![[Jenkins]](/jenkins/static/daea91b1/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 455 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 155f8de84051621b91200b6b3617c057b622fad4 (refs/remotes/origin/master) Commit message: "Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 155f8de84051621b91200b6b3617c057b622fad4 # timeout=10 > git rev-list --no-walk 155f8de84051621b91200b6b3617c057b622fad4 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 > git submodule update --init --recursive omero-marshal # timeout=10 > git submodule update --init --recursive omero-dropbox # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 411 [Pipeline] sh + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-python-superbuild-push + python3.11 -m venv build/venv > git submodule update --init --recursive omero-scripts # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-25.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-25.1 WARNING: There was an error checking the latest version of pip. + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.6.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.10-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.13.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.18-py2.py3-none-any.whl.metadata (5.7 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-44.0.2-cp39-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.12 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting pycparser (from cffi>=1.12->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (35 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2025.4.26-py3-none-any.whl.metadata (2.5 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.17.2-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached PyGithub-2.6.1-py3-none-any.whl (410 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached cryptography-44.0.2-cp39-abi3-manylinux_2_34_x86_64.whl (4.2 MB) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (467 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (762 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (143 kB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached certifi-2025.4.26-py3-none-any.whl (159 kB) Using cached typing_extensions-4.13.2-py3-none-any.whl (45 kB) Using cached Deprecated-1.2.18-py2.py3-none-any.whl (10.0 kB) Using cached wrapt-1.17.2-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (83 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Using cached ruamel.yaml-0.18.10-py3-none-any.whl (117 kB) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (739 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.18 PyGithub-2.6.1 PyYAML-6.0.2 certifi-2025.4.26 cffi-1.17.1 charset-normalizer-3.4.1 cryptography-44.0.2 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.10 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.13.2 urllib3-1.26.20 wrapt-1.17.2 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-04-29 01:17:35,095 [ scc.config] DEBUG Found github.token 2025-04-29 01:17:35,097 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:35,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-29 01:17:35,548 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:35,737 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-29 01:17:35,988 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:36,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-04-29 01:17:36,149 [ scc.gh] DEBUG 3353 remaining from 5000 (Reset at 01:04 2025-04-29 01:17:36,150 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-04-29 01:17:36,152 [ scc.git] DEBUG Check current status 2025-04-29 01:17:36,152 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-29 01:17:36,155 [ scc.git] DEBUG 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4 2025-04-29 01:17:36,155 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-29 01:17:36,197 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-04-29 01:17:36,200 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-04-29 01:17:36,210 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49) 2025-04-29 01:17:36,214 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-04-29 01:17:36,219 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-04-29 01:17:36,221 [ scc.config] DEBUG Found remote.origin.url 2025-04-29 01:17:36,400 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:36,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-04-29 01:17:36,918 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:37,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-04-29 01:17:37,411 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:37,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-04-29 01:17:37,835 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:38,027 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-04-29 01:17:38,279 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:38,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-04-29 01:17:38,478 [ scc.git] DEBUG Resetting... 2025-04-29 01:17:38,478 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-04-29 01:17:38,483 [ scc.git] DEBUG HEAD is now at 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4 2025-04-29 01:17:38,483 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-04-29 01:17:38,538 [ scc.git] DEBUG Check current status 2025-04-29 01:17:38,538 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-29 01:17:38,540 [ scc.git] DEBUG 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4 2025-04-29 01:17:38,540 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-29 01:17:38,581 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-04-29 01:17:38,584 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-04-29 01:17:38,593 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49) 2025-04-29 01:17:38,597 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-04-29 01:17:38,601 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-04-29 01:17:38,602 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-04-29 01:17:38,602 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-04-29 01:17:38,602 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-04-29 01:17:38,602 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-04-29 01:17:38,602 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-04-29 01:17:38,602 [ scc.repo] DEBUG ## PRs found: 2025-04-29 01:17:38,729 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:38,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2025-04-29 01:17:38,917 [ scc.repo] DEBUG ## Branches found: 2025-04-29 01:17:38,917 [ scc.git] DEBUG Get sha1 of %s 2025-04-29 01:17:38,917 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:17:38,919 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-04-29 01:17:38,921 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-04-29 01:17:38,921 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-04-29 01:17:38,924 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-04-29 01:17:38,927 [ scc.git] DEBUG Already up to date. 2025-04-29 01:17:38,927 [ scc.git] DEBUG ## Unique users: [] 2025-04-29 01:17:38,927 [ scc.git] DEBUG Get sha1 of %s 2025-04-29 01:17:38,927 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:17:38,929 [ scc.git] DEBUG Calling 'git submodule update' 2025-04-29 01:17:38,970 [ scc.git] DEBUG Get sha1 of %s 2025-04-29 01:17:38,971 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:17:38,972 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-04-29 01:17:39,007 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7001254c50> has no local changes 2025-04-29 01:17:39,007 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Generated by OMERO-python-superbuild-push#391 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/391/)' 2025-04-29 01:17:39,032 [ scc.git] DEBUG [detached HEAD 0ae5d9a] merge master -Dorg -Snone 2025-04-29 01:17:39,032 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-04-29 01:17:39,032 [ scc.merge] INFO Already up to date. 2025-04-29 01:17:39,032 [ scc.merge] INFO 2025-04-29 01:17:39,032 [ scc.merge] INFO 2025-04-29 01:17:39,032 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-04-29 01:17:39,032 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-04-29 01:17:40,944 [ scc.config] DEBUG Found github.token 2025-04-29 01:17:40,946 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:41,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-29 01:17:41,384 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:41,546 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-29 01:17:41,798 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:41,965 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-04-29 01:17:41,966 [ scc.gh] DEBUG 3326 remaining from 5000 (Reset at 01:04 2025-04-29 01:17:41,966 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-04-29 01:17:41,969 [ scc.git] DEBUG Check current status 2025-04-29 01:17:41,969 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-29 01:17:41,971 [ scc.git] DEBUG 0ae5d9a merge master -Dorg -Snone 2025-04-29 01:17:41,971 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-29 01:17:42,013 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-04-29 01:17:42,017 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-04-29 01:17:42,025 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49) 2025-04-29 01:17:42,030 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-04-29 01:17:42,034 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-04-29 01:17:42,037 [ scc.config] DEBUG Found remote.origin.url 2025-04-29 01:17:42,037 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-04-29 01:17:42,038 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-04-29 01:17:42,216 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:42,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-04-29 01:17:42,737 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:42,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-04-29 01:17:43,228 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:43,410 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-04-29 01:17:43,662 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:43,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-04-29 01:17:44,083 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:44,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-04-29 01:17:44,255 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-29 01:17:44,301 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-04-29 01:17:44,301 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-04-29 01:17:44,303 [ scc.git] DEBUG Check current status 2025-04-29 01:17:44,304 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-29 01:17:44,306 [ scc.git] DEBUG 01fa0c5 Merge pull request #24 from jburel/build 2025-04-29 01:17:44,306 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-29 01:17:44,345 [ scc.config] DEBUG Found remote.origin.url 2025-04-29 01:17:44,505 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:44,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2025-04-29 01:17:45,026 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:45,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-04-29 01:17:45,508 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:45,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-04-29 01:17:45,929 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:46,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-04-29 01:17:46,373 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:46,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-04-29 01:17:46,555 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-29 01:17:46,593 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-29 01:17:46,594 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-04-29 01:17:46,594 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-04-29 01:17:46,596 [ scc.git] DEBUG Check current status 2025-04-29 01:17:46,596 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-29 01:17:46,599 [ scc.git] DEBUG 6d44f66 Merge pull request #82 from jburel/build 2025-04-29 01:17:46,599 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-29 01:17:46,638 [ scc.config] DEBUG Found remote.origin.url 2025-04-29 01:17:46,805 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:47,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2025-04-29 01:17:47,330 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:47,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-04-29 01:17:47,790 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:47,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-04-29 01:17:48,221 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:48,391 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-04-29 01:17:48,642 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:48,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-04-29 01:17:48,813 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-29 01:17:48,853 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-29 01:17:48,853 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-04-29 01:17:48,854 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-04-29 01:17:48,856 [ scc.git] DEBUG Check current status 2025-04-29 01:17:48,856 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-29 01:17:48,858 [ scc.git] DEBUG e485be49 Merge pull request #427 from Rdornier/mirror-java-download 2025-04-29 01:17:48,858 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-29 01:17:48,899 [ scc.config] DEBUG Found remote.origin.url 2025-04-29 01:17:49,064 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:49,330 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2025-04-29 01:17:49,582 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:49,803 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-04-29 01:17:50,054 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:50,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-04-29 01:17:50,472 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:50,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-04-29 01:17:50,907 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:51,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-04-29 01:17:51,087 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-29 01:17:51,126 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-29 01:17:51,127 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-04-29 01:17:51,127 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-04-29 01:17:51,129 [ scc.git] DEBUG Check current status 2025-04-29 01:17:51,129 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-29 01:17:51,132 [ scc.git] DEBUG 950b28b Merge pull request #225 from will-moore/test_fixes 2025-04-29 01:17:51,132 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-29 01:17:51,171 [ scc.config] DEBUG Found remote.origin.url 2025-04-29 01:17:51,171 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-04-29 01:17:51,338 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:51,584 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2025-04-29 01:17:51,835 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:52,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-04-29 01:17:52,317 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:52,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-04-29 01:17:52,748 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:52,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-04-29 01:17:53,177 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:53,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-04-29 01:17:53,375 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-29 01:17:53,415 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-29 01:17:53,416 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-04-29 01:17:53,416 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-04-29 01:17:53,418 [ scc.git] DEBUG Check current status 2025-04-29 01:17:53,418 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-29 01:17:53,421 [ scc.git] DEBUG 4b979f847 Bump version: 5.29.0 → 5.29.1.dev0 2025-04-29 01:17:53,421 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-29 01:17:53,461 [ scc.config] DEBUG Found remote.origin.url 2025-04-29 01:17:53,625 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:53,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2025-04-29 01:17:54,166 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:54,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-04-29 01:17:54,660 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:54,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-04-29 01:17:55,084 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:55,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-04-29 01:17:55,510 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:55,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-04-29 01:17:55,698 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-29 01:17:55,739 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-29 01:17:55,739 [ scc.git] DEBUG Resetting... 2025-04-29 01:17:55,739 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-04-29 01:17:55,744 [ scc.git] DEBUG HEAD is now at 0ae5d9a merge master -Dorg -Snone 2025-04-29 01:17:55,744 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-04-29 01:17:55,798 [ scc.git] DEBUG Check current status 2025-04-29 01:17:55,798 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-04-29 01:17:55,801 [ scc.git] DEBUG 0ae5d9a merge master -Dorg -Snone 2025-04-29 01:17:55,801 [ scc.git] DEBUG Calling 'git submodule status' 2025-04-29 01:17:55,841 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-04-29 01:17:55,844 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-04-29 01:17:55,853 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49) 2025-04-29 01:17:55,857 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-04-29 01:17:55,861 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-04-29 01:17:55,862 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-04-29 01:17:55,862 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-04-29 01:17:55,862 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-04-29 01:17:55,862 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-04-29 01:17:55,862 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-04-29 01:17:55,862 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-04-29 01:17:55,863 [ scc.repo] DEBUG ## PRs found: 2025-04-29 01:17:55,948 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:56,148 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2025-04-29 01:17:56,149 [ scc.repo] DEBUG ## Branches found: 2025-04-29 01:17:56,149 [ scc.git] DEBUG Get sha1 of %s 2025-04-29 01:17:56,149 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:17:56,151 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-04-29 01:17:56,153 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-04-29 01:17:56,153 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-04-29 01:17:56,156 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-04-29 01:17:56,159 [ scc.git] DEBUG Already up to date. 2025-04-29 01:17:56,159 [ scc.git] DEBUG ## Unique users: [] 2025-04-29 01:17:56,159 [ scc.git] DEBUG Get sha1 of %s 2025-04-29 01:17:56,159 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:17:56,161 [ scc.git] DEBUG Calling 'git submodule update' 2025-04-29 01:17:56,203 [ scc.git] DEBUG Get sha1 of %s 2025-04-29 01:17:56,203 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:17:56,205 [ scc.repo] DEBUG ## PRs found: 2025-04-29 01:17:56,400 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:56,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2025-04-29 01:17:56,920 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:57,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2025-04-29 01:17:57,423 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:57,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2025-04-29 01:17:57,885 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:58,173 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-04-29 01:17:58,425 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:58,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-29 01:17:58,891 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:59,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-04-29 01:17:59,348 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:59,531 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2025-04-29 01:17:59,531 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-04-29 01:17:59,531 [ scc.repo] DEBUG ## Branches found: 2025-04-29 01:17:59,531 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-04-29 01:17:59,532 [ scc.git] DEBUG Get sha1 of %s 2025-04-29 01:17:59,532 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:17:59,534 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-04-29 01:17:59,537 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-04-29 01:17:59,537 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-04-29 01:17:59,540 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-04-29 01:17:59,543 [ scc.git] DEBUG Already up to date. 2025-04-29 01:17:59,543 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2025-04-29 01:17:59,831 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2025-04-29 01:17:59,831 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2025-04-29 01:17:59,835 [ scc.git] DEBUG ## Unique users: [] 2025-04-29 01:17:59,835 [ scc.git] DEBUG