![[Jenkins]](/jenkins/static/0cb5541d/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 454 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 155f8de84051621b91200b6b3617c057b622fad4 (refs/remotes/origin/master) Commit message: "Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 155f8de84051621b91200b6b3617c057b622fad4 # timeout=10 > git rev-list --no-walk 155f8de84051621b91200b6b3617c057b622fad4 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 > git submodule update --init --recursive omero-marshal # timeout=10 > git submodule update --init --recursive omero-dropbox # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 410 [Pipeline] sh + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-python-superbuild-push + python3.11 -m venv build/venv > git submodule update --init --recursive omero-scripts # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-25.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-25.1 WARNING: There was an error checking the latest version of pip. + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.6.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.10-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.13.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.18-py2.py3-none-any.whl.metadata (5.7 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-44.0.2-cp39-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.12 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting pycparser (from cffi>=1.12->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (35 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2025.4.26-py3-none-any.whl.metadata (2.5 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.17.2-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached PyGithub-2.6.1-py3-none-any.whl (410 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached cryptography-44.0.2-cp39-abi3-manylinux_2_34_x86_64.whl (4.2 MB) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (467 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (762 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (143 kB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached certifi-2025.4.26-py3-none-any.whl (159 kB) Using cached typing_extensions-4.13.2-py3-none-any.whl (45 kB) Using cached Deprecated-1.2.18-py2.py3-none-any.whl (10.0 kB) Using cached wrapt-1.17.2-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (83 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Using cached ruamel.yaml-0.18.10-py3-none-any.whl (117 kB) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (739 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.18 PyGithub-2.6.1 PyYAML-6.0.2 certifi-2025.4.26 cffi-1.17.1 charset-normalizer-3.4.1 cryptography-44.0.2 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.10 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.13.2 urllib3-1.26.20 wrapt-1.17.2 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-04-28 00:40:12,588 [ scc.config] DEBUG Found github.token 2025-04-28 00:40:12,590 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:12,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-28 00:40:13,038 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:13,201 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-28 00:40:13,453 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:13,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-04-28 00:40:13,607 [ scc.gh] DEBUG 4430 remaining from 5000 (Reset at 00:04 2025-04-28 00:40:13,607 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-04-28 00:40:13,609 [ scc.git] DEBUG Check current status 2025-04-28 00:40:13,610 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-28 00:40:13,612 [ scc.git] DEBUG 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4 2025-04-28 00:40:13,612 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-28 00:40:13,653 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-04-28 00:40:13,657 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-04-28 00:40:13,666 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49) 2025-04-28 00:40:13,671 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-04-28 00:40:13,675 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-04-28 00:40:13,678 [ scc.config] DEBUG Found remote.origin.url 2025-04-28 00:40:13,858 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:14,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-04-28 00:40:14,376 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:14,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-04-28 00:40:14,862 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:15,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-04-28 00:40:15,282 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:15,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-04-28 00:40:15,726 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:15,893 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-04-28 00:40:15,894 [ scc.git] DEBUG Resetting... 2025-04-28 00:40:15,894 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-04-28 00:40:15,899 [ scc.git] DEBUG HEAD is now at 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4 2025-04-28 00:40:15,899 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-04-28 00:40:15,952 [ scc.git] DEBUG Check current status 2025-04-28 00:40:15,952 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-28 00:40:15,954 [ scc.git] DEBUG 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4 2025-04-28 00:40:15,954 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-28 00:40:15,995 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-04-28 00:40:15,998 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-04-28 00:40:16,007 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49) 2025-04-28 00:40:16,011 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-04-28 00:40:16,015 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-04-28 00:40:16,016 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-04-28 00:40:16,016 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-04-28 00:40:16,016 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-04-28 00:40:16,016 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-04-28 00:40:16,016 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-04-28 00:40:16,016 [ scc.repo] DEBUG ## PRs found: 2025-04-28 00:40:16,144 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:16,342 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2025-04-28 00:40:16,342 [ scc.repo] DEBUG ## Branches found: 2025-04-28 00:40:16,342 [ scc.git] DEBUG Get sha1 of %s 2025-04-28 00:40:16,343 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:40:16,345 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-04-28 00:40:16,347 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-04-28 00:40:16,347 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-04-28 00:40:16,350 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-04-28 00:40:16,352 [ scc.git] DEBUG Already up to date. 2025-04-28 00:40:16,352 [ scc.git] DEBUG ## Unique users: [] 2025-04-28 00:40:16,352 [ scc.git] DEBUG Get sha1 of %s 2025-04-28 00:40:16,352 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:40:16,354 [ scc.git] DEBUG Calling 'git submodule update' 2025-04-28 00:40:16,394 [ scc.git] DEBUG Get sha1 of %s 2025-04-28 00:40:16,394 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:40:16,396 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-04-28 00:40:16,430 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa2a750bbd0> has no local changes 2025-04-28 00:40:16,431 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Generated by OMERO-python-superbuild-push#390 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/390/)' 2025-04-28 00:40:16,456 [ scc.git] DEBUG [detached HEAD 169e573] merge master -Dorg -Snone 2025-04-28 00:40:16,456 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-04-28 00:40:16,456 [ scc.merge] INFO Already up to date. 2025-04-28 00:40:16,456 [ scc.merge] INFO 2025-04-28 00:40:16,456 [ scc.merge] INFO 2025-04-28 00:40:16,457 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-04-28 00:40:16,457 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-04-28 00:40:18,415 [ scc.config] DEBUG Found github.token 2025-04-28 00:40:18,416 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:18,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-28 00:40:18,825 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:18,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-28 00:40:19,233 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:19,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-04-28 00:40:19,391 [ scc.gh] DEBUG 4422 remaining from 5000 (Reset at 00:04 2025-04-28 00:40:19,391 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-04-28 00:40:19,394 [ scc.git] DEBUG Check current status 2025-04-28 00:40:19,394 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-28 00:40:19,396 [ scc.git] DEBUG 169e573 merge master -Dorg -Snone 2025-04-28 00:40:19,397 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-28 00:40:19,437 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-04-28 00:40:19,440 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-04-28 00:40:19,449 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49) 2025-04-28 00:40:19,453 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-04-28 00:40:19,457 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-04-28 00:40:19,460 [ scc.config] DEBUG Found remote.origin.url 2025-04-28 00:40:19,460 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-04-28 00:40:19,461 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-04-28 00:40:19,642 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:19,905 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-04-28 00:40:20,156 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:20,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-04-28 00:40:20,688 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:20,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-04-28 00:40:21,112 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:21,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-04-28 00:40:21,538 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:21,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-04-28 00:40:21,726 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-28 00:40:21,774 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-04-28 00:40:21,774 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-04-28 00:40:21,776 [ scc.git] DEBUG Check current status 2025-04-28 00:40:21,776 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-28 00:40:21,778 [ scc.git] DEBUG 01fa0c5 Merge pull request #24 from jburel/build 2025-04-28 00:40:21,779 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-28 00:40:21,817 [ scc.config] DEBUG Found remote.origin.url 2025-04-28 00:40:21,977 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:22,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2025-04-28 00:40:22,499 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:22,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-04-28 00:40:22,964 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:23,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-04-28 00:40:23,381 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:23,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-04-28 00:40:23,831 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:24,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-04-28 00:40:24,036 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-28 00:40:24,074 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-28 00:40:24,074 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-04-28 00:40:24,074 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-04-28 00:40:24,076 [ scc.git] DEBUG Check current status 2025-04-28 00:40:24,076 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-28 00:40:24,079 [ scc.git] DEBUG 6d44f66 Merge pull request #82 from jburel/build 2025-04-28 00:40:24,079 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-28 00:40:24,117 [ scc.config] DEBUG Found remote.origin.url 2025-04-28 00:40:24,287 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:24,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2025-04-28 00:40:24,792 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:25,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-04-28 00:40:25,267 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:25,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-04-28 00:40:25,707 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:25,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-04-28 00:40:26,135 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:26,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-04-28 00:40:26,311 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-28 00:40:26,350 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-28 00:40:26,351 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-04-28 00:40:26,351 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-04-28 00:40:26,353 [ scc.git] DEBUG Check current status 2025-04-28 00:40:26,353 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-28 00:40:26,356 [ scc.git] DEBUG e485be49 Merge pull request #427 from Rdornier/mirror-java-download 2025-04-28 00:40:26,356 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-28 00:40:26,394 [ scc.config] DEBUG Found remote.origin.url 2025-04-28 00:40:26,562 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:26,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2025-04-28 00:40:27,094 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:27,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-04-28 00:40:27,543 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:27,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-04-28 00:40:28,002 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:28,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-04-28 00:40:28,435 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:28,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-04-28 00:40:28,616 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-28 00:40:28,653 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-28 00:40:28,653 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-04-28 00:40:28,654 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-04-28 00:40:28,656 [ scc.git] DEBUG Check current status 2025-04-28 00:40:28,656 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-28 00:40:28,658 [ scc.git] DEBUG 950b28b Merge pull request #225 from will-moore/test_fixes 2025-04-28 00:40:28,658 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-28 00:40:28,696 [ scc.config] DEBUG Found remote.origin.url 2025-04-28 00:40:28,697 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-04-28 00:40:28,867 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:29,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2025-04-28 00:40:29,367 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:29,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-04-28 00:40:29,827 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:30,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-04-28 00:40:30,270 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:30,524 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-04-28 00:40:30,776 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:30,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-04-28 00:40:30,956 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-28 00:40:30,996 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-28 00:40:30,996 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-04-28 00:40:30,996 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-04-28 00:40:30,998 [ scc.git] DEBUG Check current status 2025-04-28 00:40:30,998 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-28 00:40:31,002 [ scc.git] DEBUG 4b979f847 Bump version: 5.29.0 → 5.29.1.dev0 2025-04-28 00:40:31,002 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-28 00:40:31,041 [ scc.config] DEBUG Found remote.origin.url 2025-04-28 00:40:31,206 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:31,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2025-04-28 00:40:31,709 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:31,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-04-28 00:40:32,190 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:32,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-04-28 00:40:32,617 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:32,795 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-04-28 00:40:33,047 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:33,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-04-28 00:40:33,240 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-28 00:40:33,279 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-28 00:40:33,279 [ scc.git] DEBUG Resetting... 2025-04-28 00:40:33,279 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-04-28 00:40:33,284 [ scc.git] DEBUG HEAD is now at 169e573 merge master -Dorg -Snone 2025-04-28 00:40:33,284 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-04-28 00:40:33,337 [ scc.git] DEBUG Check current status 2025-04-28 00:40:33,337 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-28 00:40:33,339 [ scc.git] DEBUG 169e573 merge master -Dorg -Snone 2025-04-28 00:40:33,339 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-28 00:40:33,379 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-04-28 00:40:33,382 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-04-28 00:40:33,391 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49) 2025-04-28 00:40:33,395 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-04-28 00:40:33,399 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-04-28 00:40:33,400 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-04-28 00:40:33,400 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-04-28 00:40:33,400 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-04-28 00:40:33,400 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-04-28 00:40:33,400 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-04-28 00:40:33,400 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-04-28 00:40:33,400 [ scc.repo] DEBUG ## PRs found: 2025-04-28 00:40:33,491 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:33,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2025-04-28 00:40:33,696 [ scc.repo] DEBUG ## Branches found: 2025-04-28 00:40:33,696 [ scc.git] DEBUG Get sha1 of %s 2025-04-28 00:40:33,696 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:40:33,698 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-04-28 00:40:33,701 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-04-28 00:40:33,701 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-04-28 00:40:33,703 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-04-28 00:40:33,706 [ scc.git] DEBUG Already up to date. 2025-04-28 00:40:33,706 [ scc.git] DEBUG ## Unique users: [] 2025-04-28 00:40:33,706 [ scc.git] DEBUG Get sha1 of %s 2025-04-28 00:40:33,706 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:40:33,708 [ scc.git] DEBUG Calling 'git submodule update' 2025-04-28 00:40:33,749 [ scc.git] DEBUG Get sha1 of %s 2025-04-28 00:40:33,749 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:40:33,751 [ scc.repo] DEBUG ## PRs found: 2025-04-28 00:40:33,947 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:34,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2025-04-28 00:40:34,469 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:34,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2025-04-28 00:40:34,958 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:35,238 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2025-04-28 00:40:35,490 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:35,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-04-28 00:40:36,025 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:36,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-28 00:40:36,491 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:36,766 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-04-28 00:40:37,017 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:37,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2025-04-28 00:40:37,211 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-04-28 00:40:37,211 [ scc.repo] DEBUG ## Branches found: 2025-04-28 00:40:37,212 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-04-28 00:40:37,212 [ scc.git] DEBUG Get sha1 of %s 2025-04-28 00:40:37,212 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:40:37,214 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-04-28 00:40:37,217 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-04-28 00:40:37,217 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-04-28 00:40:37,220 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-04-28 00:40:37,223 [ scc.git] DEBUG Already up to date. 2025-04-28 00:40:37,223 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2025-04-28 00:40:37,497 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2025-04-28 00:40:37,497 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2025-04-28 00:40:37,501 [ scc.git] DEBUG ## Unique users: [] 2025-04-28 00:40:37,501 [ scc.git] DEBUG Get sha1 of %s 2025-04-28 00:40:37,501 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:40:37,503 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-04-28 00:40:37,507 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:40:37,509 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-04-28 00:40:37,522 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2025-04-28 00:40:37,522 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2025-04-28 00:40:37,522 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2025-04-28 00:40:37,522 [ scc.git] DEBUG Auto-merging src/fsLists.py 2025-04-28 00:40:37,522 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2025-04-28 00:40:37,522 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2025-04-28 00:40:37,522 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2025-04-28 00:40:37,522 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2025-04-28 00:40:37,522 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2025-04-28 00:40:37,524 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-28 00:40:37,528 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2025-04-28 00:40:37,528 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2025-04-28 00:40:37,528 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2025-04-28 00:40:37,528 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2025-04-28 00:40:37,528 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2025-04-28 00:40:37,528 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2025-04-28 00:40:37,528 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2025-04-28 00:40:37,528 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2025-04-28 00:40:37,529 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2025-04-28 00:40:37,529 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:37,529 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2025-04-28 00:40:37,693 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-28 00:40:37,694 [ scc.git] DEBUG Calling 'git submodule update' 2025-04-28 00:40:37,732 [ scc.git] DEBUG Get sha1 of %s 2025-04-28 00:40:37,732 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:40:37,734 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-28 00:40:37,772 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-04-28 00:40:37,776 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3038db0bd0> has no local changes 2025-04-28 00:40:37,776 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Generated by OMERO-python-superbuild-push#390 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/390/)' 2025-04-28 00:40:37,783 [ scc.git] DEBUG [detached HEAD 227847a] merge master -Dorg -Ssuccess-only 2025-04-28 00:40:37,784 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-28 00:40:37,784 [ scc.repo] DEBUG ## PRs found: 2025-04-28 00:40:37,945 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:38,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2025-04-28 00:40:38,562 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:38,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None 2025-04-28 00:40:39,037 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:39,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None 2025-04-28 00:40:39,487 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:39,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2025-04-28 00:40:39,975 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:40,161 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2025-04-28 00:40:40,413 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:40,711 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-04-28 00:40:40,963 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:41,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-28 00:40:41,420 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:41,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-04-28 00:40:41,873 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:42,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2025-04-28 00:40:42,065 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2025-04-28 00:40:42,316 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:42,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2025-04-28 00:40:42,879 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:43,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2025-04-28 00:40:43,379 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:43,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2025-04-28 00:40:43,871 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:44,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2025-04-28 00:40:44,066 [ scc.repo] DEBUG ## Branches found: 2025-04-28 00:40:44,066 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-04-28 00:40:44,066 [ scc.git] DEBUG Get sha1 of %s 2025-04-28 00:40:44,067 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:40:44,069 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-04-28 00:40:44,072 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-04-28 00:40:44,072 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-04-28 00:40:44,075 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-04-28 00:40:44,078 [ scc.git] DEBUG Already up to date. 2025-04-28 00:40:44,078 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2025-04-28 00:40:44,356 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2025-04-28 00:40:44,356 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2025-04-28 00:40:44,361 [ scc.git] DEBUG ## Unique users: [] 2025-04-28 00:40:44,361 [ scc.git] DEBUG Get sha1 of %s 2025-04-28 00:40:44,361 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:40:44,363 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-04-28 00:40:44,367 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:40:44,369 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-04-28 00:40:44,378 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2025-04-28 00:40:44,379 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-28 00:40:44,383 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2025-04-28 00:40:44,383 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2025-04-28 00:40:44,383 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2025-04-28 00:40:44,384 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:44,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-28 00:40:44,546 [ scc.git] DEBUG Calling 'git submodule update' 2025-04-28 00:40:44,585 [ scc.git] DEBUG Get sha1 of %s 2025-04-28 00:40:44,585 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:40:44,587 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-28 00:40:44,625 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-04-28 00:40:44,629 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f30380b5210> has no local changes 2025-04-28 00:40:44,630 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Generated by OMERO-python-superbuild-push#390 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/390/)' 2025-04-28 00:40:44,637 [ scc.git] DEBUG [detached HEAD 301ab5d] merge master -Dorg -Ssuccess-only 2025-04-28 00:40:44,637 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-28 00:40:44,637 [ scc.repo] DEBUG ## PRs found: 2025-04-28 00:40:44,797 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:45,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2025-04-28 00:40:45,385 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:45,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/453 HTTP/1.1" 200 None 2025-04-28 00:40:45,852 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:46,147 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/453/comments HTTP/1.1" 200 None 2025-04-28 00:40:46,399 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:46,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab HTTP/1.1" 200 None 2025-04-28 00:40:46,932 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:47,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-28 00:40:47,420 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:47,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-28 00:40:47,905 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:48,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab HTTP/1.1" 200 None 2025-04-28 00:40:48,423 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:48,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/ff9ad445b6af7725ab17a39185630b8919e42bab?per_page=1 HTTP/1.1" 200 None 2025-04-28 00:40:48,859 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:49,069 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab HTTP/1.1" 200 None 2025-04-28 00:40:49,320 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:49,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab/status HTTP/1.1" 200 None 2025-04-28 00:40:49,561 [ scc.repo] DEBUG - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' 2025-04-28 00:40:49,812 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:50,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450 HTTP/1.1" 200 None 2025-04-28 00:40:50,294 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:50,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443 HTTP/1.1" 200 None 2025-04-28 00:40:50,759 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:51,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443/comments HTTP/1.1" 200 None 2025-04-28 00:40:51,072 [ scc.repo] DEBUG # ... Exclude label: exclude 2025-04-28 00:40:51,322 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:51,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None 2025-04-28 00:40:51,838 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:52,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None 2025-04-28 00:40:52,304 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:52,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-04-28 00:40:52,826 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:53,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-28 00:40:53,325 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:53,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-28 00:40:53,795 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:54,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-04-28 00:40:54,329 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:54,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None 2025-04-28 00:40:54,752 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:54,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-04-28 00:40:55,234 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:55,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None 2025-04-28 00:40:55,423 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method' 2025-04-28 00:40:55,674 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:55,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2025-04-28 00:40:56,142 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:56,350 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2025-04-28 00:40:56,601 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:56,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2025-04-28 00:40:57,127 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:57,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-28 00:40:57,623 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:57,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-28 00:40:58,128 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:58,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2025-04-28 00:40:58,633 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:58,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None 2025-04-28 00:40:59,099 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:59,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-04-28 00:40:59,610 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:40:59,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-28 00:41:00,065 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:00,335 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-04-28 00:41:00,587 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:00,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2 2025-04-28 00:41:00,782 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2025-04-28 00:41:01,033 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:01,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2025-04-28 00:41:01,518 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:01,774 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2025-04-28 00:41:02,025 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:02,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-04-28 00:41:02,535 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:02,761 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-28 00:41:03,012 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:03,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-04-28 00:41:03,477 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:03,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 2 2025-04-28 00:41:03,667 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2025-04-28 00:41:03,917 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:04,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2025-04-28 00:41:04,395 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:04,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2025-04-28 00:41:04,891 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:05,140 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2025-04-28 00:41:05,391 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:05,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2025-04-28 00:41:05,923 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:06,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-04-28 00:41:06,462 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:06,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-28 00:41:06,935 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:07,228 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-04-28 00:41:07,479 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:07,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2025-04-28 00:41:07,671 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2025-04-28 00:41:07,672 [ scc.repo] DEBUG ## Branches found: 2025-04-28 00:41:07,672 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-04-28 00:41:07,672 [ scc.git] DEBUG Get sha1 of %s 2025-04-28 00:41:07,672 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:41:07,675 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-04-28 00:41:07,677 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-04-28 00:41:07,677 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-04-28 00:41:07,680 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-04-28 00:41:07,684 [ scc.git] DEBUG Already up to date. 2025-04-28 00:41:07,684 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2025-04-28 00:41:07,978 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-04-28 00:41:07,978 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2025-04-28 00:41:07,983 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2025-04-28 00:41:08,268 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-04-28 00:41:08,268 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2025-04-28 00:41:08,272 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2025-04-28 00:41:08,560 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-04-28 00:41:08,560 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2025-04-28 00:41:08,564 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2025-04-28 00:41:08,828 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-04-28 00:41:08,828 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2025-04-28 00:41:08,832 [ scc.git] DEBUG Calling 'git fetch origin pull/453/head' 2025-04-28 00:41:09,091 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-04-28 00:41:09,091 [ scc.git] DEBUG * branch refs/pull/453/head -> FETCH_HEAD 2025-04-28 00:41:09,095 [ scc.git] DEBUG ## Unique users: [] 2025-04-28 00:41:09,095 [ scc.git] DEBUG Get sha1 of %s 2025-04-28 00:41:09,095 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:41:09,098 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-04-28 00:41:09,110 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:41:09,112 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-04-28 00:41:09,134 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2025-04-28 00:41:09,134 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2025-04-28 00:41:09,136 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-28 00:41:09,140 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2025-04-28 00:41:09,140 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2025-04-28 00:41:09,140 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2025-04-28 00:41:09,141 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:09,337 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-28 00:41:09,338 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-04-28 00:41:09,351 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:41:09,353 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-04-28 00:41:09,374 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-28 00:41:09,377 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2025-04-28 00:41:09,377 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2025-04-28 00:41:09,378 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2025-04-28 00:41:09,378 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2025-04-28 00:41:09,378 [ scc.git] DEBUG create mode 100644 connect.py 2025-04-28 00:41:09,589 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:09,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-28 00:41:09,760 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2025-04-28 00:41:09,773 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:41:09,775 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2025-04-28 00:41:09,797 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2025-04-28 00:41:09,799 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-28 00:41:09,804 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2025-04-28 00:41:09,804 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2025-04-28 00:41:10,011 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:10,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-28 00:41:10,176 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-04-28 00:41:10,189 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:41:10,191 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-04-28 00:41:10,225 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-04-28 00:41:10,226 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-28 00:41:10,232 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------ 2025-04-28 00:41:10,233 [ scc.git] DEBUG 1 file changed, 36 deletions(-) 2025-04-28 00:41:10,427 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:10,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-28 00:41:10,603 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ff9ad445b6af7725ab17a39185630b8919e42bab' 2025-04-28 00:41:10,616 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:41:10,618 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 453 (getObject() and getExternalInfo() load externalInfo) ff9ad445b6af7725ab17a39185630b8919e42bab' 2025-04-28 00:41:10,654 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-04-28 00:41:10,656 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-28 00:41:10,663 [ scc.git] DEBUG src/omero/gateway/__init__.py | 21 ++++++++++++++++++ 2025-04-28 00:41:10,663 [ scc.git] DEBUG src/omero/plugins/obj.py | 50 ++++++++++++++++++++++++++++++++++++++++++- 2025-04-28 00:41:10,663 [ scc.git] DEBUG 2 files changed, 70 insertions(+), 1 deletion(-) 2025-04-28 00:41:10,854 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:11,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-28 00:41:11,020 [ scc.git] DEBUG Calling 'git submodule update' 2025-04-28 00:41:11,059 [ scc.git] DEBUG Get sha1 of %s 2025-04-28 00:41:11,059 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:41:11,061 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-28 00:41:11,098 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-04-28 00:41:11,104 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3038d2ba50> has no local changes 2025-04-28 00:41:11,105 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' Generated by OMERO-python-superbuild-push#390 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/390/)' 2025-04-28 00:41:11,111 [ scc.git] DEBUG [detached HEAD 0e27b606] merge master -Dorg -Ssuccess-only 2025-04-28 00:41:11,112 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-28 00:41:11,112 [ scc.git] INFO Overriding base-branch from master to develop 2025-04-28 00:41:11,112 [ scc.repo] DEBUG ## PRs found: 2025-04-28 00:41:11,271 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:11,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-04-28 00:41:11,798 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:12,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-04-28 00:41:12,275 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:12,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-04-28 00:41:12,751 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:13,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-04-28 00:41:13,301 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:13,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-28 00:41:13,808 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:14,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-28 00:41:14,286 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:17,624 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-04-28 00:41:17,876 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:18,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-04-28 00:41:18,079 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-04-28 00:41:18,330 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:18,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-04-28 00:41:18,831 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:19,067 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-04-28 00:41:19,319 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:19,625 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-04-28 00:41:19,877 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:20,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-28 00:41:20,337 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:20,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-04-28 00:41:20,830 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:21,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-04-28 00:41:21,006 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-04-28 00:41:21,257 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:21,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-04-28 00:41:21,741 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:22,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-04-28 00:41:22,279 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:22,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-04-28 00:41:22,783 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:23,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-04-28 00:41:23,087 [ scc.repo] DEBUG ## Branches found: 2025-04-28 00:41:23,087 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-04-28 00:41:23,087 [ scc.git] DEBUG Get sha1 of %s 2025-04-28 00:41:23,087 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:41:23,090 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-04-28 00:41:23,092 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-04-28 00:41:23,092 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-04-28 00:41:23,095 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-04-28 00:41:23,098 [ scc.git] DEBUG Already up to date. 2025-04-28 00:41:23,098 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-04-28 00:41:23,389 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-04-28 00:41:23,389 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-04-28 00:41:23,394 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-04-28 00:41:23,678 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-04-28 00:41:23,679 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-04-28 00:41:23,683 [ scc.git] DEBUG ## Unique users: [] 2025-04-28 00:41:23,683 [ scc.git] DEBUG Get sha1 of %s 2025-04-28 00:41:23,683 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:41:23,685 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-04-28 00:41:23,691 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:41:23,693 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-04-28 00:41:23,704 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-04-28 00:41:23,704 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-04-28 00:41:23,704 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-04-28 00:41:23,707 [ scc.git] DEBUG Calling 'git reset --hard 950b28b31e228ae7b317cbd159235faf4023e4dc' 2025-04-28 00:41:23,711 [ scc.git] DEBUG HEAD is now at 950b28b Merge pull request #225 from will-moore/test_fixes 2025-04-28 00:41:23,712 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:23,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-28 00:41:23,883 [ scc.git] DEBUG Calling 'git merge-base 950b28b31e228ae7b317cbd159235faf4023e4dc 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-04-28 00:41:23,888 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..950b28b31e228ae7b317cbd159235faf4023e4dc' 2025-04-28 00:41:23,892 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#390](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/390/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/390/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-04-28 00:41:23,894 [ scc.config] DEBUG Found github.token 2025-04-28 00:41:23,894 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-04-28 00:41:23,894 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-04-28 00:41:23,899 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:41:23,901 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-04-28 00:41:23,911 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-28 00:41:23,914 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-04-28 00:41:23,914 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-04-28 00:41:24,134 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:24,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-28 00:41:24,297 [ scc.git] DEBUG Calling 'git submodule update' 2025-04-28 00:41:24,335 [ scc.git] DEBUG Get sha1 of %s 2025-04-28 00:41:24,335 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:41:24,337 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-28 00:41:24,375 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-04-28 00:41:24,378 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3037dc9b90> has no local changes 2025-04-28 00:41:24,379 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#390 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/390/)' 2025-04-28 00:41:24,385 [ scc.git] DEBUG [detached HEAD 3cfe5ad] merge master -Dorg -Ssuccess-only 2025-04-28 00:41:24,385 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-28 00:41:24,385 [ scc.repo] DEBUG ## PRs found: 2025-04-28 00:41:24,548 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:24,959 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2025-04-28 00:41:25,224 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:25,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/617 HTTP/1.1" 200 None 2025-04-28 00:41:25,728 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:25,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/616 HTTP/1.1" 200 None 2025-04-28 00:41:26,205 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:26,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None 2025-04-28 00:41:26,744 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:26,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-28 00:41:27,245 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:27,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-28 00:41:27,729 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:28,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None 2025-04-28 00:41:28,278 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:28,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/c6401a8d78f907d300ef6a6bb673efa86374ecc4?per_page=1 HTTP/1.1" 200 None 2025-04-28 00:41:28,798 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:29,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None 2025-04-28 00:41:29,254 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:29,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/status HTTP/1.1" 200 None 2025-04-28 00:41:29,527 [ scc.repo] DEBUG - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-04-28 00:41:29,778 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:30,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/614 HTTP/1.1" 200 None 2025-04-28 00:41:30,255 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:30,474 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/614/comments HTTP/1.1" 200 None 2025-04-28 00:41:30,726 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:31,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-04-28 00:41:31,254 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:31,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-28 00:41:31,864 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:32,150 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-28 00:41:32,401 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:32,636 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-04-28 00:41:32,888 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:33,074 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/da14d11b161eb8aa90a6e4729758ea504d5914e3?per_page=1 HTTP/1.1" 200 None 2025-04-28 00:41:33,325 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:33,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-04-28 00:41:33,762 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:33,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/status HTTP/1.1" 200 None 2025-04-28 00:41:33,944 [ scc.repo] DEBUG - PR 614 sbesson 'CodeQL workflow updates' 2025-04-28 00:41:34,195 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:34,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613 HTTP/1.1" 200 None 2025-04-28 00:41:34,678 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:34,951 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613/comments HTTP/1.1" 200 None 2025-04-28 00:41:35,203 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:35,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d HTTP/1.1" 200 None 2025-04-28 00:41:35,732 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:35,971 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-28 00:41:36,222 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:36,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-28 00:41:36,726 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:36,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d HTTP/1.1" 200 None 2025-04-28 00:41:37,238 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:37,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/a8c190ba1c823672143ab90d77020d652e2c084d?per_page=1 HTTP/1.1" 200 None 2025-04-28 00:41:37,669 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:37,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d HTTP/1.1" 200 None 2025-04-28 00:41:38,129 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:38,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d/status HTTP/1.1" 200 None 2025-04-28 00:41:38,391 [ scc.repo] DEBUG - PR 613 will-moore 'externalInfo display' 2025-04-28 00:41:38,642 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:38,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612 HTTP/1.1" 200 None 2025-04-28 00:41:39,151 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:39,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612/comments HTTP/1.1" 200 None 2025-04-28 00:41:39,612 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:39,869 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-04-28 00:41:40,121 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:40,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-28 00:41:40,635 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:40,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-28 00:41:41,137 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:41,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-04-28 00:41:41,651 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:41,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06446bf912b361c22e46c5a0678b3146b91e7e26?per_page=1 HTTP/1.1" 200 None 2025-04-28 00:41:42,113 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:42,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-04-28 00:41:42,579 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:42,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/status HTTP/1.1" 200 None 2025-04-28 00:41:42,765 [ scc.repo] DEBUG - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-04-28 00:41:43,016 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:43,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/606 HTTP/1.1" 200 None 2025-04-28 00:41:43,516 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:43,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022 HTTP/1.1" 200 None 2025-04-28 00:41:44,026 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:44,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-28 00:41:44,505 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:44,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-28 00:41:44,994 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:45,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022 HTTP/1.1" 200 None 2025-04-28 00:41:45,453 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:45,641 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/b360c3125f9471bf4001447f35c732507c2f2022?per_page=1 HTTP/1.1" 200 None 2025-04-28 00:41:45,893 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:46,075 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022 HTTP/1.1" 200 None 2025-04-28 00:41:46,326 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:46,518 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022/status HTTP/1.1" 200 None 2025-04-28 00:41:46,519 [ scc.repo] DEBUG - PR 606 knabar 'Fix issues related to images with very high channel count' 2025-04-28 00:41:46,770 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:46,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None 2025-04-28 00:41:47,249 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:47,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None 2025-04-28 00:41:47,748 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:47,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-04-28 00:41:48,241 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:48,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-28 00:41:48,777 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:49,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-28 00:41:49,297 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:49,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-04-28 00:41:49,834 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:50,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None 2025-04-28 00:41:50,284 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:50,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-04-28 00:41:50,855 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:51,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None 2025-04-28 00:41:51,050 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf' 2025-04-28 00:41:51,301 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:51,533 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None 2025-04-28 00:41:51,785 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:52,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-04-28 00:41:52,311 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:52,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-28 00:41:52,823 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:53,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-28 00:41:53,324 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:53,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-04-28 00:41:53,845 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:54,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 None 2025-04-28 00:41:54,323 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:54,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-04-28 00:41:54,818 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:55,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/status HTTP/1.1" 200 None 2025-04-28 00:41:55,019 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations' 2025-04-28 00:41:55,270 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:55,506 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596 HTTP/1.1" 200 None 2025-04-28 00:41:55,757 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:55,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596/comments HTTP/1.1" 200 None 2025-04-28 00:41:56,223 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:56,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-04-28 00:41:56,737 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:56,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-28 00:41:57,236 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:57,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-28 00:41:57,720 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:58,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-04-28 00:41:58,301 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:58,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/3aae48f586d7b412538a45b34ddc471a26a286e8?per_page=1 HTTP/1.1" 200 None 2025-04-28 00:41:58,730 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:58,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-04-28 00:41:59,172 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:59,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/status HTTP/1.1" 200 None 2025-04-28 00:41:59,364 [ scc.repo] DEBUG - PR 596 sukunis 'Linkify can parse anchor tag' 2025-04-28 00:41:59,615 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:41:59,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595 HTTP/1.1" 200 None 2025-04-28 00:42:00,106 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:00,308 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595/comments HTTP/1.1" 200 None 2025-04-28 00:42:00,560 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:00,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-04-28 00:42:01,072 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:01,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-28 00:42:01,560 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:01,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-28 00:42:02,130 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:02,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-04-28 00:42:02,650 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:02,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/30278b64bb39134a3f1101b600d4a82256e6eaeb?per_page=1 HTTP/1.1" 200 None 2025-04-28 00:42:03,098 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:03,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-04-28 00:42:03,554 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:03,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/status HTTP/1.1" 200 None 2025-04-28 00:42:03,768 [ scc.repo] DEBUG - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-04-28 00:42:04,019 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:04,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2025-04-28 00:42:04,507 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:04,773 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None 2025-04-28 00:42:05,024 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:05,253 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2025-04-28 00:42:05,504 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:05,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2025-04-28 00:42:06,018 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:06,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-04-28 00:42:06,539 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:06,794 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-28 00:42:07,045 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:07,319 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-04-28 00:42:07,570 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:07,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 2 2025-04-28 00:42:07,758 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-04-28 00:42:08,009 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:08,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2025-04-28 00:42:08,480 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:08,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2025-04-28 00:42:08,982 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:09,251 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-04-28 00:42:09,503 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:09,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-28 00:42:09,969 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:10,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-04-28 00:42:10,516 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:10,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 2 2025-04-28 00:42:10,715 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2025-04-28 00:42:10,966 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:11,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2025-04-28 00:42:11,473 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:11,734 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2025-04-28 00:42:11,985 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:12,249 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2025-04-28 00:42:12,500 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:12,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-28 00:42:13,020 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:13,406 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-28 00:42:13,407 [ scc.repo] DEBUG ## Branches found: 2025-04-28 00:42:13,408 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-04-28 00:42:13,408 [ scc.git] DEBUG Get sha1 of %s 2025-04-28 00:42:13,408 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:42:13,411 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-04-28 00:42:13,414 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-04-28 00:42:13,414 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-04-28 00:42:13,417 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-04-28 00:42:13,420 [ scc.git] DEBUG Already up to date. 2025-04-28 00:42:13,421 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2025-04-28 00:42:13,740 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-28 00:42:13,741 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2025-04-28 00:42:13,744 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2025-04-28 00:42:14,034 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-28 00:42:14,034 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2025-04-28 00:42:14,039 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2025-04-28 00:42:14,299 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-28 00:42:14,299 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2025-04-28 00:42:14,303 [ scc.git] DEBUG Calling 'git fetch origin pull/596/head' 2025-04-28 00:42:14,582 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-28 00:42:14,582 [ scc.git] DEBUG * branch refs/pull/596/head -> FETCH_HEAD 2025-04-28 00:42:14,587 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head' 2025-04-28 00:42:14,845 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-28 00:42:14,845 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD 2025-04-28 00:42:14,849 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head' 2025-04-28 00:42:15,106 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-28 00:42:15,106 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD 2025-04-28 00:42:15,110 [ scc.git] DEBUG Calling 'git fetch origin pull/606/head' 2025-04-28 00:42:15,372 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-28 00:42:15,372 [ scc.git] DEBUG * branch refs/pull/606/head -> FETCH_HEAD 2025-04-28 00:42:15,376 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head' 2025-04-28 00:42:15,646 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-28 00:42:15,646 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD 2025-04-28 00:42:15,650 [ scc.git] DEBUG Calling 'git fetch origin pull/613/head' 2025-04-28 00:42:15,904 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-28 00:42:15,904 [ scc.git] DEBUG * branch refs/pull/613/head -> FETCH_HEAD 2025-04-28 00:42:15,908 [ scc.git] DEBUG Calling 'git fetch origin pull/614/head' 2025-04-28 00:42:16,224 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-28 00:42:16,224 [ scc.git] DEBUG * branch refs/pull/614/head -> FETCH_HEAD 2025-04-28 00:42:16,228 [ scc.git] DEBUG Calling 'git fetch origin pull/616/head' 2025-04-28 00:42:16,486 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-28 00:42:16,486 [ scc.git] DEBUG * branch refs/pull/616/head -> FETCH_HEAD 2025-04-28 00:42:16,490 [ scc.git] DEBUG ## Unique users: [] 2025-04-28 00:42:16,490 [ scc.git] DEBUG Get sha1 of %s 2025-04-28 00:42:16,490 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:42:16,492 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-04-28 00:42:16,500 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:42:16,502 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-04-28 00:42:16,521 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-04-28 00:42:16,521 [ scc.git] DEBUG Auto-merging setup.py 2025-04-28 00:42:16,523 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-28 00:42:16,526 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2025-04-28 00:42:16,526 [ scc.git] DEBUG setup.py | 1 + 2025-04-28 00:42:16,526 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2025-04-28 00:42:16,528 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:16,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-28 00:42:16,687 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-04-28 00:42:16,694 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:42:16,696 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-04-28 00:42:16,718 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2025-04-28 00:42:16,718 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2025-04-28 00:42:16,720 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-28 00:42:16,724 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2025-04-28 00:42:16,724 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2025-04-28 00:42:16,724 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2025-04-28 00:42:16,937 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:17,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-28 00:42:17,106 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-04-28 00:42:17,114 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:42:17,116 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (linkify supports urls that include {}[] characters) 30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-04-28 00:42:17,135 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-28 00:42:17,139 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +- 2025-04-28 00:42:17,139 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-04-28 00:42:17,357 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:17,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-28 00:42:17,535 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-04-28 00:42:17,543 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:42:17,545 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Linkify can parse anchor tag) 3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-04-28 00:42:17,567 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-28 00:42:17,571 [ scc.git] DEBUG .../webclient/javascript/ome.webclient.actions.js | 26 ++++++++++++++++++++-- 2025-04-28 00:42:17,571 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2025-04-28 00:42:17,786 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:17,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-28 00:42:17,969 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539' 2025-04-28 00:42:17,977 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:42:17,979 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539' 2025-04-28 00:42:18,000 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-28 00:42:18,005 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 - 2025-04-28 00:42:18,006 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++-- 2025-04-28 00:42:18,006 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++- 2025-04-28 00:42:18,006 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +- 2025-04-28 00:42:18,006 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++- 2025-04-28 00:42:18,006 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++-- 2025-04-28 00:42:18,006 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++-- 2025-04-28 00:42:18,006 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++----- 2025-04-28 00:42:18,006 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 + 2025-04-28 00:42:18,006 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +- 2025-04-28 00:42:18,006 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++-- 2025-04-28 00:42:18,006 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-) 2025-04-28 00:42:18,220 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:18,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-28 00:42:18,390 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-04-28 00:42:18,398 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:42:18,400 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-04-28 00:42:18,425 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py 2025-04-28 00:42:18,426 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-28 00:42:18,433 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------ 2025-04-28 00:42:18,433 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +--- 2025-04-28 00:42:18,433 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 ----------------- 2025-04-28 00:42:18,433 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-) 2025-04-28 00:42:18,640 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:18,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-28 00:42:18,811 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b360c3125f9471bf4001447f35c732507c2f2022' 2025-04-28 00:42:18,819 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:42:18,821 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 606 (Fix issues related to images with very high channel count) b360c3125f9471bf4001447f35c732507c2f2022' 2025-04-28 00:42:18,842 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-28 00:42:18,846 [ scc.git] DEBUG .../webgateway/static/webgateway/js/ome.viewport.js | 17 +++++++++++++++-- 2025-04-28 00:42:18,846 [ scc.git] DEBUG 1 file changed, 15 insertions(+), 2 deletions(-) 2025-04-28 00:42:19,061 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:19,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-28 00:42:19,235 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-04-28 00:42:19,244 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:42:19,246 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Allow top_links to wrap if too many for space) 06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-04-28 00:42:19,268 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-28 00:42:19,272 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.body.css | 2 ++ 2025-04-28 00:42:19,272 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.header.css | 21 +++++++++++---------- 2025-04-28 00:42:19,272 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 10 deletions(-) 2025-04-28 00:42:19,486 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:19,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-28 00:42:19,667 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a8c190ba1c823672143ab90d77020d652e2c084d' 2025-04-28 00:42:19,676 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:42:19,678 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 613 (externalInfo display) a8c190ba1c823672143ab90d77020d652e2c084d' 2025-04-28 00:42:19,700 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-28 00:42:19,704 [ scc.git] DEBUG .../webclient/annotations/includes/toolbar.html | 42 ++++++++++++++++------ 2025-04-28 00:42:19,704 [ scc.git] DEBUG .../webclient/annotations/metadata_general.html | 38 ++++++++++++++------ 2025-04-28 00:42:19,704 [ scc.git] DEBUG 2 files changed, 60 insertions(+), 20 deletions(-) 2025-04-28 00:42:19,918 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:20,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-28 00:42:20,091 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...da14d11b161eb8aa90a6e4729758ea504d5914e3' 2025-04-28 00:42:20,100 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:42:20,102 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 614 (CodeQL workflow updates) da14d11b161eb8aa90a6e4729758ea504d5914e3' 2025-04-28 00:42:20,122 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-28 00:42:20,125 [ scc.git] DEBUG .github/workflows/codeql-analysis.yml | 55 +++++++---------------------------- 2025-04-28 00:42:20,125 [ scc.git] DEBUG 1 file changed, 11 insertions(+), 44 deletions(-) 2025-04-28 00:42:20,342 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:20,503 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-28 00:42:20,504 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c6401a8d78f907d300ef6a6bb673efa86374ecc4' 2025-04-28 00:42:20,513 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:42:20,515 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 616 (Use the release/v1 branch for the PyPA action publishing to PyPI) c6401a8d78f907d300ef6a6bb673efa86374ecc4' 2025-04-28 00:42:20,534 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-28 00:42:20,537 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-04-28 00:42:20,537 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-04-28 00:42:20,755 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:20,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-28 00:42:20,911 [ scc.git] DEBUG Calling 'git submodule update' 2025-04-28 00:42:20,950 [ scc.git] DEBUG Get sha1 of %s 2025-04-28 00:42:20,950 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-28 00:42:20,952 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-28 00:42:20,991 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-04-28 00:42:20,999 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3038333910> has no local changes 2025-04-28 00:42:20,999 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 606 knabar 'Fix issues related to images with very high channel count' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 614 sbesson 'CodeQL workflow updates' - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-python-superbuild-push#390 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/390/)' 2025-04-28 00:42:21,009 [ scc.git] DEBUG [detached HEAD 1ed24fa8c] merge master -Dorg -Ssuccess-only 2025-04-28 00:42:21,009 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-28 00:42:21,009 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-28 00:42:21,056 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2025-04-28 00:42:21,162 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:21,331 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-28 00:42:21,338 [ scc.config] DEBUG Found submodule.omero-marshal.url 2025-04-28 00:42:21,583 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:21,770 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-28 00:42:21,776 [ scc.config] DEBUG Found submodule.omero-py.url 2025-04-28 00:42:22,021 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:22,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-28 00:42:22,181 [ scc.config] DEBUG Found submodule.omero-scripts.url 2025-04-28 00:42:22,425 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:22,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-28 00:42:22,596 [ scc.config] DEBUG Found submodule.omero-web.url 2025-04-28 00:42:22,841 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-28 00:42:23,002 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-28 00:42:23,007 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-04-28 00:42:23,035 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f3037e1a4d0> has local changes 2025-04-28 00:42:23,036 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Repository: ome/omero-py Excluded PRs: - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 606 knabar 'Fix issues related to images with very high channel count' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 614 sbesson 'CodeQL workflow updates' - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-python-superbuild-push#390 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/390/)' 2025-04-28 00:42:23,044 [ scc.git] DEBUG [detached HEAD 5d9d6eb] merge master -Dorg -Ssuccess-only 2025-04-28 00:42:23,044 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2025-04-28 00:42:23,044 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-04-28 00:42:23,044 [ scc.merge] INFO Already up to date. 2025-04-28 00:42:23,044 [ scc.merge] INFO 2025-04-28 00:42:23,044 [ scc.merge] INFO 2025-04-28 00:42:23,044 [ scc.merge] INFO Repository: ome/omero-dropbox 2025-04-28 00:42:23,044 [ scc.merge] INFO Already up to date. 2025-04-28 00:42:23,044 [ scc.merge] INFO 2025-04-28 00:42:23,044 [ scc.merge] INFO Merged PRs: 2025-04-28 00:42:23,044 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-04-28 00:42:23,044 [ scc.merge] INFO 2025-04-28 00:42:23,044 [ scc.merge] INFO Repository: ome/omero-marshal 2025-04-28 00:42:23,044 [ scc.merge] INFO Excluded PRs: 2025-04-28 00:42:23,044 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) 2025-04-28 00:42:23,044 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2025-04-28 00:42:23,044 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2025-04-28 00:42:23,044 [ scc.merge] INFO Already up to date. 2025-04-28 00:42:23,045 [ scc.merge] INFO 2025-04-28 00:42:23,045 [ scc.merge] INFO Merged PRs: 2025-04-28 00:42:23,045 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2025-04-28 00:42:23,045 [ scc.merge] INFO 2025-04-28 00:42:23,045 [ scc.merge] INFO Repository: ome/omero-py 2025-04-28 00:42:23,045 [ scc.merge] INFO Excluded PRs: 2025-04-28 00:42:23,045 [ scc.merge] INFO - PR 450 multimeric 'Add model stubs' (user: multimeric) 2025-04-28 00:42:23,045 [ scc.merge] INFO - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) 2025-04-28 00:42:23,045 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2025-04-28 00:42:23,045 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) 2025-04-28 00:42:23,045 [ scc.merge] INFO Already up to date. 2025-04-28 00:42:23,045 [ scc.merge] INFO 2025-04-28 00:42:23,045 [ scc.merge] INFO Merged PRs: 2025-04-28 00:42:23,045 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2025-04-28 00:42:23,045 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2025-04-28 00:42:23,045 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2025-04-28 00:42:23,045 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method' 2025-04-28 00:42:23,045 [ scc.merge] INFO - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' 2025-04-28 00:42:23,045 [ scc.merge] INFO 2025-04-28 00:42:23,045 [ scc.merge] INFO Repository: ome/omero-scripts 2025-04-28 00:42:23,045 [ scc.merge] INFO Excluded PRs: 2025-04-28 00:42:23,045 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-04-28 00:42:23,045 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-04-28 00:42:23,045 [ scc.merge] INFO Already up to date. 2025-04-28 00:42:23,045 [ scc.merge] INFO 2025-04-28 00:42:23,045 [ scc.merge] INFO Merged PRs: 2025-04-28 00:42:23,045 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-04-28 00:42:23,045 [ scc.merge] INFO 2025-04-28 00:42:23,045 [ scc.merge] INFO Conflicting PRs (not included): 2025-04-28 00:42:23,045 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-04-28 00:42:23,045 [ scc.merge] INFO 2025-04-28 00:42:23,045 [ scc.merge] INFO Repository: ome/omero-web 2025-04-28 00:42:23,045 [ scc.merge] INFO Excluded PRs: 2025-04-28 00:42:23,045 [ scc.merge] INFO - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-04-28 00:42:23,045 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2025-04-28 00:42:23,045 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) 2025-04-28 00:42:23,045 [ scc.merge] INFO Already up to date. 2025-04-28 00:42:23,045 [ scc.merge] INFO 2025-04-28 00:42:23,045 [ scc.merge] INFO Merged PRs: 2025-04-28 00:42:23,046 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2025-04-28 00:42:23,046 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-04-28 00:42:23,046 [ scc.merge] INFO - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-04-28 00:42:23,046 [ scc.merge] INFO - PR 596 sukunis 'Linkify can parse anchor tag' 2025-04-28 00:42:23,046 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations' 2025-04-28 00:42:23,046 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf' 2025-04-28 00:42:23,046 [ scc.merge] INFO - PR 606 knabar 'Fix issues related to images with very high channel count' 2025-04-28 00:42:23,046 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-04-28 00:42:23,046 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display' 2025-04-28 00:42:23,046 [ scc.merge] INFO - PR 614 sbesson 'CodeQL workflow updates' 2025-04-28 00:42:23,046 [ scc.merge] INFO - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-04-28 00:42:23,046 [ scc.merge] INFO 2025-04-28 00:42:23,046 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-04-28 00:42:23,046 [ scc.git] DEBUG Calling 'git remote' 2025-04-28 00:42:23,048 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-04-28 00:42:23,048 [ scc.git] DEBUG Calling 'git remote' 2025-04-28 00:42:23,050 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-28 00:42:23,050 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-04-28 00:42:23,050 [ scc.git] DEBUG Calling 'git remote' 2025-04-28 00:42:23,053 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-28 00:42:23,053 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-04-28 00:42:23,053 [ scc.git] DEBUG Calling 'git remote' 2025-04-28 00:42:23,055 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-28 00:42:23,055 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-04-28 00:42:23,055 [ scc.git] DEBUG Calling 'git remote' 2025-04-28 00:42:23,057 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-28 00:42:23,057 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-04-28 00:42:23,057 [ scc.git] DEBUG Calling 'git remote' 2025-04-28 00:42:23,059 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from 01fa0c5 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from 6d44f66 nothing to commit, working tree clean Entering 'omero-py' HEAD detached from e485be49 nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 950b28b nothing to commit, working tree clean Entering 'omero-web' HEAD detached from 4b979f847 nothing to commit, working tree clean HEAD detached from 155f8de nothing to commit, working tree clean 2025-04-28 00:42:51,442 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS