![[Jenkins]](/jenkins/static/03ee4b55/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 458 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 155f8de84051621b91200b6b3617c057b622fad4 (refs/remotes/origin/master) Commit message: "Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 155f8de84051621b91200b6b3617c057b622fad4 # timeout=10 > git rev-list --no-walk 155f8de84051621b91200b6b3617c057b622fad4 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 413 [Pipeline] sh + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-python-superbuild-push + python3.11 -m venv build/venv > git submodule update --init --recursive omero-marshal # timeout=10 > git submodule update --init --recursive omero-dropbox # timeout=10 > git submodule update --init --recursive omero-scripts # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-25.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-25.1 WARNING: There was an error checking the latest version of pip. + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.6.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.10-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.13.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.18-py2.py3-none-any.whl.metadata (5.7 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-44.0.2-cp39-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.12 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting pycparser (from cffi>=1.12->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (35 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2025.4.26-py3-none-any.whl.metadata (2.5 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.17.2-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached PyGithub-2.6.1-py3-none-any.whl (410 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached cryptography-44.0.2-cp39-abi3-manylinux_2_34_x86_64.whl (4.2 MB) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (467 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (762 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (143 kB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached certifi-2025.4.26-py3-none-any.whl (159 kB) Using cached typing_extensions-4.13.2-py3-none-any.whl (45 kB) Using cached Deprecated-1.2.18-py2.py3-none-any.whl (10.0 kB) Using cached wrapt-1.17.2-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (83 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Using cached ruamel.yaml-0.18.10-py3-none-any.whl (117 kB) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (739 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.18 PyGithub-2.6.1 PyYAML-6.0.2 certifi-2025.4.26 cffi-1.17.1 charset-normalizer-3.4.1 cryptography-44.0.2 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.10 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.13.2 urllib3-1.26.20 wrapt-1.17.2 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-05-02 00:43:39,422 [ scc.config] DEBUG Found github.token 2025-05-02 00:43:39,424 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:39,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-02 00:43:39,852 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:40,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-02 00:43:40,277 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:40,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-05-02 00:43:40,429 [ scc.gh] DEBUG 4428 remaining from 5000 (Reset at 00:05 2025-05-02 00:43:40,429 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-05-02 00:43:40,432 [ scc.git] DEBUG Check current status 2025-05-02 00:43:40,432 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-02 00:43:40,435 [ scc.git] DEBUG 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4 2025-05-02 00:43:40,435 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-02 00:43:40,480 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-05-02 00:43:40,483 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-05-02 00:43:40,493 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49) 2025-05-02 00:43:40,499 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-05-02 00:43:40,503 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-05-02 00:43:40,507 [ scc.config] DEBUG Found remote.origin.url 2025-05-02 00:43:40,680 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:40,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-05-02 00:43:41,206 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:41,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-05-02 00:43:41,687 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:41,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-05-02 00:43:42,126 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:42,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-05-02 00:43:42,595 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:42,785 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-05-02 00:43:42,786 [ scc.git] DEBUG Resetting... 2025-05-02 00:43:42,786 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-05-02 00:43:42,791 [ scc.git] DEBUG HEAD is now at 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4 2025-05-02 00:43:42,792 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-05-02 00:43:42,853 [ scc.git] DEBUG Check current status 2025-05-02 00:43:42,853 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-02 00:43:42,855 [ scc.git] DEBUG 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4 2025-05-02 00:43:42,855 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-02 00:43:42,902 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-05-02 00:43:42,907 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-05-02 00:43:42,916 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49) 2025-05-02 00:43:42,921 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-05-02 00:43:42,926 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-05-02 00:43:42,927 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-05-02 00:43:42,927 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-05-02 00:43:42,927 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-05-02 00:43:42,927 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-05-02 00:43:42,927 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-05-02 00:43:42,927 [ scc.repo] DEBUG ## PRs found: 2025-05-02 00:43:43,037 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:43,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2025-05-02 00:43:43,239 [ scc.repo] DEBUG ## Branches found: 2025-05-02 00:43:43,239 [ scc.git] DEBUG Get sha1 of %s 2025-05-02 00:43:43,239 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:43:43,242 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-05-02 00:43:43,244 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-05-02 00:43:43,244 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-05-02 00:43:43,247 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-05-02 00:43:43,250 [ scc.git] DEBUG Already up to date. 2025-05-02 00:43:43,250 [ scc.git] DEBUG ## Unique users: [] 2025-05-02 00:43:43,250 [ scc.git] DEBUG Get sha1 of %s 2025-05-02 00:43:43,250 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:43:43,252 [ scc.git] DEBUG Calling 'git submodule update' 2025-05-02 00:43:43,297 [ scc.git] DEBUG Get sha1 of %s 2025-05-02 00:43:43,297 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:43:43,299 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-05-02 00:43:43,339 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f7e4f9fc950> has no local changes 2025-05-02 00:43:43,339 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Generated by OMERO-python-superbuild-push#393 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/393/)' 2025-05-02 00:43:43,367 [ scc.git] DEBUG [detached HEAD 85f0419] merge master -Dorg -Snone 2025-05-02 00:43:43,367 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-05-02 00:43:43,367 [ scc.merge] INFO Already up to date. 2025-05-02 00:43:43,367 [ scc.merge] INFO 2025-05-02 00:43:43,367 [ scc.merge] INFO 2025-05-02 00:43:43,367 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-05-02 00:43:43,367 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-05-02 00:43:45,403 [ scc.config] DEBUG Found github.token 2025-05-02 00:43:45,405 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:45,603 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-02 00:43:45,856 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:46,029 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-02 00:43:46,282 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:46,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-05-02 00:43:46,446 [ scc.gh] DEBUG 4420 remaining from 5000 (Reset at 00:05 2025-05-02 00:43:46,446 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-05-02 00:43:46,449 [ scc.git] DEBUG Check current status 2025-05-02 00:43:46,449 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-02 00:43:46,451 [ scc.git] DEBUG 85f0419 merge master -Dorg -Snone 2025-05-02 00:43:46,452 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-02 00:43:46,492 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-05-02 00:43:46,496 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-05-02 00:43:46,505 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49) 2025-05-02 00:43:46,510 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-05-02 00:43:46,514 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-05-02 00:43:46,517 [ scc.config] DEBUG Found remote.origin.url 2025-05-02 00:43:46,517 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-05-02 00:43:46,518 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-05-02 00:43:46,697 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:46,945 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-05-02 00:43:47,197 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:47,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-05-02 00:43:47,710 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:47,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-05-02 00:43:48,136 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:48,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-05-02 00:43:48,570 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:48,767 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-05-02 00:43:48,769 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-02 00:43:48,820 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-05-02 00:43:48,820 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-05-02 00:43:48,823 [ scc.git] DEBUG Check current status 2025-05-02 00:43:48,823 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-02 00:43:48,826 [ scc.git] DEBUG 01fa0c5 Merge pull request #24 from jburel/build 2025-05-02 00:43:48,826 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-02 00:43:48,872 [ scc.config] DEBUG Found remote.origin.url 2025-05-02 00:43:49,019 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:49,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2025-05-02 00:43:49,555 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:49,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-05-02 00:43:50,096 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:50,298 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-05-02 00:43:50,550 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:50,733 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-05-02 00:43:50,985 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:51,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-05-02 00:43:51,159 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-02 00:43:51,202 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-02 00:43:51,203 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-05-02 00:43:51,203 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-05-02 00:43:51,205 [ scc.git] DEBUG Check current status 2025-05-02 00:43:51,205 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-02 00:43:51,208 [ scc.git] DEBUG 6d44f66 Merge pull request #82 from jburel/build 2025-05-02 00:43:51,208 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-02 00:43:51,253 [ scc.config] DEBUG Found remote.origin.url 2025-05-02 00:43:51,410 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:51,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2025-05-02 00:43:51,949 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:52,187 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-05-02 00:43:52,439 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:52,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-05-02 00:43:52,897 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:53,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-05-02 00:43:53,323 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:53,497 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-05-02 00:43:53,499 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-02 00:43:53,541 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-02 00:43:53,542 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-05-02 00:43:53,542 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-05-02 00:43:53,544 [ scc.git] DEBUG Check current status 2025-05-02 00:43:53,544 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-02 00:43:53,547 [ scc.git] DEBUG e485be49 Merge pull request #427 from Rdornier/mirror-java-download 2025-05-02 00:43:53,547 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-02 00:43:53,593 [ scc.config] DEBUG Found remote.origin.url 2025-05-02 00:43:53,749 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:54,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2025-05-02 00:43:54,317 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:54,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-05-02 00:43:54,817 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:54,996 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-05-02 00:43:55,249 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:55,431 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-05-02 00:43:55,683 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:55,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-05-02 00:43:55,861 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-02 00:43:55,903 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-02 00:43:55,904 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-05-02 00:43:55,904 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-05-02 00:43:55,906 [ scc.git] DEBUG Check current status 2025-05-02 00:43:55,906 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-02 00:43:55,909 [ scc.git] DEBUG 950b28b Merge pull request #225 from will-moore/test_fixes 2025-05-02 00:43:55,909 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-02 00:43:55,953 [ scc.config] DEBUG Found remote.origin.url 2025-05-02 00:43:55,953 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-05-02 00:43:56,112 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:56,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2025-05-02 00:43:56,643 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:56,877 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-05-02 00:43:57,128 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:57,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-05-02 00:43:57,562 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:57,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-05-02 00:43:58,030 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:58,219 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-05-02 00:43:58,220 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-02 00:43:58,262 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-02 00:43:58,263 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-05-02 00:43:58,263 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-05-02 00:43:58,266 [ scc.git] DEBUG Check current status 2025-05-02 00:43:58,266 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-02 00:43:58,269 [ scc.git] DEBUG 4b979f847 Bump version: 5.29.0 → 5.29.1.dev0 2025-05-02 00:43:58,269 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-02 00:43:58,311 [ scc.config] DEBUG Found remote.origin.url 2025-05-02 00:43:58,471 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:58,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2025-05-02 00:43:58,983 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:59,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-05-02 00:43:59,465 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:43:59,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-05-02 00:43:59,889 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:00,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-05-02 00:44:00,322 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:00,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-05-02 00:44:00,538 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-02 00:44:00,583 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-02 00:44:00,583 [ scc.git] DEBUG Resetting... 2025-05-02 00:44:00,583 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-05-02 00:44:00,588 [ scc.git] DEBUG HEAD is now at 85f0419 merge master -Dorg -Snone 2025-05-02 00:44:00,588 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-05-02 00:44:00,647 [ scc.git] DEBUG Check current status 2025-05-02 00:44:00,647 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-02 00:44:00,649 [ scc.git] DEBUG 85f0419 merge master -Dorg -Snone 2025-05-02 00:44:00,650 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-02 00:44:00,694 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-05-02 00:44:00,698 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-05-02 00:44:00,708 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49) 2025-05-02 00:44:00,713 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-05-02 00:44:00,718 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-05-02 00:44:00,719 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-05-02 00:44:00,719 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-05-02 00:44:00,719 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-05-02 00:44:00,719 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-05-02 00:44:00,719 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-05-02 00:44:00,720 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-05-02 00:44:00,720 [ scc.repo] DEBUG ## PRs found: 2025-05-02 00:44:00,789 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:00,966 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2025-05-02 00:44:00,966 [ scc.repo] DEBUG ## Branches found: 2025-05-02 00:44:00,966 [ scc.git] DEBUG Get sha1 of %s 2025-05-02 00:44:00,966 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:44:00,969 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-05-02 00:44:00,972 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-05-02 00:44:00,972 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-05-02 00:44:00,974 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-05-02 00:44:00,977 [ scc.git] DEBUG Already up to date. 2025-05-02 00:44:00,977 [ scc.git] DEBUG ## Unique users: [] 2025-05-02 00:44:00,978 [ scc.git] DEBUG Get sha1 of %s 2025-05-02 00:44:00,978 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:44:00,980 [ scc.git] DEBUG Calling 'git submodule update' 2025-05-02 00:44:01,023 [ scc.git] DEBUG Get sha1 of %s 2025-05-02 00:44:01,023 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:44:01,026 [ scc.repo] DEBUG ## PRs found: 2025-05-02 00:44:01,218 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:01,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2025-05-02 00:44:01,729 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:01,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2025-05-02 00:44:02,243 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:02,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2025-05-02 00:44:02,757 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:03,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-05-02 00:44:03,324 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:03,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-02 00:44:03,805 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:04,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-05-02 00:44:04,370 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:04,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2025-05-02 00:44:04,551 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-05-02 00:44:04,551 [ scc.repo] DEBUG ## Branches found: 2025-05-02 00:44:04,551 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-05-02 00:44:04,551 [ scc.git] DEBUG Get sha1 of %s 2025-05-02 00:44:04,552 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:44:04,555 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-05-02 00:44:04,557 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-05-02 00:44:04,557 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-05-02 00:44:04,560 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-05-02 00:44:04,564 [ scc.git] DEBUG Already up to date. 2025-05-02 00:44:04,564 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2025-05-02 00:44:04,852 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2025-05-02 00:44:04,852 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2025-05-02 00:44:04,857 [ scc.git] DEBUG ## Unique users: [] 2025-05-02 00:44:04,858 [ scc.git] DEBUG Get sha1 of %s 2025-05-02 00:44:04,858 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:44:04,860 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-05-02 00:44:04,864 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:44:04,866 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-05-02 00:44:04,880 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2025-05-02 00:44:04,880 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2025-05-02 00:44:04,880 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2025-05-02 00:44:04,880 [ scc.git] DEBUG Auto-merging src/fsLists.py 2025-05-02 00:44:04,880 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2025-05-02 00:44:04,880 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2025-05-02 00:44:04,880 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2025-05-02 00:44:04,880 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2025-05-02 00:44:04,880 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2025-05-02 00:44:04,881 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-02 00:44:04,885 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2025-05-02 00:44:04,885 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2025-05-02 00:44:04,885 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2025-05-02 00:44:04,885 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2025-05-02 00:44:04,885 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2025-05-02 00:44:04,885 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2025-05-02 00:44:04,885 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2025-05-02 00:44:04,885 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2025-05-02 00:44:04,885 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2025-05-02 00:44:04,885 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2025-05-02 00:44:04,886 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:05,061 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-02 00:44:05,061 [ scc.git] DEBUG Calling 'git submodule update' 2025-05-02 00:44:05,103 [ scc.git] DEBUG Get sha1 of %s 2025-05-02 00:44:05,103 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:44:05,105 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-02 00:44:05,143 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-05-02 00:44:05,147 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc85c78fa90> has no local changes 2025-05-02 00:44:05,148 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Generated by OMERO-python-superbuild-push#393 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/393/)' 2025-05-02 00:44:05,154 [ scc.git] DEBUG [detached HEAD 8a0ce9d] merge master -Dorg -Ssuccess-only 2025-05-02 00:44:05,154 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-02 00:44:05,154 [ scc.repo] DEBUG ## PRs found: 2025-05-02 00:44:05,312 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:05,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2025-05-02 00:44:05,906 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:06,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None 2025-05-02 00:44:06,410 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:06,650 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None 2025-05-02 00:44:06,902 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:07,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2025-05-02 00:44:07,380 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:07,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2025-05-02 00:44:07,863 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:08,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-05-02 00:44:08,442 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:08,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-02 00:44:08,925 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:09,227 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-05-02 00:44:09,479 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:09,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2025-05-02 00:44:09,905 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2025-05-02 00:44:10,156 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:10,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2025-05-02 00:44:10,635 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:10,861 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2025-05-02 00:44:11,113 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:11,359 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2025-05-02 00:44:11,611 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:11,822 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2025-05-02 00:44:11,823 [ scc.repo] DEBUG ## Branches found: 2025-05-02 00:44:11,823 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-05-02 00:44:11,823 [ scc.git] DEBUG Get sha1 of %s 2025-05-02 00:44:11,823 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:44:11,826 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-05-02 00:44:11,829 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-05-02 00:44:11,829 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-05-02 00:44:11,832 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-05-02 00:44:11,835 [ scc.git] DEBUG Already up to date. 2025-05-02 00:44:11,835 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2025-05-02 00:44:12,163 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2025-05-02 00:44:12,164 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2025-05-02 00:44:12,169 [ scc.git] DEBUG ## Unique users: [] 2025-05-02 00:44:12,169 [ scc.git] DEBUG Get sha1 of %s 2025-05-02 00:44:12,169 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:44:12,172 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-05-02 00:44:12,176 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:44:12,178 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-05-02 00:44:12,188 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2025-05-02 00:44:12,189 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-02 00:44:12,192 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2025-05-02 00:44:12,192 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2025-05-02 00:44:12,192 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2025-05-02 00:44:12,194 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:12,354 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-02 00:44:12,354 [ scc.git] DEBUG Calling 'git submodule update' 2025-05-02 00:44:12,399 [ scc.git] DEBUG Get sha1 of %s 2025-05-02 00:44:12,399 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:44:12,401 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-02 00:44:12,444 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-05-02 00:44:12,448 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc85d7255d0> has no local changes 2025-05-02 00:44:12,448 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Generated by OMERO-python-superbuild-push#393 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/393/)' 2025-05-02 00:44:12,456 [ scc.git] DEBUG [detached HEAD 9fe9d28] merge master -Dorg -Ssuccess-only 2025-05-02 00:44:12,456 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-02 00:44:12,456 [ scc.repo] DEBUG ## PRs found: 2025-05-02 00:44:12,606 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:12,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2025-05-02 00:44:13,233 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:13,461 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/453 HTTP/1.1" 200 None 2025-05-02 00:44:13,713 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:13,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/453/comments HTTP/1.1" 200 None 2025-05-02 00:44:14,237 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:14,526 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab HTTP/1.1" 200 None 2025-05-02 00:44:14,778 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:15,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-02 00:44:15,314 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:15,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-02 00:44:15,805 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:15,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab HTTP/1.1" 200 None 2025-05-02 00:44:16,245 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:16,446 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/ff9ad445b6af7725ab17a39185630b8919e42bab?per_page=1 HTTP/1.1" 200 None 2025-05-02 00:44:16,698 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:16,907 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab HTTP/1.1" 200 None 2025-05-02 00:44:17,159 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:17,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab/status HTTP/1.1" 200 None 2025-05-02 00:44:17,364 [ scc.repo] DEBUG - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' 2025-05-02 00:44:17,615 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:17,848 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450 HTTP/1.1" 200 None 2025-05-02 00:44:18,100 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:18,343 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443 HTTP/1.1" 200 None 2025-05-02 00:44:18,595 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:18,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443/comments HTTP/1.1" 200 None 2025-05-02 00:44:18,845 [ scc.repo] DEBUG # ... Exclude label: exclude 2025-05-02 00:44:19,095 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:19,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None 2025-05-02 00:44:19,588 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:19,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None 2025-05-02 00:44:20,075 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:20,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-05-02 00:44:20,603 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:20,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-02 00:44:21,114 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:21,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-02 00:44:21,612 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:21,873 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-05-02 00:44:22,125 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:22,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None 2025-05-02 00:44:22,575 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:22,840 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-05-02 00:44:23,092 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:23,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None 2025-05-02 00:44:23,284 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method' 2025-05-02 00:44:23,536 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:23,779 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2025-05-02 00:44:24,031 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:24,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2025-05-02 00:44:24,492 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:24,745 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2025-05-02 00:44:24,997 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:25,270 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-02 00:44:25,522 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:25,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-02 00:44:26,066 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:26,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2025-05-02 00:44:26,526 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:26,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None 2025-05-02 00:44:27,007 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:27,286 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-05-02 00:44:27,539 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:27,747 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-02 00:44:27,999 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:28,272 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-05-02 00:44:28,524 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:28,717 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2 2025-05-02 00:44:28,717 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2025-05-02 00:44:28,969 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:29,200 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2025-05-02 00:44:29,452 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:29,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2025-05-02 00:44:29,954 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:30,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-05-02 00:44:30,487 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:30,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-02 00:44:30,955 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:31,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-05-02 00:44:31,488 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:31,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 2 2025-05-02 00:44:31,688 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2025-05-02 00:44:31,939 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:32,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2025-05-02 00:44:32,415 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:32,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2025-05-02 00:44:32,918 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:33,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2025-05-02 00:44:33,407 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:33,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2025-05-02 00:44:33,947 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:34,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-05-02 00:44:34,476 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:34,696 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-02 00:44:34,948 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:35,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-05-02 00:44:35,407 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:35,586 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2025-05-02 00:44:35,586 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2025-05-02 00:44:35,588 [ scc.repo] DEBUG ## Branches found: 2025-05-02 00:44:35,588 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-05-02 00:44:35,588 [ scc.git] DEBUG Get sha1 of %s 2025-05-02 00:44:35,588 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:44:35,591 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-05-02 00:44:35,594 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-05-02 00:44:35,594 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-05-02 00:44:35,597 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-05-02 00:44:35,600 [ scc.git] DEBUG Already up to date. 2025-05-02 00:44:35,600 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2025-05-02 00:44:35,947 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-05-02 00:44:35,947 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2025-05-02 00:44:35,952 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2025-05-02 00:44:36,248 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-05-02 00:44:36,248 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2025-05-02 00:44:36,254 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2025-05-02 00:44:36,540 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-05-02 00:44:36,540 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2025-05-02 00:44:36,545 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2025-05-02 00:44:36,847 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-05-02 00:44:36,847 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2025-05-02 00:44:36,853 [ scc.git] DEBUG Calling 'git fetch origin pull/453/head' 2025-05-02 00:44:37,135 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-05-02 00:44:37,135 [ scc.git] DEBUG * branch refs/pull/453/head -> FETCH_HEAD 2025-05-02 00:44:37,141 [ scc.git] DEBUG ## Unique users: [] 2025-05-02 00:44:37,141 [ scc.git] DEBUG Get sha1 of %s 2025-05-02 00:44:37,141 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:44:37,144 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-05-02 00:44:37,158 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:44:37,161 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-05-02 00:44:37,186 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2025-05-02 00:44:37,186 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2025-05-02 00:44:37,188 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-02 00:44:37,193 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2025-05-02 00:44:37,193 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2025-05-02 00:44:37,193 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2025-05-02 00:44:37,195 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:37,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-02 00:44:37,364 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-05-02 00:44:37,377 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:44:37,380 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-05-02 00:44:37,403 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-02 00:44:37,406 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2025-05-02 00:44:37,406 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2025-05-02 00:44:37,406 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2025-05-02 00:44:37,406 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2025-05-02 00:44:37,406 [ scc.git] DEBUG create mode 100644 connect.py 2025-05-02 00:44:37,615 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:37,784 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-02 00:44:37,784 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2025-05-02 00:44:37,798 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:44:37,801 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2025-05-02 00:44:37,827 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2025-05-02 00:44:37,828 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-02 00:44:37,833 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2025-05-02 00:44:37,833 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2025-05-02 00:44:38,036 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:38,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-02 00:44:38,193 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-05-02 00:44:38,207 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:44:38,210 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-05-02 00:44:38,247 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-05-02 00:44:38,248 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-02 00:44:38,256 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------ 2025-05-02 00:44:38,256 [ scc.git] DEBUG 1 file changed, 36 deletions(-) 2025-05-02 00:44:38,444 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:38,612 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-02 00:44:38,613 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ff9ad445b6af7725ab17a39185630b8919e42bab' 2025-05-02 00:44:38,627 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:44:38,630 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 453 (getObject() and getExternalInfo() load externalInfo) ff9ad445b6af7725ab17a39185630b8919e42bab' 2025-05-02 00:44:38,670 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-05-02 00:44:38,672 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-02 00:44:38,681 [ scc.git] DEBUG src/omero/gateway/__init__.py | 21 ++++++++++++++++++ 2025-05-02 00:44:38,681 [ scc.git] DEBUG src/omero/plugins/obj.py | 50 ++++++++++++++++++++++++++++++++++++++++++- 2025-05-02 00:44:38,681 [ scc.git] DEBUG 2 files changed, 70 insertions(+), 1 deletion(-) 2025-05-02 00:44:38,864 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:39,022 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-02 00:44:39,022 [ scc.git] DEBUG Calling 'git submodule update' 2025-05-02 00:44:39,069 [ scc.git] DEBUG Get sha1 of %s 2025-05-02 00:44:39,069 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:44:39,072 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-02 00:44:39,118 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-05-02 00:44:39,125 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc85c771b90> has no local changes 2025-05-02 00:44:39,126 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' Generated by OMERO-python-superbuild-push#393 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/393/)' 2025-05-02 00:44:39,135 [ scc.git] DEBUG [detached HEAD 9f678c97] merge master -Dorg -Ssuccess-only 2025-05-02 00:44:39,135 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-02 00:44:39,136 [ scc.git] INFO Overriding base-branch from master to develop 2025-05-02 00:44:39,136 [ scc.repo] DEBUG ## PRs found: 2025-05-02 00:44:39,274 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:39,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-05-02 00:44:39,848 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:40,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-05-02 00:44:40,444 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:40,677 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-05-02 00:44:40,930 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:41,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-05-02 00:44:41,494 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:41,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-02 00:44:42,006 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:42,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-02 00:44:42,500 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:42,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-05-02 00:44:43,024 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:43,217 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-05-02 00:44:43,218 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-05-02 00:44:43,469 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:43,689 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-05-02 00:44:43,941 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:44,169 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-05-02 00:44:44,422 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:44,731 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-05-02 00:44:44,984 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:45,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-02 00:44:45,482 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:45,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-05-02 00:44:45,951 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:46,155 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-05-02 00:44:46,155 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-05-02 00:44:46,407 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:46,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-05-02 00:44:46,899 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:47,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-05-02 00:44:47,437 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:47,668 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-05-02 00:44:47,921 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:48,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-05-02 00:44:48,265 [ scc.repo] DEBUG ## Branches found: 2025-05-02 00:44:48,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-05-02 00:44:48,265 [ scc.git] DEBUG Get sha1 of %s 2025-05-02 00:44:48,265 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:44:48,268 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-05-02 00:44:48,270 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-05-02 00:44:48,271 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-05-02 00:44:48,274 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-05-02 00:44:48,277 [ scc.git] DEBUG Already up to date. 2025-05-02 00:44:48,277 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-05-02 00:44:48,612 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-05-02 00:44:48,612 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-05-02 00:44:48,617 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-05-02 00:44:48,902 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-05-02 00:44:48,902 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-05-02 00:44:48,907 [ scc.git] DEBUG ## Unique users: [] 2025-05-02 00:44:48,907 [ scc.git] DEBUG Get sha1 of %s 2025-05-02 00:44:48,907 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:44:48,910 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-05-02 00:44:48,915 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:44:48,918 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-05-02 00:44:48,930 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-05-02 00:44:48,931 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-05-02 00:44:48,931 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-05-02 00:44:48,934 [ scc.git] DEBUG Calling 'git reset --hard 950b28b31e228ae7b317cbd159235faf4023e4dc' 2025-05-02 00:44:48,938 [ scc.git] DEBUG HEAD is now at 950b28b Merge pull request #225 from will-moore/test_fixes 2025-05-02 00:44:48,940 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:49,105 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-02 00:44:49,106 [ scc.git] DEBUG Calling 'git merge-base 950b28b31e228ae7b317cbd159235faf4023e4dc 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-05-02 00:44:49,112 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..950b28b31e228ae7b317cbd159235faf4023e4dc' 2025-05-02 00:44:49,116 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#393](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/393/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/393/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-05-02 00:44:49,119 [ scc.config] DEBUG Found github.token 2025-05-02 00:44:49,119 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-05-02 00:44:49,119 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-05-02 00:44:49,124 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:44:49,126 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-05-02 00:44:49,137 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-02 00:44:49,140 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-05-02 00:44:49,140 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-05-02 00:44:49,357 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:49,525 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-02 00:44:49,525 [ scc.git] DEBUG Calling 'git submodule update' 2025-05-02 00:44:49,568 [ scc.git] DEBUG Get sha1 of %s 2025-05-02 00:44:49,568 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:44:49,571 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-02 00:44:49,613 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-05-02 00:44:49,618 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc85c906250> has no local changes 2025-05-02 00:44:49,618 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#393 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/393/)' 2025-05-02 00:44:49,625 [ scc.git] DEBUG [detached HEAD c460079] merge master -Dorg -Ssuccess-only 2025-05-02 00:44:49,625 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-02 00:44:49,625 [ scc.repo] DEBUG ## PRs found: 2025-05-02 00:44:49,777 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:50,225 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2025-05-02 00:44:50,491 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:50,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/617 HTTP/1.1" 200 None 2025-05-02 00:44:50,975 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:51,194 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/616 HTTP/1.1" 200 None 2025-05-02 00:44:51,446 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:51,741 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None 2025-05-02 00:44:51,993 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:52,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-02 00:44:52,509 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:52,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-02 00:44:52,995 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:53,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None 2025-05-02 00:44:53,569 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:53,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/c6401a8d78f907d300ef6a6bb673efa86374ecc4?per_page=1 HTTP/1.1" 200 None 2025-05-02 00:44:54,020 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:54,303 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None 2025-05-02 00:44:54,555 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:54,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/status HTTP/1.1" 200 None 2025-05-02 00:44:54,744 [ scc.repo] DEBUG - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-05-02 00:44:54,995 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:55,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/614 HTTP/1.1" 200 None 2025-05-02 00:44:55,466 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:55,710 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/614/comments HTTP/1.1" 200 None 2025-05-02 00:44:55,962 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:56,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-05-02 00:44:56,484 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:56,751 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-02 00:44:57,003 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:57,248 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-02 00:44:57,500 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:57,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-05-02 00:44:58,032 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:58,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/da14d11b161eb8aa90a6e4729758ea504d5914e3?per_page=1 HTTP/1.1" 200 None 2025-05-02 00:44:58,472 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:58,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-05-02 00:44:58,995 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:59,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/status HTTP/1.1" 200 None 2025-05-02 00:44:59,185 [ scc.repo] DEBUG - PR 614 sbesson 'CodeQL workflow updates' 2025-05-02 00:44:59,436 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:44:59,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613 HTTP/1.1" 200 None 2025-05-02 00:44:59,930 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:00,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613/comments HTTP/1.1" 200 None 2025-05-02 00:45:00,476 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:00,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d HTTP/1.1" 200 None 2025-05-02 00:45:00,996 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:01,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-02 00:45:01,551 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:01,838 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-02 00:45:02,090 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:02,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d HTTP/1.1" 200 None 2025-05-02 00:45:02,562 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:02,768 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/a8c190ba1c823672143ab90d77020d652e2c084d?per_page=1 HTTP/1.1" 200 None 2025-05-02 00:45:03,019 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:03,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d HTTP/1.1" 200 None 2025-05-02 00:45:03,551 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:03,804 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d/status HTTP/1.1" 200 None 2025-05-02 00:45:03,805 [ scc.repo] DEBUG - PR 613 will-moore 'externalInfo display' 2025-05-02 00:45:04,056 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:04,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612 HTTP/1.1" 200 None 2025-05-02 00:45:04,565 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:04,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612/comments HTTP/1.1" 200 None 2025-05-02 00:45:05,068 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:05,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-05-02 00:45:05,592 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:05,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-02 00:45:06,118 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:06,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-02 00:45:06,676 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:06,935 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-05-02 00:45:07,187 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:07,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06446bf912b361c22e46c5a0678b3146b91e7e26?per_page=1 HTTP/1.1" 200 None 2025-05-02 00:45:07,626 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:07,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-05-02 00:45:08,094 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:08,293 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/status HTTP/1.1" 200 None 2025-05-02 00:45:08,294 [ scc.repo] DEBUG - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-05-02 00:45:08,545 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:08,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/606 HTTP/1.1" 200 None 2025-05-02 00:45:09,037 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:09,315 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022 HTTP/1.1" 200 None 2025-05-02 00:45:09,567 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:09,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-02 00:45:10,048 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:10,414 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-02 00:45:10,666 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:10,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022 HTTP/1.1" 200 None 2025-05-02 00:45:11,133 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:11,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/b360c3125f9471bf4001447f35c732507c2f2022?per_page=1 HTTP/1.1" 200 None 2025-05-02 00:45:11,591 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:11,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022 HTTP/1.1" 200 None 2025-05-02 00:45:12,071 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:12,269 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/b360c3125f9471bf4001447f35c732507c2f2022/status HTTP/1.1" 200 None 2025-05-02 00:45:12,270 [ scc.repo] DEBUG - PR 606 knabar 'Fix issues related to images with very high channel count' 2025-05-02 00:45:12,521 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:12,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None 2025-05-02 00:45:13,070 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:13,295 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None 2025-05-02 00:45:13,547 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:13,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-05-02 00:45:14,093 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:14,325 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-02 00:45:14,577 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:14,871 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-02 00:45:15,123 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:15,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-05-02 00:45:15,646 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:15,860 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None 2025-05-02 00:45:16,112 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:16,313 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-05-02 00:45:16,565 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:16,771 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None 2025-05-02 00:45:16,772 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf' 2025-05-02 00:45:17,023 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:17,289 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None 2025-05-02 00:45:17,540 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:17,810 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-05-02 00:45:18,062 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:18,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-02 00:45:18,591 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:18,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-02 00:45:19,109 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:19,324 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-05-02 00:45:19,576 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:19,776 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 None 2025-05-02 00:45:20,028 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:20,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-05-02 00:45:20,526 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:20,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/status HTTP/1.1" 200 None 2025-05-02 00:45:20,718 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations' 2025-05-02 00:45:20,969 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:21,215 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596 HTTP/1.1" 200 None 2025-05-02 00:45:21,467 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:21,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596/comments HTTP/1.1" 200 None 2025-05-02 00:45:21,938 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:22,224 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-05-02 00:45:22,475 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:22,755 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-02 00:45:23,007 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:23,258 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-02 00:45:23,510 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:23,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-05-02 00:45:24,011 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:24,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/3aae48f586d7b412538a45b34ddc471a26a286e8?per_page=1 HTTP/1.1" 200 None 2025-05-02 00:45:24,506 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:24,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-05-02 00:45:24,966 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:25,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/status HTTP/1.1" 200 None 2025-05-02 00:45:25,176 [ scc.repo] DEBUG - PR 596 sukunis 'Linkify can parse anchor tag' 2025-05-02 00:45:25,427 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:25,669 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595 HTTP/1.1" 200 None 2025-05-02 00:45:25,921 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:26,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595/comments HTTP/1.1" 200 None 2025-05-02 00:45:26,390 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:26,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-05-02 00:45:26,908 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:27,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-02 00:45:27,437 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:27,684 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-02 00:45:27,936 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:28,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-05-02 00:45:28,486 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:28,685 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/30278b64bb39134a3f1101b600d4a82256e6eaeb?per_page=1 HTTP/1.1" 200 None 2025-05-02 00:45:28,937 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:29,136 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-05-02 00:45:29,389 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:29,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/status HTTP/1.1" 200 None 2025-05-02 00:45:29,584 [ scc.repo] DEBUG - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-05-02 00:45:29,835 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:30,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2025-05-02 00:45:30,324 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:30,547 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None 2025-05-02 00:45:30,799 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:31,046 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2025-05-02 00:45:31,298 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:31,553 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2025-05-02 00:45:31,805 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:32,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-05-02 00:45:32,338 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:32,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-02 00:45:32,819 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:33,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-05-02 00:45:33,346 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:33,520 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 2 2025-05-02 00:45:33,521 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-05-02 00:45:33,772 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:34,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2025-05-02 00:45:34,287 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:34,606 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2025-05-02 00:45:34,858 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:35,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-05-02 00:45:35,364 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:35,573 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-02 00:45:35,825 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:36,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-05-02 00:45:36,268 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:36,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 2 2025-05-02 00:45:36,506 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2025-05-02 00:45:36,757 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:36,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2025-05-02 00:45:37,243 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:37,508 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2025-05-02 00:45:37,761 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:38,026 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2025-05-02 00:45:38,278 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:38,512 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-02 00:45:38,766 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:39,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-02 00:45:39,102 [ scc.repo] DEBUG ## Branches found: 2025-05-02 00:45:39,102 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-05-02 00:45:39,102 [ scc.git] DEBUG Get sha1 of %s 2025-05-02 00:45:39,102 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:45:39,106 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-05-02 00:45:39,109 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-05-02 00:45:39,110 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-05-02 00:45:39,115 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-05-02 00:45:39,121 [ scc.git] DEBUG Already up to date. 2025-05-02 00:45:39,122 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2025-05-02 00:45:39,422 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-02 00:45:39,422 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2025-05-02 00:45:39,430 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2025-05-02 00:45:39,739 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-02 00:45:39,739 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2025-05-02 00:45:39,748 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2025-05-02 00:45:40,036 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-02 00:45:40,036 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2025-05-02 00:45:40,043 [ scc.git] DEBUG Calling 'git fetch origin pull/596/head' 2025-05-02 00:45:40,366 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-02 00:45:40,367 [ scc.git] DEBUG * branch refs/pull/596/head -> FETCH_HEAD 2025-05-02 00:45:40,374 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head' 2025-05-02 00:45:40,681 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-02 00:45:40,681 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD 2025-05-02 00:45:40,688 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head' 2025-05-02 00:45:40,976 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-02 00:45:40,977 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD 2025-05-02 00:45:40,983 [ scc.git] DEBUG Calling 'git fetch origin pull/606/head' 2025-05-02 00:45:41,256 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-02 00:45:41,256 [ scc.git] DEBUG * branch refs/pull/606/head -> FETCH_HEAD 2025-05-02 00:45:41,264 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head' 2025-05-02 00:45:41,545 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-02 00:45:41,545 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD 2025-05-02 00:45:41,556 [ scc.git] DEBUG Calling 'git fetch origin pull/613/head' 2025-05-02 00:45:41,842 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-02 00:45:41,842 [ scc.git] DEBUG * branch refs/pull/613/head -> FETCH_HEAD 2025-05-02 00:45:41,850 [ scc.git] DEBUG Calling 'git fetch origin pull/614/head' 2025-05-02 00:45:42,141 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-02 00:45:42,141 [ scc.git] DEBUG * branch refs/pull/614/head -> FETCH_HEAD 2025-05-02 00:45:42,151 [ scc.git] DEBUG Calling 'git fetch origin pull/616/head' 2025-05-02 00:45:42,452 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-02 00:45:42,452 [ scc.git] DEBUG * branch refs/pull/616/head -> FETCH_HEAD 2025-05-02 00:45:42,463 [ scc.git] DEBUG ## Unique users: [] 2025-05-02 00:45:42,464 [ scc.git] DEBUG Get sha1 of %s 2025-05-02 00:45:42,464 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:45:42,469 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-05-02 00:45:42,482 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:45:42,488 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-05-02 00:45:42,518 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-05-02 00:45:42,518 [ scc.git] DEBUG Auto-merging setup.py 2025-05-02 00:45:42,520 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-02 00:45:42,527 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2025-05-02 00:45:42,527 [ scc.git] DEBUG setup.py | 1 + 2025-05-02 00:45:42,527 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2025-05-02 00:45:42,529 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:42,715 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-02 00:45:42,716 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-05-02 00:45:42,728 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:45:42,732 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-05-02 00:45:42,760 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2025-05-02 00:45:42,761 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2025-05-02 00:45:42,762 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-02 00:45:42,769 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2025-05-02 00:45:42,769 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2025-05-02 00:45:42,769 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2025-05-02 00:45:42,967 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:43,205 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-02 00:45:43,207 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-05-02 00:45:43,218 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:45:43,222 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (linkify supports urls that include {}[] characters) 30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-05-02 00:45:43,249 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-02 00:45:43,255 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +- 2025-05-02 00:45:43,255 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-05-02 00:45:43,458 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:43,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-02 00:45:43,657 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-05-02 00:45:43,668 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:45:43,671 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Linkify can parse anchor tag) 3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-05-02 00:45:43,698 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-02 00:45:43,704 [ scc.git] DEBUG .../webclient/javascript/ome.webclient.actions.js | 26 ++++++++++++++++++++-- 2025-05-02 00:45:43,704 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2025-05-02 00:45:43,908 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:44,091 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-02 00:45:44,093 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539' 2025-05-02 00:45:44,105 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:45:44,113 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539' 2025-05-02 00:45:44,148 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-02 00:45:44,158 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 - 2025-05-02 00:45:44,158 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++-- 2025-05-02 00:45:44,158 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++- 2025-05-02 00:45:44,158 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +- 2025-05-02 00:45:44,158 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++- 2025-05-02 00:45:44,158 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++-- 2025-05-02 00:45:44,158 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++-- 2025-05-02 00:45:44,158 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++----- 2025-05-02 00:45:44,158 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 + 2025-05-02 00:45:44,158 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +- 2025-05-02 00:45:44,158 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++-- 2025-05-02 00:45:44,158 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-) 2025-05-02 00:45:44,345 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:44,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-02 00:45:44,520 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-05-02 00:45:44,535 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:45:44,539 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-05-02 00:45:44,579 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py 2025-05-02 00:45:44,581 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-02 00:45:44,592 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------ 2025-05-02 00:45:44,592 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +--- 2025-05-02 00:45:44,592 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 ----------------- 2025-05-02 00:45:44,592 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-) 2025-05-02 00:45:44,772 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:44,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-02 00:45:44,932 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b360c3125f9471bf4001447f35c732507c2f2022' 2025-05-02 00:45:44,945 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:45:44,950 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 606 (Fix issues related to images with very high channel count) b360c3125f9471bf4001447f35c732507c2f2022' 2025-05-02 00:45:44,989 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-02 00:45:44,999 [ scc.git] DEBUG .../webgateway/static/webgateway/js/ome.viewport.js | 17 +++++++++++++++-- 2025-05-02 00:45:44,999 [ scc.git] DEBUG 1 file changed, 15 insertions(+), 2 deletions(-) 2025-05-02 00:45:45,183 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:45,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-02 00:45:45,358 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-05-02 00:45:45,375 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:45:45,382 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Allow top_links to wrap if too many for space) 06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-05-02 00:45:45,417 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-02 00:45:45,426 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.body.css | 2 ++ 2025-05-02 00:45:45,427 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.header.css | 21 +++++++++++---------- 2025-05-02 00:45:45,427 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 10 deletions(-) 2025-05-02 00:45:45,611 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:45,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-02 00:45:45,788 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a8c190ba1c823672143ab90d77020d652e2c084d' 2025-05-02 00:45:45,802 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:45:45,808 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 613 (externalInfo display) a8c190ba1c823672143ab90d77020d652e2c084d' 2025-05-02 00:45:45,843 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-02 00:45:45,854 [ scc.git] DEBUG .../webclient/annotations/includes/toolbar.html | 42 ++++++++++++++++------ 2025-05-02 00:45:45,855 [ scc.git] DEBUG .../webclient/annotations/metadata_general.html | 38 ++++++++++++++------ 2025-05-02 00:45:45,855 [ scc.git] DEBUG 2 files changed, 60 insertions(+), 20 deletions(-) 2025-05-02 00:45:46,041 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:46,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-02 00:45:46,212 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...da14d11b161eb8aa90a6e4729758ea504d5914e3' 2025-05-02 00:45:46,228 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:45:46,235 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 614 (CodeQL workflow updates) da14d11b161eb8aa90a6e4729758ea504d5914e3' 2025-05-02 00:45:46,264 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-02 00:45:46,271 [ scc.git] DEBUG .github/workflows/codeql-analysis.yml | 55 +++++++---------------------------- 2025-05-02 00:45:46,271 [ scc.git] DEBUG 1 file changed, 11 insertions(+), 44 deletions(-) 2025-05-02 00:45:46,467 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:46,656 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-02 00:45:46,658 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c6401a8d78f907d300ef6a6bb673efa86374ecc4' 2025-05-02 00:45:46,674 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:45:46,680 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 616 (Use the release/v1 branch for the PyPA action publishing to PyPI) c6401a8d78f907d300ef6a6bb673efa86374ecc4' 2025-05-02 00:45:46,712 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-02 00:45:46,722 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-05-02 00:45:46,723 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-05-02 00:45:46,910 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:47,082 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-02 00:45:47,085 [ scc.git] DEBUG Calling 'git submodule update' 2025-05-02 00:45:47,172 [ scc.git] DEBUG Get sha1 of %s 2025-05-02 00:45:47,173 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-02 00:45:47,177 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-02 00:45:47,264 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-05-02 00:45:47,277 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc85d1fb710> has no local changes 2025-05-02 00:45:47,278 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 606 knabar 'Fix issues related to images with very high channel count' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 614 sbesson 'CodeQL workflow updates' - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-python-superbuild-push#393 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/393/)' 2025-05-02 00:45:47,294 [ scc.git] DEBUG [detached HEAD f03345d79] merge master -Dorg -Ssuccess-only 2025-05-02 00:45:47,295 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-02 00:45:47,295 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-02 00:45:47,404 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2025-05-02 00:45:47,408 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:47,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-02 00:45:47,596 [ scc.config] DEBUG Found submodule.omero-marshal.url 2025-05-02 00:45:47,834 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:47,999 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-02 00:45:48,013 [ scc.config] DEBUG Found submodule.omero-py.url 2025-05-02 00:45:48,252 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:48,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-02 00:45:48,439 [ scc.config] DEBUG Found submodule.omero-scripts.url 2025-05-02 00:45:48,680 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:48,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-02 00:45:48,855 [ scc.config] DEBUG Found submodule.omero-web.url 2025-05-02 00:45:49,097 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-02 00:45:49,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-02 00:45:49,287 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-05-02 00:45:49,346 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fc85c9cb350> has local changes 2025-05-02 00:45:49,346 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Repository: ome/omero-py Excluded PRs: - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 606 knabar 'Fix issues related to images with very high channel count' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 614 sbesson 'CodeQL workflow updates' - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-python-superbuild-push#393 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/393/)' 2025-05-02 00:45:49,365 [ scc.git] DEBUG [detached HEAD 1a4f564] merge master -Dorg -Ssuccess-only 2025-05-02 00:45:49,365 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2025-05-02 00:45:49,365 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-05-02 00:45:49,365 [ scc.merge] INFO Already up to date. 2025-05-02 00:45:49,365 [ scc.merge] INFO 2025-05-02 00:45:49,365 [ scc.merge] INFO 2025-05-02 00:45:49,365 [ scc.merge] INFO Repository: ome/omero-dropbox 2025-05-02 00:45:49,365 [ scc.merge] INFO Already up to date. 2025-05-02 00:45:49,365 [ scc.merge] INFO 2025-05-02 00:45:49,365 [ scc.merge] INFO Merged PRs: 2025-05-02 00:45:49,365 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-05-02 00:45:49,365 [ scc.merge] INFO 2025-05-02 00:45:49,365 [ scc.merge] INFO Repository: ome/omero-marshal 2025-05-02 00:45:49,366 [ scc.merge] INFO Excluded PRs: 2025-05-02 00:45:49,366 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) 2025-05-02 00:45:49,366 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2025-05-02 00:45:49,366 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2025-05-02 00:45:49,366 [ scc.merge] INFO Already up to date. 2025-05-02 00:45:49,366 [ scc.merge] INFO 2025-05-02 00:45:49,366 [ scc.merge] INFO Merged PRs: 2025-05-02 00:45:49,366 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2025-05-02 00:45:49,366 [ scc.merge] INFO 2025-05-02 00:45:49,366 [ scc.merge] INFO Repository: ome/omero-py 2025-05-02 00:45:49,366 [ scc.merge] INFO Excluded PRs: 2025-05-02 00:45:49,366 [ scc.merge] INFO - PR 450 multimeric 'Add model stubs' (user: multimeric) 2025-05-02 00:45:49,366 [ scc.merge] INFO - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) 2025-05-02 00:45:49,366 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2025-05-02 00:45:49,366 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) 2025-05-02 00:45:49,366 [ scc.merge] INFO Already up to date. 2025-05-02 00:45:49,366 [ scc.merge] INFO 2025-05-02 00:45:49,366 [ scc.merge] INFO Merged PRs: 2025-05-02 00:45:49,366 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2025-05-02 00:45:49,366 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2025-05-02 00:45:49,366 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2025-05-02 00:45:49,366 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method' 2025-05-02 00:45:49,366 [ scc.merge] INFO - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' 2025-05-02 00:45:49,366 [ scc.merge] INFO 2025-05-02 00:45:49,366 [ scc.merge] INFO Repository: ome/omero-scripts 2025-05-02 00:45:49,366 [ scc.merge] INFO Excluded PRs: 2025-05-02 00:45:49,366 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-05-02 00:45:49,366 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-05-02 00:45:49,366 [ scc.merge] INFO Already up to date. 2025-05-02 00:45:49,366 [ scc.merge] INFO 2025-05-02 00:45:49,366 [ scc.merge] INFO Merged PRs: 2025-05-02 00:45:49,366 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-05-02 00:45:49,366 [ scc.merge] INFO 2025-05-02 00:45:49,366 [ scc.merge] INFO Conflicting PRs (not included): 2025-05-02 00:45:49,366 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-05-02 00:45:49,366 [ scc.merge] INFO 2025-05-02 00:45:49,366 [ scc.merge] INFO Repository: ome/omero-web 2025-05-02 00:45:49,366 [ scc.merge] INFO Excluded PRs: 2025-05-02 00:45:49,366 [ scc.merge] INFO - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-05-02 00:45:49,367 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2025-05-02 00:45:49,367 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) 2025-05-02 00:45:49,367 [ scc.merge] INFO Already up to date. 2025-05-02 00:45:49,367 [ scc.merge] INFO 2025-05-02 00:45:49,367 [ scc.merge] INFO Merged PRs: 2025-05-02 00:45:49,367 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2025-05-02 00:45:49,367 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-05-02 00:45:49,367 [ scc.merge] INFO - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-05-02 00:45:49,367 [ scc.merge] INFO - PR 596 sukunis 'Linkify can parse anchor tag' 2025-05-02 00:45:49,367 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations' 2025-05-02 00:45:49,367 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf' 2025-05-02 00:45:49,367 [ scc.merge] INFO - PR 606 knabar 'Fix issues related to images with very high channel count' 2025-05-02 00:45:49,367 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-05-02 00:45:49,367 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display' 2025-05-02 00:45:49,367 [ scc.merge] INFO - PR 614 sbesson 'CodeQL workflow updates' 2025-05-02 00:45:49,367 [ scc.merge] INFO - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-05-02 00:45:49,367 [ scc.merge] INFO 2025-05-02 00:45:49,367 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-05-02 00:45:49,367 [ scc.git] DEBUG Calling 'git remote' 2025-05-02 00:45:49,371 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-05-02 00:45:49,372 [ scc.git] DEBUG Calling 'git remote' 2025-05-02 00:45:49,376 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-02 00:45:49,377 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-05-02 00:45:49,377 [ scc.git] DEBUG Calling 'git remote' 2025-05-02 00:45:49,381 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-02 00:45:49,381 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-05-02 00:45:49,381 [ scc.git] DEBUG Calling 'git remote' 2025-05-02 00:45:49,385 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-02 00:45:49,385 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-05-02 00:45:49,386 [ scc.git] DEBUG Calling 'git remote' 2025-05-02 00:45:49,389 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-02 00:45:49,389 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-05-02 00:45:49,389 [ scc.git] DEBUG Calling 'git remote' 2025-05-02 00:45:49,393 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from 01fa0c5 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from 6d44f66 nothing to commit, working tree clean Entering 'omero-py' HEAD detached from e485be49 nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 950b28b nothing to commit, working tree clean Entering 'omero-web' HEAD detached from 4b979f847 nothing to commit, working tree clean HEAD detached from 155f8de nothing to commit, working tree clean 2025-05-02 00:46:20,600 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS