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Started by upstream project "Trigger" build number 148
originally caused by:
 Started by timer
[Pipeline] Start of Pipeline
[Pipeline] node
Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push
[Pipeline] {
[Pipeline] library
Loading library recursiveMerge@master
Attempting to resolve master from remote references...
 > git --version # timeout=10
 > git --version # 'git version 2.39.2'
 > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Found match: refs/heads/master revision f061dff15033c5cd55249a383f52c15ca4a0e5cf
The recommended git tool is: NONE
No credentials specified
 > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10
Fetching changes from the remote Git repository
 > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10
Fetching without tags
Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git
 > git --version # timeout=10
 > git --version # 'git version 2.39.2'
 > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision f061dff15033c5cd55249a383f52c15ca4a0e5cf (master)
 > git config core.sparsecheckout # timeout=10
 > git checkout -f f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10
Commit message: "Merge pull request #17 from jburel/python3"
 > git rev-list --no-walk f061dff15033c5cd55249a383f52c15ca4a0e5cf # timeout=10
[Pipeline] checkout
The recommended git tool is: NONE
No credentials specified
Fetching changes from the remote Git repository
 > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10
 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10
Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git
 > git --version # timeout=10
 > git --version # 'git version 2.39.3'
 > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10
Checking out Revision 508496fba006c24030e94a686761108e34ba8f70 (refs/remotes/origin/master)
Commit message: "Merge pull request #288 from ome/dependabot/submodules/omero-web-ba8c7e2"
 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10
 > git config core.sparsecheckout # timeout=10
 > git checkout -f 508496fba006c24030e94a686761108e34ba8f70 # timeout=10
 > git rev-list --no-walk 508496fba006c24030e94a686761108e34ba8f70 # timeout=10
Cleaning workspace
 > git rev-parse --verify HEAD # timeout=10
Resetting working tree
 > git reset --hard # timeout=10
 > git clean -fdx # timeout=10
 > git submodule foreach --recursive git reset --hard # timeout=10
 > git submodule foreach --recursive git clean -fdx # timeout=10
 > git remote # timeout=10
 > git submodule init # timeout=10
 > git submodule sync # timeout=10
 > git config --get remote.origin.url # timeout=10
 > git submodule init # timeout=10
 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10
 > git config --get submodule.omero-py.url # timeout=10
 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10
 > git config --get submodule.omero-web.url # timeout=10
 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10
 > git config --get submodule.omero-marshal.url # timeout=10
 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10
 > git config --get submodule.omero-dropbox.url # timeout=10
 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10
 > git config --get submodule.omero-scripts.url # timeout=10
 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10
 > git submodule update --init --recursive omero-py # timeout=10
 > git submodule update --init --recursive omero-web # timeout=10
[Pipeline] pwd
[Pipeline] copyArtifacts
Copied 1 artifact from "OMERO-build-push" build number 129
[Pipeline] sh
+ pushd build
~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push
+ curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz
+ tar -zxf -
 > git submodule update --init --recursive omero-marshal # timeout=10
 > git submodule update --init --recursive omero-dropbox # timeout=10
 > git submodule update --init --recursive omero-scripts # timeout=10
+ popd
~/workspace/OMERO-python-superbuild-push
+ python3 -m venv build/venv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ python3 -m pip install -U pip
Requirement already satisfied: pip in ./build/venv/lib/python3.9/site-packages (21.2.3)
Collecting pip
  Using cached pip-24.1.2-py3-none-any.whl (1.8 MB)
Installing collected packages: pip
  Attempting uninstall: pip
    Found existing installation: pip 21.2.3
    Uninstalling pip-21.2.3:
      Successfully uninstalled pip-21.2.3
Successfully installed pip-24.1.2
+ python3 -m pip install scc
Collecting scc
  Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB)
Collecting PyGithub>=1.54 (from scc)
  Using cached PyGithub-2.3.0-py3-none-any.whl.metadata (3.8 kB)
Collecting PyYAML>=5.1 (from scc)
  Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB)
Collecting future (from scc)
  Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB)
Collecting ruamel.yaml (from scc)
  Using cached ruamel.yaml-0.18.6-py3-none-any.whl.metadata (23 kB)
Collecting ruamel.yaml.jinja2 (from scc)
  Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB)
Collecting six (from scc)
  Using cached six-1.16.0-py2.py3-none-any.whl.metadata (1.8 kB)
Collecting urllib3<2 (from scc)
  Using cached urllib3-1.26.19-py2.py3-none-any.whl.metadata (49 kB)
Collecting yaclifw<0.3,>=0.2.0 (from scc)
  Using cached yaclifw-0.2.0-py3-none-any.whl
Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc)
  Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB)
Collecting requests>=2.14.0 (from PyGithub>=1.54->scc)
  Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB)
Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
  Using cached PyJWT-2.8.0-py3-none-any.whl.metadata (4.2 kB)
Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc)
  Using cached typing_extensions-4.12.2-py3-none-any.whl.metadata (3.0 kB)
Collecting Deprecated (from PyGithub>=1.54->scc)
  Using cached Deprecated-1.2.14-py2.py3-none-any.whl.metadata (5.4 kB)
Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc)
  Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl.metadata (2.2 kB)
Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc)
  Using cached cryptography-43.0.0-cp39-abi3-manylinux_2_28_x86_64.whl.metadata (5.4 kB)
Collecting cffi>=1.4.1 (from pynacl>=1.4.0->PyGithub>=1.54->scc)
  Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB)
Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc)
  Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (33 kB)
Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc)
  Using cached idna-3.7-py3-none-any.whl.metadata (9.9 kB)
Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc)
  Using cached certifi-2024.7.4-py3-none-any.whl.metadata (2.2 kB)
Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc)
  Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.6 kB)
Collecting pycparser (from cffi>=1.4.1->pynacl>=1.4.0->PyGithub>=1.54->scc)
  Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes)
Using cached scc-0.20.0-py3-none-any.whl (48 kB)
Using cached PyGithub-2.3.0-py3-none-any.whl (354 kB)
Using cached PyYAML-6.0.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (738 kB)
Using cached urllib3-1.26.19-py2.py3-none-any.whl (143 kB)
Using cached future-1.0.0-py3-none-any.whl (491 kB)
Using cached ruamel.yaml-0.18.6-py3-none-any.whl (117 kB)
Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB)
Using cached six-1.16.0-py2.py3-none-any.whl (11 kB)
Using cached PyJWT-2.8.0-py3-none-any.whl (22 kB)
Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB)
Using cached requests-2.32.3-py3-none-any.whl (64 kB)
Using cached ruamel.yaml.clib-0.2.8-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.whl (562 kB)
Using cached typing_extensions-4.12.2-py3-none-any.whl (37 kB)
Using cached Deprecated-1.2.14-py2.py3-none-any.whl (9.6 kB)
Using cached certifi-2024.7.4-py3-none-any.whl (162 kB)
Using cached cffi-1.16.0-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (443 kB)
Using cached charset_normalizer-3.3.2-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (142 kB)
Using cached cryptography-43.0.0-cp39-abi3-manylinux_2_28_x86_64.whl (4.0 MB)
Using cached idna-3.7-py3-none-any.whl (66 kB)
Using cached wrapt-1.16.0-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (80 kB)
Using cached pycparser-2.22-py3-none-any.whl (117 kB)
Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc
Successfully installed Deprecated-1.2.14 PyGithub-2.3.0 PyYAML-6.0.1 certifi-2024.7.4 cffi-1.16.0 charset-normalizer-3.3.2 cryptography-43.0.0 future-1.0.0 idna-3.7 pycparser-2.22 pyjwt-2.8.0 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.6 ruamel.yaml.clib-0.2.8 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.16.0 typing-extensions-4.12.2 urllib3-1.26.19 wrapt-1.16.0 yaclifw-0.2.0
[Pipeline] sh
+ export BASE_REPO=omero-python-superbuild.git
+ BASE_REPO=omero-python-superbuild.git
+ export BASE_BRANCH=master
+ BASE_BRANCH=master
+ export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv
+ . build/venv/bin/activate
++ deactivate nondestructive
++ '[' -n '' ']'
++ '[' -n '' ']'
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
++ '[' -n '' ']'
++ unset VIRTUAL_ENV
++ '[' '!' nondestructive = nondestructive ']'
++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv
++ export VIRTUAL_ENV
++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
++ export PATH
++ '[' -n '' ']'
++ '[' -z '' ']'
++ _OLD_VIRTUAL_PS1=
++ PS1='(venv) '
++ export PS1
++ '[' -n /bin/bash -o -n '' ']'
++ hash -r
+ '[' merge_ci '!=' null ']'
+ export PUSH_BRANCH=merge_ci
+ PUSH_BRANCH=merge_ci
+ '[' null '!=' null ']'
+ export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment'
+ STATUS=success-only
+ MERGE_OPTIONS='-vvv --no-ask --reset --comment'
+ bash build/build-infra-master/recursive-merge
Merge base repository (no submodule updates)
2024-07-24 00:33:11,362 [  scc.config] DEBUG Found github.token
2024-07-24 00:33:11,365 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-07-24 00:33:11,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-24 00:33:12,007 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-24 00:33:12,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-07-24 00:33:12,424 [      scc.gh] DEBUG 4772 remaining from 5000 (Reset at 01:07
2024-07-24 00:33:12,426 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-24 00:33:12,431 [     scc.git] DEBUG Check current status
2024-07-24 00:33:12,431 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-24 00:33:12,436 [     scc.git] DEBUG 508496f Merge pull request #288 from ome/dependabot/submodules/omero-web-ba8c7e2
2024-07-24 00:33:12,436 [     scc.git] DEBUG Calling 'git submodule status'
2024-07-24 00:33:12,481 [     scc.git] DEBUG  a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-07-24 00:33:12,483 [     scc.git] DEBUG  cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-07-24 00:33:12,487 [     scc.git] DEBUG  749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-07-24 00:33:12,490 [     scc.git] DEBUG  c20d2734b711c659cecea83db6e2ebd7b7013636 omero-scripts (v5.8.2-3-gc20d273)
2024-07-24 00:33:12,888 [     scc.git] DEBUG  ba8c7e23c5d3343992812b7579e8d2cf30eb5374 omero-web (v5.26.0-28-gba8c7e23c)
2024-07-24 00:33:12,893 [  scc.config] DEBUG Found remote.origin.url
2024-07-24 00:33:13,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-07-24 00:33:13,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-24 00:33:14,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-24 00:33:14,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-24 00:33:14,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-24 00:33:14,869 [     scc.git] DEBUG Resetting...
2024-07-24 00:33:14,869 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-07-24 00:33:14,876 [     scc.git] DEBUG HEAD is now at 508496f Merge pull request #288 from ome/dependabot/submodules/omero-web-ba8c7e2
2024-07-24 00:33:14,877 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2024-07-24 00:33:14,937 [     scc.git] DEBUG Check current status
2024-07-24 00:33:14,937 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-24 00:33:14,942 [     scc.git] DEBUG 508496f Merge pull request #288 from ome/dependabot/submodules/omero-web-ba8c7e2
2024-07-24 00:33:14,942 [     scc.git] DEBUG Calling 'git submodule status'
2024-07-24 00:33:14,993 [     scc.git] DEBUG  a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-07-24 00:33:14,997 [     scc.git] DEBUG  cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-07-24 00:33:15,001 [     scc.git] DEBUG  749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-07-24 00:33:15,006 [     scc.git] DEBUG  c20d2734b711c659cecea83db6e2ebd7b7013636 omero-scripts (v5.8.2-3-gc20d273)
2024-07-24 00:33:15,011 [     scc.git] DEBUG  ba8c7e23c5d3343992812b7579e8d2cf30eb5374 omero-web (v5.26.0-28-gba8c7e23c)
2024-07-24 00:33:15,012 [   scc.merge] INFO  Merging Pull Request(s) based on master
2024-07-24 00:33:15,012 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2024-07-24 00:33:15,012 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2024-07-24 00:33:15,012 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2024-07-24 00:33:15,012 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2024-07-24 00:33:15,012 [    scc.repo] DEBUG ## PRs found:
2024-07-24 00:33:15,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2
2024-07-24 00:33:15,340 [    scc.repo] DEBUG ## Branches found:
2024-07-24 00:33:15,341 [     scc.git] DEBUG Get sha1 of %s
2024-07-24 00:33:15,341 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-24 00:33:15,346 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-24 00:33:15,349 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-24 00:33:15,350 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-24 00:33:15,355 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-24 00:33:15,360 [     scc.git] DEBUG Already up to date.

2024-07-24 00:33:15,360 [     scc.git] DEBUG ## Unique users: []
2024-07-24 00:33:15,360 [     scc.git] DEBUG Get sha1 of %s
2024-07-24 00:33:15,360 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-24 00:33:15,364 [     scc.git] DEBUG Calling 'git submodule update'
2024-07-24 00:33:15,405 [     scc.git] DEBUG Get sha1 of %s
2024-07-24 00:33:15,405 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-24 00:33:15,410 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-07-24 00:33:15,823 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7f8d100fb310> has no local changes
2024-07-24 00:33:15,823 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone

Repository: ome/omero-python-superbuild
Already up to date.


Generated by OMERO-python-superbuild-push#125 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/125/)'
2024-07-24 00:33:15,854 [     scc.git] DEBUG [detached HEAD 6b9cafa] merge master -Dorg -Snone
2024-07-24 00:33:15,854 [   scc.merge] INFO  Repository: ome/omero-python-superbuild
2024-07-24 00:33:15,854 [   scc.merge] INFO  Already up to date.
2024-07-24 00:33:15,854 [   scc.merge] INFO  
2024-07-24 00:33:15,854 [   scc.merge] INFO  
2024-07-24 00:33:15,855 [   scc.merge] DEBUG Cleaning remote branches created for merging
2024-07-24 00:33:15,855 [     scc.git] DEBUG Calling 'git remote'
Synchronizing submodule url for 'omero-dropbox'
Synchronizing submodule url for 'omero-marshal'
Synchronizing submodule url for 'omero-py'
Synchronizing submodule url for 'omero-scripts'
Synchronizing submodule url for 'omero-web'
Merge all submodules using repository configuration:
base-branch: master

submodules:
  omero-scripts:
    base-branch: develop
2024-07-24 00:33:18,415 [  scc.config] DEBUG Found github.token
2024-07-24 00:33:18,417 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443
2024-07-24 00:33:18,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-24 00:33:19,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-24 00:33:19,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None
2024-07-24 00:33:19,446 [      scc.gh] DEBUG 4764 remaining from 5000 (Reset at 01:07
2024-07-24 00:33:19,447 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-24 00:33:19,451 [     scc.git] DEBUG Check current status
2024-07-24 00:33:19,451 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-24 00:33:19,455 [     scc.git] DEBUG 6b9cafa merge master -Dorg -Snone
2024-07-24 00:33:19,455 [     scc.git] DEBUG Calling 'git submodule status'
2024-07-24 00:33:19,504 [     scc.git] DEBUG  a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-07-24 00:33:19,507 [     scc.git] DEBUG  cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-07-24 00:33:19,511 [     scc.git] DEBUG  749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-07-24 00:33:19,515 [     scc.git] DEBUG  c20d2734b711c659cecea83db6e2ebd7b7013636 omero-scripts (v5.8.2-3-gc20d273)
2024-07-24 00:33:19,522 [     scc.git] DEBUG  ba8c7e23c5d3343992812b7579e8d2cf30eb5374 omero-web (v5.26.0-28-gba8c7e23c)
2024-07-24 00:33:19,528 [  scc.config] DEBUG Found remote.origin.url
2024-07-24 00:33:19,528 [     scc.git] DEBUG Reading repository configuration from repositories.yml
2024-07-24 00:33:19,530 [     scc.git] DEBUG Repository configuration:
base-branch: master
submodules:
  omero-scripts:
    base-branch: develop

2024-07-24 00:33:19,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None
2024-07-24 00:33:20,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-24 00:33:20,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-24 00:33:21,246 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-24 00:33:21,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-24 00:33:21,663 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-24 00:33:21,716 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-07-24 00:33:21,717 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-24 00:33:21,721 [     scc.git] DEBUG Check current status
2024-07-24 00:33:21,721 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-24 00:33:21,727 [     scc.git] DEBUG a4307f4 Bump version: 5.7.0 → 5.7.1.dev0
2024-07-24 00:33:21,728 [     scc.git] DEBUG Calling 'git submodule status'
2024-07-24 00:33:21,779 [  scc.config] DEBUG Found remote.origin.url
2024-07-24 00:33:22,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None
2024-07-24 00:33:22,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-24 00:33:22,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-24 00:33:23,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-24 00:33:23,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-24 00:33:23,862 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-24 00:33:23,910 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-24 00:33:23,911 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-07-24 00:33:23,911 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-24 00:33:23,915 [     scc.git] DEBUG Check current status
2024-07-24 00:33:23,916 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-24 00:33:23,920 [     scc.git] DEBUG cca4c2f Merge pull request #80 from sbesson/python312
2024-07-24 00:33:23,921 [     scc.git] DEBUG Calling 'git submodule status'
2024-07-24 00:33:23,970 [  scc.config] DEBUG Found remote.origin.url
2024-07-24 00:33:24,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None
2024-07-24 00:33:24,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-24 00:33:25,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-24 00:33:25,720 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-24 00:33:26,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-24 00:33:26,162 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-24 00:33:26,210 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-24 00:33:26,211 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-07-24 00:33:26,211 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-24 00:33:26,215 [     scc.git] DEBUG Check current status
2024-07-24 00:33:26,215 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-24 00:33:26,233 [     scc.git] DEBUG 749a68ac Bump version: 5.19.4 → 5.19.5.dev0
2024-07-24 00:33:26,233 [     scc.git] DEBUG Calling 'git submodule status'
2024-07-24 00:33:26,280 [  scc.config] DEBUG Found remote.origin.url
2024-07-24 00:33:26,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None
2024-07-24 00:33:27,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-24 00:33:27,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-24 00:33:28,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-24 00:33:28,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-24 00:33:28,434 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-24 00:33:28,481 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-24 00:33:28,482 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-07-24 00:33:28,482 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-24 00:33:28,486 [     scc.git] DEBUG Check current status
2024-07-24 00:33:28,486 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-24 00:33:28,500 [     scc.git] DEBUG c20d273 Merge pull request #221 from imcf/fix-typechecking
2024-07-24 00:33:28,500 [     scc.git] DEBUG Calling 'git submodule status'
2024-07-24 00:33:28,553 [  scc.config] DEBUG Found remote.origin.url
2024-07-24 00:33:28,554 [     scc.git] DEBUG Repository configuration:
base-branch: develop

2024-07-24 00:33:28,949 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None
2024-07-24 00:33:29,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-24 00:33:29,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-24 00:33:30,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-24 00:33:30,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-24 00:33:30,682 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-24 00:33:30,726 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-24 00:33:30,727 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-07-24 00:33:30,727 [     scc.git] DEBUG Calling 'git rev-parse --show-toplevel'
2024-07-24 00:33:30,731 [     scc.git] DEBUG Check current status
2024-07-24 00:33:30,731 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-24 00:33:30,748 [     scc.git] DEBUG ba8c7e23c Merge pull request #563 from chris-allan/batch-by-max-download-rows
2024-07-24 00:33:30,749 [     scc.git] DEBUG Calling 'git submodule status'
2024-07-24 00:33:30,795 [  scc.config] DEBUG Found remote.origin.url
2024-07-24 00:33:31,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None
2024-07-24 00:33:31,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None
2024-07-24 00:33:32,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None
2024-07-24 00:33:32,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None
2024-07-24 00:33:32,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None
2024-07-24 00:33:32,928 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-24 00:33:32,969 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-24 00:33:32,969 [     scc.git] DEBUG Resetting...
2024-07-24 00:33:32,969 [     scc.git] DEBUG Calling 'git reset --hard HEAD'
2024-07-24 00:33:32,976 [     scc.git] DEBUG HEAD is now at 6b9cafa merge master -Dorg -Snone
2024-07-24 00:33:32,977 [     scc.git] DEBUG Calling 'git submodule update --recursive'
2024-07-24 00:33:33,031 [     scc.git] DEBUG Check current status
2024-07-24 00:33:33,031 [     scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD'
2024-07-24 00:33:33,036 [     scc.git] DEBUG 6b9cafa merge master -Dorg -Snone
2024-07-24 00:33:33,036 [     scc.git] DEBUG Calling 'git submodule status'
2024-07-24 00:33:33,080 [     scc.git] DEBUG  a4307f475a2690c4aa4f287864bad9d6d97ebb8f omero-dropbox (v5.7.0-1-ga4307f4)
2024-07-24 00:33:33,085 [     scc.git] DEBUG  cca4c2f7b6934b48b8ddb0e337c32d32cd4a07f3 omero-marshal (v0.9.0-4-gcca4c2f)
2024-07-24 00:33:33,094 [     scc.git] DEBUG  749a68acfc7b1851c165ae75f2c118743d8b1e0d omero-py (v5.19.4-1-g749a68ac)
2024-07-24 00:33:33,105 [     scc.git] DEBUG  c20d2734b711c659cecea83db6e2ebd7b7013636 omero-scripts (v5.8.2-3-gc20d273)
2024-07-24 00:33:33,112 [     scc.git] DEBUG  ba8c7e23c5d3343992812b7579e8d2cf30eb5374 omero-web (v5.26.0-28-gba8c7e23c)
2024-07-24 00:33:33,113 [   scc.merge] INFO  Merging Pull Request(s) based on master
2024-07-24 00:33:33,113 [   scc.merge] INFO  Including Pull Request(s) opened by any public member of the organization
2024-07-24 00:33:33,113 [   scc.merge] INFO  Including Pull Request(s) labelled as include or dependencies
2024-07-24 00:33:33,113 [   scc.merge] INFO  Excluding Pull Request(s) staged as draft
2024-07-24 00:33:33,113 [   scc.merge] INFO  Excluding Pull Request(s) labelled as exclude or breaking
2024-07-24 00:33:33,113 [   scc.merge] INFO  Excluding Pull Request(s) without successful status
2024-07-24 00:33:33,114 [    scc.repo] DEBUG ## PRs found:
2024-07-24 00:33:33,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2
2024-07-24 00:33:33,365 [    scc.repo] DEBUG ## Branches found:
2024-07-24 00:33:33,365 [     scc.git] DEBUG Get sha1 of %s
2024-07-24 00:33:33,365 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-24 00:33:33,369 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-24 00:33:33,374 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-24 00:33:33,374 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-24 00:33:33,378 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-24 00:33:33,382 [     scc.git] DEBUG Already up to date.

2024-07-24 00:33:33,383 [     scc.git] DEBUG ## Unique users: []
2024-07-24 00:33:33,383 [     scc.git] DEBUG Get sha1 of %s
2024-07-24 00:33:33,383 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-24 00:33:33,387 [     scc.git] DEBUG Calling 'git submodule update'
2024-07-24 00:33:33,431 [     scc.git] DEBUG Get sha1 of %s
2024-07-24 00:33:33,431 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-24 00:33:33,435 [    scc.repo] DEBUG ## PRs found:
2024-07-24 00:33:33,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None
2024-07-24 00:33:34,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None
2024-07-24 00:33:34,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None
2024-07-24 00:33:35,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-07-24 00:33:35,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-24 00:33:36,338 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None
2024-07-24 00:33:36,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2
2024-07-24 00:33:36,757 [    scc.repo] DEBUG   - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-07-24 00:33:36,757 [    scc.repo] DEBUG ## Branches found:
2024-07-24 00:33:36,757 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-07-24 00:33:36,758 [     scc.git] DEBUG Get sha1 of %s
2024-07-24 00:33:36,758 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-24 00:33:36,762 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-24 00:33:36,766 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-24 00:33:36,766 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-24 00:33:36,771 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-24 00:33:36,776 [     scc.git] DEBUG Already up to date.

2024-07-24 00:33:36,776 [     scc.git] DEBUG Calling 'git fetch origin pull/16/head'
2024-07-24 00:33:37,224 [     scc.git] DEBUG From https://github.com/ome/omero-dropbox
2024-07-24 00:33:37,225 [     scc.git] DEBUG  * branch            refs/pull/16/head -> FETCH_HEAD
2024-07-24 00:33:37,230 [     scc.git] DEBUG ## Unique users: []
2024-07-24 00:33:37,230 [     scc.git] DEBUG Get sha1 of %s
2024-07-24 00:33:37,230 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-24 00:33:37,235 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-07-24 00:33:37,241 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-24 00:33:37,245 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452'
2024-07-24 00:33:37,454 [     scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py
2024-07-24 00:33:37,454 [     scc.git] DEBUG Auto-merging src/fsDirectory.py
2024-07-24 00:33:37,454 [     scc.git] DEBUG Auto-merging src/fsDropBox.py
2024-07-24 00:33:37,454 [     scc.git] DEBUG Auto-merging src/fsLists.py
2024-07-24 00:33:37,454 [     scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py
2024-07-24 00:33:37,454 [     scc.git] DEBUG Auto-merging src/fsMonitor.py
2024-07-24 00:33:37,454 [     scc.git] DEBUG Auto-merging src/fsMonitorServer.py
2024-07-24 00:33:37,454 [     scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py
2024-07-24 00:33:37,454 [     scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py
2024-07-24 00:33:37,456 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-24 00:33:37,460 [     scc.git] DEBUG  src/fsAbstractPlatformMonitor.py |  6 +++---
2024-07-24 00:33:37,460 [     scc.git] DEBUG  src/fsDirectory.py               | 46 ++++++++++++++++++++--------------------
2024-07-24 00:33:37,460 [     scc.git] DEBUG  src/fsDropBox.py                 | 24 ++++++++++-----------
2024-07-24 00:33:37,460 [     scc.git] DEBUG  src/fsLists.py                   | 14 ++++++------
2024-07-24 00:33:37,461 [     scc.git] DEBUG  src/fsMac-10-5-Monitor.py        | 10 ++++-----
2024-07-24 00:33:37,461 [     scc.git] DEBUG  src/fsMonitor.py                 | 24 ++++++++++-----------
2024-07-24 00:33:37,461 [     scc.git] DEBUG  src/fsMonitorServer.py           | 10 ++++-----
2024-07-24 00:33:37,461 [     scc.git] DEBUG  src/fsPyinotifyMonitor.py        |  8 +++----
2024-07-24 00:33:37,461 [     scc.git] DEBUG  src/fsWin-XP-Monitor.py          | 20 ++++++++---------
2024-07-24 00:33:37,461 [     scc.git] DEBUG  9 files changed, 81 insertions(+), 81 deletions(-)
2024-07-24 00:33:37,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-24 00:33:37,627 [     scc.git] DEBUG Calling 'git submodule update'
2024-07-24 00:33:37,674 [     scc.git] DEBUG Get sha1 of %s
2024-07-24 00:33:37,675 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-24 00:33:37,679 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-24 00:33:37,724 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-07-24 00:33:37,730 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fc0ca27b6d0> has no local changes
2024-07-24 00:33:37,730 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-dropbox
Already up to date.

Merged PRs:
  - PR 16 joshmoore 'Review all instances of whitelist/blacklist'

Generated by OMERO-python-superbuild-push#125 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/125/)'
2024-07-24 00:33:37,740 [     scc.git] DEBUG [detached HEAD ce45745] merge master -Dorg -Ssuccess-only
2024-07-24 00:33:37,741 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-24 00:33:37,741 [    scc.repo] DEBUG ## PRs found:
2024-07-24 00:33:38,198 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None
2024-07-24 00:33:38,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None
2024-07-24 00:33:39,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None
2024-07-24 00:33:39,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-07-24 00:33:40,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-24 00:33:40,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None
2024-07-24 00:33:41,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2
2024-07-24 00:33:41,041 [    scc.repo] DEBUG   - PR 69 will-moore 'Roi encoder allows Shape None'
2024-07-24 00:33:41,515 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None
2024-07-24 00:33:41,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None
2024-07-24 00:33:42,463 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None
2024-07-24 00:33:42,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None
2024-07-24 00:33:42,907 [    scc.repo] DEBUG ## Branches found:
2024-07-24 00:33:42,907 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-07-24 00:33:42,907 [     scc.git] DEBUG Get sha1 of %s
2024-07-24 00:33:42,907 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-24 00:33:42,912 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-24 00:33:42,917 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-24 00:33:42,917 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-24 00:33:42,921 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-24 00:33:42,926 [     scc.git] DEBUG Already up to date.

2024-07-24 00:33:42,926 [     scc.git] DEBUG Calling 'git fetch origin pull/69/head'
2024-07-24 00:33:43,346 [     scc.git] DEBUG From https://github.com/ome/omero-marshal
2024-07-24 00:33:43,346 [     scc.git] DEBUG  * branch            refs/pull/69/head -> FETCH_HEAD
2024-07-24 00:33:43,352 [     scc.git] DEBUG ## Unique users: []
2024-07-24 00:33:43,352 [     scc.git] DEBUG Get sha1 of %s
2024-07-24 00:33:43,352 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-24 00:33:43,357 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-07-24 00:33:43,363 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-24 00:33:43,367 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca'
2024-07-24 00:33:43,379 [     scc.git] DEBUG Auto-merging tests/unit/conftest.py
2024-07-24 00:33:43,380 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-24 00:33:43,383 [     scc.git] DEBUG  omero_marshal/encode/encoders/roi.py | 5 +++--
2024-07-24 00:33:43,383 [     scc.git] DEBUG  tests/unit/conftest.py               | 5 ++++-
2024-07-24 00:33:43,383 [     scc.git] DEBUG  2 files changed, 7 insertions(+), 3 deletions(-)
2024-07-24 00:33:43,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-24 00:33:43,789 [     scc.git] DEBUG Calling 'git submodule update'
2024-07-24 00:33:43,828 [     scc.git] DEBUG Get sha1 of %s
2024-07-24 00:33:43,828 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-24 00:33:43,832 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-24 00:33:43,869 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-07-24 00:33:43,876 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fc0ca4ba1c0> has no local changes
2024-07-24 00:33:43,876 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-marshal
Excluded PRs:
  - PR 34 chris-allan 'Initial support for Event' (exclude comment)
  - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.

Merged PRs:
  - PR 69 will-moore 'Roi encoder allows Shape None'

Generated by OMERO-python-superbuild-push#125 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/125/)'
2024-07-24 00:33:43,885 [     scc.git] DEBUG [detached HEAD 5bbb670] merge master -Dorg -Ssuccess-only
2024-07-24 00:33:43,885 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-24 00:33:43,886 [    scc.repo] DEBUG ## PRs found:
2024-07-24 00:33:44,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None
2024-07-24 00:33:45,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None
2024-07-24 00:33:45,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None
2024-07-24 00:33:45,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-07-24 00:33:46,491 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-24 00:33:47,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-24 00:33:47,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-07-24 00:33:47,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None
2024-07-24 00:33:48,386 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None
2024-07-24 00:33:48,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None
2024-07-24 00:33:48,845 [    scc.repo] DEBUG   - PR 408 jburel 'remove deprecated method'
2024-07-24 00:33:49,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None
2024-07-24 00:33:49,746 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None
2024-07-24 00:33:50,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None
2024-07-24 00:33:50,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-24 00:33:51,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-24 00:33:51,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None
2024-07-24 00:33:52,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-07-24 00:33:52,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-24 00:33:53,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-24 00:33:53,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-07-24 00:33:54,123 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 None
2024-07-24 00:33:54,564 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None
2024-07-24 00:33:55,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/status HTTP/1.1" 200 None
2024-07-24 00:33:55,003 [    scc.repo] DEBUG   - PR 391 joshmoore 'Add jstack command'
2024-07-24 00:33:55,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/387 HTTP/1.1" 200 None
2024-07-24 00:33:55,488 [    scc.repo] DEBUG   # ... Exclude label: exclude
2024-07-24 00:33:55,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337 HTTP/1.1" 200 None
2024-07-24 00:33:56,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/337/comments HTTP/1.1" 200 None
2024-07-24 00:33:56,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-07-24 00:33:57,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-24 00:33:57,858 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/0df9ec8000befec36dd85b7ff078ce66603e36a5 HTTP/1.1" 200 None
2024-07-24 00:33:58,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/0df9ec8000befec36dd85b7ff078ce66603e36a5?per_page=1 HTTP/1.1" 200 2
2024-07-24 00:33:58,264 [    scc.repo] DEBUG   - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-07-24 00:33:58,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None
2024-07-24 00:33:59,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None
2024-07-24 00:33:59,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-07-24 00:34:00,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-24 00:34:00,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-24 00:34:01,171 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-07-24 00:34:01,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 None
2024-07-24 00:34:02,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None
2024-07-24 00:34:02,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/status HTTP/1.1" 200 None
2024-07-24 00:34:02,537 [    scc.repo] DEBUG   - PR 332 jburel 'Build conda'
2024-07-24 00:34:03,017 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325 HTTP/1.1" 200 None
2024-07-24 00:34:03,513 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/325/comments HTTP/1.1" 200 None
2024-07-24 00:34:04,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None
2024-07-24 00:34:04,516 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None
2024-07-24 00:34:05,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-07-24 00:34:05,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-24 00:34:06,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/09ae8033d77faf0346255eb9644207e02c98709a HTTP/1.1" 200 None
2024-07-24 00:34:06,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/09ae8033d77faf0346255eb9644207e02c98709a?per_page=1 HTTP/1.1" 200 2
2024-07-24 00:34:06,444 [    scc.repo] DEBUG   - PR 299 joshmoore 'Add parents and children to omero obj'
2024-07-24 00:34:06,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/266 HTTP/1.1" 200 None
2024-07-24 00:34:07,420 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-07-24 00:34:07,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-24 00:34:08,307 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/df250605e81b3b5f509b4cddc3186a63d7ba364f HTTP/1.1" 200 None
2024-07-24 00:34:08,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/df250605e81b3b5f509b4cddc3186a63d7ba364f?per_page=1 HTTP/1.1" 200 2
2024-07-24 00:34:08,748 [    scc.repo] DEBUG   - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-07-24 00:34:09,297 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207 HTTP/1.1" 200 None
2024-07-24 00:34:09,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/207/comments HTTP/1.1" 200 None
2024-07-24 00:34:10,396 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-07-24 00:34:10,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-24 00:34:11,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d68e639b52d3b583d12c65164f3edcd0b813a4bb HTTP/1.1" 200 None
2024-07-24 00:34:11,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d68e639b52d3b583d12c65164f3edcd0b813a4bb?per_page=1 HTTP/1.1" 200 2
2024-07-24 00:34:11,892 [    scc.repo] DEBUG   - PR 207 manics 'BlitzGateway.connect raise on error'
2024-07-24 00:34:12,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None
2024-07-24 00:34:12,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None
2024-07-24 00:34:13,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-07-24 00:34:13,817 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-24 00:34:14,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None
2024-07-24 00:34:14,763 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2
2024-07-24 00:34:14,764 [    scc.repo] DEBUG   - PR 199 joshmoore 'user: allow setting default group'
2024-07-24 00:34:15,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194 HTTP/1.1" 200 None
2024-07-24 00:34:15,691 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/194/comments HTTP/1.1" 200 None
2024-07-24 00:34:16,154 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129 HTTP/1.1" 200 None
2024-07-24 00:34:16,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/129/comments HTTP/1.1" 200 None
2024-07-24 00:34:16,644 [    scc.repo] DEBUG ## Branches found:
2024-07-24 00:34:16,644 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-07-24 00:34:16,645 [     scc.git] DEBUG Get sha1 of %s
2024-07-24 00:34:16,645 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-24 00:34:16,650 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-24 00:34:16,653 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-24 00:34:16,654 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-24 00:34:16,658 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-24 00:34:16,662 [     scc.git] DEBUG Already up to date.

2024-07-24 00:34:16,663 [     scc.git] DEBUG Calling 'git fetch origin pull/199/head'
2024-07-24 00:34:17,523 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-07-24 00:34:17,523 [     scc.git] DEBUG  * branch              refs/pull/199/head -> FETCH_HEAD
2024-07-24 00:34:17,529 [     scc.git] DEBUG Calling 'git fetch origin pull/207/head'
2024-07-24 00:34:17,958 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-07-24 00:34:17,958 [     scc.git] DEBUG  * branch              refs/pull/207/head -> FETCH_HEAD
2024-07-24 00:34:17,962 [     scc.git] DEBUG Calling 'git fetch origin pull/266/head'
2024-07-24 00:34:18,402 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-07-24 00:34:18,403 [     scc.git] DEBUG  * branch              refs/pull/266/head -> FETCH_HEAD
2024-07-24 00:34:18,408 [     scc.git] DEBUG Calling 'git fetch origin pull/299/head'
2024-07-24 00:34:18,845 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-07-24 00:34:18,845 [     scc.git] DEBUG  * branch              refs/pull/299/head -> FETCH_HEAD
2024-07-24 00:34:18,850 [     scc.git] DEBUG Calling 'git fetch origin pull/332/head'
2024-07-24 00:34:19,304 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-07-24 00:34:19,304 [     scc.git] DEBUG  * branch              refs/pull/332/head -> FETCH_HEAD
2024-07-24 00:34:19,308 [     scc.git] DEBUG Calling 'git fetch origin pull/337/head'
2024-07-24 00:34:19,683 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-07-24 00:34:19,684 [     scc.git] DEBUG  * branch              refs/pull/337/head -> FETCH_HEAD
2024-07-24 00:34:19,688 [     scc.git] DEBUG Calling 'git fetch origin pull/391/head'
2024-07-24 00:34:20,109 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-07-24 00:34:20,110 [     scc.git] DEBUG  * branch              refs/pull/391/head -> FETCH_HEAD
2024-07-24 00:34:20,114 [     scc.git] DEBUG Calling 'git fetch origin pull/408/head'
2024-07-24 00:34:20,573 [     scc.git] DEBUG From https://github.com/ome/omero-py
2024-07-24 00:34:20,574 [     scc.git] DEBUG  * branch              refs/pull/408/head -> FETCH_HEAD
2024-07-24 00:34:20,578 [     scc.git] DEBUG ## Unique users: []
2024-07-24 00:34:20,578 [     scc.git] DEBUG Get sha1 of %s
2024-07-24 00:34:20,578 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-24 00:34:20,583 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-07-24 00:34:20,596 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-24 00:34:20,601 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec'
2024-07-24 00:34:20,701 [     scc.git] DEBUG Auto-merging src/omero/cli.py
2024-07-24 00:34:20,701 [     scc.git] DEBUG Auto-merging src/omero/plugins/user.py
2024-07-24 00:34:20,717 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-24 00:34:20,721 [     scc.git] DEBUG  src/omero/cli.py          |  6 ++++++
2024-07-24 00:34:20,721 [     scc.git] DEBUG  src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++---
2024-07-24 00:34:20,722 [     scc.git] DEBUG  2 files changed, 39 insertions(+), 3 deletions(-)
2024-07-24 00:34:20,900 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-24 00:34:20,902 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-07-24 00:34:20,913 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-24 00:34:20,917 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 207 (BlitzGateway.connect raise on error) d68e639b52d3b583d12c65164f3edcd0b813a4bb'
2024-07-24 00:34:21,187 [     scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-07-24 00:34:21,187 [     scc.git] DEBUG Auto-merging test/unit/test_gateway.py
2024-07-24 00:34:21,198 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-24 00:34:21,206 [     scc.git] DEBUG  src/omero/gateway/__init__.py | 19 +++++++++++++------
2024-07-24 00:34:21,206 [     scc.git] DEBUG  test/unit/test_gateway.py     | 16 ++++++++++++++++
2024-07-24 00:34:21,206 [     scc.git] DEBUG  2 files changed, 29 insertions(+), 6 deletions(-)
2024-07-24 00:34:21,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-24 00:34:21,394 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-07-24 00:34:21,405 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-24 00:34:21,409 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 266 (errors: use raise_error from cli plugins) df250605e81b3b5f509b4cddc3186a63d7ba364f'
2024-07-24 00:34:21,507 [     scc.git] DEBUG Auto-merging src/omero/plugins/search.py
2024-07-24 00:34:21,530 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-24 00:34:21,534 [     scc.git] DEBUG  src/omero/plugins/search.py | 13 +++++++++----
2024-07-24 00:34:21,534 [     scc.git] DEBUG  1 file changed, 9 insertions(+), 4 deletions(-)
2024-07-24 00:34:21,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-24 00:34:21,822 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...09ae8033d77faf0346255eb9644207e02c98709a'
2024-07-24 00:34:21,834 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-24 00:34:21,840 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 299 (Add parents and children to omero obj) 09ae8033d77faf0346255eb9644207e02c98709a'
2024-07-24 00:34:21,960 [     scc.git] DEBUG Auto-merging src/omero/plugins/obj.py
2024-07-24 00:34:21,960 [     scc.git] DEBUG Auto-merging test/unit/clitest/test_obj.py
2024-07-24 00:34:21,962 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-24 00:34:21,965 [     scc.git] DEBUG  src/omero/plugins/obj.py      | 69 ++++++++++++++++++++++++++++++++++++++++++-
2024-07-24 00:34:21,966 [     scc.git] DEBUG  test/unit/clitest/test_obj.py |  2 +-
2024-07-24 00:34:21,966 [     scc.git] DEBUG  2 files changed, 69 insertions(+), 2 deletions(-)
2024-07-24 00:34:22,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-24 00:34:22,249 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-07-24 00:34:22,261 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-24 00:34:22,265 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc'
2024-07-24 00:34:22,294 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-24 00:34:22,297 [     scc.git] DEBUG  .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++
2024-07-24 00:34:22,297 [     scc.git] DEBUG  connect.py                    | 11 +++++++++++
2024-07-24 00:34:22,297 [     scc.git] DEBUG  2 files changed, 48 insertions(+)
2024-07-24 00:34:22,297 [     scc.git] DEBUG  create mode 100644 .github/workflows/install.yml
2024-07-24 00:34:22,297 [     scc.git] DEBUG  create mode 100644 connect.py
2024-07-24 00:34:22,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-24 00:34:22,666 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-07-24 00:34:22,679 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-24 00:34:22,684 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 337 (bulk.yml depth is passed to xargs) 0df9ec8000befec36dd85b7ff078ce66603e36a5'
2024-07-24 00:34:22,771 [     scc.git] DEBUG Auto-merging src/omero/plugins/import.py
2024-07-24 00:34:22,773 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-24 00:34:22,777 [     scc.git] DEBUG  src/omero/plugins/import.py | 2 ++
2024-07-24 00:34:22,777 [     scc.git] DEBUG  1 file changed, 2 insertions(+)
2024-07-24 00:34:23,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-24 00:34:23,154 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023'
2024-07-24 00:34:23,166 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-24 00:34:23,170 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023'
2024-07-24 00:34:23,298 [     scc.git] DEBUG Auto-merging src/omero/plugins/admin.py
2024-07-24 00:34:23,300 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-24 00:34:23,304 [     scc.git] DEBUG  src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++--
2024-07-24 00:34:23,304 [     scc.git] DEBUG  1 file changed, 59 insertions(+), 2 deletions(-)
2024-07-24 00:34:23,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-24 00:34:23,584 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-07-24 00:34:23,596 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-24 00:34:23,601 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804'
2024-07-24 00:34:23,667 [     scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py
2024-07-24 00:34:23,684 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-24 00:34:23,692 [     scc.git] DEBUG  src/omero/gateway/__init__.py | 36 ------------------------------------
2024-07-24 00:34:23,692 [     scc.git] DEBUG  1 file changed, 36 deletions(-)
2024-07-24 00:34:24,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-24 00:34:24,013 [     scc.git] DEBUG Calling 'git submodule update'
2024-07-24 00:34:24,055 [     scc.git] DEBUG Get sha1 of %s
2024-07-24 00:34:24,056 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-24 00:34:24,061 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-24 00:34:24,104 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-07-24 00:34:24,114 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fc0c91adf10> has no local changes
2024-07-24 00:34:24,114 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-py
Excluded PRs:
  - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
  - PR 387 will-moore 'Numpy pixels type' (label: exclude)
  - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
  - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
  - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.

Merged PRs:
  - PR 199 joshmoore 'user: allow setting default group'
  - PR 207 manics 'BlitzGateway.connect raise on error'
  - PR 266 joshmoore 'errors: use raise_error from cli plugins'
  - PR 299 joshmoore 'Add parents and children to omero obj'
  - PR 332 jburel 'Build conda'
  - PR 337 will-moore 'bulk.yml depth is passed to xargs'
  - PR 391 joshmoore 'Add jstack command'
  - PR 408 jburel 'remove deprecated method'

Generated by OMERO-python-superbuild-push#125 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/125/)'
2024-07-24 00:34:24,124 [     scc.git] DEBUG [detached HEAD 45f47bb0] merge master -Dorg -Ssuccess-only
2024-07-24 00:34:24,125 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-24 00:34:24,125 [     scc.git] INFO  Overriding base-branch from master to develop
2024-07-24 00:34:24,125 [    scc.repo] DEBUG ## PRs found:
2024-07-24 00:34:24,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None
2024-07-24 00:34:25,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216 HTTP/1.1" 200 None
2024-07-24 00:34:25,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/216/comments HTTP/1.1" 200 None
2024-07-24 00:34:26,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206 HTTP/1.1" 200 None
2024-07-24 00:34:26,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/206/comments HTTP/1.1" 200 None
2024-07-24 00:34:27,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None
2024-07-24 00:34:27,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None
2024-07-24 00:34:28,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-07-24 00:34:28,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-24 00:34:29,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None
2024-07-24 00:34:29,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2
2024-07-24 00:34:29,649 [    scc.repo] DEBUG   - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-07-24 00:34:30,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None
2024-07-24 00:34:30,670 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None
2024-07-24 00:34:31,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None
2024-07-24 00:34:31,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None
2024-07-24 00:34:31,695 [    scc.repo] DEBUG ## Branches found:
2024-07-24 00:34:31,696 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-07-24 00:34:31,696 [     scc.git] DEBUG Get sha1 of %s
2024-07-24 00:34:31,696 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-24 00:34:31,700 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop'
2024-07-24 00:34:31,705 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-24 00:34:31,705 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop'
2024-07-24 00:34:31,711 [     scc.git] DEBUG Calling 'git merge --ff-only origin/develop'
2024-07-24 00:34:31,716 [     scc.git] DEBUG Already up to date.

2024-07-24 00:34:31,716 [     scc.git] DEBUG Calling 'git fetch origin pull/202/head'
2024-07-24 00:34:32,171 [     scc.git] DEBUG From https://github.com/ome/omero-scripts
2024-07-24 00:34:32,171 [     scc.git] DEBUG  * branch            refs/pull/202/head -> FETCH_HEAD
2024-07-24 00:34:32,176 [     scc.git] DEBUG ## Unique users: []
2024-07-24 00:34:32,176 [     scc.git] DEBUG Get sha1 of %s
2024-07-24 00:34:32,176 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-24 00:34:32,181 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-07-24 00:34:32,186 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-24 00:34:32,190 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-07-24 00:34:32,257 [     scc.git] DEBUG Auto-merging omero/annotation_scripts/KeyVal_to_csv.py
2024-07-24 00:34:32,257 [     scc.git] DEBUG CONFLICT (content): Merge conflict in omero/annotation_scripts/KeyVal_to_csv.py
2024-07-24 00:34:32,257 [     scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result.
2024-07-24 00:34:32,257 [     scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U'
2024-07-24 00:34:32,262 [     scc.git] DEBUG Calling 'git reset --hard c20d2734b711c659cecea83db6e2ebd7b7013636'
2024-07-24 00:34:32,268 [     scc.git] DEBUG HEAD is now at c20d273 Merge pull request #221 from imcf/fix-typechecking
2024-07-24 00:34:32,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-24 00:34:32,438 [     scc.git] DEBUG Calling 'git merge-base c20d2734b711c659cecea83db6e2ebd7b7013636 1fd6030669613cdb8879cfe6395db8c820fdcf19'
2024-07-24 00:34:32,445 [     scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..c20d2734b711c659cecea83db6e2ebd7b7013636'
2024-07-24 00:34:32,449 [     scc.git] INFO    - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
Conflicting PR. Removed from build [OMERO-python-superbuild-push#125](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/125/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/125/consoleText) for more details.
Possible conflicts:
  - Upstream changes
    - omero/annotation_scripts/KeyVal_to_csv.py

--conflicts

2024-07-24 00:34:32,453 [  scc.config] DEBUG Found github.token
2024-07-24 00:34:32,453 [     scc.git] DEBUG Not adding comment to issue #202, already --conflicts.
2024-07-24 00:34:32,453 [     scc.git] DEBUG Calling 'git submodule update'
2024-07-24 00:34:32,494 [     scc.git] DEBUG Get sha1 of %s
2024-07-24 00:34:32,494 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-24 00:34:32,499 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-24 00:34:32,541 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-07-24 00:34:32,547 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fc0c9163640> has no local changes
2024-07-24 00:34:32,547 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-scripts
Excluded PRs:
  - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
  - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
  - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
  - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.

Conflicting PRs (not included):
  - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'

Generated by OMERO-python-superbuild-push#125 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/125/)'
2024-07-24 00:34:32,557 [     scc.git] DEBUG [detached HEAD b96d029] merge master -Dorg -Ssuccess-only
2024-07-24 00:34:32,557 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-24 00:34:32,558 [    scc.repo] DEBUG ## PRs found:
2024-07-24 00:34:33,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None
2024-07-24 00:34:33,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/568 HTTP/1.1" 200 None
2024-07-24 00:34:34,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/564 HTTP/1.1" 200 None
2024-07-24 00:34:34,528 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/564/comments HTTP/1.1" 200 None
2024-07-24 00:34:35,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde HTTP/1.1" 200 None
2024-07-24 00:34:35,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-24 00:34:36,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-24 00:34:36,551 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde HTTP/1.1" 200 None
2024-07-24 00:34:36,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/091e5fc2d35212271ac71fd66b42c611299d6fde?per_page=1 HTTP/1.1" 200 None
2024-07-24 00:34:37,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde HTTP/1.1" 200 None
2024-07-24 00:34:37,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/091e5fc2d35212271ac71fd66b42c611299d6fde/status HTTP/1.1" 200 None
2024-07-24 00:34:37,977 [    scc.repo] DEBUG   - PR 564 knabar 'New table API endpoints for lower level table access'
2024-07-24 00:34:38,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/555 HTTP/1.1" 200 None
2024-07-24 00:34:39,038 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/555/comments HTTP/1.1" 200 None
2024-07-24 00:34:39,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e HTTP/1.1" 200 None
2024-07-24 00:34:40,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-24 00:34:40,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-24 00:34:41,099 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e HTTP/1.1" 200 None
2024-07-24 00:34:41,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/97e479b717e34179eceea2507d3e69a04b2fec1e?per_page=1 HTTP/1.1" 200 None
2024-07-24 00:34:42,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e HTTP/1.1" 200 None
2024-07-24 00:34:42,448 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/97e479b717e34179eceea2507d3e69a04b2fec1e/status HTTP/1.1" 200 None
2024-07-24 00:34:42,449 [    scc.repo] DEBUG   - PR 555 chris-allan 'Archive status'
2024-07-24 00:34:42,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None
2024-07-24 00:34:43,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None
2024-07-24 00:34:43,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None
2024-07-24 00:34:44,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None
2024-07-24 00:34:44,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-07-24 00:34:45,352 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-24 00:34:45,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-24 00:34:46,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-07-24 00:34:46,806 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 None
2024-07-24 00:34:47,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None
2024-07-24 00:34:47,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/status HTTP/1.1" 200 None
2024-07-24 00:34:47,702 [    scc.repo] DEBUG   - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-07-24 00:34:48,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None
2024-07-24 00:34:48,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None
2024-07-24 00:34:49,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-07-24 00:34:49,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-24 00:34:50,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-24 00:34:50,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-07-24 00:34:51,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 None
2024-07-24 00:34:51,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None
2024-07-24 00:34:51,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/status HTTP/1.1" 200 None
2024-07-24 00:34:51,961 [    scc.repo] DEBUG   - PR 527 will-moore 'Add some initial CSP settings to test'
2024-07-24 00:34:52,425 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None
2024-07-24 00:34:52,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None
2024-07-24 00:34:53,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None
2024-07-24 00:34:53,915 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None
2024-07-24 00:34:54,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None
2024-07-24 00:34:54,419 [    scc.repo] DEBUG ## Branches found:
2024-07-24 00:34:54,419 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-07-24 00:34:54,419 [     scc.git] DEBUG Get sha1 of %s
2024-07-24 00:34:54,419 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-24 00:34:54,423 [     scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master'
2024-07-24 00:34:54,427 [     scc.git] DEBUG ## Merging base to ensure closed PRs are included.
2024-07-24 00:34:54,427 [     scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master'
2024-07-24 00:34:54,432 [     scc.git] DEBUG Calling 'git merge --ff-only origin/master'
2024-07-24 00:34:54,437 [     scc.git] DEBUG Already up to date.

2024-07-24 00:34:54,437 [     scc.git] DEBUG Calling 'git fetch origin pull/527/head'
2024-07-24 00:34:55,271 [     scc.git] DEBUG From https://github.com/ome/omero-web
2024-07-24 00:34:55,271 [     scc.git] DEBUG  * branch                refs/pull/527/head -> FETCH_HEAD
2024-07-24 00:34:55,277 [     scc.git] DEBUG Calling 'git fetch origin pull/534/head'
2024-07-24 00:34:55,755 [     scc.git] DEBUG From https://github.com/ome/omero-web
2024-07-24 00:34:55,756 [     scc.git] DEBUG  * branch                refs/pull/534/head -> FETCH_HEAD
2024-07-24 00:34:55,760 [     scc.git] DEBUG Calling 'git fetch origin pull/555/head'
2024-07-24 00:34:56,789 [     scc.git] DEBUG From https://github.com/ome/omero-web
2024-07-24 00:34:56,790 [     scc.git] DEBUG  * branch                refs/pull/555/head -> FETCH_HEAD
2024-07-24 00:34:56,796 [     scc.git] DEBUG Calling 'git fetch origin pull/564/head'
2024-07-24 00:34:57,194 [     scc.git] DEBUG From https://github.com/ome/omero-web
2024-07-24 00:34:57,194 [     scc.git] DEBUG  * branch                refs/pull/564/head -> FETCH_HEAD
2024-07-24 00:34:57,199 [     scc.git] DEBUG ## Unique users: []
2024-07-24 00:34:57,199 [     scc.git] DEBUG Get sha1 of %s
2024-07-24 00:34:57,200 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-24 00:34:57,204 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-07-24 00:34:57,210 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-24 00:34:57,213 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767'
2024-07-24 00:34:57,288 [     scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-07-24 00:34:57,288 [     scc.git] DEBUG Auto-merging setup.py
2024-07-24 00:34:57,298 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-24 00:34:57,301 [     scc.git] DEBUG  omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++-
2024-07-24 00:34:57,301 [     scc.git] DEBUG  setup.py             |  1 +
2024-07-24 00:34:57,301 [     scc.git] DEBUG  2 files changed, 42 insertions(+), 1 deletion(-)
2024-07-24 00:34:57,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-24 00:34:57,503 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-07-24 00:34:57,510 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-24 00:34:57,514 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005'
2024-07-24 00:34:57,643 [     scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py
2024-07-24 00:34:57,643 [     scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-07-24 00:34:57,645 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-24 00:34:57,649 [     scc.git] DEBUG  omeroweb/webclient/webclient_gateway.py | 2 +-
2024-07-24 00:34:57,649 [     scc.git] DEBUG  omeroweb/webgateway/marshal.py          | 4 ++--
2024-07-24 00:34:57,650 [     scc.git] DEBUG  2 files changed, 3 insertions(+), 3 deletions(-)
2024-07-24 00:34:57,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-24 00:34:57,901 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...97e479b717e34179eceea2507d3e69a04b2fec1e'
2024-07-24 00:34:57,908 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-24 00:34:57,912 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 555 (Archive status) 97e479b717e34179eceea2507d3e69a04b2fec1e'
2024-07-24 00:34:58,085 [     scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py
2024-07-24 00:34:58,086 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-24 00:34:58,091 [     scc.git] DEBUG  omeroweb/webclient/static/webclient/javascript/ome.tree.js     |  3 +++
2024-07-24 00:34:58,091 [     scc.git] DEBUG  .../webclient/annotations/includes/core_metadata.html          |  6 ++++++
2024-07-24 00:34:58,091 [     scc.git] DEBUG  omeroweb/webclient/tree.py                                     | 10 ++++++++--
2024-07-24 00:34:58,091 [     scc.git] DEBUG  omeroweb/webgateway/marshal.py                                 |  1 +
2024-07-24 00:34:58,091 [     scc.git] DEBUG  4 files changed, 18 insertions(+), 2 deletions(-)
2024-07-24 00:34:58,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-24 00:34:58,310 [     scc.git] DEBUG Calling 'git diff --name-only HEAD...091e5fc2d35212271ac71fd66b42c611299d6fde'
2024-07-24 00:34:58,317 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-24 00:34:58,321 [     scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 564 (New table API endpoints for lower level table access) 091e5fc2d35212271ac71fd66b42c611299d6fde'
2024-07-24 00:34:58,369 [     scc.git] DEBUG Auto-merging omeroweb/settings.py
2024-07-24 00:34:58,370 [     scc.git] DEBUG Auto-merging omeroweb/webgateway/views.py
2024-07-24 00:34:58,371 [     scc.git] DEBUG Merge made by the 'ort' strategy.
2024-07-24 00:34:58,376 [     scc.git] DEBUG  omeroweb/settings.py         |   7 ++
2024-07-24 00:34:58,376 [     scc.git] DEBUG  omeroweb/webgateway/urls.py  |  29 +++++++
2024-07-24 00:34:58,376 [     scc.git] DEBUG  omeroweb/webgateway/views.py | 175 ++++++++++++++++++++++++++++++++++++++++++-
2024-07-24 00:34:58,376 [     scc.git] DEBUG  3 files changed, 210 insertions(+), 1 deletion(-)
2024-07-24 00:34:58,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-24 00:34:58,733 [     scc.git] DEBUG Calling 'git submodule update'
2024-07-24 00:34:58,777 [     scc.git] DEBUG Get sha1 of %s
2024-07-24 00:34:58,777 [     scc.git] DEBUG Calling 'git rev-parse HEAD'
2024-07-24 00:34:58,781 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-24 00:34:58,822 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-07-24 00:34:58,846 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fc0c91784f0> has no local changes
2024-07-24 00:34:58,846 [     scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-web
Excluded PRs:
  - PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
  - PR 535 will-moore 'Initial working browser history' (stage: draft)
  - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.

Merged PRs:
  - PR 527 will-moore 'Add some initial CSP settings to test'
  - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
  - PR 555 chris-allan 'Archive status'
  - PR 564 knabar 'New table API endpoints for lower level table access'

Generated by OMERO-python-superbuild-push#125 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/125/)'
2024-07-24 00:34:58,866 [     scc.git] DEBUG [detached HEAD f81284870] merge master -Dorg -Ssuccess-only
2024-07-24 00:34:58,867 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-24 00:34:58,867 [     scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path'
2024-07-24 00:34:58,915 [  scc.config] DEBUG Found submodule.omero-dropbox.url
2024-07-24 00:34:59,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-24 00:34:59,149 [  scc.config] DEBUG Found submodule.omero-marshal.url
2024-07-24 00:34:59,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-24 00:34:59,577 [  scc.config] DEBUG Found submodule.omero-py.url
2024-07-24 00:34:59,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-24 00:34:59,997 [  scc.config] DEBUG Found submodule.omero-scripts.url
2024-07-24 00:35:00,397 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-24 00:35:00,408 [  scc.config] DEBUG Found submodule.omero-web.url
2024-07-24 00:35:00,791 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None
2024-07-24 00:35:00,801 [     scc.git] DEBUG Calling 'git status --porcelain'
2024-07-24 00:35:00,831 [     scc.git] DEBUG <scc.git.GitRepository object at 0x7fc0ca26f310> has local changes
2024-07-24 00:35:00,831 [     scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only

Repository: ome/omero-python-superbuild
Already up to date.


Repository: ome/omero-dropbox
Already up to date.

Merged PRs:
  - PR 16 joshmoore 'Review all instances of whitelist/blacklist'

Repository: ome/omero-marshal
Excluded PRs:
  - PR 34 chris-allan 'Initial support for Event' (exclude comment)
  - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
Already up to date.

Merged PRs:
  - PR 69 will-moore 'Roi encoder allows Shape None'

Repository: ome/omero-py
Excluded PRs:
  - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
  - PR 387 will-moore 'Numpy pixels type' (label: exclude)
  - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
  - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
  - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
Already up to date.

Merged PRs:
  - PR 199 joshmoore 'user: allow setting default group'
  - PR 207 manics 'BlitzGateway.connect raise on error'
  - PR 266 joshmoore 'errors: use raise_error from cli plugins'
  - PR 299 joshmoore 'Add parents and children to omero obj'
  - PR 332 jburel 'Build conda'
  - PR 337 will-moore 'bulk.yml depth is passed to xargs'
  - PR 391 joshmoore 'Add jstack command'
  - PR 408 jburel 'remove deprecated method'

Repository: ome/omero-scripts
Excluded PRs:
  - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
  - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
  - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
  - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
Already up to date.

Conflicting PRs (not included):
  - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'

Repository: ome/omero-web
Excluded PRs:
  - PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
  - PR 535 will-moore 'Initial working browser history' (stage: draft)
  - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
Already up to date.

Merged PRs:
  - PR 527 will-moore 'Add some initial CSP settings to test'
  - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
  - PR 555 chris-allan 'Archive status'
  - PR 564 knabar 'New table API endpoints for lower level table access'

Generated by OMERO-python-superbuild-push#125 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/125/)'
2024-07-24 00:35:00,841 [     scc.git] DEBUG [detached HEAD 9078d90] merge master -Dorg -Ssuccess-only
2024-07-24 00:35:00,841 [   scc.merge] INFO  Repository: ome/omero-python-superbuild
2024-07-24 00:35:00,841 [     scc.git] DEBUG  6 files changed, 10 insertions(+), 10 deletions(-)
2024-07-24 00:35:00,841 [   scc.merge] INFO  Already up to date.
2024-07-24 00:35:00,841 [   scc.merge] INFO  
2024-07-24 00:35:00,841 [   scc.merge] INFO  
2024-07-24 00:35:00,842 [   scc.merge] INFO  Repository: ome/omero-dropbox
2024-07-24 00:35:00,842 [   scc.merge] INFO  Already up to date.
2024-07-24 00:35:00,842 [   scc.merge] INFO  
2024-07-24 00:35:00,842 [   scc.merge] INFO  Merged PRs:
2024-07-24 00:35:00,842 [   scc.merge] INFO    - PR 16 joshmoore 'Review all instances of whitelist/blacklist'
2024-07-24 00:35:00,842 [   scc.merge] INFO  
2024-07-24 00:35:00,842 [   scc.merge] INFO  Repository: ome/omero-marshal
2024-07-24 00:35:00,842 [   scc.merge] INFO  Excluded PRs:
2024-07-24 00:35:00,842 [   scc.merge] INFO    - PR 34 chris-allan 'Initial support for Event' (exclude comment)
2024-07-24 00:35:00,842 [   scc.merge] INFO    - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment)
2024-07-24 00:35:00,842 [   scc.merge] INFO  Already up to date.
2024-07-24 00:35:00,842 [   scc.merge] INFO  
2024-07-24 00:35:00,842 [   scc.merge] INFO  Merged PRs:
2024-07-24 00:35:00,842 [   scc.merge] INFO    - PR 69 will-moore 'Roi encoder allows Shape None'
2024-07-24 00:35:00,842 [   scc.merge] INFO  
2024-07-24 00:35:00,842 [   scc.merge] INFO  Repository: ome/omero-py
2024-07-24 00:35:00,842 [   scc.merge] INFO  Excluded PRs:
2024-07-24 00:35:00,842 [   scc.merge] INFO    - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure)
2024-07-24 00:35:00,842 [   scc.merge] INFO    - PR 387 will-moore 'Numpy pixels type' (label: exclude)
2024-07-24 00:35:00,842 [   scc.merge] INFO    - PR 325 JulianHn 'Addding support for other encodings than utf-8 in DownloadingOriginalFileProvider' (user: JulianHn)
2024-07-24 00:35:00,842 [   scc.merge] INFO    - PR 194 manics 'Support Python 3 asyncio concurrency' (stage: draft)
2024-07-24 00:35:00,842 [   scc.merge] INFO    - PR 129 dominikl 'Add option to create new ThumbnailStore connection' (exclude comment)
2024-07-24 00:35:00,842 [   scc.merge] INFO  Already up to date.
2024-07-24 00:35:00,842 [   scc.merge] INFO  
2024-07-24 00:35:00,842 [   scc.merge] INFO  Merged PRs:
2024-07-24 00:35:00,842 [   scc.merge] INFO    - PR 199 joshmoore 'user: allow setting default group'
2024-07-24 00:35:00,842 [   scc.merge] INFO    - PR 207 manics 'BlitzGateway.connect raise on error'
2024-07-24 00:35:00,842 [   scc.merge] INFO    - PR 266 joshmoore 'errors: use raise_error from cli plugins'
2024-07-24 00:35:00,842 [   scc.merge] INFO    - PR 299 joshmoore 'Add parents and children to omero obj'
2024-07-24 00:35:00,842 [   scc.merge] INFO    - PR 332 jburel 'Build conda'
2024-07-24 00:35:00,842 [   scc.merge] INFO    - PR 337 will-moore 'bulk.yml depth is passed to xargs'
2024-07-24 00:35:00,842 [   scc.merge] INFO    - PR 391 joshmoore 'Add jstack command'
2024-07-24 00:35:00,842 [   scc.merge] INFO    - PR 408 jburel 'remove deprecated method'
2024-07-24 00:35:00,842 [   scc.merge] INFO  
2024-07-24 00:35:00,842 [   scc.merge] INFO  Repository: ome/omero-scripts
2024-07-24 00:35:00,842 [   scc.merge] INFO  Excluded PRs:
2024-07-24 00:35:00,843 [   scc.merge] INFO    - PR 216 Tom-TBT 'Key-value pair scripts enhancement' (user: Tom-TBT)
2024-07-24 00:35:00,843 [   scc.merge] INFO    - PR 206 Rdornier 'Adding a script that saves data owner as key-value pair' (user: Rdornier)
2024-07-24 00:35:00,843 [   scc.merge] INFO    - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn)
2024-07-24 00:35:00,843 [   scc.merge] INFO    - PR 103 joshmoore 'Script for calculating min/max' (exclude comment)
2024-07-24 00:35:00,843 [   scc.merge] INFO  Already up to date.
2024-07-24 00:35:00,843 [   scc.merge] INFO  
2024-07-24 00:35:00,843 [   scc.merge] INFO  Conflicting PRs (not included):
2024-07-24 00:35:00,843 [   scc.merge] INFO    - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py'
2024-07-24 00:35:00,843 [   scc.merge] INFO  
2024-07-24 00:35:00,843 [   scc.merge] INFO  Repository: ome/omero-web
2024-07-24 00:35:00,843 [   scc.merge] INFO  Excluded PRs:
2024-07-24 00:35:00,843 [   scc.merge] INFO    - PR 568 Tom-TBT 'Perceptibly uniform luts for OMERO.web' (user: Tom-TBT)
2024-07-24 00:35:00,843 [   scc.merge] INFO    - PR 535 will-moore 'Initial working browser history' (stage: draft)
2024-07-24 00:35:00,843 [   scc.merge] INFO    - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure)
2024-07-24 00:35:00,843 [   scc.merge] INFO  Already up to date.
2024-07-24 00:35:00,843 [   scc.merge] INFO  
2024-07-24 00:35:00,843 [   scc.merge] INFO  Merged PRs:
2024-07-24 00:35:00,843 [   scc.merge] INFO    - PR 527 will-moore 'Add some initial CSP settings to test'
2024-07-24 00:35:00,843 [   scc.merge] INFO    - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly'
2024-07-24 00:35:00,843 [   scc.merge] INFO    - PR 555 chris-allan 'Archive status'
2024-07-24 00:35:00,843 [   scc.merge] INFO    - PR 564 knabar 'New table API endpoints for lower level table access'
2024-07-24 00:35:00,843 [   scc.merge] INFO  
2024-07-24 00:35:00,843 [   scc.merge] DEBUG Cleaning remote branches created for merging
2024-07-24 00:35:00,843 [     scc.git] DEBUG Calling 'git remote'
2024-07-24 00:35:00,848 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox
2024-07-24 00:35:00,848 [     scc.git] DEBUG Calling 'git remote'
2024-07-24 00:35:00,853 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-24 00:35:00,853 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal
2024-07-24 00:35:00,853 [     scc.git] DEBUG Calling 'git remote'
2024-07-24 00:35:00,857 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-24 00:35:00,858 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py
2024-07-24 00:35:00,858 [     scc.git] DEBUG Calling 'git remote'
2024-07-24 00:35:00,864 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-24 00:35:00,864 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts
2024-07-24 00:35:00,864 [     scc.git] DEBUG Calling 'git remote'
2024-07-24 00:35:00,870 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
2024-07-24 00:35:00,870 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web
2024-07-24 00:35:00,870 [     scc.git] DEBUG Calling 'git remote'
2024-07-24 00:35:00,876 [     scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push
Update component versions
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
  File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
    download_blitz_target()
  File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
    resp = urlopen(loc)
  File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
    return opener.open(url, data, timeout)
  File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
    response = meth(req, response)
  File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
    response = self.parent.error(
  File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
    return self._call_chain(*args)
  File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
    result = func(*args)
  File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
    raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.5.5-python.zip ...
Traceback (most recent call last):
  File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module>
    download_blitz_target()
  File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target
    resp = urlopen(loc)
  File "/usr/lib64/python3.9/urllib/request.py", line 214, in urlopen
    return opener.open(url, data, timeout)
  File "/usr/lib64/python3.9/urllib/request.py", line 523, in open
    response = meth(req, response)
  File "/usr/lib64/python3.9/urllib/request.py", line 632, in http_response
    response = self.parent.error(
  File "/usr/lib64/python3.9/urllib/request.py", line 561, in error
    return self._call_chain(*args)
  File "/usr/lib64/python3.9/urllib/request.py", line 494, in _call_chain
    result = func(*args)
  File "/usr/lib64/python3.9/urllib/request.py", line 641, in http_error_default
    raise HTTPError(req.full_url, code, msg, hdrs, fp)
urllib.error.HTTPError: HTTP Error 404: Not Found
grep: build.gradle: No such file or directory
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Up-to-date: 
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
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Up-to-date: 
grep: build.gradle: No such file or directory
Up-to-date: 
Up-to-date: 
Commit all component version changes
Entering 'omero-dropbox'
Entering 'omero-marshal'
Entering 'omero-py'
Entering 'omero-scripts'
Entering 'omero-web'
Entering 'omero-dropbox'
HEAD detached from a4307f4
nothing to commit, working tree clean
Entering 'omero-marshal'
HEAD detached from cca4c2f
nothing to commit, working tree clean
Entering 'omero-py'
HEAD detached from 749a68ac
nothing to commit, working tree clean
Entering 'omero-scripts'
HEAD detached from c20d273
nothing to commit, working tree clean
Entering 'omero-web'
HEAD detached from ba8c7e23c
nothing to commit, working tree clean
HEAD detached from 508496f
nothing to commit, working tree clean
2024-07-24 00:35:32,276 [    scc.push] INFO  Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci
[Pipeline] archiveArtifacts
Archiving artifacts
[Pipeline] }
[Pipeline] // node
[Pipeline] End of Pipeline
Finished: SUCCESS