Get sha1 of %s 2025-04-29 01:17:59,835 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:17:59,838 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-04-29 01:17:59,841 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:17:59,843 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-04-29 01:17:59,857 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2025-04-29 01:17:59,857 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2025-04-29 01:17:59,857 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2025-04-29 01:17:59,857 [ scc.git] DEBUG Auto-merging src/fsLists.py 2025-04-29 01:17:59,857 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2025-04-29 01:17:59,857 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2025-04-29 01:17:59,857 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2025-04-29 01:17:59,857 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2025-04-29 01:17:59,857 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2025-04-29 01:17:59,858 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-29 01:17:59,862 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2025-04-29 01:17:59,862 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2025-04-29 01:17:59,862 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2025-04-29 01:17:59,862 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2025-04-29 01:17:59,862 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2025-04-29 01:17:59,862 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2025-04-29 01:17:59,862 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2025-04-29 01:17:59,862 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2025-04-29 01:17:59,862 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2025-04-29 01:17:59,863 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:17:59,863 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2025-04-29 01:18:00,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-29 01:18:00,032 [ scc.git] DEBUG Calling 'git submodule update' 2025-04-29 01:18:00,071 [ scc.git] DEBUG Get sha1 of %s 2025-04-29 01:18:00,071 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:18:00,074 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-29 01:18:00,110 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-04-29 01:18:00,115 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff92a4ccf90> has no local changes 2025-04-29 01:18:00,115 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Generated by OMERO-python-superbuild-push#391 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/391/)' 2025-04-29 01:18:00,122 [ scc.git] DEBUG [detached HEAD 7e823b5] merge master -Dorg -Ssuccess-only 2025-04-29 01:18:00,122 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-29 01:18:00,122 [ scc.repo] DEBUG ## PRs found: 2025-04-29 01:18:00,283 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:00,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2025-04-29 01:18:00,881 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:01,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None 2025-04-29 01:18:01,387 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:01,613 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None 2025-04-29 01:18:01,864 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:02,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2025-04-29 01:18:02,357 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:02,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2025-04-29 01:18:02,831 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:03,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-04-29 01:18:03,425 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:03,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-29 01:18:03,880 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:04,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-04-29 01:18:04,338 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:04,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2025-04-29 01:18:04,523 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2025-04-29 01:18:04,774 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:05,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2025-04-29 01:18:05,269 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:05,500 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2025-04-29 01:18:05,752 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:05,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2025-04-29 01:18:06,242 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:06,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2025-04-29 01:18:06,457 [ scc.repo] DEBUG ## Branches found: 2025-04-29 01:18:06,457 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-04-29 01:18:06,457 [ scc.git] DEBUG Get sha1 of %s 2025-04-29 01:18:06,457 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:18:06,460 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-04-29 01:18:06,462 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-04-29 01:18:06,462 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-04-29 01:18:06,465 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-04-29 01:18:06,468 [ scc.git] DEBUG Already up to date. 2025-04-29 01:18:06,468 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2025-04-29 01:18:06,773 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2025-04-29 01:18:06,773 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2025-04-29 01:18:06,778 [ scc.git] DEBUG ## Unique users: [] 2025-04-29 01:18:06,778 [ scc.git] DEBUG Get sha1 of %s 2025-04-29 01:18:06,778 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:18:06,780 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-04-29 01:18:06,784 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:18:06,786 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-04-29 01:18:06,795 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2025-04-29 01:18:06,796 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-29 01:18:06,799 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2025-04-29 01:18:06,799 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2025-04-29 01:18:06,799 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2025-04-29 01:18:06,800 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:06,972 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-29 01:18:06,972 [ scc.git] DEBUG Calling 'git submodule update' 2025-04-29 01:18:07,011 [ scc.git] DEBUG Get sha1 of %s 2025-04-29 01:18:07,011 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:18:07,013 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-29 01:18:07,051 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-04-29 01:18:07,055 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff92a2056d0> has no local changes 2025-04-29 01:18:07,055 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Generated by OMERO-python-superbuild-push#391 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/391/)' 2025-04-29 01:18:07,061 [ scc.git] DEBUG [detached HEAD a719f68] merge master -Dorg -Ssuccess-only 2025-04-29 01:18:07,062 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-29 01:18:07,062 [ scc.repo] DEBUG ## PRs found: 2025-04-29 01:18:07,223 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:07,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2025-04-29 01:18:07,810 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:08,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/453 HTTP/1.1" 200 None 2025-04-29 01:18:08,352 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:08,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/453/comments HTTP/1.1" 200 None 2025-04-29 01:18:08,851 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:09,134 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab HTTP/1.1" 200 None 2025-04-29 01:18:09,386 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:09,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-29 01:18:09,923 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:10,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-29 01:18:10,410 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:10,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab HTTP/1.1" 200 None 2025-04-29 01:18:10,870 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:11,055 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/ff9ad445b6af7725ab17a39185630b8919e42bab?per_page=1 HTTP/1.1" 200 None 2025-04-29 01:18:11,306 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:11,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab HTTP/1.1" 200 None 2025-04-29 01:18:11,824 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:12,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab/status HTTP/1.1" 200 None 2025-04-29 01:18:12,037 [ scc.repo] DEBUG - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' 2025-04-29 01:18:12,288 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:12,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450 HTTP/1.1" 200 None 2025-04-29 01:18:12,784 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:13,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443 HTTP/1.1" 200 None 2025-04-29 01:18:13,293 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:13,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443/comments HTTP/1.1" 200 None 2025-04-29 01:18:13,559 [ scc.repo] DEBUG # ... Exclude label: exclude 2025-04-29 01:18:13,809 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:14,059 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None 2025-04-29 01:18:14,310 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:14,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None 2025-04-29 01:18:14,799 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:15,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-04-29 01:18:15,313 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:15,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-29 01:18:15,818 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:16,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-29 01:18:16,294 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:16,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-04-29 01:18:16,745 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:16,929 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None 2025-04-29 01:18:17,181 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:17,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-04-29 01:18:17,706 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:17,894 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None 2025-04-29 01:18:17,895 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method' 2025-04-29 01:18:18,146 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:18,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2025-04-29 01:18:18,624 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:18,829 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2025-04-29 01:18:19,080 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:19,340 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2025-04-29 01:18:19,591 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:19,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-29 01:18:20,091 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:20,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-29 01:18:20,590 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:20,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2025-04-29 01:18:21,050 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:21,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None 2025-04-29 01:18:21,539 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:21,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-04-29 01:18:22,048 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:22,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-29 01:18:22,528 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:22,750 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-04-29 01:18:23,001 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:23,203 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2 2025-04-29 01:18:23,204 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2025-04-29 01:18:23,454 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:23,672 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2025-04-29 01:18:23,923 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:24,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2025-04-29 01:18:24,433 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:24,702 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-04-29 01:18:24,954 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:25,160 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-29 01:18:25,412 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:25,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-04-29 01:18:25,931 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:26,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 2 2025-04-29 01:18:26,102 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2025-04-29 01:18:26,353 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:26,580 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2025-04-29 01:18:26,831 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:27,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2025-04-29 01:18:27,383 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:27,604 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2025-04-29 01:18:27,856 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:28,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2025-04-29 01:18:28,358 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:28,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-04-29 01:18:28,871 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:29,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-29 01:18:29,329 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:29,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-04-29 01:18:29,850 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:30,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2025-04-29 01:18:30,022 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2025-04-29 01:18:30,022 [ scc.repo] DEBUG ## Branches found: 2025-04-29 01:18:30,022 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-04-29 01:18:30,023 [ scc.git] DEBUG Get sha1 of %s 2025-04-29 01:18:30,023 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:18:30,025 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-04-29 01:18:30,028 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-04-29 01:18:30,028 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-04-29 01:18:30,031 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-04-29 01:18:30,034 [ scc.git] DEBUG Already up to date. 2025-04-29 01:18:30,034 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2025-04-29 01:18:30,347 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-04-29 01:18:30,348 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2025-04-29 01:18:30,352 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2025-04-29 01:18:30,638 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-04-29 01:18:30,638 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2025-04-29 01:18:30,643 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2025-04-29 01:18:30,941 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-04-29 01:18:30,941 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2025-04-29 01:18:30,945 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2025-04-29 01:18:31,230 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-04-29 01:18:31,230 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2025-04-29 01:18:31,235 [ scc.git] DEBUG Calling 'git fetch origin pull/453/head' 2025-04-29 01:18:31,494 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-04-29 01:18:31,494 [ scc.git] DEBUG * branch refs/pull/453/head -> FETCH_HEAD 2025-04-29 01:18:31,499 [ scc.git] DEBUG ## Unique users: [] 2025-04-29 01:18:31,499 [ scc.git] DEBUG Get sha1 of %s 2025-04-29 01:18:31,499 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:18:31,501 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-04-29 01:18:31,513 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:18:31,516 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-04-29 01:18:31,537 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2025-04-29 01:18:31,537 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2025-04-29 01:18:31,539 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-29 01:18:31,543 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2025-04-29 01:18:31,543 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2025-04-29 01:18:31,543 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2025-04-29 01:18:31,544 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:31,752 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-29 01:18:31,753 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-04-29 01:18:31,765 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:18:31,767 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-04-29 01:18:31,787 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-29 01:18:31,790 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2025-04-29 01:18:31,790 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2025-04-29 01:18:31,791 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2025-04-29 01:18:31,791 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2025-04-29 01:18:31,791 [ scc.git] DEBUG create mode 100644 connect.py 2025-04-29 01:18:32,004 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:32,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-29 01:18:32,170 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2025-04-29 01:18:32,182 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:18:32,184 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2025-04-29 01:18:32,206 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2025-04-29 01:18:32,208 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-29 01:18:32,212 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2025-04-29 01:18:32,212 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2025-04-29 01:18:32,421 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:32,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-29 01:18:32,574 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-04-29 01:18:32,587 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:18:32,589 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-04-29 01:18:32,621 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-04-29 01:18:32,622 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-29 01:18:32,629 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------ 2025-04-29 01:18:32,629 [ scc.git] DEBUG 1 file changed, 36 deletions(-) 2025-04-29 01:18:32,825 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:32,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-29 01:18:32,986 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ff9ad445b6af7725ab17a39185630b8919e42bab' 2025-04-29 01:18:32,999 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:18:33,001 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 453 (getObject() and getExternalInfo() load externalInfo) ff9ad445b6af7725ab17a39185630b8919e42bab' 2025-04-29 01:18:33,035 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-04-29 01:18:33,036 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-29 01:18:33,043 [ scc.git] DEBUG src/omero/gateway/__init__.py | 21 ++++++++++++++++++ 2025-04-29 01:18:33,043 [ scc.git] DEBUG src/omero/plugins/obj.py | 50 ++++++++++++++++++++++++++++++++++++++++++- 2025-04-29 01:18:33,043 [ scc.git] DEBUG 2 files changed, 70 insertions(+), 1 deletion(-) 2025-04-29 01:18:33,237 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:33,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-29 01:18:33,402 [ scc.git] DEBUG Calling 'git submodule update' 2025-04-29 01:18:33,441 [ scc.git] DEBUG Get sha1 of %s 2025-04-29 01:18:33,441 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:18:33,444 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-29 01:18:33,482 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-04-29 01:18:33,489 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff92a2ed890> has no local changes 2025-04-29 01:18:33,489 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' Generated by OMERO-python-superbuild-push#391 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/391/)' 2025-04-29 01:18:33,499 [ scc.git] DEBUG [detached HEAD 0f605c51] merge master -Dorg -Ssuccess-only 2025-04-29 01:18:33,499 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-29 01:18:33,499 [ scc.git] INFO Overriding base-branch from master to develop 2025-04-29 01:18:33,499 [ scc.repo] DEBUG ## PRs found: 2025-04-29 01:18:33,653 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:33,953 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-04-29 01:18:34,205 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:36,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-04-29 01:18:36,440 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:36,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-04-29 01:18:36,917 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:37,191 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-04-29 01:18:37,443 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:37,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-29 01:18:37,955 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:38,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-29 01:18:38,439 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:38,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-04-29 01:18:38,977 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:39,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-04-29 01:18:39,169 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-04-29 01:18:39,419 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:39,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-04-29 01:18:39,950 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:40,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-04-29 01:18:40,441 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:40,725 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-04-29 01:18:40,977 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:41,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-29 01:18:41,456 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:41,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-04-29 01:18:41,966 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:42,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-04-29 01:18:42,141 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-04-29 01:18:42,392 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:42,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-04-29 01:18:42,902 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:43,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-04-29 01:18:43,421 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:43,657 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-04-29 01:18:43,909 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:44,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-04-29 01:18:44,214 [ scc.repo] DEBUG ## Branches found: 2025-04-29 01:18:44,214 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-04-29 01:18:44,214 [ scc.git] DEBUG Get sha1 of %s 2025-04-29 01:18:44,214 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:18:44,217 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-04-29 01:18:44,219 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-04-29 01:18:44,219 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-04-29 01:18:44,222 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-04-29 01:18:44,225 [ scc.git] DEBUG Already up to date. 2025-04-29 01:18:44,226 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-04-29 01:18:44,521 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-04-29 01:18:44,521 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-04-29 01:18:44,526 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-04-29 01:18:44,805 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-04-29 01:18:44,805 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-04-29 01:18:44,809 [ scc.git] DEBUG ## Unique users: [] 2025-04-29 01:18:44,809 [ scc.git] DEBUG Get sha1 of %s 2025-04-29 01:18:44,809 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:18:44,812 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-04-29 01:18:44,817 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:18:44,819 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-04-29 01:18:44,830 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-04-29 01:18:44,830 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-04-29 01:18:44,831 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-04-29 01:18:44,833 [ scc.git] DEBUG Calling 'git reset --hard 950b28b31e228ae7b317cbd159235faf4023e4dc' 2025-04-29 01:18:44,837 [ scc.git] DEBUG HEAD is now at 950b28b Merge pull request #225 from will-moore/test_fixes 2025-04-29 01:18:44,838 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:45,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-29 01:18:45,010 [ scc.git] DEBUG Calling 'git merge-base 950b28b31e228ae7b317cbd159235faf4023e4dc 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-04-29 01:18:45,015 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..950b28b31e228ae7b317cbd159235faf4023e4dc' 2025-04-29 01:18:45,019 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#391](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/391/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/391/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-04-29 01:18:45,021 [ scc.config] DEBUG Found github.token 2025-04-29 01:18:45,021 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-04-29 01:18:45,022 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-04-29 01:18:45,026 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:18:45,028 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-04-29 01:18:45,038 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-29 01:18:45,041 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-04-29 01:18:45,041 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-04-29 01:18:45,261 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:45,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-29 01:18:45,438 [ scc.git] DEBUG Calling 'git submodule update' 2025-04-29 01:18:45,481 [ scc.git] DEBUG Get sha1 of %s 2025-04-29 01:18:45,481 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:18:45,484 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-29 01:18:45,522 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-04-29 01:18:45,526 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff92a39acd0> has no local changes 2025-04-29 01:18:45,526 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#391 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/391/)' 2025-04-29 01:18:45,533 [ scc.git] DEBUG [detached HEAD 8e4d877] merge master -Dorg -Ssuccess-only 2025-04-29 01:18:45,533 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-29 01:18:45,534 [ scc.repo] DEBUG ## PRs found: 2025-04-29 01:18:45,690 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:46,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2025-04-29 01:18:46,355 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:46,629 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/617 HTTP/1.1" 200 None 2025-04-29 01:18:46,881 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:47,109 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/616 HTTP/1.1" 200 None 2025-04-29 01:18:47,361 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:47,626 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None 2025-04-29 01:18:47,877 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:48,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-29 01:18:48,380 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:48,617 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-29 01:18:48,869 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:49,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None 2025-04-29 01:18:49,386 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:49,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/c6401a8d78f907d300ef6a6bb673efa86374ecc4?per_page=1 HTTP/1.1" 200 None 2025-04-29 01:18:49,824 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:50,108 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None 2025-04-29 01:18:50,360 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:50,548 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/status HTTP/1.1" 200 None 2025-04-29 01:18:50,549 [ scc.repo] DEBUG - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-04-29 01:18:50,800 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:51,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/614 HTTP/1.1" 200 None 2025-04-29 01:18:51,306 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:51,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/614/comments HTTP/1.1" 200 None 2025-04-29 01:18:51,791 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:52,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-04-29 01:18:52,322 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:52,579 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-29 01:18:52,831 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:53,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-29 01:18:53,405 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:53,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-04-29 01:18:53,898 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:54,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/da14d11b161eb8aa90a6e4729758ea504d5914e3?per_page=1 HTTP/1.1" 200 None 2025-04-29 01:18:54,348 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:54,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-04-29 01:18:54,861 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:55,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/status HTTP/1.1" 200 None 2025-04-29 01:18:55,088 [ scc.repo] DEBUG - PR 614 sbesson 'CodeQL workflow updates' 2025-04-29 01:18:55,338 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:55,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613 HTTP/1.1" 200 None 2025-04-29 01:18:55,813 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:56,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613/comments HTTP/1.1" 200 None 2025-04-29 01:18:56,311 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:56,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d HTTP/1.1" 200 None 2025-04-29 01:18:56,818 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:57,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-29 01:18:57,316 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:57,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-29 01:18:57,801 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:58,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d HTTP/1.1" 200 None 2025-04-29 01:18:58,304 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:58,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/a8c190ba1c823672143ab90d77020d652e2c084d?per_page=1 HTTP/1.1" 200 None 2025-04-29 01:18:58,781 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:59,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d HTTP/1.1" 200 None 2025-04-29 01:18:59,288 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:18:59,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d/status HTTP/1.1" 200 None 2025-04-29 01:18:59,572 [ scc.repo] DEBUG - PR 613 will-moore 'externalInfo display' 2025-04-29 01:18:59,823 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:00,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612 HTTP/1.1" 200 None 2025-04-29 01:19:00,282 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:00,527 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612/comments HTTP/1.1" 200 None 2025-04-29 01:19:00,779 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:01,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-04-29 01:19:01,287 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:01,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-29 01:19:01,788 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:02,078 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-29 01:19:02,329 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:02,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-04-29 01:19:02,771 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:02,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06446bf912b361c22e46c5a0678b3146b91e7e26?per_page=1 HTTP/1.1" 200 None 2025-04-29 01:19:03,230 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:03,473 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-04-29 01:19:03,725 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:03,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/status HTTP/1.1" 200 None 2025-04-29 01:19:03,923 [ scc.repo] DEBUG - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-04-29 01:19:04,173 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:04,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/606 HTTP/1.1" 200 None 2025-04-29 01:19:04,644 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:04,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022 HTTP/1.1" 200 None 2025-04-29 01:19:05,155 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:05,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-29 01:19:05,847 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:06,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-29 01:19:06,363 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:06,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022 HTTP/1.1" 200 None 2025-04-29 01:19:06,861 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:07,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/b360c3125f9471bf4001447f35c732507c2f2022?per_page=1 HTTP/1.1" 200 None 2025-04-29 01:19:07,305 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:07,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022 HTTP/1.1" 200 None 2025-04-29 01:19:07,750 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:07,957 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022/status HTTP/1.1" 200 None 2025-04-29 01:19:07,958 [ scc.repo] DEBUG - PR 606 knabar 'Fix issues related to images with very high channel count' 2025-04-29 01:19:08,209 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:08,429 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None 2025-04-29 01:19:08,680 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:08,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None 2025-04-29 01:19:09,186 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:09,440 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-04-29 01:19:09,691 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:09,956 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-29 01:19:10,207 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:10,421 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-29 01:19:10,673 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:10,946 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-04-29 01:19:11,197 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:11,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None 2025-04-29 01:19:11,647 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:11,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-04-29 01:19:12,143 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:12,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None 2025-04-29 01:19:12,329 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf' 2025-04-29 01:19:12,580 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:12,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None 2025-04-29 01:19:13,072 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:13,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-04-29 01:19:13,591 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:13,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-29 01:19:14,096 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:14,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-29 01:19:14,597 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:14,805 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-04-29 01:19:15,056 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:15,244 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 None 2025-04-29 01:19:15,496 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:15,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-04-29 01:19:16,008 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:16,231 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/status HTTP/1.1" 200 None 2025-04-29 01:19:16,232 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations' 2025-04-29 01:19:16,483 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:16,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596 HTTP/1.1" 200 None 2025-04-29 01:19:16,966 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:17,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596/comments HTTP/1.1" 200 None 2025-04-29 01:19:17,465 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:17,726 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-04-29 01:19:17,977 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:18,212 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-29 01:19:18,464 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:18,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-29 01:19:18,965 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:19,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-04-29 01:19:19,538 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:19,719 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/3aae48f586d7b412538a45b34ddc471a26a286e8?per_page=1 HTTP/1.1" 200 None 2025-04-29 01:19:19,970 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:20,182 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-04-29 01:19:20,433 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:20,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/status HTTP/1.1" 200 None 2025-04-29 01:19:20,651 [ scc.repo] DEBUG - PR 596 sukunis 'Linkify can parse anchor tag' 2025-04-29 01:19:20,902 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:21,130 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595 HTTP/1.1" 200 None 2025-04-29 01:19:21,381 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:21,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595/comments HTTP/1.1" 200 None 2025-04-29 01:19:21,848 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:22,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-04-29 01:19:22,369 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:22,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-29 01:19:22,883 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:23,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-29 01:19:23,384 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:23,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-04-29 01:19:23,880 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:24,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/30278b64bb39134a3f1101b600d4a82256e6eaeb?per_page=1 HTTP/1.1" 200 None 2025-04-29 01:19:24,357 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:24,576 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-04-29 01:19:24,827 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:25,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/status HTTP/1.1" 200 None 2025-04-29 01:19:25,023 [ scc.repo] DEBUG - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-04-29 01:19:25,273 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:25,487 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2025-04-29 01:19:25,738 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:25,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None 2025-04-29 01:19:26,219 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:26,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2025-04-29 01:19:26,688 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:26,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2025-04-29 01:19:27,176 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:27,434 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-04-29 01:19:27,686 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:27,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-29 01:19:28,163 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:28,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-04-29 01:19:28,687 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:28,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 2 2025-04-29 01:19:28,892 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-04-29 01:19:29,143 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:29,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2025-04-29 01:19:29,626 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:29,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2025-04-29 01:19:30,113 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:30,395 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-04-29 01:19:30,647 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:30,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-29 01:19:31,139 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:31,401 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-04-29 01:19:31,653 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:31,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 2 2025-04-29 01:19:31,834 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2025-04-29 01:19:32,085 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:32,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2025-04-29 01:19:32,580 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:32,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2025-04-29 01:19:33,084 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:33,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2025-04-29 01:19:33,596 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:33,878 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-04-29 01:19:34,129 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:34,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-04-29 01:19:34,363 [ scc.repo] DEBUG ## Branches found: 2025-04-29 01:19:34,363 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-04-29 01:19:34,363 [ scc.git] DEBUG Get sha1 of %s 2025-04-29 01:19:34,363 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:19:34,366 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-04-29 01:19:34,369 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-04-29 01:19:34,369 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-04-29 01:19:34,372 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-04-29 01:19:34,376 [ scc.git] DEBUG Already up to date. 2025-04-29 01:19:34,376 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2025-04-29 01:19:34,696 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-29 01:19:34,697 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2025-04-29 01:19:34,701 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2025-04-29 01:19:34,983 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-29 01:19:34,983 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2025-04-29 01:19:34,988 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2025-04-29 01:19:35,248 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-29 01:19:35,249 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2025-04-29 01:19:35,254 [ scc.git] DEBUG Calling 'git fetch origin pull/596/head' 2025-04-29 01:19:35,514 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-29 01:19:35,514 [ scc.git] DEBUG * branch refs/pull/596/head -> FETCH_HEAD 2025-04-29 01:19:35,519 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head' 2025-04-29 01:19:35,781 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-29 01:19:35,782 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD 2025-04-29 01:19:35,786 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head' 2025-04-29 01:19:36,060 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-29 01:19:36,061 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD 2025-04-29 01:19:36,065 [ scc.git] DEBUG Calling 'git fetch origin pull/606/head' 2025-04-29 01:19:36,331 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-29 01:19:36,331 [ scc.git] DEBUG * branch refs/pull/606/head -> FETCH_HEAD 2025-04-29 01:19:36,335 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head' 2025-04-29 01:19:36,624 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-29 01:19:36,624 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD 2025-04-29 01:19:36,628 [ scc.git] DEBUG Calling 'git fetch origin pull/613/head' 2025-04-29 01:19:36,894 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-29 01:19:36,894 [ scc.git] DEBUG * branch refs/pull/613/head -> FETCH_HEAD 2025-04-29 01:19:36,898 [ scc.git] DEBUG Calling 'git fetch origin pull/614/head' 2025-04-29 01:19:37,160 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-29 01:19:37,160 [ scc.git] DEBUG * branch refs/pull/614/head -> FETCH_HEAD 2025-04-29 01:19:37,164 [ scc.git] DEBUG Calling 'git fetch origin pull/616/head' 2025-04-29 01:19:37,440 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-04-29 01:19:37,441 [ scc.git] DEBUG * branch refs/pull/616/head -> FETCH_HEAD 2025-04-29 01:19:37,445 [ scc.git] DEBUG ## Unique users: [] 2025-04-29 01:19:37,445 [ scc.git] DEBUG Get sha1 of %s 2025-04-29 01:19:37,445 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:19:37,447 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-04-29 01:19:37,455 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:19:37,457 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-04-29 01:19:37,477 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-04-29 01:19:37,477 [ scc.git] DEBUG Auto-merging setup.py 2025-04-29 01:19:37,479 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-29 01:19:37,482 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2025-04-29 01:19:37,482 [ scc.git] DEBUG setup.py | 1 + 2025-04-29 01:19:37,482 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2025-04-29 01:19:37,484 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:37,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-29 01:19:37,648 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-04-29 01:19:37,657 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:19:37,659 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-04-29 01:19:37,681 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2025-04-29 01:19:37,681 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2025-04-29 01:19:37,682 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-29 01:19:37,687 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2025-04-29 01:19:37,687 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2025-04-29 01:19:37,687 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2025-04-29 01:19:37,899 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:38,088 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-29 01:19:38,089 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-04-29 01:19:38,097 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:19:38,100 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (linkify supports urls that include {}[] characters) 30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-04-29 01:19:38,120 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-29 01:19:38,124 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +- 2025-04-29 01:19:38,124 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-04-29 01:19:38,340 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:38,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-29 01:19:38,501 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-04-29 01:19:38,511 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:19:38,513 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Linkify can parse anchor tag) 3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-04-29 01:19:38,533 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-29 01:19:38,537 [ scc.git] DEBUG .../webclient/javascript/ome.webclient.actions.js | 26 ++++++++++++++++++++-- 2025-04-29 01:19:38,537 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2025-04-29 01:19:38,752 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:38,922 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-29 01:19:38,922 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539' 2025-04-29 01:19:38,931 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:19:38,933 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539' 2025-04-29 01:19:38,956 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-29 01:19:38,962 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 - 2025-04-29 01:19:38,962 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++-- 2025-04-29 01:19:38,962 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++- 2025-04-29 01:19:38,962 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +- 2025-04-29 01:19:38,962 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++- 2025-04-29 01:19:38,962 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++-- 2025-04-29 01:19:38,962 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++-- 2025-04-29 01:19:38,962 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++----- 2025-04-29 01:19:38,962 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 + 2025-04-29 01:19:38,962 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +- 2025-04-29 01:19:38,962 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++-- 2025-04-29 01:19:38,962 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-) 2025-04-29 01:19:39,173 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:39,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-29 01:19:39,330 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-04-29 01:19:39,338 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:19:39,340 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-04-29 01:19:39,366 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py 2025-04-29 01:19:39,368 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-29 01:19:39,374 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------ 2025-04-29 01:19:39,374 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +--- 2025-04-29 01:19:39,374 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 ----------------- 2025-04-29 01:19:39,374 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-) 2025-04-29 01:19:39,580 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:39,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-29 01:19:39,756 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b360c3125f9471bf4001447f35c732507c2f2022' 2025-04-29 01:19:39,765 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:19:39,767 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 606 (Fix issues related to images with very high channel count) b360c3125f9471bf4001447f35c732507c2f2022' 2025-04-29 01:19:39,790 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-29 01:19:39,795 [ scc.git] DEBUG .../webgateway/static/webgateway/js/ome.viewport.js | 17 +++++++++++++++-- 2025-04-29 01:19:39,795 [ scc.git] DEBUG 1 file changed, 15 insertions(+), 2 deletions(-) 2025-04-29 01:19:40,007 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:40,170 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-29 01:19:40,171 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-04-29 01:19:40,179 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:19:40,181 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Allow top_links to wrap if too many for space) 06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-04-29 01:19:40,203 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-29 01:19:40,207 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.body.css | 2 ++ 2025-04-29 01:19:40,207 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.header.css | 21 +++++++++++---------- 2025-04-29 01:19:40,207 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 10 deletions(-) 2025-04-29 01:19:40,422 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:40,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-29 01:19:40,574 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a8c190ba1c823672143ab90d77020d652e2c084d' 2025-04-29 01:19:40,582 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:19:40,584 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 613 (externalInfo display) a8c190ba1c823672143ab90d77020d652e2c084d' 2025-04-29 01:19:40,605 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-29 01:19:40,609 [ scc.git] DEBUG .../webclient/annotations/includes/toolbar.html | 42 ++++++++++++++++------ 2025-04-29 01:19:40,609 [ scc.git] DEBUG .../webclient/annotations/metadata_general.html | 38 ++++++++++++++------ 2025-04-29 01:19:40,609 [ scc.git] DEBUG 2 files changed, 60 insertions(+), 20 deletions(-) 2025-04-29 01:19:40,825 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:40,981 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-29 01:19:40,981 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...da14d11b161eb8aa90a6e4729758ea504d5914e3' 2025-04-29 01:19:40,990 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:19:40,993 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 614 (CodeQL workflow updates) da14d11b161eb8aa90a6e4729758ea504d5914e3' 2025-04-29 01:19:41,012 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-29 01:19:41,015 [ scc.git] DEBUG .github/workflows/codeql-analysis.yml | 55 +++++++---------------------------- 2025-04-29 01:19:41,015 [ scc.git] DEBUG 1 file changed, 11 insertions(+), 44 deletions(-) 2025-04-29 01:19:41,232 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:41,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-29 01:19:41,394 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c6401a8d78f907d300ef6a6bb673efa86374ecc4' 2025-04-29 01:19:41,403 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:19:41,405 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 616 (Use the release/v1 branch for the PyPA action publishing to PyPI) c6401a8d78f907d300ef6a6bb673efa86374ecc4' 2025-04-29 01:19:41,424 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-04-29 01:19:41,427 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-04-29 01:19:41,427 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-04-29 01:19:41,645 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:41,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-29 01:19:41,810 [ scc.git] DEBUG Calling 'git submodule update' 2025-04-29 01:19:41,850 [ scc.git] DEBUG Get sha1 of %s 2025-04-29 01:19:41,850 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-04-29 01:19:41,852 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-29 01:19:41,891 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-04-29 01:19:41,899 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff92b317b10> has no local changes 2025-04-29 01:19:41,899 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 606 knabar 'Fix issues related to images with very high channel count' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 614 sbesson 'CodeQL workflow updates' - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-python-superbuild-push#391 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/391/)' 2025-04-29 01:19:41,909 [ scc.git] DEBUG [detached HEAD 1495bec1d] merge master -Dorg -Ssuccess-only 2025-04-29 01:19:41,910 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-29 01:19:41,910 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-04-29 01:19:41,957 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2025-04-29 01:19:42,061 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:42,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-29 01:19:42,238 [ scc.config] DEBUG Found submodule.omero-marshal.url 2025-04-29 01:19:42,481 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:42,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-29 01:19:42,646 [ scc.config] DEBUG Found submodule.omero-py.url 2025-04-29 01:19:42,890 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:43,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-29 01:19:43,077 [ scc.config] DEBUG Found submodule.omero-scripts.url 2025-04-29 01:19:43,321 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:43,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-29 01:19:43,490 [ scc.config] DEBUG Found submodule.omero-web.url 2025-04-29 01:19:43,735 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-04-29 01:19:43,889 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-04-29 01:19:43,894 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-04-29 01:19:43,924 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7ff92a430450> has local changes 2025-04-29 01:19:43,924 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Repository: ome/omero-py Excluded PRs: - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 606 knabar 'Fix issues related to images with very high channel count' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 614 sbesson 'CodeQL workflow updates' - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-python-superbuild-push#391 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/391/)' 2025-04-29 01:19:43,932 [ scc.git] DEBUG [detached HEAD eb8af57] merge master -Dorg -Ssuccess-only 2025-04-29 01:19:43,932 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2025-04-29 01:19:43,932 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-04-29 01:19:43,932 [ scc.merge] INFO Already up to date. 2025-04-29 01:19:43,932 [ scc.merge] INFO 2025-04-29 01:19:43,932 [ scc.merge] INFO 2025-04-29 01:19:43,932 [ scc.merge] INFO Repository: ome/omero-dropbox 2025-04-29 01:19:43,932 [ scc.merge] INFO Already up to date. 2025-04-29 01:19:43,932 [ scc.merge] INFO 2025-04-29 01:19:43,932 [ scc.merge] INFO Merged PRs: 2025-04-29 01:19:43,932 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-04-29 01:19:43,932 [ scc.merge] INFO 2025-04-29 01:19:43,932 [ scc.merge] INFO Repository: ome/omero-marshal 2025-04-29 01:19:43,932 [ scc.merge] INFO Excluded PRs: 2025-04-29 01:19:43,932 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) 2025-04-29 01:19:43,932 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2025-04-29 01:19:43,933 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2025-04-29 01:19:43,933 [ scc.merge] INFO Already up to date. 2025-04-29 01:19:43,933 [ scc.merge] INFO 2025-04-29 01:19:43,933 [ scc.merge] INFO Merged PRs: 2025-04-29 01:19:43,933 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2025-04-29 01:19:43,933 [ scc.merge] INFO 2025-04-29 01:19:43,933 [ scc.merge] INFO Repository: ome/omero-py 2025-04-29 01:19:43,933 [ scc.merge] INFO Excluded PRs: 2025-04-29 01:19:43,933 [ scc.merge] INFO - PR 450 multimeric 'Add model stubs' (user: multimeric) 2025-04-29 01:19:43,933 [ scc.merge] INFO - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) 2025-04-29 01:19:43,933 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2025-04-29 01:19:43,933 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) 2025-04-29 01:19:43,933 [ scc.merge] INFO Already up to date. 2025-04-29 01:19:43,933 [ scc.merge] INFO 2025-04-29 01:19:43,933 [ scc.merge] INFO Merged PRs: 2025-04-29 01:19:43,933 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2025-04-29 01:19:43,933 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2025-04-29 01:19:43,933 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2025-04-29 01:19:43,933 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method' 2025-04-29 01:19:43,933 [ scc.merge] INFO - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' 2025-04-29 01:19:43,933 [ scc.merge] INFO 2025-04-29 01:19:43,933 [ scc.merge] INFO Repository: ome/omero-scripts 2025-04-29 01:19:43,933 [ scc.merge] INFO Excluded PRs: 2025-04-29 01:19:43,933 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-04-29 01:19:43,933 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-04-29 01:19:43,933 [ scc.merge] INFO Already up to date. 2025-04-29 01:19:43,933 [ scc.merge] INFO 2025-04-29 01:19:43,933 [ scc.merge] INFO Merged PRs: 2025-04-29 01:19:43,933 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-04-29 01:19:43,933 [ scc.merge] INFO 2025-04-29 01:19:43,933 [ scc.merge] INFO Conflicting PRs (not included): 2025-04-29 01:19:43,933 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-04-29 01:19:43,933 [ scc.merge] INFO 2025-04-29 01:19:43,933 [ scc.merge] INFO Repository: ome/omero-web 2025-04-29 01:19:43,933 [ scc.merge] INFO Excluded PRs: 2025-04-29 01:19:43,933 [ scc.merge] INFO - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-04-29 01:19:43,933 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2025-04-29 01:19:43,933 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) 2025-04-29 01:19:43,933 [ scc.merge] INFO Already up to date. 2025-04-29 01:19:43,933 [ scc.merge] INFO 2025-04-29 01:19:43,933 [ scc.merge] INFO Merged PRs: 2025-04-29 01:19:43,933 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2025-04-29 01:19:43,934 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-04-29 01:19:43,934 [ scc.merge] INFO - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-04-29 01:19:43,934 [ scc.merge] INFO - PR 596 sukunis 'Linkify can parse anchor tag' 2025-04-29 01:19:43,934 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations' 2025-04-29 01:19:43,934 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf' 2025-04-29 01:19:43,934 [ scc.merge] INFO - PR 606 knabar 'Fix issues related to images with very high channel count' 2025-04-29 01:19:43,934 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-04-29 01:19:43,934 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display' 2025-04-29 01:19:43,934 [ scc.merge] INFO - PR 614 sbesson 'CodeQL workflow updates' 2025-04-29 01:19:43,934 [ scc.merge] INFO - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-04-29 01:19:43,934 [ scc.merge] INFO 2025-04-29 01:19:43,934 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-04-29 01:19:43,934 [ scc.git] DEBUG Calling 'git remote' 2025-04-29 01:19:43,936 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-04-29 01:19:43,936 [ scc.git] DEBUG Calling 'git remote' 2025-04-29 01:19:43,938 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-29 01:19:43,938 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-04-29 01:19:43,938 [ scc.git] DEBUG Calling 'git remote' 2025-04-29 01:19:43,940 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-29 01:19:43,940 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-04-29 01:19:43,940 [ scc.git] DEBUG Calling 'git remote' 2025-04-29 01:19:43,943 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-29 01:19:43,943 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-04-29 01:19:43,943 [ scc.git] DEBUG Calling 'git remote' 2025-04-29 01:19:43,945 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-04-29 01:19:43,945 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-04-29 01:19:43,945 [ scc.git] DEBUG Calling 'git remote' 2025-04-29 01:19:43,947 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from 01fa0c5 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from 6d44f66 nothing to commit, working tree clean Entering 'omero-py' HEAD detached from e485be49 nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 950b28b nothing to commit, working tree clean Entering 'omero-web' HEAD detached from 4b979f847 nothing to commit, working tree clean HEAD detached from 155f8de nothing to commit, working tree clean 2025-04-29 01:20:12,531 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS