: []
2024-05-19 00:44:10,148 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:44:10,148 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:44:10,154 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...425319051224e8481afc40083fd9b5db4bc99928'
2024-05-19 00:44:10,160 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:44:10,165 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 12 (IDR: use downloaded ansible templates & variables to configure infra) 425319051224e8481afc40083fd9b5db4bc99928'
2024-05-19 00:44:10,238 [ scc.git] DEBUG Merge made by the 'ort' strategy.
2024-05-19 00:44:10,241 [ scc.git] DEBUG idr-compose.yml | 66 ++++++++++++++
2024-05-19 00:44:10,241 [ scc.git] DEBUG idr-haproxy.yml | 58 +++++++++++++
2024-05-19 00:44:10,241 [ scc.git] DEBUG idr/40-ansible.sh | 7 ++
2024-05-19 00:44:10,241 [ scc.git] DEBUG idr/70-reset-password.sh | 1 +
2024-05-19 00:44:10,241 [ scc.git] DEBUG idr/nginx/conf.d/default.conf | 1 +
2024-05-19 00:44:10,241 [ scc.git] DEBUG idr/nginx/conf.d/example_ssl.conf | 1 +
2024-05-19 00:44:10,241 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cache.conf | 53 +++++++++++
2024-05-19 00:44:10,241 [ scc.git] DEBUG idr/nginx/conf.d/proxy-cachebuster.conf | 114 ++++++++++++++++++++++++
2024-05-19 00:44:10,241 [ scc.git] DEBUG idr/nginx/conf.d/proxy-default.conf | 135 +++++++++++++++++++++++++++++
2024-05-19 00:44:10,242 [ scc.git] DEBUG idr/nginx/conf.d/proxy-omeroreadwrite.conf | 115 ++++++++++++++++++++++++
2024-05-19 00:44:10,242 [ scc.git] DEBUG idr/nginx/conf.d/proxy-redirect.conf | 15 ++++
2024-05-19 00:44:10,243 [ scc.git] DEBUG idr/nginx/conf.d/proxy-upstream.conf | 13 +++
2024-05-19 00:44:10,244 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v0.conf | 26 ++++++
2024-05-19 00:44:10,244 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v1.conf | 30 +++++++
2024-05-19 00:44:10,244 [ scc.git] DEBUG idr/nginx/conf.d/proxy-v2.conf | 30 +++++++
2024-05-19 00:44:10,244 [ scc.git] DEBUG idr/nginx/conf.d/proxy-websockets.conf | 6 ++
2024-05-19 00:44:10,244 [ scc.git] DEBUG idr/nginx/nginx.conf | 53 +++++++++++
2024-05-19 00:44:10,245 [ scc.git] DEBUG idr/omero/Dockerfile | 3 +
2024-05-19 00:44:10,245 [ scc.git] DEBUG idr/omero/playbook.yml | 41 +++++++++
2024-05-19 00:44:10,245 [ scc.git] DEBUG idr/redirect/Dockerfile | 6 ++
2024-05-19 00:44:10,245 [ scc.git] DEBUG idr/web/Dockerfile | 5 ++
2024-05-19 00:44:10,245 [ scc.git] DEBUG idr/web/playbook.yml | 45 ++++++++++
2024-05-19 00:44:10,245 [ scc.git] DEBUG 22 files changed, 824 insertions(+)
2024-05-19 00:44:10,245 [ scc.git] DEBUG create mode 100644 idr-compose.yml
2024-05-19 00:44:10,245 [ scc.git] DEBUG create mode 100644 idr-haproxy.yml
2024-05-19 00:44:10,245 [ scc.git] DEBUG create mode 100755 idr/40-ansible.sh
2024-05-19 00:44:10,245 [ scc.git] DEBUG create mode 100755 idr/70-reset-password.sh
2024-05-19 00:44:10,245 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/default.conf
2024-05-19 00:44:10,245 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/example_ssl.conf
2024-05-19 00:44:10,245 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cache.conf
2024-05-19 00:44:10,245 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-cachebuster.conf
2024-05-19 00:44:10,245 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-default.conf
2024-05-19 00:44:10,245 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-omeroreadwrite.conf
2024-05-19 00:44:10,245 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-redirect.conf
2024-05-19 00:44:10,245 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-upstream.conf
2024-05-19 00:44:10,245 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v0.conf
2024-05-19 00:44:10,245 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v1.conf
2024-05-19 00:44:10,245 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-v2.conf
2024-05-19 00:44:10,245 [ scc.git] DEBUG create mode 100644 idr/nginx/conf.d/proxy-websockets.conf
2024-05-19 00:44:10,245 [ scc.git] DEBUG create mode 100644 idr/nginx/nginx.conf
2024-05-19 00:44:10,245 [ scc.git] DEBUG create mode 100644 idr/omero/Dockerfile
2024-05-19 00:44:10,245 [ scc.git] DEBUG create mode 100644 idr/omero/playbook.yml
2024-05-19 00:44:10,246 [ scc.git] DEBUG create mode 100644 idr/redirect/Dockerfile
2024-05-19 00:44:10,246 [ scc.git] DEBUG create mode 100644 idr/web/Dockerfile
2024-05-19 00:44:10,246 [ scc.git] DEBUG create mode 100644 idr/web/playbook.yml
2024-05-19 00:44:10,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:44:10,401 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-19 00:44:10,443 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:44:10,444 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:44:10,449 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-19 00:44:10,492 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-19 00:44:10,499 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcb3a698df0> has no local changes
2024-05-19 00:44:10,500 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-test-infra
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)'
2024-05-19 00:44:10,508 [ scc.git] DEBUG [detached HEAD a12ecdf] merge master -Dorg -Ssuccess-only
2024-05-19 00:44:10,509 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:44:10,509 [ scc.repo] DEBUG ## PRs found:
2024-05-19 00:44:10,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 2
2024-05-19 00:44:10,818 [ scc.repo] DEBUG ## Branches found:
2024-05-19 00:44:10,819 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2024-05-19 00:44:10,819 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:44:10,819 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:44:10,825 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-19 00:44:10,830 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-19 00:44:10,830 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-19 00:44:10,836 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-19 00:44:10,842 [ scc.git] DEBUG Already up to date.
2024-05-19 00:44:10,843 [ scc.git] DEBUG ## Unique users: []
2024-05-19 00:44:10,843 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:44:10,843 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:44:10,848 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-19 00:44:10,890 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:44:10,890 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:44:10,896 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-19 00:44:10,939 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-19 00:44:10,946 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcb3866ffa0> has no local changes
2024-05-19 00:44:10,946 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-upload
Already up to date.
Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)'
2024-05-19 00:44:10,956 [ scc.git] DEBUG [detached HEAD 670c9ca] merge master -Dorg -Ssuccess-only
2024-05-19 00:44:10,956 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:44:10,956 [ scc.repo] DEBUG ## PRs found:
2024-05-19 00:44:11,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 2
2024-05-19 00:44:11,255 [ scc.repo] DEBUG ## Branches found:
2024-05-19 00:44:11,256 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2024-05-19 00:44:11,256 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:44:11,256 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:44:11,263 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-19 00:44:11,269 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-19 00:44:11,269 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-19 00:44:11,276 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-19 00:44:11,282 [ scc.git] DEBUG Already up to date.
2024-05-19 00:44:11,282 [ scc.git] DEBUG ## Unique users: []
2024-05-19 00:44:11,282 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:44:11,282 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:44:11,288 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-19 00:44:11,330 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:44:11,330 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:44:11,337 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-19 00:44:11,379 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-19 00:44:11,386 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcb3860df70> has no local changes
2024-05-19 00:44:11,386 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-virtual-microscope
Already up to date.
Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)'
2024-05-19 00:44:11,394 [ scc.git] DEBUG [detached HEAD 1f772db] merge master -Dorg -Ssuccess-only
2024-05-19 00:44:11,395 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:44:11,395 [ scc.git] INFO Overriding base-branch from master to main
2024-05-19 00:44:11,395 [ scc.repo] DEBUG ## PRs found:
2024-05-19 00:44:11,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None
2024-05-19 00:44:12,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None
2024-05-19 00:44:12,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None
2024-05-19 00:44:13,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None
2024-05-19 00:44:13,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2024-05-19 00:44:14,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:44:14,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-05-19 00:44:14,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8 HTTP/1.1" 200 None
2024-05-19 00:44:15,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2
2024-05-19 00:44:15,410 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2024-05-19 00:44:15,411 [ scc.repo] DEBUG ## Branches found:
2024-05-19 00:44:15,411 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2024-05-19 00:44:15,411 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:44:15,411 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:44:15,418 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main'
2024-05-19 00:44:15,423 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-19 00:44:15,423 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main'
2024-05-19 00:44:15,427 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main'
2024-05-19 00:44:15,432 [ scc.git] DEBUG Already up to date.
2024-05-19 00:44:15,433 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head'
2024-05-19 00:44:15,809 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr
2024-05-19 00:44:15,809 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD
2024-05-19 00:44:15,814 [ scc.git] DEBUG ## Unique users: []
2024-05-19 00:44:15,814 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:44:15,814 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:44:15,821 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-05-19 00:44:15,826 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:44:15,831 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-05-19 00:44:15,856 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py
2024-05-19 00:44:15,857 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py
2024-05-19 00:44:15,857 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-05-19 00:44:15,857 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-05-19 00:44:15,864 [ scc.git] DEBUG Calling 'git reset --hard 67bb245b8b08709e04a8bf52b02de2298a029a94'
2024-05-19 00:44:15,873 [ scc.git] DEBUG HEAD is now at 67bb245 Bump version: 0.1.1 → 0.1.2.dev0
2024-05-19 00:44:16,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:44:16,038 [ scc.git] DEBUG Calling 'git merge-base 67bb245b8b08709e04a8bf52b02de2298a029a94 85cf4c893f393da6763bf4cee2a308832a41a9e8'
2024-05-19 00:44:16,044 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..67bb245b8b08709e04a8bf52b02de2298a029a94'
2024-05-19 00:44:16,050 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Conflicting PR. Removed from build [OMERO-plugins-push#70](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero_web_zarr/urls.py
--conflicts
2024-05-19 00:44:16,055 [ scc.config] DEBUG Found github.token
2024-05-19 00:44:16,055 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts.
2024-05-19 00:44:16,056 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-19 00:44:16,094 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:44:16,094 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:44:16,099 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-19 00:44:16,137 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-19 00:44:16,144 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcb385f2190> has no local changes
2024-05-19 00:44:16,145 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)'
2024-05-19 00:44:16,152 [ scc.git] DEBUG [detached HEAD 3d57beb] merge master -Dorg -Ssuccess-only
2024-05-19 00:44:16,153 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:44:16,153 [ scc.repo] DEBUG ## PRs found:
2024-05-19 00:44:16,466 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 2
2024-05-19 00:44:16,467 [ scc.repo] DEBUG ## Branches found:
2024-05-19 00:44:16,467 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2024-05-19 00:44:16,467 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:44:16,467 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:44:16,474 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-19 00:44:16,479 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-19 00:44:16,479 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-19 00:44:16,484 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-19 00:44:16,489 [ scc.git] DEBUG Already up to date.
2024-05-19 00:44:16,489 [ scc.git] DEBUG ## Unique users: []
2024-05-19 00:44:16,490 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:44:16,490 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:44:16,494 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-19 00:44:16,530 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:44:16,530 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:44:16,536 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-19 00:44:16,579 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-19 00:44:16,586 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcb38617e50> has no local changes
2024-05-19 00:44:16,586 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-weberror
Already up to date.
Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)'
2024-05-19 00:44:16,595 [ scc.git] DEBUG [detached HEAD 2bfc09e] merge master -Dorg -Ssuccess-only
2024-05-19 00:44:16,595 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:44:16,595 [ scc.repo] DEBUG ## PRs found:
2024-05-19 00:44:16,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 2
2024-05-19 00:44:16,902 [ scc.repo] DEBUG ## Branches found:
2024-05-19 00:44:16,902 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2024-05-19 00:44:16,902 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:44:16,902 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:44:16,908 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-19 00:44:16,915 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-19 00:44:16,915 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-19 00:44:16,921 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-19 00:44:16,926 [ scc.git] DEBUG Already up to date.
2024-05-19 00:44:16,926 [ scc.git] DEBUG ## Unique users: []
2024-05-19 00:44:16,926 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:44:16,926 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:44:16,931 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-19 00:44:16,974 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:44:16,974 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:44:16,980 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-19 00:44:17,024 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-19 00:44:17,031 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcb3853a940> has no local changes
2024-05-19 00:44:17,031 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: openmicroscopy/omero-webtest
Already up to date.
Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)'
2024-05-19 00:44:17,038 [ scc.git] DEBUG [detached HEAD d340aa8] merge master -Dorg -Ssuccess-only
2024-05-19 00:44:17,039 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:44:17,039 [ scc.repo] DEBUG ## PRs found:
2024-05-19 00:44:17,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 None
2024-05-19 00:44:17,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100 HTTP/1.1" 200 None
2024-05-19 00:44:18,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/issues/100/comments HTTP/1.1" 200 None
2024-05-19 00:44:18,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2024-05-19 00:44:19,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:44:19,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/commits/b4abacf0cb9b7aee150761d320bdbb80762cd6e7 HTTP/1.1" 200 None
2024-05-19 00:44:20,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/statuses/b4abacf0cb9b7aee150761d320bdbb80762cd6e7?per_page=1 HTTP/1.1" 200 2
2024-05-19 00:44:20,129 [ scc.repo] DEBUG - PR 100 dominikl 'Run tests properly'
2024-05-19 00:44:20,129 [ scc.repo] DEBUG ## Branches found:
2024-05-19 00:44:20,129 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2024-05-19 00:44:20,129 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:44:20,129 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:44:20,137 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-05-19 00:44:20,143 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-19 00:44:20,144 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-05-19 00:44:20,149 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-05-19 00:44:20,156 [ scc.git] DEBUG Already up to date.
2024-05-19 00:44:20,156 [ scc.git] DEBUG Calling 'git fetch origin pull/100/head'
2024-05-19 00:44:20,552 [ scc.git] DEBUG From https://github.com/ome/rOMERO-gateway
2024-05-19 00:44:20,552 [ scc.git] DEBUG * branch refs/pull/100/head -> FETCH_HEAD
2024-05-19 00:44:20,557 [ scc.git] DEBUG ## Unique users: []
2024-05-19 00:44:20,557 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:44:20,557 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:44:20,565 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-05-19 00:44:20,571 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:44:20,575 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 100 (Run tests properly) b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-05-19 00:44:20,616 [ scc.git] DEBUG Auto-merging Dockerfile
2024-05-19 00:44:20,616 [ scc.git] DEBUG CONFLICT (content): Merge conflict in Dockerfile
2024-05-19 00:44:20,616 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-05-19 00:44:20,616 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-05-19 00:44:20,623 [ scc.git] DEBUG Calling 'git reset --hard 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2024-05-19 00:44:20,631 [ scc.git] DEBUG HEAD is now at 7b5d64d Merge pull request #106 from dominikl/add_examples_2
2024-05-19 00:44:20,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:44:20,798 [ scc.git] DEBUG Calling 'git merge-base 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 b4abacf0cb9b7aee150761d320bdbb80762cd6e7'
2024-05-19 00:44:20,807 [ scc.git] DEBUG Calling 'git diff --name-only 8b424d2d21f70d07729c4da38a9241b9a9f483be..7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9'
2024-05-19 00:44:20,812 [ scc.git] INFO - PR 100 dominikl 'Run tests properly'
Conflicting PR. Removed from build [OMERO-plugins-push#70](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/consoleText) for more details.
Possible conflicts:
- Upstream changes
- Dockerfile
--conflicts
2024-05-19 00:44:20,816 [ scc.config] DEBUG Found github.token
2024-05-19 00:44:20,816 [ scc.git] DEBUG Not adding comment to issue #100, already --conflicts.
2024-05-19 00:44:20,817 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-19 00:44:20,856 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:44:20,856 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:44:20,862 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-19 00:44:20,904 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-19 00:44:20,912 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcb385a49d0> has no local changes
2024-05-19 00:44:20,912 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)'
2024-05-19 00:44:20,922 [ scc.git] DEBUG [detached HEAD da1aaa9] merge master -Dorg -Ssuccess-only
2024-05-19 00:44:20,922 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:44:20,923 [ scc.git] INFO Overriding base-branch from master to develop
2024-05-19 00:44:20,923 [ scc.repo] DEBUG ## PRs found:
2024-05-19 00:44:21,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-05-19 00:44:21,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-05-19 00:44:22,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-05-19 00:44:22,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-05-19 00:44:23,204 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-05-19 00:44:23,659 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-05-19 00:44:24,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-05-19 00:44:24,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-05-19 00:44:24,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-05-19 00:44:25,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-05-19 00:44:25,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-05-19 00:44:25,842 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-05-19 00:44:26,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-05-19 00:44:26,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-05-19 00:44:27,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-05-19 00:44:27,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-05-19 00:44:27,918 [ scc.repo] DEBUG ## Branches found:
2024-05-19 00:44:27,918 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2024-05-19 00:44:27,918 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:44:27,918 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:44:27,927 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-05-19 00:44:27,932 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-05-19 00:44:27,932 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-05-19 00:44:27,937 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-05-19 00:44:27,942 [ scc.git] DEBUG Already up to date.
2024-05-19 00:44:27,943 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-05-19 00:44:28,376 [ scc.git] DEBUG From https://github.com/ome/scripts
2024-05-19 00:44:28,377 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD
2024-05-19 00:44:28,382 [ scc.git] DEBUG ## Unique users: []
2024-05-19 00:44:28,382 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:44:28,382 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:44:28,388 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-05-19 00:44:28,394 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:44:28,398 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-05-19 00:44:28,458 [ scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-05-19 00:44:28,458 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-05-19 00:44:28,458 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-05-19 00:44:28,459 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-05-19 00:44:28,466 [ scc.git] DEBUG Calling 'git reset --hard 5a908933161233015332dd416c325c60c5b8bd3a'
2024-05-19 00:44:28,473 [ scc.git] DEBUG HEAD is now at 5a90893 Bump version: 5.8.2 → 5.8.3.dev0
2024-05-19 00:44:28,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:44:28,641 [ scc.git] DEBUG Calling 'git merge-base 5a908933161233015332dd416c325c60c5b8bd3a 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-05-19 00:44:28,650 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..5a908933161233015332dd416c325c60c5b8bd3a'
2024-05-19 00:44:28,657 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-plugins-push#70](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/consoleText) for more details.
Possible conflicts:
- Upstream changes
- omero/annotation_scripts/KeyVal_to_csv.py
--conflicts
2024-05-19 00:44:28,663 [ scc.config] DEBUG Found github.token
2024-05-19 00:44:28,663 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-05-19 00:44:28,663 [ scc.git] DEBUG Calling 'git submodule update'
2024-05-19 00:44:28,706 [ scc.git] DEBUG Get sha1 of %s
2024-05-19 00:44:28,706 [ scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-05-19 00:44:28,713 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-19 00:44:28,756 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-19 00:44:28,764 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcb3853abb0> has no local changes
2024-05-19 00:44:28,764 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)'
2024-05-19 00:44:28,773 [ scc.git] DEBUG [detached HEAD 33a5c28] merge master -Dorg -Ssuccess-only
2024-05-19 00:44:28,774 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:44:28,774 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-05-19 00:44:28,856 [ scc.config] DEBUG Found submodule.minimal-omero-client.url
2024-05-19 00:44:29,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:44:29,063 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch
2024-05-19 00:44:29,067 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url
2024-05-19 00:44:29,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:44:29,478 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch
2024-05-19 00:44:29,484 [ scc.config] DEBUG Found submodule.omero-cli-render.url
2024-05-19 00:44:29,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:44:29,896 [ scc.config] DEBUG Found submodule.omero-cli-render.branch
2024-05-19 00:44:29,902 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url
2024-05-19 00:44:30,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:44:30,309 [ scc.config] DEBUG Found submodule.omero-figure.url
2024-05-19 00:44:30,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:44:30,715 [ scc.config] DEBUG Found submodule.omero-figure.branch
2024-05-19 00:44:30,719 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url
2024-05-19 00:44:31,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:44:31,118 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch
2024-05-19 00:44:31,124 [ scc.config] DEBUG Found submodule.omero-gallery.url
2024-05-19 00:44:31,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:44:31,542 [ scc.config] DEBUG Found submodule.omero-gallery.branch
2024-05-19 00:44:31,547 [ scc.config] DEBUG Found submodule.omero-iviewer.url
2024-05-19 00:44:31,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:44:32,004 [ scc.config] DEBUG Found submodule.omero-iviewer.branch
2024-05-19 00:44:32,010 [ scc.config] DEBUG Found submodule.omero-mapr.url
2024-05-19 00:44:32,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:44:32,413 [ scc.config] DEBUG Found submodule.omero-mapr.branch
2024-05-19 00:44:32,419 [ scc.config] DEBUG Found submodule.omero-metadata.url
2024-05-19 00:44:32,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:44:32,823 [ scc.config] DEBUG Found submodule.omero-metadata.branch
2024-05-19 00:44:32,828 [ scc.config] DEBUG Found submodule.omero-parade.url
2024-05-19 00:44:33,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:44:33,245 [ scc.config] DEBUG Found submodule.omero-parade.branch
2024-05-19 00:44:33,250 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url
2024-05-19 00:44:33,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:44:33,658 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch
2024-05-19 00:44:33,663 [ scc.config] DEBUG Found submodule.omero-rois.url
2024-05-19 00:44:34,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:44:34,074 [ scc.config] DEBUG Found submodule.omero-signup.url
2024-05-19 00:44:34,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:44:34,482 [ scc.config] DEBUG Found submodule.omero-test-infra.url
2024-05-19 00:44:34,879 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:44:34,893 [ scc.config] DEBUG Found submodule.omero-test-infra.branch
2024-05-19 00:44:34,898 [ scc.config] DEBUG Found submodule.omero-upload.url
2024-05-19 00:44:35,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:44:35,310 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url
2024-05-19 00:44:35,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:44:35,720 [ scc.config] DEBUG Found submodule.omero-web-zarr.url
2024-05-19 00:44:36,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:44:36,123 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch
2024-05-19 00:44:36,129 [ scc.config] DEBUG Found submodule.omero-weberror.url
2024-05-19 00:44:36,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:44:36,526 [ scc.config] DEBUG Found submodule.omero-weberror.branch
2024-05-19 00:44:36,533 [ scc.config] DEBUG Found submodule.omero-webtest.url
2024-05-19 00:44:36,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:44:36,932 [ scc.config] DEBUG Found submodule.omero-webtest.branch
2024-05-19 00:44:36,938 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url
2024-05-19 00:44:37,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:44:37,338 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch
2024-05-19 00:44:37,343 [ scc.config] DEBUG Found submodule.scripts.url
2024-05-19 00:44:37,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-05-19 00:44:37,757 [ scc.config] DEBUG Found submodule.scripts.branch
2024-05-19 00:44:37,758 [ scc.git] DEBUG Calling 'git status --porcelain'
2024-05-19 00:44:37,843 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fcb3b839ac0> has local changes
2024-05-19 00:44:37,843 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only
Repository: ome/omero-plugins
Already up to date.
Repository: ome/minimal-omero-client
Already up to date.
Repository: ome/omero-cli-duplicate
Excluded PRs:
- PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
Already up to date.
Merged PRs:
- PR 25 jburel 'review message'
Repository: ome/omero-cli-render
Excluded PRs:
- PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft)
- PR 54 dominikl 'Change rendering settings spec' (stage: draft)
- PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
- PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft)
Already up to date.
Merged PRs:
- PR 59 will-moore 'Apply settings to Plate'
Repository: ome/omero-cli-zarr
Excluded PRs:
- PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
- PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft)
Already up to date.
Merged PRs:
- PR 147 will-moore 'Name option'
Conflicting PRs (not included):
- PR 102 will-moore 'Zarr export tests'
- PR 123 will-moore 'Support export of Fileset:ID'
Repository: ome/omero-figure
Excluded PRs:
- PR 560 will-moore 'Max projection bytes' (status: failure)
- PR 543 will-moore 'Plate well labels' (stage: draft)
Already up to date.
Merged PRs:
- PR 549 will-moore 'Inset feature'
- PR 555 will-moore 'Points in shape editor'
- PR 562 will-moore 'Add changelog 7.0.0'
Repository: ome/omero-fpbioimage
Already up to date.
Merged PRs:
- PR 18 jburel 'default size z value'
Repository: ome/omero-gallery
Already up to date.
Merged PRs:
- PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2'
Repository: ome/omero-iviewer
Excluded PRs:
- PR 420 will-moore 'Add release process to README' (exclude comment)
- PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
Already up to date.
Merged PRs:
- PR 460 will-moore 'Channel min spinner fix'
- PR 465 will-moore 'Save as Figure'
- PR 469 will-moore 'changelog 0.14.0'
- PR 471 will-moore 'Z projection disabled tooltip'
- PR 475 will-moore 'Update build and publish in gha'
Repository: ome/omero-mapr
Excluded PRs:
- PR 79 will-moore 'Right panel title' (exclude comment)
Already up to date.
Merged PRs:
- PR 74 will-moore 'mapr extension of webclient'
Repository: ome/omero-metadata
Already up to date.
Conflicting PRs (not included):
- PR 55 kkoz 'Prevent users from creating columns with python keyword names'
- PR 64 will-moore 'Support images_by_name for Screen and Plate'
Repository: ome/omero-parade
Excluded PRs:
- PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
- PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
- PR 39 chris-allan 'Expand all for Screens' (exclude comment)
Already up to date.
Merged PRs:
- PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
- PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
- PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
Repository: ome/omero-prometheus-tools
Already up to date.
Merged PRs:
- PR 14 jburel 'use conda-forge channel'
Repository: ome/omero-rois
Excluded PRs:
- PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
Already up to date.
Merged PRs:
- PR 6 dominikl 'Add method to create masks grouped by label id'
Repository: ome/omero-signup
Already up to date.
Conflicting PRs (not included):
- PR 14 manics 'Add pre-commit (black, flake8)'
Repository: openmicroscopy/omero-test-infra
Already up to date.
Merged PRs:
- PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
Repository: ome/omero-upload
Already up to date.
Repository: ome/omero-virtual-microscope
Already up to date.
Repository: ome/omero-web-zarr
Excluded PRs:
- PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
Already up to date.
Conflicting PRs (not included):
- PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
Repository: openmicroscopy/omero-weberror
Already up to date.
Repository: openmicroscopy/omero-webtest
Already up to date.
Repository: ome/rOMERO-gateway
Already up to date.
Conflicting PRs (not included):
- PR 100 dominikl 'Run tests properly'
Repository: ome/scripts
Excluded PRs:
- PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
- PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
- PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
- PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.
Conflicting PRs (not included):
- PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Generated by OMERO-plugins-push#70 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/70/)'
2024-05-19 00:44:37,858 [ scc.git] DEBUG [detached HEAD f5115db] merge master -Dorg -Ssuccess-only
2024-05-19 00:44:37,858 [ scc.merge] INFO Repository: ome/omero-plugins
2024-05-19 00:44:37,858 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-)
2024-05-19 00:44:37,858 [ scc.merge] INFO Already up to date.
2024-05-19 00:44:37,859 [ scc.merge] INFO
2024-05-19 00:44:37,859 [ scc.merge] INFO
2024-05-19 00:44:37,859 [ scc.merge] INFO Repository: ome/minimal-omero-client
2024-05-19 00:44:37,859 [ scc.merge] INFO Already up to date.
2024-05-19 00:44:37,859 [ scc.merge] INFO
2024-05-19 00:44:37,859 [ scc.merge] INFO
2024-05-19 00:44:37,859 [ scc.merge] INFO Repository: ome/omero-cli-duplicate
2024-05-19 00:44:37,859 [ scc.merge] INFO Excluded PRs:
2024-05-19 00:44:37,859 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment)
2024-05-19 00:44:37,859 [ scc.merge] INFO Already up to date.
2024-05-19 00:44:37,859 [ scc.merge] INFO
2024-05-19 00:44:37,859 [ scc.merge] INFO Merged PRs:
2024-05-19 00:44:37,859 [ scc.merge] INFO - PR 25 jburel 'review message'
2024-05-19 00:44:37,859 [ scc.merge] INFO
2024-05-19 00:44:37,859 [ scc.merge] INFO Repository: ome/omero-cli-render
2024-05-19 00:44:37,859 [ scc.merge] INFO Excluded PRs:
2024-05-19 00:44:37,859 [ scc.merge] INFO - PR 62 dominikl 'Add export and impo(rt) commands' (stage: draft)
2024-05-19 00:44:37,859 [ scc.merge] INFO - PR 54 dominikl 'Change rendering settings spec' (stage: draft)
2024-05-19 00:44:37,859 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft)
2024-05-19 00:44:37,859 [ scc.merge] INFO - PR 48 dominikl 'Don't start rendering engine to get settings' (stage: draft)
2024-05-19 00:44:37,859 [ scc.merge] INFO Already up to date.
2024-05-19 00:44:37,859 [ scc.merge] INFO
2024-05-19 00:44:37,859 [ scc.merge] INFO Merged PRs:
2024-05-19 00:44:37,859 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate'
2024-05-19 00:44:37,859 [ scc.merge] INFO
2024-05-19 00:44:37,859 [ scc.merge] INFO Repository: ome/omero-cli-zarr
2024-05-19 00:44:37,859 [ scc.merge] INFO Excluded PRs:
2024-05-19 00:44:37,859 [ scc.merge] INFO - PR 161 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-05-19 00:44:37,859 [ scc.merge] INFO - PR 118 sbesson 'Allow to use bioformats2raw to export HCS data' (stage: draft)
2024-05-19 00:44:37,859 [ scc.merge] INFO Already up to date.
2024-05-19 00:44:37,859 [ scc.merge] INFO
2024-05-19 00:44:37,859 [ scc.merge] INFO Merged PRs:
2024-05-19 00:44:37,859 [ scc.merge] INFO - PR 147 will-moore 'Name option'
2024-05-19 00:44:37,860 [ scc.merge] INFO
2024-05-19 00:44:37,860 [ scc.merge] INFO Conflicting PRs (not included):
2024-05-19 00:44:37,860 [ scc.merge] INFO - PR 102 will-moore 'Zarr export tests'
2024-05-19 00:44:37,860 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID'
2024-05-19 00:44:37,860 [ scc.merge] INFO
2024-05-19 00:44:37,860 [ scc.merge] INFO Repository: ome/omero-figure
2024-05-19 00:44:37,860 [ scc.merge] INFO Excluded PRs:
2024-05-19 00:44:37,860 [ scc.merge] INFO - PR 560 will-moore 'Max projection bytes' (status: failure)
2024-05-19 00:44:37,860 [ scc.merge] INFO - PR 543 will-moore 'Plate well labels' (stage: draft)
2024-05-19 00:44:37,860 [ scc.merge] INFO Already up to date.
2024-05-19 00:44:37,860 [ scc.merge] INFO
2024-05-19 00:44:37,860 [ scc.merge] INFO Merged PRs:
2024-05-19 00:44:37,860 [ scc.merge] INFO - PR 549 will-moore 'Inset feature'
2024-05-19 00:44:37,860 [ scc.merge] INFO - PR 555 will-moore 'Points in shape editor'
2024-05-19 00:44:37,860 [ scc.merge] INFO - PR 562 will-moore 'Add changelog 7.0.0'
2024-05-19 00:44:37,860 [ scc.merge] INFO
2024-05-19 00:44:37,860 [ scc.merge] INFO Repository: ome/omero-fpbioimage
2024-05-19 00:44:37,860 [ scc.merge] INFO Already up to date.
2024-05-19 00:44:37,860 [ scc.merge] INFO
2024-05-19 00:44:37,860 [ scc.merge] INFO Merged PRs:
2024-05-19 00:44:37,860 [ scc.merge] INFO - PR 18 jburel 'default size z value'
2024-05-19 00:44:37,860 [ scc.merge] INFO
2024-05-19 00:44:37,860 [ scc.merge] INFO Repository: ome/omero-gallery
2024-05-19 00:44:37,860 [ scc.merge] INFO Already up to date.
2024-05-19 00:44:37,860 [ scc.merge] INFO
2024-05-19 00:44:37,860 [ scc.merge] INFO Merged PRs:
2024-05-19 00:44:37,860 [ scc.merge] INFO - PR 111 dependabot[bot] 'Bump semver from 5.7.0 to 5.7.2'
2024-05-19 00:44:37,860 [ scc.merge] INFO
2024-05-19 00:44:37,860 [ scc.merge] INFO Repository: ome/omero-iviewer
2024-05-19 00:44:37,860 [ scc.merge] INFO Excluded PRs:
2024-05-19 00:44:37,860 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment)
2024-05-19 00:44:37,860 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment)
2024-05-19 00:44:37,860 [ scc.merge] INFO Already up to date.
2024-05-19 00:44:37,860 [ scc.merge] INFO
2024-05-19 00:44:37,860 [ scc.merge] INFO Merged PRs:
2024-05-19 00:44:37,861 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix'
2024-05-19 00:44:37,861 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure'
2024-05-19 00:44:37,861 [ scc.merge] INFO - PR 469 will-moore 'changelog 0.14.0'
2024-05-19 00:44:37,861 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip'
2024-05-19 00:44:37,861 [ scc.merge] INFO - PR 475 will-moore 'Update build and publish in gha'
2024-05-19 00:44:37,861 [ scc.merge] INFO
2024-05-19 00:44:37,861 [ scc.merge] INFO Repository: ome/omero-mapr
2024-05-19 00:44:37,861 [ scc.merge] INFO Excluded PRs:
2024-05-19 00:44:37,861 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment)
2024-05-19 00:44:37,861 [ scc.merge] INFO Already up to date.
2024-05-19 00:44:37,861 [ scc.merge] INFO
2024-05-19 00:44:37,861 [ scc.merge] INFO Merged PRs:
2024-05-19 00:44:37,861 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient'
2024-05-19 00:44:37,861 [ scc.merge] INFO
2024-05-19 00:44:37,861 [ scc.merge] INFO Repository: ome/omero-metadata
2024-05-19 00:44:37,861 [ scc.merge] INFO Already up to date.
2024-05-19 00:44:37,861 [ scc.merge] INFO
2024-05-19 00:44:37,861 [ scc.merge] INFO Conflicting PRs (not included):
2024-05-19 00:44:37,861 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names'
2024-05-19 00:44:37,861 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate'
2024-05-19 00:44:37,861 [ scc.merge] INFO
2024-05-19 00:44:37,861 [ scc.merge] INFO Repository: ome/omero-parade
2024-05-19 00:44:37,861 [ scc.merge] INFO Excluded PRs:
2024-05-19 00:44:37,861 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment)
2024-05-19 00:44:37,861 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment)
2024-05-19 00:44:37,861 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment)
2024-05-19 00:44:37,861 [ scc.merge] INFO Already up to date.
2024-05-19 00:44:37,861 [ scc.merge] INFO
2024-05-19 00:44:37,861 [ scc.merge] INFO Merged PRs:
2024-05-19 00:44:37,861 [ scc.merge] INFO - PR 128 dependabot[bot] 'Bump postcss from 8.4.21 to 8.4.31'
2024-05-19 00:44:37,861 [ scc.merge] INFO - PR 129 dependabot[bot] 'Bump @babel/traverse from 7.21.4 to 7.23.2'
2024-05-19 00:44:37,861 [ scc.merge] INFO - PR 131 dependabot[bot] 'Bump axios from 1.3.5 to 1.6.0'
2024-05-19 00:44:37,861 [ scc.merge] INFO
2024-05-19 00:44:37,861 [ scc.merge] INFO Repository: ome/omero-prometheus-tools
2024-05-19 00:44:37,861 [ scc.merge] INFO Already up to date.
2024-05-19 00:44:37,861 [ scc.merge] INFO
2024-05-19 00:44:37,861 [ scc.merge] INFO Merged PRs:
2024-05-19 00:44:37,861 [ scc.merge] INFO - PR 14 jburel 'use conda-forge channel'
2024-05-19 00:44:37,861 [ scc.merge] INFO
2024-05-19 00:44:37,862 [ scc.merge] INFO Repository: ome/omero-rois
2024-05-19 00:44:37,862 [ scc.merge] INFO Excluded PRs:
2024-05-19 00:44:37,862 [ scc.merge] INFO - PR 28 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot])
2024-05-19 00:44:37,862 [ scc.merge] INFO Already up to date.
2024-05-19 00:44:37,862 [ scc.merge] INFO
2024-05-19 00:44:37,862 [ scc.merge] INFO Merged PRs:
2024-05-19 00:44:37,862 [ scc.merge] INFO - PR 6 dominikl 'Add method to create masks grouped by label id'
2024-05-19 00:44:37,862 [ scc.merge] INFO
2024-05-19 00:44:37,862 [ scc.merge] INFO Repository: ome/omero-signup
2024-05-19 00:44:37,862 [ scc.merge] INFO Already up to date.
2024-05-19 00:44:37,862 [ scc.merge] INFO
2024-05-19 00:44:37,862 [ scc.merge] INFO Conflicting PRs (not included):
2024-05-19 00:44:37,862 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)'
2024-05-19 00:44:37,862 [ scc.merge] INFO
2024-05-19 00:44:37,862 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra
2024-05-19 00:44:37,862 [ scc.merge] INFO Already up to date.
2024-05-19 00:44:37,862 [ scc.merge] INFO
2024-05-19 00:44:37,862 [ scc.merge] INFO Merged PRs:
2024-05-19 00:44:37,862 [ scc.merge] INFO - PR 12 joshmoore 'IDR: use downloaded ansible templates & variables to configure infra'
2024-05-19 00:44:37,862 [ scc.merge] INFO
2024-05-19 00:44:37,862 [ scc.merge] INFO Repository: ome/omero-upload
2024-05-19 00:44:37,862 [ scc.merge] INFO Already up to date.
2024-05-19 00:44:37,862 [ scc.merge] INFO
2024-05-19 00:44:37,862 [ scc.merge] INFO
2024-05-19 00:44:37,862 [ scc.merge] INFO Repository: ome/omero-virtual-microscope
2024-05-19 00:44:37,862 [ scc.merge] INFO Already up to date.
2024-05-19 00:44:37,862 [ scc.merge] INFO
2024-05-19 00:44:37,862 [ scc.merge] INFO
2024-05-19 00:44:37,862 [ scc.merge] INFO Repository: ome/omero-web-zarr
2024-05-19 00:44:37,862 [ scc.merge] INFO Excluded PRs:
2024-05-19 00:44:37,862 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft)
2024-05-19 00:44:37,862 [ scc.merge] INFO Already up to date.
2024-05-19 00:44:37,862 [ scc.merge] INFO
2024-05-19 00:44:37,862 [ scc.merge] INFO Conflicting PRs (not included):
2024-05-19 00:44:37,862 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer'
2024-05-19 00:44:37,862 [ scc.merge] INFO
2024-05-19 00:44:37,862 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror
2024-05-19 00:44:37,862 [ scc.merge] INFO Already up to date.
2024-05-19 00:44:37,863 [ scc.merge] INFO
2024-05-19 00:44:37,863 [ scc.merge] INFO
2024-05-19 00:44:37,863 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest
2024-05-19 00:44:37,863 [ scc.merge] INFO Already up to date.
2024-05-19 00:44:37,863 [ scc.merge] INFO
2024-05-19 00:44:37,863 [ scc.merge] INFO
2024-05-19 00:44:37,863 [ scc.merge] INFO Repository: ome/rOMERO-gateway
2024-05-19 00:44:37,863 [ scc.merge] INFO Already up to date.
2024-05-19 00:44:37,863 [ scc.merge] INFO
2024-05-19 00:44:37,863 [ scc.merge] INFO Conflicting PRs (not included):
2024-05-19 00:44:37,863 [ scc.merge] INFO - PR 100 dominikl 'Run tests properly'
2024-05-19 00:44:37,863 [ scc.merge] INFO
2024-05-19 00:44:37,863 [ scc.merge] INFO Repository: ome/scripts
2024-05-19 00:44:37,863 [ scc.merge] INFO Excluded PRs:
2024-05-19 00:44:37,863 [ scc.merge] INFO - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-05-19 00:44:37,863 [ scc.merge] INFO - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-05-19 00:44:37,863 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-05-19 00:44:37,863 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-05-19 00:44:37,863 [ scc.merge] INFO Already up to date.
2024-05-19 00:44:37,863 [ scc.merge] INFO
2024-05-19 00:44:37,863 [ scc.merge] INFO Conflicting PRs (not included):
2024-05-19 00:44:37,863 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-05-19 00:44:37,863 [ scc.merge] INFO
2024-05-19 00:44:37,863 [ scc.merge] DEBUG Cleaning remote branches created for merging
2024-05-19 00:44:37,863 [ scc.git] DEBUG Calling 'git remote'
2024-05-19 00:44:37,869 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client
2024-05-19 00:44:37,870 [ scc.git] DEBUG Calling 'git remote'
2024-05-19 00:44:37,875 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:44:37,875 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate
2024-05-19 00:44:37,875 [ scc.git] DEBUG Calling 'git remote'
2024-05-19 00:44:37,880 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:44:37,880 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render
2024-05-19 00:44:37,880 [ scc.git] DEBUG Calling 'git remote'
2024-05-19 00:44:37,884 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:44:37,885 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr
2024-05-19 00:44:37,885 [ scc.git] DEBUG Calling 'git remote'
2024-05-19 00:44:37,889 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:44:37,889 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure
2024-05-19 00:44:37,889 [ scc.git] DEBUG Calling 'git remote'
2024-05-19 00:44:37,894 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:44:37,894 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage
2024-05-19 00:44:37,894 [ scc.git] DEBUG Calling 'git remote'
2024-05-19 00:44:37,898 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:44:37,899 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery
2024-05-19 00:44:37,899 [ scc.git] DEBUG Calling 'git remote'
2024-05-19 00:44:37,903 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:44:37,903 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer
2024-05-19 00:44:37,903 [ scc.git] DEBUG Calling 'git remote'
2024-05-19 00:44:37,908 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:44:37,908 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr
2024-05-19 00:44:37,908 [ scc.git] DEBUG Calling 'git remote'
2024-05-19 00:44:37,913 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:44:37,913 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata
2024-05-19 00:44:37,913 [ scc.git] DEBUG Calling 'git remote'
2024-05-19 00:44:37,919 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:44:37,919 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade
2024-05-19 00:44:37,919 [ scc.git] DEBUG Calling 'git remote'
2024-05-19 00:44:37,924 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:44:37,924 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools
2024-05-19 00:44:37,924 [ scc.git] DEBUG Calling 'git remote'
2024-05-19 00:44:37,929 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:44:37,929 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois
2024-05-19 00:44:37,930 [ scc.git] DEBUG Calling 'git remote'
2024-05-19 00:44:37,936 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:44:37,936 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup
2024-05-19 00:44:37,936 [ scc.git] DEBUG Calling 'git remote'
2024-05-19 00:44:37,942 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:44:37,942 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra
2024-05-19 00:44:37,942 [ scc.git] DEBUG Calling 'git remote'
2024-05-19 00:44:37,948 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:44:37,948 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload
2024-05-19 00:44:37,948 [ scc.git] DEBUG Calling 'git remote'
2024-05-19 00:44:37,953 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:44:37,953 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope
2024-05-19 00:44:37,953 [ scc.git] DEBUG Calling 'git remote'
2024-05-19 00:44:37,958 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:44:37,958 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr
2024-05-19 00:44:37,958 [ scc.git] DEBUG Calling 'git remote'
2024-05-19 00:44:37,962 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:44:37,963 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror
2024-05-19 00:44:37,963 [ scc.git] DEBUG Calling 'git remote'
2024-05-19 00:44:37,967 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:44:37,967 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest
2024-05-19 00:44:37,967 [ scc.git] DEBUG Calling 'git remote'
2024-05-19 00:44:37,972 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:44:37,972 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway
2024-05-19 00:44:37,972 [ scc.git] DEBUG Calling 'git remote'
2024-05-19 00:44:37,976 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
2024-05-19 00:44:37,976 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts
2024-05-19 00:44:37,976 [ scc.git] DEBUG Calling 'git remote'
2024-05-19 00:44:37,983 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push
Update component versions
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
WARNING: The wheel package is not available.
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
/home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.9/site-packages/setuptools/dist.py:466: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0'
warnings.warn(tmpl.format(**locals()))
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
WARNING: '' not a valid package name; please use only .-separated package names in setup.py
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
python3: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory
Updating omero-gateway from 5.9.1 to 5.9.2-SNAPSHOT
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Commit all component version changes
Entering 'minimal-omero-client'
Entering 'omero-cli-duplicate'
Entering 'omero-cli-render'
Entering 'omero-cli-zarr'
Entering 'omero-figure'
Entering 'omero-fpbioimage'
Entering 'omero-gallery'
Entering 'omero-iviewer'
Entering 'omero-mapr'
Entering 'omero-metadata'
Entering 'omero-parade'
Entering 'omero-prometheus-tools'
Entering 'omero-rois'
Entering 'omero-signup'
Entering 'omero-test-infra'
Entering 'omero-upload'
Entering 'omero-virtual-microscope'
Entering 'omero-web-zarr'
Entering 'omero-weberror'
Entering 'omero-webtest'
Entering 'rOMERO-gateway'
Entering 'scripts'
Entering 'minimal-omero-client'
[detached HEAD 40e86c1] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Entering 'omero-cli-duplicate'
HEAD detached from 027b3e6
nothing to commit, working tree clean
Entering 'omero-cli-render'
HEAD detached from 53e3f42
nothing to commit, working tree clean
Entering 'omero-cli-zarr'
HEAD detached from 2ca566b
Untracked files:
(use "git add <file>..." to include in what will be committed)
.eggs/
nothing added to commit but untracked files present (use "git add" to track)
Entering 'omero-figure'
HEAD detached from 3d9e3b87
nothing to commit, working tree clean
Entering 'omero-fpbioimage'
HEAD detached from e5b3ca3
nothing to commit, working tree clean
Entering 'omero-gallery'
HEAD detached from 56f4435
nothing to commit, working tree clean
Entering 'omero-iviewer'
HEAD detached from 54c3753
nothing to commit, working tree clean
Entering 'omero-mapr'
HEAD detached from 9631b15
nothing to commit, working tree clean
Entering 'omero-metadata'
HEAD detached from e2fc5ec
nothing to commit, working tree clean
Entering 'omero-parade'
HEAD detached from 5d441c2
nothing to commit, working tree clean
Entering 'omero-prometheus-tools'
HEAD detached from 18bccb6
nothing to commit, working tree clean
Entering 'omero-rois'
HEAD detached from 5c752d5
nothing to commit, working tree clean
Entering 'omero-signup'
HEAD detached from c8610db
nothing to commit, working tree clean
Entering 'omero-test-infra'
HEAD detached from a0148a6
nothing to commit, working tree clean
Entering 'omero-upload'
HEAD detached from aca9e9c
nothing to commit, working tree clean
Entering 'omero-virtual-microscope'
HEAD detached from deab817
nothing to commit, working tree clean
Entering 'omero-web-zarr'
HEAD detached from 67bb245
nothing to commit, working tree clean
Entering 'omero-weberror'
HEAD detached from adfa132
nothing to commit, working tree clean
Entering 'omero-webtest'
HEAD detached from 8da48e1
nothing to commit, working tree clean
Entering 'rOMERO-gateway'
HEAD detached from 7b5d64d
nothing to commit, working tree clean
Entering 'scripts'
HEAD detached from 5a90893
nothing to commit, working tree clean
[detached HEAD a9cd08d] Update component versions
1 file changed, 1 insertion(+), 1 deletion(-)
Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
2024-05-19 00:45:24,623 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919
Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
2024-05-19 00:45:33,578 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425
Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
2024-05-19 00:45:35,977 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383
Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2024-05-19 00:45:40,557 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545
2024-05-19 00:46:27,047 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci
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