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Downloaded from central: https://repo.maven.apache.org/maven2/org/xerial/sqlite-jdbc/3.49.1.0/sqlite-jdbc-3.49.1.0.jar (14 MB at 19 MB/s)
#14 294.4 Downloading from unidata.releases: https://artifacts.unidata.ucar.edu/repository/unidata-releases/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#14 294.4 Downloading from unidata.releases: https://artifacts.unidata.ucar.edu/repository/unidata-releases/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
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Downloaded from unidata.releases: https://artifacts.unidata.ucar.edu/repository/unidata-releases/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar (80 kB at 24 kB/s)
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Downloaded from unidata.releases: https://artifacts.unidata.ucar.edu/repository/unidata-releases/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar (4.3 MB at 16 kB/s)
#14 555.3 [[1;34mINFO[m]
#14 555.3 [[1;34mINFO[m] [1m--- [0;32mmaven-clean-plugin:3.1.0:clean[m [1m(default-clean)[m @ [36mformats-gpl[0;1m ---[m
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#14 555.3 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mformats-gpl[0;1m ---[m
#14 555.3 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 555.3 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 555.3 [[1;34mINFO[m] Storing buildNumber: 04b453e5836816f838b12379cc608f2637c22927 at timestamp: 1754180257850
#14 555.3 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 555.3 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 555.3
#14 555.3 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 555.3 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 555.3 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 555.3 [[1;34mINFO[m]
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#14 555.3 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 555.3 [[1;34mINFO[m] Copying 2 resources
#14 555.3 [[1;34mINFO[m] skip non existing resourceDirectory /bio-formats-build/bioformats/components/formats-gpl/lib
#14 555.3 [[1;34mINFO[m] Copying 0 resource
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#14 555.3 [[1;34mINFO[m] Recompiling the module because of [1mchanged dependency[m.
#14 555.3 [[1;34mINFO[m] Compiling 177 source files with javac [debug release 8] to target/classes
#14 557.8 [[1;33mWARNING[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/LeicaReader.java:[1321,42] non-varargs call of varargs method with inexact argument type for last parameter;
#14 557.8 cast to java.lang.Object for a varargs call
#14 557.8 cast to java.lang.Object[] for a non-varargs call and to suppress this warning
#14 557.8 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java: Some input files use or override a deprecated API.
#14 557.8 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java: Recompile with -Xlint:deprecation for details.
#14 557.8 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/ImarisHDFReader.java: Some input files use unchecked or unsafe operations.
#14 557.8 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/ImarisHDFReader.java: Recompile with -Xlint:unchecked for details.
#14 557.8 [[1;34mINFO[m]
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#14 557.8 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 557.8 [[1;34mINFO[m] Copying 24 resources
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#14 557.8 [[1;34mINFO[m] Recompiling the module because of [1mchanged dependency[m.
#14 557.8 [[1;34mINFO[m] Compiling 23 source files with javac [debug release 8] to target/test-classes
#14 558.0 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java: /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java uses unchecked or unsafe operations.
#14 558.0 [[1;34mINFO[m] /bio-formats-build/bioformats/components/formats-gpl/test/loci/formats/utests/InOutCurrentTest.java: Recompile with -Xlint:unchecked for details.
#14 558.0 [[1;34mINFO[m]
#14 558.0 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(default-test)[m @ [36mformats-gpl[0;1m ---[m
#14 558.0 [[1;34mINFO[m]
#14 558.0 [[1;34mINFO[m] -------------------------------------------------------
#14 558.0 [[1;34mINFO[m] T E S T S
#14 558.0 [[1;34mINFO[m] -------------------------------------------------------
#14 558.2 [[1;34mINFO[m] Running [1mTestSuite[m
#14 559.3 2025-08-03 00:17:41,890 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@78aea4b9 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 559.3 2025-08-03 00:17:41,894 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@69c79f09 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 559.4 2025-08-03 00:17:41,971 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@48e64352 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 559.4 2025-08-03 00:17:41,971 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@7249dadf reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 559.5 2025-08-03 00:17:42,024 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@7048f722 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 559.5 2025-08-03 00:17:42,025 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@c074c0c reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 559.5 2025-08-03 00:17:42,071 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@3c1e3314 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 559.5 2025-08-03 00:17:42,071 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@26f143ed reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 559.6 2025-08-03 00:17:42,193 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@22d6cac2 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 559.6 2025-08-03 00:17:42,193 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@30cdae70 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 559.7 2025-08-03 00:17:42,236 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@28782602 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 559.7 2025-08-03 00:17:42,236 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@c96a4ea reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 559.7 2025-08-03 00:17:42,280 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@6622a690 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 559.7 2025-08-03 00:17:42,280 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@6b9c69a9 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 559.8 2025-08-03 00:17:42,337 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.Laser@5d05ef57 reference to urn:lsid:foo.bar.com:LightSource:123789 missing from object hierarchy.
#14 559.8 2025-08-03 00:17:42,338 [main] WARN ome.xml.model.OMEModelImpl - ome.xml.model.FilterSet@213deac2 reference to urn:lsid:foo.bar.com:Dichroic:123456 missing from object hierarchy.
#14 560.1 [[1;34mINFO[m] [1;32mTests run: [0;1;32m99[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.875 s - in [1mTestSuite[m
#14 560.4 [[1;34mINFO[m]
#14 560.4 [[1;34mINFO[m] Results:
#14 560.4 [[1;34mINFO[m]
#14 560.4 [[1;34mINFO[m] [1;32mTests run: 99, Failures: 0, Errors: 0, Skipped: 0[m
#14 560.4 [[1;34mINFO[m]
#14 560.4 [[1;34mINFO[m]
#14 560.4 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(missing-mdb-test)[m @ [36mformats-gpl[0;1m ---[m
#14 560.4 [[1;34mINFO[m]
#14 560.4 [[1;34mINFO[m] -------------------------------------------------------
#14 560.4 [[1;34mINFO[m] T E S T S
#14 560.4 [[1;34mINFO[m] -------------------------------------------------------
#14 560.6 [[1;34mINFO[m] Running [1mTestSuite[m
#14 561.0 [[1;34mINFO[m] [1;32mTests run: [0;1;32m1[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.414 s - in [1mTestSuite[m
#14 561.3 [[1;34mINFO[m]
#14 561.3 [[1;34mINFO[m] Results:
#14 561.3 [[1;34mINFO[m]
#14 561.3 [[1;34mINFO[m] [1;32mTests run: 1, Failures: 0, Errors: 0, Skipped: 0[m
#14 561.3 [[1;34mINFO[m]
#14 561.3 [[1;34mINFO[m]
#14 561.3 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(missing-poi-test)[m @ [36mformats-gpl[0;1m ---[m
#14 561.3 [[1;34mINFO[m]
#14 561.3 [[1;34mINFO[m] -------------------------------------------------------
#14 561.3 [[1;34mINFO[m] T E S T S
#14 561.3 [[1;34mINFO[m] -------------------------------------------------------
#14 561.5 [[1;34mINFO[m] Running [1mTestSuite[m
#14 561.9 [[1;34mINFO[m] [1;32mTests run: [0;1;32m1[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.392 s - in [1mTestSuite[m
#14 562.2 [[1;34mINFO[m]
#14 562.2 [[1;34mINFO[m] Results:
#14 562.2 [[1;34mINFO[m]
#14 562.2 [[1;34mINFO[m] [1;32mTests run: 1, Failures: 0, Errors: 0, Skipped: 0[m
#14 562.2 [[1;34mINFO[m]
#14 562.2 [[1;34mINFO[m]
#14 562.2 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(missing-netcdf-test)[m @ [36mformats-gpl[0;1m ---[m
#14 562.2 [[1;34mINFO[m]
#14 562.2 [[1;34mINFO[m] -------------------------------------------------------
#14 562.2 [[1;34mINFO[m] T E S T S
#14 562.2 [[1;34mINFO[m] -------------------------------------------------------
#14 562.4 [[1;34mINFO[m] Running [1mTestSuite[m
#14 562.8 [[1;34mINFO[m] [1;32mTests run: [0;1;32m1[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.411 s - in [1mTestSuite[m
#14 563.1 [[1;34mINFO[m]
#14 563.1 [[1;34mINFO[m] Results:
#14 563.1 [[1;34mINFO[m]
#14 563.1 [[1;34mINFO[m] [1;32mTests run: 1, Failures: 0, Errors: 0, Skipped: 0[m
#14 563.1 [[1;34mINFO[m]
#14 563.1 [[1;34mINFO[m]
#14 563.1 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:jar[m [1m(default-jar)[m @ [36mformats-gpl[0;1m ---[m
#14 563.1 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.3.0-SNAPSHOT.jar
#14 563.2 [[1;34mINFO[m]
#14 563.2 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mformats-gpl[0;1m >>>[m
#14 563.2 [[1;34mINFO[m]
#14 563.2 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mformats-gpl[0;1m ---[m
#14 563.2 [[1;34mINFO[m]
#14 563.2 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mformats-gpl[0;1m ---[m
#14 563.2 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 563.2 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 563.2 [[1;34mINFO[m] Storing buildNumber: 04b453e5836816f838b12379cc608f2637c22927 at timestamp: 1754180265736
#14 563.2 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 563.2 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 563.2
#14 563.2 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/formats-gpl' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 563.2 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/formats-gpl
#14 563.2 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 563.2 [[1;34mINFO[m]
#14 563.2 [[1;34mINFO[m] [1m<<< [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m < [0;1mgenerate-sources[m @ [36mformats-gpl[0;1m <<<[m
#14 563.2 [[1;34mINFO[m]
#14 563.2 [[1;34mINFO[m]
#14 563.2 [[1;34mINFO[m] [1m--- [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[m @ [36mformats-gpl[0;1m ---[m
#14 563.2 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.3.0-SNAPSHOT-sources.jar
#14 563.3 [[1;34mINFO[m]
#14 563.3 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:test-jar[m [1m(default)[m @ [36mformats-gpl[0;1m ---[m
#14 563.3 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.3.0-SNAPSHOT-tests.jar
#14 563.3 [[1;34mINFO[m]
#14 563.3 [[1;34mINFO[m] [1m--- [0;32mmaven-install-plugin:2.5.2:install[m [1m(default-install)[m @ [36mformats-gpl[0;1m ---[m
#14 563.3 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.3.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/formats-gpl/8.3.0-SNAPSHOT/formats-gpl-8.3.0-SNAPSHOT.jar
#14 563.3 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.3.0-SNAPSHOT/formats-gpl-8.3.0-SNAPSHOT.pom
#14 563.3 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.3.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/formats-gpl/8.3.0-SNAPSHOT/formats-gpl-8.3.0-SNAPSHOT-sources.jar
#14 563.3 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/formats-gpl/target/formats-gpl-8.3.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/formats-gpl/8.3.0-SNAPSHOT/formats-gpl-8.3.0-SNAPSHOT-tests.jar
#14 563.3 [[1;34mINFO[m]
#14 563.3 [[1;34mINFO[m] [1m----------------------< [0;36mome:bio-formats_plugins[0;1m >-----------------------[m
#14 563.3 [[1;34mINFO[m] [1mBuilding Bio-Formats Plugins for ImageJ 8.3.0-SNAPSHOT [17/24][m
#14 563.3 [[1;34mINFO[m] [1m--------------------------------[ jar ]---------------------------------[m
#14 563.3 Downloading from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.pom
#14 563.3 Progress (1): 4.1/7.9 kB
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#14 563.3 Downloading from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.jar
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Downloaded from central: https://repo.maven.apache.org/maven2/net/imagej/ij/1.54c/ij-1.54c.jar (2.5 MB at 19 MB/s)
#14 563.5 [[1;34mINFO[m]
#14 563.5 [[1;34mINFO[m] [1m--- [0;32mmaven-clean-plugin:3.1.0:clean[m [1m(default-clean)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 563.5 [[1;34mINFO[m]
#14 563.5 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 563.5 [[1;34mINFO[m]
#14 563.5 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 563.5 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 563.5 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 563.5 [[1;34mINFO[m] Storing buildNumber: 04b453e5836816f838b12379cc608f2637c22927 at timestamp: 1754180266031
#14 563.5 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 563.5 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 563.5
#14 563.5 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 563.5 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 563.5 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 563.5 [[1;34mINFO[m]
#14 563.5 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:resources[m [1m(default-resources)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 563.5 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 563.5 [[1;34mINFO[m] Copying 3 resources
#14 563.5 [[1;34mINFO[m] skip non existing resourceDirectory /bio-formats-build/bioformats/components/bio-formats-plugins/lib
#14 563.5 [[1;34mINFO[m] Copying 0 resource
#14 563.5 [[1;34mINFO[m] Copying 0 resource
#14 563.5 [[1;34mINFO[m]
#14 563.5 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.14.0:compile[m [1m(default-compile)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 563.5 [[1;34mINFO[m] Recompiling the module because of [1mchanged dependency[m.
#14 563.5 [[1;34mINFO[m] Compiling 70 source files with javac [debug release 8] to target/classes
#14 564.0 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java: Some input files use or override a deprecated API.
#14 564.0 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java: Recompile with -Xlint:deprecation for details.
#14 564.0 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#14 564.0 [[1;34mINFO[m] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java: Recompile with -Xlint:unchecked for details.
#14 564.0 [[1;34mINFO[m]
#14 564.0 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:testResources[m [1m(default-testResources)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 564.0 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 564.0 [[1;34mINFO[m] Copying 1 resource
#14 564.0 [[1;34mINFO[m]
#14 564.0 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.14.0:testCompile[m [1m(default-testCompile)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 564.0 [[1;34mINFO[m] Recompiling the module because of [1mchanged dependency[m.
#14 564.0 [[1;34mINFO[m] Compiling 3 source files with javac [debug release 8] to target/test-classes
#14 564.2 [[1;34mINFO[m]
#14 564.2 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(default-test)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 564.2 [[1;34mINFO[m]
#14 564.2 [[1;34mINFO[m] -------------------------------------------------------
#14 564.2 [[1;34mINFO[m] T E S T S
#14 564.2 [[1;34mINFO[m] -------------------------------------------------------
#14 564.3 [[1;34mINFO[m] Running [1mTestSuite[m
#14 565.5 Warning: Data has too many channels for Colorized color mode
#14 565.6 Warning: Data has too many channels for Colorized color mode
#14 565.6 Warning: Data has too many channels for Colorized color mode
#14 565.7 Warning: Data has too many channels for Colorized color mode
#14 565.7 Warning: Data has too many channels for Colorized color mode
#14 565.7 Warning: Data has too many channels for Colorized color mode
#14 565.8 Warning: Data has too many channels for Colorized color mode
#14 565.8 Warning: Data has too many channels for Colorized color mode
#14 565.9 Warning: Data has too many channels for Composite color mode
#14 565.9 Warning: Data has too many channels for Composite color mode
#14 566.2 Warning: Data has too many channels for Composite color mode
#14 566.2 Warning: Data has too many channels for Composite color mode
#14 566.2 Warning: Data has too many channels for Composite color mode
#14 566.2 Warning: Data has too many channels for Composite color mode
#14 566.2 Warning: Data has too many channels for Composite color mode
#14 566.2 Warning: Data has too many channels for Composite color mode
#14 566.2 Warning: Data has too many channels for Composite color mode
#14 566.2 Warning: Data has too many channels for Composite color mode
#14 566.2 Warning: Data has too many channels for Composite color mode
#14 566.2 Warning: Data has too many channels for Composite color mode
#14 566.3 Warning: Data has too many channels for Composite color mode
#14 566.3 Warning: Data has too many channels for Composite color mode
#14 566.3 Warning: Data has too many channels for Composite color mode
#14 566.3 Warning: Data has too many channels for Composite color mode
#14 566.3 Warning: Data has too many channels for Composite color mode
#14 566.3 Warning: Data has too many channels for Composite color mode
#14 566.6 Warning: Data has too many channels for Composite color mode
#14 566.6 Warning: Data has too many channels for Composite color mode
#14 566.6 Warning: Data has too many channels for Composite color mode
#14 566.6 Warning: Data has too many channels for Composite color mode
#14 566.6 Warning: Data has too many channels for Composite color mode
#14 566.6 Warning: Data has too many channels for Composite color mode
#14 566.7 Warning: Data has too many channels for Composite color mode
#14 566.7 Warning: Data has too many channels for Composite color mode
#14 566.7 Warning: Data has too many channels for Composite color mode
#14 566.7 Warning: Data has too many channels for Composite color mode
#14 566.7 Warning: Data has too many channels for Composite color mode
#14 566.7 Warning: Data has too many channels for Composite color mode
#14 566.7 Warning: Data has too many channels for Composite color mode
#14 566.7 Warning: Data has too many channels for Composite color mode
#14 566.7 Warning: Data has too many channels for Composite color mode
#14 566.7 Warning: Data has too many channels for Composite color mode
#14 566.7 Warning: Data has too many channels for Composite color mode
#14 566.8 Warning: Data has too many channels for Composite color mode
#14 567.1 Warning: Data has too many channels for Composite color mode
#14 567.1 Warning: Data has too many channels for Composite color mode
#14 567.1 Warning: Data has too many channels for Composite color mode
#14 567.1 Warning: Data has too many channels for Composite color mode
#14 567.1 Warning: Data has too many channels for Composite color mode
#14 567.1 Warning: Data has too many channels for Composite color mode
#14 567.1 Warning: Data has too many channels for Composite color mode
#14 567.2 Warning: Data has too many channels for Composite color mode
#14 567.2 Warning: Data has too many channels for Composite color mode
#14 567.2 Warning: Data has too many channels for Composite color mode
#14 567.2 Warning: Data has too many channels for Composite color mode
#14 567.2 Warning: Data has too many channels for Composite color mode
#14 567.2 Warning: Data has too many channels for Composite color mode
#14 567.2 Warning: Data has too many channels for Composite color mode
#14 567.2 Warning: Data has too many channels for Composite color mode
#14 567.2 Warning: Data has too many channels for Composite color mode
#14 567.6 Warning: Data has too many channels for Composite color mode
#14 567.6 Warning: Data has too many channels for Composite color mode
#14 567.6 Warning: Data has too many channels for Composite color mode
#14 567.6 Warning: Data has too many channels for Composite color mode
#14 567.6 Warning: Data has too many channels for Composite color mode
#14 567.6 Warning: Data has too many channels for Composite color mode
#14 567.6 Warning: Data has too many channels for Composite color mode
#14 567.6 Warning: Data has too many channels for Composite color mode
#14 567.6 Warning: Data has too many channels for Composite color mode
#14 567.7 Warning: Data has too many channels for Composite color mode
#14 567.7 Warning: Data has too many channels for Composite color mode
#14 567.7 Warning: Data has too many channels for Composite color mode
#14 567.7 Warning: Data has too many channels for Composite color mode
#14 567.7 Warning: Data has too many channels for Composite color mode
#14 567.7 Warning: Data has too many channels for Composite color mode
#14 567.7 Warning: Data has too many channels for Composite color mode
#14 567.8 Warning: Data has too many channels for Custom color mode
#14 567.8 Warning: Data has too many channels for Custom color mode
#14 567.8 Warning: Data has too many channels for Custom color mode
#14 567.8 Warning: Data has too many channels for Custom color mode
#14 567.8 Warning: Data has too many channels for Custom color mode
#14 567.9 Warning: Data has too many channels for Custom color mode
#14 567.9 Warning: Data has too many channels for Custom color mode
#14 567.9 Warning: Data has too many channels for Custom color mode
#14 567.9 Warning: Data has too many channels for Default color mode
#14 568.0 Warning: Data has too many channels for Default color mode
#14 568.0 Warning: Data has too many channels for Default color mode
#14 568.0 Warning: Data has too many channels for Default color mode
#14 568.0 Warning: Data has too many channels for Default color mode
#14 568.0 Warning: Data has too many channels for Default color mode
#14 568.1 Warning: Data has too many channels for Default color mode
#14 568.1 Warning: Data has too many channels for Default color mode
#14 568.1 Warning: Data has too many channels for Default color mode
#14 568.1 Warning: Data has too many channels for Default color mode
#14 568.2 Warning: Data has too many channels for Default color mode
#14 568.2 Warning: Data has too many channels for Default color mode
#14 568.2 Warning: Data has too many channels for Default color mode
#14 568.2 Warning: Data has too many channels for Default color mode
#14 568.3 Warning: Data has too many channels for Default color mode
#14 568.3 Warning: Data has too many channels for Default color mode
#14 568.3 Warning: Data has too many channels for Grayscale color mode
#14 568.3 Warning: Data has too many channels for Grayscale color mode
#14 568.3 Warning: Data has too many channels for Grayscale color mode
#14 568.4 Warning: Data has too many channels for Grayscale color mode
#14 568.4 Warning: Data has too many channels for Grayscale color mode
#14 568.4 Warning: Data has too many channels for Grayscale color mode
#14 568.4 Warning: Data has too many channels for Grayscale color mode
#14 568.5 Warning: Data has too many channels for Grayscale color mode
#14 568.5 Warning: Data has too many channels for Colorized color mode
#14 568.5 Warning: Data has too many channels for Colorized color mode
#14 568.5 Warning: Data has too many channels for Colorized color mode
#14 569.2 Warning: Data has too many channels for Default color mode
#14 569.4 [[1;34mINFO[m] [1;32mTests run: [0;1;32m30[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 5.047 s - in [1mTestSuite[m
#14 569.7 [[1;34mINFO[m]
#14 569.7 [[1;34mINFO[m] Results:
#14 569.7 [[1;34mINFO[m]
#14 569.7 [[1;34mINFO[m] [1;32mTests run: 30, Failures: 0, Errors: 0, Skipped: 0[m
#14 569.7 [[1;34mINFO[m]
#14 569.7 [[1;34mINFO[m]
#14 569.7 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:jar[m [1m(default-jar)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 569.7 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.3.0-SNAPSHOT.jar
#14 569.7 [[1;34mINFO[m]
#14 569.7 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mbio-formats_plugins[0;1m >>>[m
#14 569.7 [[1;34mINFO[m]
#14 569.7 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 569.7 [[1;34mINFO[m]
#14 569.7 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 569.7 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 569.7 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 569.7 [[1;34mINFO[m] Storing buildNumber: 04b453e5836816f838b12379cc608f2637c22927 at timestamp: 1754180272290
#14 569.7 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 569.7 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 569.7
#14 569.7 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-plugins' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 569.7 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-plugins
#14 569.7 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 569.7 [[1;34mINFO[m]
#14 569.7 [[1;34mINFO[m] [1m<<< [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m < [0;1mgenerate-sources[m @ [36mbio-formats_plugins[0;1m <<<[m
#14 569.7 [[1;34mINFO[m]
#14 569.7 [[1;34mINFO[m]
#14 569.7 [[1;34mINFO[m] [1m--- [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 569.8 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.3.0-SNAPSHOT-sources.jar
#14 569.8 [[1;34mINFO[m]
#14 569.8 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:test-jar[m [1m(default)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 569.8 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.3.0-SNAPSHOT-tests.jar
#14 569.8 [[1;34mINFO[m]
#14 569.8 [[1;34mINFO[m] [1m--- [0;32mmaven-install-plugin:2.5.2:install[m [1m(default-install)[m @ [36mbio-formats_plugins[0;1m ---[m
#14 569.8 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.3.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.3.0-SNAPSHOT/bio-formats_plugins-8.3.0-SNAPSHOT.jar
#14 569.8 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.3.0-SNAPSHOT/bio-formats_plugins-8.3.0-SNAPSHOT.pom
#14 569.8 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.3.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.3.0-SNAPSHOT/bio-formats_plugins-8.3.0-SNAPSHOT-sources.jar
#14 569.8 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/target/bio-formats_plugins-8.3.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.3.0-SNAPSHOT/bio-formats_plugins-8.3.0-SNAPSHOT-tests.jar
#14 569.8 [[1;34mINFO[m]
#14 569.8 [[1;34mINFO[m] [1m-----------------------< [0;36mome:bio-formats-tools[0;1m >------------------------[m
#14 569.8 [[1;34mINFO[m] [1mBuilding Bio-Formats command line tools 8.3.0-SNAPSHOT [18/24][m
#14 569.8 [[1;34mINFO[m] [1m--------------------------------[ jar ]---------------------------------[m
#14 569.8 [[1;34mINFO[m]
#14 569.8 [[1;34mINFO[m] [1m--- [0;32mmaven-clean-plugin:3.1.0:clean[m [1m(default-clean)[m @ [36mbio-formats-tools[0;1m ---[m
#14 569.8 [[1;34mINFO[m]
#14 569.8 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats-tools[0;1m ---[m
#14 569.8 [[1;34mINFO[m]
#14 569.8 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbio-formats-tools[0;1m ---[m
#14 569.8 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 569.8 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 569.8 [[1;34mINFO[m] Storing buildNumber: 04b453e5836816f838b12379cc608f2637c22927 at timestamp: 1754180272369
#14 569.8 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 569.8 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 569.8
#14 569.8 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 569.8 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 569.8 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 569.8 [[1;34mINFO[m]
#14 569.8 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:resources[m [1m(default-resources)[m @ [36mbio-formats-tools[0;1m ---[m
#14 569.8 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 569.8 [[1;34mINFO[m] Copying 0 resource
#14 569.8 [[1;34mINFO[m] skip non existing resourceDirectory /bio-formats-build/bioformats/components/bio-formats-tools/lib
#14 569.8 [[1;34mINFO[m] Copying 0 resource
#14 569.8 [[1;34mINFO[m] Copying 0 resource
#14 569.8 [[1;34mINFO[m]
#14 569.8 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.14.0:compile[m [1m(default-compile)[m @ [36mbio-formats-tools[0;1m ---[m
#14 569.8 [[1;34mINFO[m] Recompiling the module because of [1mchanged dependency[m.
#14 569.8 [[1;34mINFO[m] Compiling 10 source files with javac [debug release 8] to target/classes
#14 570.0 [[1;34mINFO[m]
#14 570.0 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:testResources[m [1m(default-testResources)[m @ [36mbio-formats-tools[0;1m ---[m
#14 570.0 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#14 570.0 [[1;34mINFO[m] Copying 1 resource
#14 570.0 [[1;34mINFO[m]
#14 570.0 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.14.0:testCompile[m [1m(default-testCompile)[m @ [36mbio-formats-tools[0;1m ---[m
#14 570.0 [[1;34mINFO[m] Recompiling the module because of [1mchanged dependency[m.
#14 570.0 [[1;34mINFO[m] Compiling 1 source file with javac [debug release 8] to target/test-classes
#14 570.2 [[1;34mINFO[m]
#14 570.2 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(default-test)[m @ [36mbio-formats-tools[0;1m ---[m
#14 570.2 [[1;34mINFO[m]
#14 570.2 [[1;34mINFO[m] -------------------------------------------------------
#14 570.2 [[1;34mINFO[m] T E S T S
#14 570.2 [[1;34mINFO[m] -------------------------------------------------------
#14 570.3 [[1;34mINFO[m] Running loci.formats.tools.[1mImageConverterTest[m
#14 655.0 [[1;34mINFO[m] [1;32mTests run: [0;1;32m55[m, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 84.612 s - in loci.formats.tools.[1mImageConverterTest[m
#14 655.3 [[1;34mINFO[m]
#14 655.3 [[1;34mINFO[m] Results:
#14 655.3 [[1;34mINFO[m]
#14 655.3 [[1;34mINFO[m] [1;32mTests run: 55, Failures: 0, Errors: 0, Skipped: 0[m
#14 655.3 [[1;34mINFO[m]
#14 655.3 [[1;34mINFO[m]
#14 655.3 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:jar[m [1m(default-jar)[m @ [36mbio-formats-tools[0;1m ---[m
#14 655.3 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.3.0-SNAPSHOT.jar
#14 655.3 [[1;34mINFO[m]
#14 655.3 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mbio-formats-tools[0;1m >>>[m
#14 655.3 [[1;34mINFO[m]
#14 655.3 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbio-formats-tools[0;1m ---[m
#14 655.3 [[1;34mINFO[m]
#14 655.3 [[1;34mINFO[m] [1m--- [0;32mbuildnumber-maven-plugin:1.4:create[m [1m(default)[m @ [36mbio-formats-tools[0;1m ---[m
#14 655.3 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 655.3 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 655.3 [[1;34mINFO[m] Storing buildNumber: 04b453e5836816f838b12379cc608f2637c22927 at timestamp: 1754180357885
#14 655.3 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 655.3 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 655.3
#14 655.3 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bio-formats-tools' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 655.3 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bio-formats-tools
#14 655.3 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 655.3 [[1;34mINFO[m]
#14 655.3 [[1;34mINFO[m] [1m<<< [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m < [0;1mgenerate-sources[m @ [36mbio-formats-tools[0;1m <<<[m
#14 655.3 [[1;34mINFO[m]
#14 655.3 [[1;34mINFO[m]
#14 655.3 [[1;34mINFO[m] [1m--- [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[m @ [36mbio-formats-tools[0;1m ---[m
#14 655.3 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.3.0-SNAPSHOT-sources.jar
#14 655.3 [[1;34mINFO[m]
#14 655.3 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:test-jar[m [1m(default)[m @ [36mbio-formats-tools[0;1m ---[m
#14 655.3 [[1;34mINFO[m] Building jar: /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.3.0-SNAPSHOT-tests.jar
#14 655.4 [[1;34mINFO[m]
#14 655.4 [[1;34mINFO[m] [1m--- [0;32mmaven-install-plugin:2.5.2:install[m [1m(default-install)[m @ [36mbio-formats-tools[0;1m ---[m
#14 655.4 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.3.0-SNAPSHOT.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.3.0-SNAPSHOT/bio-formats-tools-8.3.0-SNAPSHOT.jar
#14 655.4 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.3.0-SNAPSHOT/bio-formats-tools-8.3.0-SNAPSHOT.pom
#14 655.4 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.3.0-SNAPSHOT-sources.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.3.0-SNAPSHOT/bio-formats-tools-8.3.0-SNAPSHOT-sources.jar
#14 655.4 [[1;34mINFO[m] Installing /bio-formats-build/bioformats/components/bio-formats-tools/target/bio-formats-tools-8.3.0-SNAPSHOT-tests.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.3.0-SNAPSHOT/bio-formats-tools-8.3.0-SNAPSHOT-tests.jar
#14 655.4 [[1;34mINFO[m]
#14 655.4 [[1;34mINFO[m] [1m-----------------------< [0;36mome:bioformats_package[0;1m >-----------------------[m
#14 655.4 [[1;34mINFO[m] [1mBuilding bioformats_package bundle 8.3.0-SNAPSHOT [19/24][m
#14 655.4 [[1;34mINFO[m] [1m--------------------------------[ pom ]---------------------------------[m
#14 655.4 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-assembly-plugin/3.1.0/maven-assembly-plugin-3.1.0.pom
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#14 655.4 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/plugins/maven-assembly-plugin/3.1.0/maven-assembly-plugin-3.1.0.jar
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#14 655.5 [[1;34mINFO[m]
#14 655.5 [[1;34mINFO[m] [1m--- [0;32mmaven-clean-plugin:3.1.0:clean[m [1m(default-clean)[m @ [36mbioformats_package[0;1m ---[m
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#14 655.5 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 655.5 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
#14 655.5 [[1;34mINFO[m] Storing buildNumber: 04b453e5836816f838b12379cc608f2637c22927 at timestamp: 1754180358067
#14 655.5 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 655.5 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 655.5
#14 655.5 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 655.5 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
#14 655.5 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
#14 655.5 [[1;34mINFO[m]
#14 655.5 [[1;34mINFO[m] [1m>>> [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m > [0;1mgenerate-sources[m @ [36mbioformats_package[0;1m >>>[m
#14 655.5 [[1;34mINFO[m]
#14 655.5 [[1;34mINFO[m] [1m--- [0;32mmaven-enforcer-plugin:3.0.0-M2:enforce[m [1m(enforce-versions)[m @ [36mbioformats_package[0;1m ---[m
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#14 655.5 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 655.5 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
#14 655.5 [[1;34mINFO[m] Storing buildNumber: 04b453e5836816f838b12379cc608f2637c22927 at timestamp: 1754180358086
#14 655.5 [[1;33mWARNING[m] Cannot get the branch information from the git repository:
#14 655.5 Detecting the current branch failed: fatal: ref HEAD is not a symbolic ref
#14 655.5
#14 655.5 [[1;34mINFO[m] Executing: /bin/sh -c cd '/bio-formats-build/bioformats/components/bundles/bioformats_package' && 'git' 'rev-parse' '--verify' 'HEAD'
#14 655.5 [[1;34mINFO[m] Working directory: /bio-formats-build/bioformats/components/bundles/bioformats_package
#14 655.5 [[1;34mINFO[m] Storing buildScmBranch: UNKNOWN
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#14 655.5 [[1;34mINFO[m] [1m<<< [0;32mmaven-source-plugin:3.0.1:jar[m [1m(default)[0;1m < [0;1mgenerate-sources[m @ [36mbioformats_package[0;1m <<<[m
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#14 655.5 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-artifact-transfer/0.9.0/maven-artifact-transfer-0.9.0.pom
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#14 655.6 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-artifact-transfer/0.9.0/maven-artifact-transfer-0.9.0.jar
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#14 655.7 [[1;34mINFO[m] Reading assembly descriptor: assembly.xml
#14 656.0 [[1;33mWARNING[m] The following patterns were never triggered in this artifact exclusion filter:
#14 656.0 o 'gov.nih.imagej:imagej'
#14 656.0 o 'net.imagej:ij'
#14 656.0 o 'org.springframework:spring*'
#14 656.0 o 'aopalliance:aopalliance'
#14 656.0 o 'org.aspectj:aspectj*'
#14 656.0 o 'org.slf4j:slf4j-log4j12'
#14 656.0 o 'log4j:log4j'
#14 656.0 o 'org.testng:testng'
#14 656.0 o 'com.beust:jcommander'
#14 656.0 o 'org.beanshell:bsh'
#14 656.0 o 'edu.princeton.cup:java-cup'
#14 656.0 o 'org.apache.bcel:bcel'
#14 656.0 o 'regexp:regexp'
#14 656.0 o 'org.apache.ant:ant-trax'
#14 656.0 o 'edu.ucar:udunits'
#14 656.0 o 'javax.servlet:servlet-api'
#14 656.0
#14 656.0 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/felix/maven-bundle-plugin/5.1.8/maven-bundle-plugin-5.1.8.pom
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#14 656.0 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/felix/felix-parent/7/felix-parent-7.pom
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#14 656.1 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.core/6.0.0/org.osgi.core-6.0.0.pom
#14 656.1 Progress (1): 1.1 kB
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#14 656.1 Downloading from central: https://repo.maven.apache.org/maven2/biz/aQute/bnd/biz.aQute.bndlib/6.3.1/biz.aQute.bndlib-6.3.1.pom
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#14 656.1 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.dto/1.0.0/org.osgi.dto-1.0.0.pom
#14 656.1 Progress (1): 1.3 kB
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#14 656.1 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.resource/1.0.0/org.osgi.resource-1.0.0.pom
#14 656.2 Progress (1): 1.3 kB
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#14 656.2 Downloading from central: https://repo.maven.apache.org/maven2/org/osgi/org.osgi.framework/1.8.0/org.osgi.framework-1.8.0.pom
#14 656.2 Progress (1): 1.3 kB
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#14 656.2 Downloading fro
#14 656.2 [output clipped, log limit 2MiB reached]
#14 770.3 SLF4J: No SLF4J providers were found.
#14 770.3 SLF4J: Defaulting to no-operation (NOP) logger implementation
#14 770.3 SLF4J: See https://www.slf4j.org/codes.html#noProviders for further details.
#14 DONE 777.0s
#15 [11/13] WORKDIR /bio-formats-build/bioformats
#15 DONE 0.0s
#16 [12/13] RUN ant jars tools
#16 0.285 Buildfile: /bio-formats-build/bioformats/build.xml
#16 0.660 [echo] isSnapshot = true
#16 2.770
#16 2.770 copy-jars:
#16 2.770
#16 2.770 deps-formats-api:
#16 2.854 [echo] isSnapshot = true
#16 2.914
#16 2.914 install-pom:
#16 3.087 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.3.0-SNAPSHOT/pom-bio-formats-8.3.0-SNAPSHOT.pom
#16 3.157 [resolver:install] Installing ome:pom-bio-formats:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 3.161 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 3.163
#16 3.163 jar-formats-api:
#16 3.276 [echo] isSnapshot = true
#16 3.443
#16 3.443 init-title:
#16 3.443 [echo] ----------=========== formats-api ===========----------
#16 3.443
#16 3.443 init-timestamp:
#16 3.450
#16 3.450 init:
#16 3.450
#16 3.450 copy-resources:
#16 3.451 [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-api/build/classes
#16 3.463 [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 3.466
#16 3.466 compile:
#16 3.644 [resolver:resolve] Resolving artifacts
#16 3.670 [javac] Compiling 54 source files to /bio-formats-build/bioformats/components/formats-api/build/classes
#16 3.883 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 4.483 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:52: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 4.483 [javac] import loci.common.ReflectedUniverse;
#16 4.483 [javac] ^
#16 4.784 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:150: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 4.784 [javac] int currentIndex = r.getCoreIndex();
#16 4.784 [javac] ^
#16 4.784 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:151: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.784 [javac] r.setCoreIndex(coreIndex);
#16 4.784 [javac] ^
#16 4.784 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:179: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.784 [javac] r.setCoreIndex(currentIndex);
#16 4.784 [javac] ^
#16 4.885 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1442: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.885 [javac] public void setCoreIndex(int no) {
#16 4.885 [javac] ^
#16 4.885 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1436: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 4.885 [javac] public int getCoreIndex() {
#16 4.885 [javac] ^
#16 4.885 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1362: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 4.885 [javac] public int coreIndexToSeries(int index)
#16 4.885 [javac] ^
#16 4.885 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1330: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 4.885 [javac] public int seriesToCoreIndex(int series)
#16 4.885 [javac] ^
#16 4.885 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1208: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.886 [javac] public List<CoreMetadata> getCoreMetadataList() {
#16 4.886 [javac] ^
#16 4.986 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:132: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.986 [javac] if (nativeReaderInitialized) nativeReader.setCoreIndex(no);
#16 4.986 [javac] ^
#16 4.986 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:133: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 4.986 [javac] if (legacyReaderInitialized) legacyReader.setCoreIndex(no);
#16 4.986 [javac] ^
#16 4.986 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:309: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.986 [javac] core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 4.986 [javac] ^
#16 4.986 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:314: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 4.986 [javac] core = new ArrayList<CoreMetadata>(legacyReader.getCoreMetadataList());
#16 4.987 [javac] ^
#16 5.087 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 5.087 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 5.087 [javac] ^
#16 5.087 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 5.087 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 5.087 [javac] ^
#16 5.187 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:773: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 5.187 [javac] public void setCoreIndex(int no) {
#16 5.188 [javac] ^
#16 5.188 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:767: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 5.188 [javac] public int getCoreIndex() {
#16 5.188 [javac] ^
#16 5.188 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:783: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 5.188 [javac] public int coreIndexToSeries(int index) {
#16 5.188 [javac] ^
#16 5.188 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:778: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 5.188 [javac] public int seriesToCoreIndex(int series) {
#16 5.188 [javac] ^
#16 5.188 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:587: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 5.188 [javac] public List<CoreMetadata> getCoreMetadataList() {
#16 5.188 [javac] ^
#16 5.188 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:588: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 5.189 [javac] return getReader().getCoreMetadataList();
#16 5.189 [javac] ^
#16 5.189 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:768: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 5.189 [javac] return getReader().getCoreIndex();
#16 5.189 [javac] ^
#16 5.189 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:774: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 5.189 [javac] getReader().setCoreIndex(no);
#16 5.189 [javac] ^
#16 5.189 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:779: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 5.189 [javac] return getReader().seriesToCoreIndex(series);
#16 5.189 [javac] ^
#16 5.189 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:784: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 5.189 [javac] return getReader().coreIndexToSeries(index);
#16 5.189 [javac] ^
#16 5.290 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:629: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 5.290 [javac] public void setCoreIndex(int no) {
#16 5.290 [javac] ^
#16 5.290 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:624: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 5.290 [javac] public int getCoreIndex() {
#16 5.290 [javac] ^
#16 5.290 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:639: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 5.290 [javac] public int coreIndexToSeries(int index) {
#16 5.290 [javac] ^
#16 5.290 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:634: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 5.290 [javac] public int seriesToCoreIndex(int series) {
#16 5.290 [javac] ^
#16 5.291 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:537: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 5.291 [javac] public List<CoreMetadata> getCoreMetadataList() {
#16 5.291 [javac] ^
#16 5.291 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:539: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 5.291 [javac] List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 5.291 [javac] ^
#16 5.291 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:625: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 5.291 [javac] return reader.getCoreIndex();
#16 5.291 [javac] ^
#16 5.291 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:630: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 5.291 [javac] reader.setCoreIndex(no);
#16 5.291 [javac] ^
#16 5.291 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:635: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 5.291 [javac] return reader.seriesToCoreIndex(series);
#16 5.291 [javac] ^
#16 5.291 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:640: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 5.292 [javac] return reader.coreIndexToSeries(index);
#16 5.292 [javac] ^
#16 5.492 [javac] Note: Some input files use unchecked or unsafe operations.
#16 5.492 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 5.492 [javac] 36 warnings
#16 5.534
#16 5.534 formats-api.jar:
#16 5.534 [mkdir] Created dir: /bio-formats-build/bioformats/artifacts
#16 5.557 [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-api.jar
#16 5.591 [resolver:install] Using default POM (ome:formats-api:8.3.0-SNAPSHOT)
#16 5.594 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.3.0-SNAPSHOT/formats-api-8.3.0-SNAPSHOT.pom
#16 5.654 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.3.0-SNAPSHOT/formats-api-8.3.0-SNAPSHOT.jar
#16 5.655 [resolver:install] Installing ome:formats-api:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 5.658 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#16 5.658
#16 5.658 deps-turbojpeg:
#16 5.658
#16 5.658 jar-turbojpeg:
#16 5.758 [echo] isSnapshot = true
#16 5.902
#16 5.902 init-title:
#16 5.902 [echo] ----------=========== turbojpeg ===========----------
#16 5.902
#16 5.902 init-timestamp:
#16 5.903
#16 5.903 init:
#16 5.903
#16 5.903 copy-resources:
#16 5.903 [mkdir] Created dir: /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 5.904
#16 5.904 compile:
#16 5.914 [resolver:resolve] Resolving artifacts
#16 5.917 [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#16 6.120 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 6.720 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:449: warning: [deprecation] finalize() in Object has been deprecated
#16 6.720 [javac] protected void finalize() throws Throwable {
#16 6.720 [javac] ^
#16 6.720 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:455: warning: [deprecation] finalize() in Object has been deprecated
#16 6.720 [javac] super.finalize();
#16 6.720 [javac] ^
#16 6.784 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:504: warning: [deprecation] finalize() in Object has been deprecated
#16 6.784 [javac] protected void finalize() throws Throwable {
#16 6.784 [javac] ^
#16 6.784 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:510: warning: [deprecation] finalize() in Object has been deprecated
#16 6.784 [javac] super.finalize();
#16 6.784 [javac] ^
#16 6.784 [javac] 5 warnings
#16 6.784
#16 6.784 jar:
#16 6.788 [jar] Building jar: /bio-formats-build/bioformats/artifacts/turbojpeg.jar
#16 6.979 [resolver:install] Using default POM (ome:turbojpeg:8.3.0-SNAPSHOT)
#16 6.986 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.3.0-SNAPSHOT/turbojpeg-8.3.0-SNAPSHOT.pom
#16 6.988 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.3.0-SNAPSHOT/turbojpeg-8.3.0-SNAPSHOT.jar
#16 6.990 [resolver:install] Installing ome:turbojpeg:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 6.993 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#16 6.994
#16 6.994 deps-formats-bsd:
#16 6.994
#16 6.994 jar-formats-bsd:
#16 7.105 [echo] isSnapshot = true
#16 7.253
#16 7.253 init-title:
#16 7.253 [echo] ----------=========== formats-bsd ===========----------
#16 7.253
#16 7.253 init-timestamp:
#16 7.253
#16 7.253 init:
#16 7.253
#16 7.253 copy-resources:
#16 7.254 [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 7.257 [copy] Copying 1 file to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 7.258
#16 7.258 compile:
#16 7.472 [resolver:resolve] Resolving artifacts
#16 7.498 [javac] Compiling 177 source files to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#16 7.707 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 8.908 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:45: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 8.908 [javac] import loci.common.ReflectedUniverse;
#16 8.908 [javac] ^
#16 9.209 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:297: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.209 [javac] core.size() != reader.getCoreMetadataList().size())
#16 9.209 [javac] ^
#16 9.209 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:301: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.209 [javac] List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#16 9.209 [javac] ^
#16 9.309 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:581: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.309 [javac] int n = reader.getCoreMetadataList().size();
#16 9.309 [javac] ^
#16 9.309 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:602: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 9.309 [javac] reader.setCoreIndex(coreIndex);
#16 9.309 [javac] ^
#16 9.309 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:609: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.310 [javac] int n = reader.getCoreMetadataList().size();
#16 9.310 [javac] ^
#16 9.310 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:620: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.310 [javac] int n = reader.getCoreMetadataList().size();
#16 9.310 [javac] ^
#16 9.310 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:621: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#16 9.310 [javac] if (n > 1 || noStitch) return reader.seriesToCoreIndex(series);
#16 9.310 [javac] ^
#16 9.310 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:628: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.310 [javac] int n = reader.getCoreMetadataList().size();
#16 9.310 [javac] ^
#16 9.310 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:629: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#16 9.310 [javac] if (n > 1 || noStitch) return reader.coreIndexToSeries(index);
#16 9.310 [javac] ^
#16 9.310 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:637: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.310 [javac] int n = reader.getCoreMetadataList().size();
#16 9.310 [javac] ^
#16 9.310 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:638: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 9.310 [javac] if (n > 1 || noStitch) reader.setCoreIndex(no);
#16 9.310 [javac] ^
#16 9.310 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 9.310 [javac] return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 9.310 [javac] ^
#16 9.310 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 9.310 [javac] return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#16 9.310 [javac] ^
#16 9.310 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:873: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.310 [javac] return noStitch ? reader.getCoreMetadataList() : core;
#16 9.310 [javac] ^
#16 9.310 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1096: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.310 [javac] if (reader.getCoreMetadataList().size() > 1 && externals.length > 1) {
#16 9.310 [javac] ^
#16 9.310 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1121: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.310 [javac] seriesCount = reader.getCoreMetadataList().size();
#16 9.310 [javac] ^
#16 9.311 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1211: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.311 [javac] if (reader.getCoreMetadataList().size() == 1 && getSeriesCount() > 1) {
#16 9.311 [javac] ^
#16 9.311 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1229: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.311 [javac] if (reader.getCoreMetadataList().size() > 1) return 0;
#16 9.311 [javac] ^
#16 9.311 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1385: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.311 [javac] r.setCoreIndex(reader.getCoreMetadataList().size() > 1 ? sno : 0);
#16 9.311 [javac] ^
#16 9.411 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/MinMaxCalculator.java:387: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 9.411 [javac] int seriesCount = unwrap().getCoreMetadataList().size();
#16 9.411 [javac] ^
#16 9.611 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 9.611 [javac] BitWriter out = new BitWriter();
#16 9.611 [javac] ^
#16 9.611 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 9.611 [javac] BitWriter out = new BitWriter();
#16 9.611 [javac] ^
#16 9.712 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/dicom/DicomTag.java:537: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 9.712 [javac] return new Double(v);
#16 9.712 [javac] ^
#16 10.41 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2106: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 10.41 [javac] return FormatTools.getPhysicalSizeX(new Double(pixelSizeX), UNITS.MILLIMETER);
#16 10.41 [javac] ^
#16 10.41 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2113: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#16 10.41 [javac] return FormatTools.getPhysicalSizeY(new Double(pixelSizeY), UNITS.MILLIMETER);
#16 10.41 [javac] ^
#16 10.41 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2120: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 10.41 [javac] return FormatTools.getPhysicalSizeZ(new Double(pixelSizeZ), UNITS.MILLIMETER);
#16 10.41 [javac] ^
#16 10.51 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/ICSReader.java:1142: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 10.51 [javac] channelNames.put(new Integer(channelNames.size()), value);
#16 10.51 [javac] ^
#16 10.81 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/OMETiffReader.java:622: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.81 [javac] OMETiffCoreMetadata baseCore = new OMETiffCoreMetadata(reader.getCoreMetadataList().get(0));
#16 10.81 [javac] ^
#16 10.81 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/PGMReader.java:158: warning: [deprecation] StreamTokenizer(InputStream) in StreamTokenizer has been deprecated
#16 10.81 [javac] StreamTokenizer st = new StreamTokenizer(in);
#16 10.81 [javac] ^
#16 10.91 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/SlideBook7Reader.java:3095: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 10.91 [javac] store.setPlaneExposureTime(new Time(new Double(expTime), UNITS.MILLISECOND), capture, imageIndex);
#16 10.91 [javac] ^
#16 10.91 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffDelegateReader.java:95: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 10.91 [javac] core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#16 10.91 [javac] ^
#16 10.91 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:74: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 10.91 [javac] protected ReflectedUniverse r;
#16 10.91 [javac] ^
#16 10.91 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:103: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 10.91 [javac] r = new ReflectedUniverse();
#16 10.91 [javac] ^
#16 11.01 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1043: warning: [deprecation] NM in UNITS has been deprecated
#16 11.01 [javac] wavelength.value = new float[] {wave == null ? 1f : wave.value(UNITS.NM).floatValue()};
#16 11.01 [javac] ^
#16 11.01 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1075: warning: [deprecation] MM in UNITS has been deprecated
#16 11.01 [javac] sliceThickness.value = padString(String.valueOf(physicalZ.value(UNITS.MM)));
#16 11.01 [javac] ^
#16 11.01 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1088: warning: [deprecation] MM in UNITS has been deprecated
#16 11.01 [javac] String px = physicalX == null ? "1" : String.valueOf(physicalX.value(UNITS.MM));
#16 11.01 [javac] ^
#16 11.01 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1089: warning: [deprecation] MM in UNITS has been deprecated
#16 11.01 [javac] String py = physicalY == null ? "1" : String.valueOf(physicalY.value(UNITS.MM));
#16 11.01 [javac] ^
#16 11.01 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1108: warning: [deprecation] MM in UNITS has been deprecated
#16 11.01 [javac] volumeWidth.value = new float[] {physicalX == null ? 1f : physicalX.value(UNITS.MM).floatValue() * width};
#16 11.01 [javac] ^
#16 11.01 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1112: warning: [deprecation] MM in UNITS has been deprecated
#16 11.01 [javac] volumeHeight.value = new float[] {physicalY == null ? 1f : physicalY.value(UNITS.MM).floatValue() * height};
#16 11.01 [javac] ^
#16 11.01 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1118: warning: [deprecation] MM in UNITS has been deprecated
#16 11.01 [javac] volumeDepth.value = new float[] {physicalZ == null ? 1f : physicalZ.value(UNITS.MM).floatValue() * sizeZ};
#16 11.01 [javac] ^
#16 11.01 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1166: warning: [deprecation] MM in UNITS has been deprecated
#16 11.01 [javac] offsetX.value = padString(physicalX == null ? "0" : padString(String.valueOf(physicalX.value(UNITS.MM).floatValue() * width)));
#16 11.01 [javac] ^
#16 11.01 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1170: warning: [deprecation] MM in UNITS has been deprecated
#16 11.01 [javac] offsetY.value = padString(physicalY == null ? "0" : padString(String.valueOf(physicalY.value(UNITS.MM).floatValue() * height)));
#16 11.01 [javac] ^
#16 11.12 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:223: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 11.12 [javac] ifd.put(new Integer(IFD.TILE_WIDTH), new Long(getTileSizeX()));
#16 11.12 [javac] ^
#16 11.12 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:223: warning: [removal] Long(long) in Long has been deprecated and marked for removal
#16 11.12 [javac] ifd.put(new Integer(IFD.TILE_WIDTH), new Long(getTileSizeX()));
#16 11.12 [javac] ^
#16 11.12 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:224: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#16 11.12 [javac] ifd.put(new Integer(IFD.TILE_LENGTH), new Long(getTileSizeY()));
#16 11.12 [javac] ^
#16 11.12 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:224: warning: [removal] Long(long) in Long has been deprecated and marked for removal
#16 11.12 [javac] ifd.put(new Integer(IFD.TILE_LENGTH), new Long(getTileSizeY()));
#16 11.12 [javac] ^
#16 11.22 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/services/JPEGTurboServiceImpl.java:110: warning: [deprecation] loadNativeLibrary(Class<?>,String) in NativeLibraryUtil has been deprecated
#16 11.22 [javac] libraryLoaded = NativeLibraryUtil.loadNativeLibrary(TJ.class, "turbojpeg");
#16 11.22 [javac] ^
#16 11.22 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:320: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 11.22 [javac] doubleResult[i] = new Double(result.get(i).doubleValue());
#16 11.22 [javac] ^
#16 11.22 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:342: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#16 11.22 [javac] result[i] = new Double(readNumber().doubleValue());
#16 11.22 [javac] ^
#16 11.22 [javac] Note: Some input files use unchecked or unsafe operations.
#16 11.22 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 11.22 [javac] 51 warnings
#16 11.24
#16 11.24 formats-bsd.jar:
#16 11.25 [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-bsd.jar
#16 11.38 [resolver:install] Using default POM (ome:formats-bsd:8.3.0-SNAPSHOT)
#16 11.38 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.3.0-SNAPSHOT/formats-bsd-8.3.0-SNAPSHOT.pom
#16 11.38 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.3.0-SNAPSHOT/formats-bsd-8.3.0-SNAPSHOT.jar
#16 11.38 [resolver:install] Installing ome:formats-bsd:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 11.39 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#16 11.39
#16 11.39 deps-formats-gpl:
#16 11.39
#16 11.39 jar-formats-gpl:
#16 11.49 [echo] isSnapshot = true
#16 11.64
#16 11.64 init-title:
#16 11.64 [echo] ----------=========== formats-gpl ===========----------
#16 11.64
#16 11.64 init-timestamp:
#16 11.64
#16 11.64 init:
#16 11.64
#16 11.64 copy-resources:
#16 11.64 [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 11.64 [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 11.64
#16 11.64 compile:
#16 12.03 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom
#16 12.38 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom
#16 12.77 [resolver:resolve] Downloaded https://maven.scijava.org/content/groups/public/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.pom (0 B at 0.0 KB/sec)
#16 12.78 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom
#16 12.89 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom
#16 13.00 [resolver:resolve] Downloaded https://maven.scijava.org/content/groups/public/edu/ucar/netcdf-java-platform/5.6.0/netcdf-java-platform-5.6.0.pom (0 B at 0.0 KB/sec)
#16 13.02 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom
#16 13.14 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom
#16 13.26 [resolver:resolve] Downloaded https://maven.scijava.org/content/groups/public/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.pom (0 B at 0.0 KB/sec)
#16 13.30 [resolver:resolve] Resolving artifacts
#16 13.31 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#16 13.31 [resolver:resolve] Downloading https://repo1.maven.org/maven2/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
#16 13.47 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar
#16 13.47 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar
#16 13.83 [resolver:resolve] Downloaded https://maven.scijava.org/content/groups/public/edu/ucar/cdm-core/5.6.0/cdm-core-5.6.0.jar (0 B at 0.0 KB/sec)
#16 13.83 [resolver:resolve] Downloaded https://maven.scijava.org/content/groups/public/edu/ucar/httpservices/5.6.0/httpservices-5.6.0.jar (0 B at 0.0 KB/sec)
#16 13.85 [javac] Compiling 177 source files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#16 14.05 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 15.36 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:50: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 15.36 [javac] import loci.formats.codec.BitWriter;
#16 15.36 [javac] ^
#16 15.36 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:43: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 15.36 [javac] import loci.formats.codec.BitWriter;
#16 15.36 [javac] ^
#16 17.46 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/LeicaReader.java:1321: warning: non-varargs call of varargs method with inexact argument type for last parameter;
#16 17.46 [javac] LOGGER.trace("Parsing tokens: {}", tokens);
#16 17.46 [javac] ^
#16 17.46 [javac] cast to Object for a varargs call
#16 17.46 [javac] cast to Object[] for a non-varargs call and to suppress this warning
#16 17.56 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1269: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 17.56 [javac] BitWriter bits = null;
#16 17.56 [javac] ^
#16 17.56 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1271: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 17.56 [javac] bits = new BitWriter(planes[index].length / 8);
#16 17.56 [javac] ^
#16 17.86 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/OlympusTileReader.java:196: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#16 17.86 [javac] CoreMetadata ms = new CoreMetadata(helperReader.getCoreMetadataList().get(0));
#16 17.86 [javac] ^
#16 18.26 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 18.26 [javac] BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 18.26 [javac] ^
#16 18.26 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#16 18.26 [javac] BitWriter bits = new BitWriter(roiPixels.length / 8);
#16 18.26 [javac] ^
#16 18.55 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:170: warning: [deprecation] findVariable(String) in Group has been deprecated
#16 18.55 [javac] Variable variable = group.findVariable(variableName);
#16 18.55 [javac] ^
#16 18.55 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:197: warning: [deprecation] findVariable(String) in Group has been deprecated
#16 18.55 [javac] Variable variable = group.findVariable(variableName);
#16 18.55 [javac] ^
#16 18.55 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:200: warning: [deprecation] getAttributes() in Variable has been deprecated
#16 18.55 [javac] List<Attribute> attributes = variable.getAttributes();
#16 18.55 [javac] ^
#16 18.55 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:238: warning: [deprecation] getName() in CDMNode has been deprecated
#16 18.55 [javac] String groupName = group.getName();
#16 18.55 [javac] ^
#16 18.55 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:239: warning: [deprecation] getAttributes() in Group has been deprecated
#16 18.55 [javac] List<Attribute> attributes = group.getAttributes();
#16 18.55 [javac] ^
#16 18.55 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:247: warning: [deprecation] getName() in CDMNode has been deprecated
#16 18.55 [javac] String variableName = variable.getName();
#16 18.55 [javac] ^
#16 18.55 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:270: warning: [deprecation] findGroup(String) in Group has been deprecated
#16 18.55 [javac] Group nextParent = parent.findGroup(token);
#16 18.55 [javac] ^
#16 18.55 [javac] Note: Some input files use unchecked or unsafe operations.
#16 18.55 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 18.55 [javac] 16 warnings
#16 18.55
#16 18.55 formats-gpl.jar:
#16 18.56 [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-gpl.jar
#16 18.71 [resolver:install] Using default POM (ome:formats-gpl:8.3.0-SNAPSHOT)
#16 18.71 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.3.0-SNAPSHOT/formats-gpl-8.3.0-SNAPSHOT.pom
#16 18.72 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.3.0-SNAPSHOT/formats-gpl-8.3.0-SNAPSHOT.jar
#16 18.72 [resolver:install] Installing ome:formats-gpl:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 18.72 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#16 18.72
#16 18.72 deps-bio-formats-plugins:
#16 18.72
#16 18.72 jar-bio-formats-plugins:
#16 18.82 [echo] isSnapshot = true
#16 18.97
#16 18.97 init-title:
#16 18.97 [echo] ----------=========== bio-formats_plugins ===========----------
#16 18.97
#16 18.97 init-timestamp:
#16 18.97
#16 18.97 init:
#16 18.97
#16 18.97 copy-resources:
#16 18.97 [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 18.97 [copy] Copying 3 files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 18.97
#16 18.97 compile:
#16 19.22 [resolver:resolve] Resolving artifacts
#16 19.24 [javac] Compiling 70 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#16 19.45 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 20.25 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:39: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.25 [javac] import loci.common.ReflectedUniverse;
#16 20.25 [javac] ^
#16 20.25 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:40: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.25 [javac] import loci.common.ReflectedUniverse;
#16 20.25 [javac] ^
#16 20.65 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/Updater.java:51: warning: [deprecation] STABLE_VERSION in UpgradeChecker has been deprecated
#16 20.65 [javac] "Stable build (" + UpgradeChecker.STABLE_VERSION + ")";
#16 20.65 [javac] ^
#16 20.85 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.85 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 20.85 [javac] ^
#16 20.85 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.85 [javac] ReflectedUniverse r = new ReflectedUniverse();
#16 20.85 [javac] ^
#16 20.95 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.95 [javac] ReflectedUniverse ru = new ReflectedUniverse();
#16 20.95 [javac] ^
#16 20.95 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:168: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#16 20.95 [javac] ReflectedUniverse ru = new ReflectedUniverse();
#16 20.95 [javac] ^
#16 21.35 [javac] Note: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#16 21.35 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 21.35 [javac] 8 warnings
#16 21.38
#16 21.38 bio-formats-plugins.jar:
#16 21.38 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar
#16 21.42 [resolver:install] Using default POM (ome:bio-formats_plugins:8.3.0-SNAPSHOT)
#16 21.42 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.3.0-SNAPSHOT/bio-formats_plugins-8.3.0-SNAPSHOT.pom
#16 21.42 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.3.0-SNAPSHOT/bio-formats_plugins-8.3.0-SNAPSHOT.jar
#16 21.42 [resolver:install] Installing ome:bio-formats_plugins:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 21.42 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#16 21.43
#16 21.43 deps-bio-formats-tools:
#16 21.43
#16 21.43 jar-bio-formats-tools:
#16 21.53 [echo] isSnapshot = true
#16 21.66
#16 21.66 init-title:
#16 21.66 [echo] ----------=========== bio-formats-tools ===========----------
#16 21.66
#16 21.66 init-timestamp:
#16 21.66
#16 21.66 init:
#16 21.66
#16 21.66 copy-resources:
#16 21.67 [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 21.67
#16 21.67 compile:
#16 21.89 [resolver:resolve] Resolving artifacts
#16 21.90 [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#16 22.11 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 23.21 [javac] 1 warning
#16 23.21
#16 23.21 bio-formats-tools.jar:
#16 23.21 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar
#16 23.22 [resolver:install] Using default POM (ome:bio-formats-tools:8.3.0-SNAPSHOT)
#16 23.22 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.3.0-SNAPSHOT/bio-formats-tools-8.3.0-SNAPSHOT.pom
#16 23.22 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.3.0-SNAPSHOT/bio-formats-tools-8.3.0-SNAPSHOT.jar
#16 23.22 [resolver:install] Installing ome:bio-formats-tools:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 23.23 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 23.23
#16 23.23 deps-tests:
#16 23.23
#16 23.23 jar-tests:
#16 23.32 [echo] isSnapshot = true
#16 23.45
#16 23.45 init-title:
#16 23.45 [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 23.45
#16 23.45 init-timestamp:
#16 23.45
#16 23.45 init:
#16 23.45
#16 23.45 copy-resources:
#16 23.45 [mkdir] Created dir: /bio-formats-build/bioformats/components/test-suite/build/classes
#16 23.45
#16 23.45 compile:
#16 23.77 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 23.84 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 24.31 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 24.33 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/repository/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 24.74 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#16 25.18 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom (0 B at 0.0 KB/sec)
#16 25.20 [resolver:resolve] Resolving artifacts
#16 25.21 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 25.25 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 25.61 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 25.62 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/repository/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 26.02 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#16 26.38 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar (0 B at 0.0 KB/sec)
#16 26.39 [javac] Compiling 23 source files to /bio-formats-build/bioformats/components/test-suite/build/classes
#16 26.59 [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
#16 27.70 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:676: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 27.70 [javac] int index = unflattenedReader.getCoreIndex();
#16 27.70 [javac] ^
#16 27.70 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:677: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#16 27.70 [javac] reader.setCoreIndex(index);
#16 27.70 [javac] ^
#16 27.90 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2341: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 27.90 [javac] config.setSeries(resolutionReader.getCoreIndex());
#16 27.90 [javac] ^
#16 27.90 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2507: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#16 27.90 [javac] config.setSeries(resolutionReader.getCoreIndex());
#16 27.90 [javac] ^
#16 28.20 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:52: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 28.20 [javac] FormatReaderTest i1 = (FormatReaderTest) m1.getInstances()[0];
#16 28.20 [javac] ^
#16 28.20 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:53: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#16 28.20 [javac] FormatReaderTest i2 = (FormatReaderTest) m2.getInstances()[0];
#16 28.20 [javac] ^
#16 28.20 [javac] Note: Some input files use unchecked or unsafe operations.
#16 28.20 [javac] Note: Recompile with -Xlint:unchecked for details.
#16 28.20 [javac] 7 warnings
#16 28.20
#16 28.20 tests.jar:
#16 28.21 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar
#16 28.22 [resolver:install] Using default POM (ome:test-suite:8.3.0-SNAPSHOT)
#16 28.23 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.3.0-SNAPSHOT/test-suite-8.3.0-SNAPSHOT.pom
#16 28.23 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.3.0-SNAPSHOT/test-suite-8.3.0-SNAPSHOT.jar
#16 28.23 [resolver:install] Installing ome:test-suite:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 28.23 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 28.23
#16 28.23 jars:
#16 28.23
#16 28.23 copy-jars:
#16 28.23
#16 28.23 deps-formats-api:
#16 28.28 [echo] isSnapshot = true
#16 28.32
#16 28.32 install-pom:
#16 28.45 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.3.0-SNAPSHOT/pom-bio-formats-8.3.0-SNAPSHOT.pom
#16 28.45 [resolver:install] Installing ome:pom-bio-formats:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 28.45 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#16 28.45
#16 28.45 jar-formats-api:
#16 28.54 [echo] isSnapshot = true
#16 28.69
#16 28.69 init-title:
#16 28.69 [echo] ----------=========== formats-api ===========----------
#16 28.69
#16 28.69 init-timestamp:
#16 28.69
#16 28.69 init:
#16 28.69
#16 28.69 copy-resources:
#16 28.69
#16 28.69 compile:
#16 28.84 [resolver:resolve] Resolving artifacts
#16 28.85
#16 28.85 formats-api.jar:
#16 28.87 [resolver:install] Using default POM (ome:formats-api:8.3.0-SNAPSHOT)
#16 28.87 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.3.0-SNAPSHOT/formats-api-8.3.0-SNAPSHOT.pom
#16 28.88 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.3.0-SNAPSHOT/formats-api-8.3.0-SNAPSHOT.jar
#16 28.88 [resolver:install] Installing ome:formats-api:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 28.88 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
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#16 28.88 deps-turbojpeg:
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#16 29.09 [echo] ----------=========== turbojpeg ===========----------
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#16 29.10 [resolver:install] Using default POM (ome:turbojpeg:8.3.0-SNAPSHOT)
#16 29.11 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.3.0-SNAPSHOT/turbojpeg-8.3.0-SNAPSHOT.pom
#16 29.11 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.3.0-SNAPSHOT/turbojpeg-8.3.0-SNAPSHOT.jar
#16 29.11 [resolver:install] Installing ome:turbojpeg:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 29.12 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
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#16 29.32 [echo] ----------=========== formats-bsd ===========----------
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#16 29.57 [resolver:install] Using default POM (ome:formats-bsd:8.3.0-SNAPSHOT)
#16 29.57 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.3.0-SNAPSHOT/formats-bsd-8.3.0-SNAPSHOT.pom
#16 29.57 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.3.0-SNAPSHOT/formats-bsd-8.3.0-SNAPSHOT.jar
#16 29.58 [resolver:install] Installing ome:formats-bsd:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 29.58 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
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#16 30.06 [resolver:install] Using default POM (ome:formats-gpl:8.3.0-SNAPSHOT)
#16 30.06 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.3.0-SNAPSHOT/formats-gpl-8.3.0-SNAPSHOT.pom
#16 30.07 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.3.0-SNAPSHOT/formats-gpl-8.3.0-SNAPSHOT.jar
#16 30.07 [resolver:install] Installing ome:formats-gpl:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 30.07 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
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#16 30.07 deps-bio-formats-plugins:
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#16 30.28 [echo] ----------=========== bio-formats_plugins ===========----------
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#16 30.54 [resolver:install] Using default POM (ome:bio-formats_plugins:8.3.0-SNAPSHOT)
#16 30.54 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.3.0-SNAPSHOT/bio-formats_plugins-8.3.0-SNAPSHOT.pom
#16 30.55 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.3.0-SNAPSHOT/bio-formats_plugins-8.3.0-SNAPSHOT.jar
#16 30.55 [resolver:install] Installing ome:bio-formats_plugins:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 30.55 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
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#16 30.55 deps-bio-formats-tools:
#16 30.55
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#16 30.81
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#16 30.81 [echo] ----------=========== bio-formats-tools ===========----------
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#16 31.05 [resolver:install] Using default POM (ome:bio-formats-tools:8.3.0-SNAPSHOT)
#16 31.05 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.3.0-SNAPSHOT/bio-formats-tools-8.3.0-SNAPSHOT.pom
#16 31.05 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.3.0-SNAPSHOT/bio-formats-tools-8.3.0-SNAPSHOT.jar
#16 31.05 [resolver:install] Installing ome:bio-formats-tools:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 31.05 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#16 31.06
#16 31.06 deps-tests:
#16 31.06
#16 31.06 jar-tests:
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#16 31.26
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#16 31.26 [echo] ----------=========== bio-formats-testing-framework ===========----------
#16 31.26
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#16 31.26
#16 31.26 compile:
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#16 31.51 tests.jar:
#16 31.51 [resolver:install] Using default POM (ome:test-suite:8.3.0-SNAPSHOT)
#16 31.52 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.3.0-SNAPSHOT/test-suite-8.3.0-SNAPSHOT.pom
#16 31.52 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.3.0-SNAPSHOT/test-suite-8.3.0-SNAPSHOT.jar
#16 31.52 [resolver:install] Installing ome:test-suite:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 31.52 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#16 31.52
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#16 31.52
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#16 31.52 [echo] ----------=========== bioformats_package ===========----------
#16 31.62 [echo] isSnapshot = true
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#16 31.98 [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats_plugins/8.3.0-SNAPSHOT/bio-formats_plugins-8.3.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.01 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-common/6.1.1-SNAPSHOT/ome-common-6.1.1-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.04 [unzip] Expanding: /home/build/.m2/repository/io/minio/minio/5.0.2/minio-5.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.06 [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client-xml/1.20.0/google-http-client-xml-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 32.07 [unzip] Expanding: /home/build/.m2/repository/com/google/http-client/google-http-client/1.20.0/google-http-client-1.20.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 32.22 [unzip] Expanding: /home/build/.m2/repository/com/squareup/okio/okio/1.12.0/okio-1.12.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 32.50 [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-core/2.14.2/jackson-core-2.14.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#16 36.49 [unzip] Expanding: /home/build/.m2/repository/com/google/re2j/re2j/1.3/re2j-1.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.50 [unzip] Expanding: /home/build/.m2/repository/commons-math/commons-math/1.2/commons-math-1.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.57 [unzip] Expanding: /home/build/.m2/repository/io/airlift/aircompressor/0.27/aircompressor-0.27.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 36.60 [unzip] Expanding: /home/build/.m2/repository/org/xerial/sqlite-jdbc/3.49.1.0/sqlite-jdbc-3.49.1.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 37.03 [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-forms/1.7.2/jgoodies-forms-1.7.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 37.05 [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-common/1.7.0/jgoodies-common-1.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 37.06 [unzip] Expanding: /home/build/.m2/repository/org/slf4j/slf4j-api/2.0.9/slf4j-api-2.0.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 37.07 [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats-tools/8.3.0-SNAPSHOT/bio-formats-tools-8.3.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 37.08 [unzip] Expanding: /home/build/.m2/repository/xalan/serializer/2.7.3/serializer-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 37.11 [unzip] Expanding: /home/build/.m2/repository/xalan/xalan/2.7.3/xalan-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 37.55 [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-core/1.3.15/logback-core-1.3.15.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 37.67 [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-classic/1.3.15/logback-classic-1.3.15.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 38.22 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bioformats_package.jar
#16 45.38 [delete] Deleting directory /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#16 46.24 [resolver:install] Using default POM (ome:bioformats_package:8.3.0-SNAPSHOT)
#16 46.25 [resolver:install] Installing /bio-formats-build/bioformats/components/bundles/bioformats_package/pom.xml to /home/build/.m2/repository/ome/bioformats_package/8.3.0-SNAPSHOT/bioformats_package-8.3.0-SNAPSHOT.pom
#16 46.25 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bioformats_package.jar to /home/build/.m2/repository/ome/bioformats_package/8.3.0-SNAPSHOT/bioformats_package-8.3.0-SNAPSHOT.jar
#16 46.30 [resolver:install] Installing ome:bioformats_package:8.3.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/8.3.0-SNAPSHOT/maven-metadata-local.xml
#16 46.30 [resolver:install] Installing ome:bioformats_package/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/maven-metadata-local.xml
#16 46.30
#16 46.30 BUILD SUCCESSFUL
#16 46.30 Total time: 46 seconds
#16 DONE 46.9s
#17 [13/13] WORKDIR /bio-formats-build/bioformats/components/test-suite
#17 DONE 0.0s
#18 exporting to image
#18 exporting layers
#18 exporting layers 4.1s done
#18 writing image sha256:c1e7cecd042af135870d0073561e28bc2b59a6bbc6fdc0c93ed3844e0fc0065d done
#18 naming to docker.io/snoopycrimecop/bioformats:merge_ci done
#18 DONE 4.1s
[33m1 warning found (use docker --debug to expand):
[0m - LegacyKeyValueFormat: "ENV key=value" should be used instead of legacy "ENV key value" format (line 30)
Finished: SUCCESS
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