![[Jenkins]](/jenkins/static/f2c3e7bc/images/svgs/logo.svg){kind=logo}
Started by upstream project "Trigger" build number 459 originally caused by: Started by timer [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-python-superbuild-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.39.2' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-python-superbuild-push/workspace@libs/3527f795de077758b82663f7b48798100750860c75e4099522d51863b08dc748/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.39.2' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 155f8de84051621b91200b6b3617c057b622fad4 (refs/remotes/origin/master) Commit message: "Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4" > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-python-superbuild-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-python-superbuild.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-python-superbuild.git > git --version # timeout=10 > git --version # 'git version 2.43.5' > git fetch --tags --force --progress -- https://github.com/ome/omero-python-superbuild.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 155f8de84051621b91200b6b3617c057b622fad4 # timeout=10 > git rev-list --no-walk 155f8de84051621b91200b6b3617c057b622fad4 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-py.url # timeout=10 > git config -f .gitmodules --get submodule.omero-py.path # timeout=10 > git config --get submodule.omero-web.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web.path # timeout=10 > git config --get submodule.omero-marshal.url # timeout=10 > git config -f .gitmodules --get submodule.omero-marshal.path # timeout=10 > git config --get submodule.omero-dropbox.url # timeout=10 > git config -f .gitmodules --get submodule.omero-dropbox.path # timeout=10 > git config --get submodule.omero-scripts.url # timeout=10 > git config -f .gitmodules --get submodule.omero-scripts.path # timeout=10 > git submodule update --init --recursive omero-py # timeout=10 > git submodule update --init --recursive omero-web # timeout=10 > git submodule update --init --recursive omero-marshal # timeout=10 > git submodule update --init --recursive omero-dropbox # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 414 [Pipeline] sh + pushd build ~/workspace/OMERO-python-superbuild-push/build ~/workspace/OMERO-python-superbuild-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-python-superbuild-push + python3.11 -m venv build/venv > git submodule update --init --recursive omero-scripts # timeout=10 + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-25.1.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-25.1.1 WARNING: There was an error checking the latest version of pip. + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached PyGithub-2.6.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.1 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel.yaml-0.18.10-py3-none-any.whl.metadata (23 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl.metadata (8.6 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.32.3-py3-none-any.whl.metadata (4.6 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached PyJWT-2.10.1-py3-none-any.whl.metadata (4.0 kB) Collecting typing-extensions>=4.0.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.13.2-py3-none-any.whl.metadata (3.0 kB) Collecting Deprecated (from PyGithub>=1.54->scc) Using cached Deprecated-1.2.18-py2.py3-none-any.whl.metadata (5.7 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-44.0.3-cp39-abi3-manylinux_2_34_x86_64.whl.metadata (5.7 kB) Collecting cffi>=1.12 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (1.5 kB) Collecting pycparser (from cffi>=1.12->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-2.22-py3-none-any.whl.metadata (943 bytes) Collecting charset-normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (35 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.10-py3-none-any.whl.metadata (10 kB) Collecting certifi>=2017.4.17 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2025.4.26-py3-none-any.whl.metadata (2.5 kB) Collecting wrapt<2,>=1.10 (from Deprecated->PyGithub>=1.54->scc) Using cached wrapt-1.17.2-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (6.4 kB) Collecting ruamel.yaml.clib>=0.2.7 (from ruamel.yaml->scc) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl.metadata (2.7 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached PyGithub-2.6.1-py3-none-any.whl (410 kB) Using cached PyJWT-2.10.1-py3-none-any.whl (22 kB) Using cached cryptography-44.0.3-cp39-abi3-manylinux_2_34_x86_64.whl (4.2 MB) Using cached cffi-1.17.1-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (467 kB) Using cached PyNaCl-1.5.0-cp36-abi3-manylinux_2_17_x86_64.manylinux2014_x86_64.manylinux_2_24_x86_64.whl (856 kB) Using cached PyYAML-6.0.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (762 kB) Using cached requests-2.32.3-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.2-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (147 kB) Using cached idna-3.10-py3-none-any.whl (70 kB) Using cached certifi-2025.4.26-py3-none-any.whl (159 kB) Using cached typing_extensions-4.13.2-py3-none-any.whl (45 kB) Using cached Deprecated-1.2.18-py2.py3-none-any.whl (10.0 kB) Using cached wrapt-1.17.2-cp311-cp311-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (83 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-2.22-py3-none-any.whl (117 kB) Using cached ruamel.yaml-0.18.10-py3-none-any.whl (117 kB) Using cached ruamel.yaml.clib-0.2.12-cp311-cp311-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (739 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: wrapt, urllib3, typing-extensions, six, ruamel.yaml.clib, PyYAML, pyjwt, pycparser, idna, future, charset-normalizer, certifi, yaclifw, ruamel.yaml, requests, Deprecated, cffi, ruamel.yaml.jinja2, pynacl, cryptography, PyGithub, scc Successfully installed Deprecated-1.2.18 PyGithub-2.6.1 PyYAML-6.0.2 certifi-2025.4.26 cffi-1.17.1 charset-normalizer-3.4.2 cryptography-44.0.3 future-1.0.0 idna-3.10 pycparser-2.22 pyjwt-2.10.1 pynacl-1.5.0 requests-2.32.3 ruamel.yaml-0.18.10 ruamel.yaml.clib-0.2.12 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.13.2 urllib3-1.26.20 wrapt-1.17.2 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-python-superbuild.git + BASE_REPO=omero-python-superbuild.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-python-superbuild-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-python-superbuild-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-python-superbuild-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2025-05-03 00:45:19,048 [ scc.config] DEBUG Found github.token 2025-05-03 00:45:19,049 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:19,232 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-03 00:45:19,484 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:19,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-03 00:45:19,919 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:20,080 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-05-03 00:45:20,081 [ scc.gh] DEBUG 4424 remaining from 5000 (Reset at 00:05 2025-05-03 00:45:20,081 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-05-03 00:45:20,084 [ scc.git] DEBUG Check current status 2025-05-03 00:45:20,084 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-03 00:45:20,086 [ scc.git] DEBUG 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4 2025-05-03 00:45:20,086 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-03 00:45:20,128 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-05-03 00:45:20,131 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-05-03 00:45:20,141 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49) 2025-05-03 00:45:20,146 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-05-03 00:45:20,150 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-05-03 00:45:20,152 [ scc.config] DEBUG Found remote.origin.url 2025-05-03 00:45:20,332 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:20,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-05-03 00:45:20,833 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:21,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-05-03 00:45:21,325 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:21,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-05-03 00:45:21,789 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:21,982 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-05-03 00:45:22,234 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:22,412 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-05-03 00:45:22,413 [ scc.git] DEBUG Resetting... 2025-05-03 00:45:22,413 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-05-03 00:45:22,418 [ scc.git] DEBUG HEAD is now at 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4 2025-05-03 00:45:22,418 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-05-03 00:45:22,473 [ scc.git] DEBUG Check current status 2025-05-03 00:45:22,473 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-03 00:45:22,475 [ scc.git] DEBUG 155f8de Merge pull request #319 from ome/dependabot/submodules/omero-py-e485be4 2025-05-03 00:45:22,476 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-03 00:45:22,516 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-05-03 00:45:22,519 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-05-03 00:45:22,528 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49) 2025-05-03 00:45:22,532 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-05-03 00:45:22,537 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-05-03 00:45:22,538 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-05-03 00:45:22,538 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-05-03 00:45:22,538 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-05-03 00:45:22,538 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-05-03 00:45:22,538 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-05-03 00:45:22,538 [ scc.repo] DEBUG ## PRs found: 2025-05-03 00:45:22,664 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:22,862 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2025-05-03 00:45:22,862 [ scc.repo] DEBUG ## Branches found: 2025-05-03 00:45:22,862 [ scc.git] DEBUG Get sha1 of %s 2025-05-03 00:45:22,862 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:45:22,864 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-05-03 00:45:22,867 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-05-03 00:45:22,867 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-05-03 00:45:22,869 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-05-03 00:45:22,872 [ scc.git] DEBUG Already up to date. 2025-05-03 00:45:22,872 [ scc.git] DEBUG ## Unique users: [] 2025-05-03 00:45:22,872 [ scc.git] DEBUG Get sha1 of %s 2025-05-03 00:45:22,872 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:45:22,874 [ scc.git] DEBUG Calling 'git submodule update' 2025-05-03 00:45:22,914 [ scc.git] DEBUG Get sha1 of %s 2025-05-03 00:45:22,914 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:45:22,916 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-05-03 00:45:22,951 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f1cbb7f0650> has no local changes 2025-05-03 00:45:22,951 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-python-superbuild Already up to date. Generated by OMERO-python-superbuild-push#394 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/394/)' 2025-05-03 00:45:22,976 [ scc.git] DEBUG [detached HEAD 1b56a75] merge master -Dorg -Snone 2025-05-03 00:45:22,976 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-05-03 00:45:22,976 [ scc.merge] INFO Already up to date. 2025-05-03 00:45:22,976 [ scc.merge] INFO 2025-05-03 00:45:22,976 [ scc.merge] INFO 2025-05-03 00:45:22,976 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-05-03 00:45:22,976 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'omero-dropbox' Synchronizing submodule url for 'omero-marshal' Synchronizing submodule url for 'omero-py' Synchronizing submodule url for 'omero-scripts' Synchronizing submodule url for 'omero-web' Merge all submodules using repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-05-03 00:45:24,909 [ scc.config] DEBUG Found github.token 2025-05-03 00:45:24,910 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:25,070 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-03 00:45:25,322 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:25,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-03 00:45:25,747 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:25,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2025-05-03 00:45:25,909 [ scc.gh] DEBUG 4416 remaining from 5000 (Reset at 00:05 2025-05-03 00:45:25,910 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-05-03 00:45:25,912 [ scc.git] DEBUG Check current status 2025-05-03 00:45:25,912 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-03 00:45:25,915 [ scc.git] DEBUG 1b56a75 merge master -Dorg -Snone 2025-05-03 00:45:25,915 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-03 00:45:25,956 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-05-03 00:45:25,959 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-05-03 00:45:25,969 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49) 2025-05-03 00:45:25,974 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-05-03 00:45:25,978 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-05-03 00:45:25,981 [ scc.config] DEBUG Found remote.origin.url 2025-05-03 00:45:25,981 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2025-05-03 00:45:25,982 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-scripts: base-branch: develop 2025-05-03 00:45:26,160 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:26,418 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild HTTP/1.1" 200 None 2025-05-03 00:45:26,670 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:26,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-05-03 00:45:27,147 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:27,334 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-05-03 00:45:27,586 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:27,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-05-03 00:45:28,039 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:28,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-05-03 00:45:28,222 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-03 00:45:28,270 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-05-03 00:45:28,270 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-05-03 00:45:28,273 [ scc.git] DEBUG Check current status 2025-05-03 00:45:28,273 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-03 00:45:28,276 [ scc.git] DEBUG 01fa0c5 Merge pull request #24 from jburel/build 2025-05-03 00:45:28,276 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-03 00:45:28,316 [ scc.config] DEBUG Found remote.origin.url 2025-05-03 00:45:28,473 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:28,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox HTTP/1.1" 200 None 2025-05-03 00:45:29,009 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:29,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-05-03 00:45:29,491 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:29,686 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-05-03 00:45:29,938 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:30,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-05-03 00:45:30,379 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:30,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-05-03 00:45:30,561 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-03 00:45:30,600 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-03 00:45:30,600 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-05-03 00:45:30,600 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-05-03 00:45:30,603 [ scc.git] DEBUG Check current status 2025-05-03 00:45:30,603 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-03 00:45:30,605 [ scc.git] DEBUG 6d44f66 Merge pull request #82 from jburel/build 2025-05-03 00:45:30,605 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-03 00:45:30,644 [ scc.config] DEBUG Found remote.origin.url 2025-05-03 00:45:30,812 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:31,137 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal HTTP/1.1" 200 None 2025-05-03 00:45:31,388 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:31,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-05-03 00:45:31,879 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:32,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-05-03 00:45:32,305 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:32,479 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-05-03 00:45:32,731 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:32,904 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-05-03 00:45:32,905 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-03 00:45:32,944 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-03 00:45:32,945 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-05-03 00:45:32,945 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-05-03 00:45:32,947 [ scc.git] DEBUG Check current status 2025-05-03 00:45:32,947 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-03 00:45:32,950 [ scc.git] DEBUG e485be49 Merge pull request #427 from Rdornier/mirror-java-download 2025-05-03 00:45:32,950 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-03 00:45:32,989 [ scc.config] DEBUG Found remote.origin.url 2025-05-03 00:45:33,156 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:33,435 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py HTTP/1.1" 200 None 2025-05-03 00:45:33,686 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:33,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-05-03 00:45:34,153 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:34,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-05-03 00:45:34,606 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:34,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-05-03 00:45:35,038 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:35,211 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-05-03 00:45:35,212 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-03 00:45:35,251 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-03 00:45:35,252 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-05-03 00:45:35,252 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-05-03 00:45:35,254 [ scc.git] DEBUG Check current status 2025-05-03 00:45:35,254 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-03 00:45:35,256 [ scc.git] DEBUG 950b28b Merge pull request #225 from will-moore/test_fixes 2025-05-03 00:45:35,257 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-03 00:45:35,295 [ scc.config] DEBUG Found remote.origin.url 2025-05-03 00:45:35,295 [ scc.git] DEBUG Repository configuration: base-branch: develop 2025-05-03 00:45:35,463 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:35,714 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts HTTP/1.1" 200 None 2025-05-03 00:45:35,965 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:36,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-05-03 00:45:36,459 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:36,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-05-03 00:45:36,885 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:37,076 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-05-03 00:45:37,328 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:37,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-05-03 00:45:37,500 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-03 00:45:37,540 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-03 00:45:37,541 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-05-03 00:45:37,541 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2025-05-03 00:45:37,543 [ scc.git] DEBUG Check current status 2025-05-03 00:45:37,543 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-03 00:45:37,546 [ scc.git] DEBUG 4b979f847 Bump version: 5.29.0 → 5.29.1.dev0 2025-05-03 00:45:37,546 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-03 00:45:37,586 [ scc.config] DEBUG Found remote.origin.url 2025-05-03 00:45:37,751 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:38,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web HTTP/1.1" 200 None 2025-05-03 00:45:38,349 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:38,605 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2025-05-03 00:45:38,856 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:39,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2025-05-03 00:45:39,294 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:39,483 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2025-05-03 00:45:39,734 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:39,928 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2025-05-03 00:45:39,929 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-03 00:45:39,968 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-03 00:45:39,968 [ scc.git] DEBUG Resetting... 2025-05-03 00:45:39,968 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2025-05-03 00:45:39,973 [ scc.git] DEBUG HEAD is now at 1b56a75 merge master -Dorg -Snone 2025-05-03 00:45:39,974 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2025-05-03 00:45:40,029 [ scc.git] DEBUG Check current status 2025-05-03 00:45:40,029 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2025-05-03 00:45:40,031 [ scc.git] DEBUG 1b56a75 merge master -Dorg -Snone 2025-05-03 00:45:40,032 [ scc.git] DEBUG Calling 'git submodule status' 2025-05-03 00:45:40,073 [ scc.git] DEBUG 01fa0c567e5391e5f920bd17d6e9eab210c9df67 omero-dropbox (v5.7.0-7-g01fa0c5) 2025-05-03 00:45:40,077 [ scc.git] DEBUG 6d44f663b2c9680b027c29da4e98430e03403bb1 omero-marshal (v0.9.0-13-g6d44f66) 2025-05-03 00:45:40,086 [ scc.git] DEBUG e485be49bf7cba61f34dd030161831d8d8b66285 omero-py (v5.20.0-8-ge485be49) 2025-05-03 00:45:40,090 [ scc.git] DEBUG 950b28b31e228ae7b317cbd159235faf4023e4dc omero-scripts (v5.9.0-6-g950b28b) 2025-05-03 00:45:40,094 [ scc.git] DEBUG 4b979f847a45a13ead11e7b39705ec1656376fbc omero-web (v5.29.0-1-g4b979f847) 2025-05-03 00:45:40,095 [ scc.merge] INFO Merging Pull Request(s) based on master 2025-05-03 00:45:40,095 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2025-05-03 00:45:40,095 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2025-05-03 00:45:40,095 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2025-05-03 00:45:40,095 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2025-05-03 00:45:40,095 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2025-05-03 00:45:40,095 [ scc.repo] DEBUG ## PRs found: 2025-05-03 00:45:40,180 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:40,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-python-superbuild/pulls HTTP/1.1" 200 2 2025-05-03 00:45:40,372 [ scc.repo] DEBUG ## Branches found: 2025-05-03 00:45:40,373 [ scc.git] DEBUG Get sha1 of %s 2025-05-03 00:45:40,373 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:45:40,375 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-05-03 00:45:40,377 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-05-03 00:45:40,377 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-05-03 00:45:40,379 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-05-03 00:45:40,382 [ scc.git] DEBUG Already up to date. 2025-05-03 00:45:40,382 [ scc.git] DEBUG ## Unique users: [] 2025-05-03 00:45:40,382 [ scc.git] DEBUG Get sha1 of %s 2025-05-03 00:45:40,382 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:45:40,384 [ scc.git] DEBUG Calling 'git submodule update' 2025-05-03 00:45:40,428 [ scc.git] DEBUG Get sha1 of %s 2025-05-03 00:45:40,428 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:45:40,430 [ scc.repo] DEBUG ## PRs found: 2025-05-03 00:45:40,623 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:40,898 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/pulls HTTP/1.1" 200 None 2025-05-03 00:45:41,150 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:41,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16 HTTP/1.1" 200 None 2025-05-03 00:45:41,628 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:41,868 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/issues/16/comments HTTP/1.1" 200 None 2025-05-03 00:45:42,119 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:42,442 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-05-03 00:45:42,694 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:42,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-03 00:45:43,169 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:43,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/commits/f802993eba0b6514d0e31f0f7d5b996ffb54b452 HTTP/1.1" 200 None 2025-05-03 00:45:43,719 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:43,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-dropbox/statuses/f802993eba0b6514d0e31f0f7d5b996ffb54b452?per_page=1 HTTP/1.1" 200 2 2025-05-03 00:45:43,911 [ scc.repo] DEBUG - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-05-03 00:45:43,911 [ scc.repo] DEBUG ## Branches found: 2025-05-03 00:45:43,911 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-05-03 00:45:43,911 [ scc.git] DEBUG Get sha1 of %s 2025-05-03 00:45:43,911 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:45:43,914 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-05-03 00:45:43,916 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-05-03 00:45:43,916 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-05-03 00:45:43,919 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-05-03 00:45:43,922 [ scc.git] DEBUG Already up to date. 2025-05-03 00:45:43,922 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2025-05-03 00:45:44,256 [ scc.git] DEBUG From https://github.com/ome/omero-dropbox 2025-05-03 00:45:44,256 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2025-05-03 00:45:44,260 [ scc.git] DEBUG ## Unique users: [] 2025-05-03 00:45:44,260 [ scc.git] DEBUG Get sha1 of %s 2025-05-03 00:45:44,260 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:45:44,262 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-05-03 00:45:44,266 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:45:44,268 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Review all instances of whitelist/blacklist) f802993eba0b6514d0e31f0f7d5b996ffb54b452' 2025-05-03 00:45:44,281 [ scc.git] DEBUG Auto-merging src/fsAbstractPlatformMonitor.py 2025-05-03 00:45:44,282 [ scc.git] DEBUG Auto-merging src/fsDirectory.py 2025-05-03 00:45:44,282 [ scc.git] DEBUG Auto-merging src/fsDropBox.py 2025-05-03 00:45:44,282 [ scc.git] DEBUG Auto-merging src/fsLists.py 2025-05-03 00:45:44,282 [ scc.git] DEBUG Auto-merging src/fsMac-10-5-Monitor.py 2025-05-03 00:45:44,282 [ scc.git] DEBUG Auto-merging src/fsMonitor.py 2025-05-03 00:45:44,282 [ scc.git] DEBUG Auto-merging src/fsMonitorServer.py 2025-05-03 00:45:44,282 [ scc.git] DEBUG Auto-merging src/fsPyinotifyMonitor.py 2025-05-03 00:45:44,282 [ scc.git] DEBUG Auto-merging src/fsWin-XP-Monitor.py 2025-05-03 00:45:44,283 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-03 00:45:44,286 [ scc.git] DEBUG src/fsAbstractPlatformMonitor.py | 6 +++--- 2025-05-03 00:45:44,286 [ scc.git] DEBUG src/fsDirectory.py | 46 ++++++++++++++++++++-------------------- 2025-05-03 00:45:44,287 [ scc.git] DEBUG src/fsDropBox.py | 24 ++++++++++----------- 2025-05-03 00:45:44,287 [ scc.git] DEBUG src/fsLists.py | 14 ++++++------ 2025-05-03 00:45:44,287 [ scc.git] DEBUG src/fsMac-10-5-Monitor.py | 10 ++++----- 2025-05-03 00:45:44,287 [ scc.git] DEBUG src/fsMonitor.py | 24 ++++++++++----------- 2025-05-03 00:45:44,287 [ scc.git] DEBUG src/fsMonitorServer.py | 10 ++++----- 2025-05-03 00:45:44,287 [ scc.git] DEBUG src/fsPyinotifyMonitor.py | 8 +++---- 2025-05-03 00:45:44,287 [ scc.git] DEBUG src/fsWin-XP-Monitor.py | 20 ++++++++--------- 2025-05-03 00:45:44,287 [ scc.git] DEBUG 9 files changed, 81 insertions(+), 81 deletions(-) 2025-05-03 00:45:44,288 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:44,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-03 00:45:44,461 [ scc.git] DEBUG Calling 'git submodule update' 2025-05-03 00:45:44,501 [ scc.git] DEBUG Get sha1 of %s 2025-05-03 00:45:44,501 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:45:44,503 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-03 00:45:44,541 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-05-03 00:45:44,545 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6e293c2610> has no local changes 2025-05-03 00:45:44,545 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Generated by OMERO-python-superbuild-push#394 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/394/)' 2025-05-03 00:45:44,553 [ scc.git] DEBUG [detached HEAD ec20c0d] merge master -Dorg -Ssuccess-only 2025-05-03 00:45:44,554 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-03 00:45:44,554 [ scc.repo] DEBUG ## PRs found: 2025-05-03 00:45:44,712 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:45,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/pulls HTTP/1.1" 200 None 2025-05-03 00:45:45,274 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:45,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84 HTTP/1.1" 200 None 2025-05-03 00:45:45,801 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:46,024 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/84/comments HTTP/1.1" 200 None 2025-05-03 00:45:46,275 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:46,511 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69 HTTP/1.1" 200 None 2025-05-03 00:45:46,763 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:46,970 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/69/comments HTTP/1.1" 200 None 2025-05-03 00:45:47,222 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:47,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-05-03 00:45:47,724 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:47,918 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-03 00:45:48,170 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:48,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/commits/1cbe0bebb081ffedb835c966ecb434d33502ceca HTTP/1.1" 200 None 2025-05-03 00:45:48,729 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:48,921 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/statuses/1cbe0bebb081ffedb835c966ecb434d33502ceca?per_page=1 HTTP/1.1" 200 2 2025-05-03 00:45:48,922 [ scc.repo] DEBUG - PR 69 will-moore 'Roi encoder allows Shape None' 2025-05-03 00:45:49,173 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:49,400 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34 HTTP/1.1" 200 None 2025-05-03 00:45:49,651 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:49,867 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/34/comments HTTP/1.1" 200 None 2025-05-03 00:45:50,119 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:50,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33 HTTP/1.1" 200 None 2025-05-03 00:45:50,631 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:50,846 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-marshal/issues/33/comments HTTP/1.1" 200 None 2025-05-03 00:45:50,847 [ scc.repo] DEBUG ## Branches found: 2025-05-03 00:45:50,847 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-05-03 00:45:50,847 [ scc.git] DEBUG Get sha1 of %s 2025-05-03 00:45:50,847 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:45:50,850 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-05-03 00:45:50,853 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-05-03 00:45:50,853 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-05-03 00:45:50,856 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-05-03 00:45:50,859 [ scc.git] DEBUG Already up to date. 2025-05-03 00:45:50,859 [ scc.git] DEBUG Calling 'git fetch origin pull/69/head' 2025-05-03 00:45:51,153 [ scc.git] DEBUG From https://github.com/ome/omero-marshal 2025-05-03 00:45:51,153 [ scc.git] DEBUG * branch refs/pull/69/head -> FETCH_HEAD 2025-05-03 00:45:51,157 [ scc.git] DEBUG ## Unique users: [] 2025-05-03 00:45:51,158 [ scc.git] DEBUG Get sha1 of %s 2025-05-03 00:45:51,158 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:45:51,160 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-05-03 00:45:51,164 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:45:51,166 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 69 (Roi encoder allows Shape None) 1cbe0bebb081ffedb835c966ecb434d33502ceca' 2025-05-03 00:45:51,175 [ scc.git] DEBUG Auto-merging tests/unit/conftest.py 2025-05-03 00:45:51,176 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-03 00:45:51,179 [ scc.git] DEBUG omero_marshal/encode/encoders/roi.py | 5 +++-- 2025-05-03 00:45:51,179 [ scc.git] DEBUG tests/unit/conftest.py | 5 ++++- 2025-05-03 00:45:51,179 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 3 deletions(-) 2025-05-03 00:45:51,181 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:51,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-03 00:45:51,348 [ scc.git] DEBUG Calling 'git submodule update' 2025-05-03 00:45:51,387 [ scc.git] DEBUG Get sha1 of %s 2025-05-03 00:45:51,387 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:45:51,389 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-03 00:45:51,427 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-05-03 00:45:51,431 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6e2836b710> has no local changes 2025-05-03 00:45:51,431 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Generated by OMERO-python-superbuild-push#394 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/394/)' 2025-05-03 00:45:51,438 [ scc.git] DEBUG [detached HEAD 8d951a3] merge master -Dorg -Ssuccess-only 2025-05-03 00:45:51,438 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-03 00:45:51,438 [ scc.repo] DEBUG ## PRs found: 2025-05-03 00:45:51,599 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:52,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/pulls HTTP/1.1" 200 None 2025-05-03 00:45:52,278 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:52,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/459 HTTP/1.1" 200 None 2025-05-03 00:45:52,792 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:53,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/453 HTTP/1.1" 200 None 2025-05-03 00:45:53,269 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:53,568 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/453/comments HTTP/1.1" 200 None 2025-05-03 00:45:53,820 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:54,084 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab HTTP/1.1" 200 None 2025-05-03 00:45:54,335 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:54,596 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-03 00:45:54,848 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:55,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-03 00:45:55,365 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:55,627 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab HTTP/1.1" 200 None 2025-05-03 00:45:55,879 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:56,645 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/ff9ad445b6af7725ab17a39185630b8919e42bab?per_page=1 HTTP/1.1" 200 None 2025-05-03 00:45:56,896 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:57,107 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab HTTP/1.1" 200 None 2025-05-03 00:45:57,358 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:57,567 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/ff9ad445b6af7725ab17a39185630b8919e42bab/status HTTP/1.1" 200 None 2025-05-03 00:45:57,568 [ scc.repo] DEBUG - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' 2025-05-03 00:45:57,819 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:58,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/450 HTTP/1.1" 200 None 2025-05-03 00:45:58,303 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:58,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443 HTTP/1.1" 200 None 2025-05-03 00:45:58,808 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:59,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/443/comments HTTP/1.1" 200 None 2025-05-03 00:45:59,388 [ scc.repo] DEBUG # ... Exclude label: exclude 2025-05-03 00:45:59,638 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:45:59,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408 HTTP/1.1" 200 None 2025-05-03 00:46:00,098 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:00,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/408/comments HTTP/1.1" 200 None 2025-05-03 00:46:00,561 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:00,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-05-03 00:46:01,109 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:01,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-03 00:46:01,613 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:01,832 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-03 00:46:02,084 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:02,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-05-03 00:46:02,607 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:02,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/5b69af339bf34bd4adcf16a7f6a03fafa2921804?per_page=1 HTTP/1.1" 200 None 2025-05-03 00:46:03,076 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:03,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804 HTTP/1.1" 200 None 2025-05-03 00:46:03,527 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:03,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/5b69af339bf34bd4adcf16a7f6a03fafa2921804/status HTTP/1.1" 200 None 2025-05-03 00:46:03,721 [ scc.repo] DEBUG - PR 408 jburel 'remove deprecated method' 2025-05-03 00:46:03,972 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:04,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396 HTTP/1.1" 200 None 2025-05-03 00:46:04,486 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:04,701 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/396/comments HTTP/1.1" 200 None 2025-05-03 00:46:04,952 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:05,218 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573 HTTP/1.1" 200 None 2025-05-03 00:46:05,469 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:05,706 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-03 00:46:05,958 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:06,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c2cf271ef27269131408acb10c7cc1ecaefb0573/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-03 00:46:06,436 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:06,661 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391 HTTP/1.1" 200 None 2025-05-03 00:46:06,913 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:07,146 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/391/comments HTTP/1.1" 200 None 2025-05-03 00:46:07,397 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:07,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-05-03 00:46:07,893 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:08,115 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-03 00:46:08,366 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:08,611 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/20da2ca68fa40df47b5436887597e9804098f023 HTTP/1.1" 200 None 2025-05-03 00:46:08,862 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:09,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/20da2ca68fa40df47b5436887597e9804098f023?per_page=1 HTTP/1.1" 200 2 2025-05-03 00:46:09,036 [ scc.repo] DEBUG - PR 391 joshmoore 'Add jstack command' 2025-05-03 00:46:09,287 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:09,561 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332 HTTP/1.1" 200 None 2025-05-03 00:46:09,812 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:10,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/332/comments HTTP/1.1" 200 None 2025-05-03 00:46:10,340 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:10,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-05-03 00:46:10,867 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:11,124 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-03 00:46:11,376 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:11,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/c427fcd99373ad6c0c2d28d322827d0523ba7afc HTTP/1.1" 200 None 2025-05-03 00:46:11,917 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:12,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/c427fcd99373ad6c0c2d28d322827d0523ba7afc?per_page=1 HTTP/1.1" 200 2 2025-05-03 00:46:12,100 [ scc.repo] DEBUG - PR 332 jburel 'Build conda' 2025-05-03 00:46:12,351 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:12,588 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299 HTTP/1.1" 200 None 2025-05-03 00:46:12,840 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:13,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/299/comments HTTP/1.1" 200 None 2025-05-03 00:46:13,371 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:13,589 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199 HTTP/1.1" 200 None 2025-05-03 00:46:13,840 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:14,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/issues/199/comments HTTP/1.1" 200 None 2025-05-03 00:46:14,382 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:14,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-05-03 00:46:14,909 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:15,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-03 00:46:15,371 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:15,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/commits/d9df94bbff36ef1f943c9ab1995cd60831e572ec HTTP/1.1" 200 None 2025-05-03 00:46:15,900 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:16,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-py/statuses/d9df94bbff36ef1f943c9ab1995cd60831e572ec?per_page=1 HTTP/1.1" 200 2 2025-05-03 00:46:16,093 [ scc.repo] DEBUG - PR 199 joshmoore 'user: allow setting default group' 2025-05-03 00:46:16,093 [ scc.repo] DEBUG ## Branches found: 2025-05-03 00:46:16,093 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-05-03 00:46:16,093 [ scc.git] DEBUG Get sha1 of %s 2025-05-03 00:46:16,094 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:46:16,096 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-05-03 00:46:16,099 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-05-03 00:46:16,099 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-05-03 00:46:16,102 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-05-03 00:46:16,105 [ scc.git] DEBUG Already up to date. 2025-05-03 00:46:16,105 [ scc.git] DEBUG Calling 'git fetch origin pull/199/head' 2025-05-03 00:46:16,429 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-05-03 00:46:16,429 [ scc.git] DEBUG * branch refs/pull/199/head -> FETCH_HEAD 2025-05-03 00:46:16,433 [ scc.git] DEBUG Calling 'git fetch origin pull/332/head' 2025-05-03 00:46:16,726 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-05-03 00:46:16,726 [ scc.git] DEBUG * branch refs/pull/332/head -> FETCH_HEAD 2025-05-03 00:46:16,731 [ scc.git] DEBUG Calling 'git fetch origin pull/391/head' 2025-05-03 00:46:17,017 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-05-03 00:46:17,018 [ scc.git] DEBUG * branch refs/pull/391/head -> FETCH_HEAD 2025-05-03 00:46:17,022 [ scc.git] DEBUG Calling 'git fetch origin pull/408/head' 2025-05-03 00:46:17,307 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-05-03 00:46:17,307 [ scc.git] DEBUG * branch refs/pull/408/head -> FETCH_HEAD 2025-05-03 00:46:17,311 [ scc.git] DEBUG Calling 'git fetch origin pull/453/head' 2025-05-03 00:46:17,584 [ scc.git] DEBUG From https://github.com/ome/omero-py 2025-05-03 00:46:17,584 [ scc.git] DEBUG * branch refs/pull/453/head -> FETCH_HEAD 2025-05-03 00:46:17,588 [ scc.git] DEBUG ## Unique users: [] 2025-05-03 00:46:17,588 [ scc.git] DEBUG Get sha1 of %s 2025-05-03 00:46:17,588 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:46:17,590 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-05-03 00:46:17,603 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:46:17,605 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 199 (user: allow setting default group) d9df94bbff36ef1f943c9ab1995cd60831e572ec' 2025-05-03 00:46:17,627 [ scc.git] DEBUG Auto-merging src/omero/cli.py 2025-05-03 00:46:17,627 [ scc.git] DEBUG Auto-merging src/omero/plugins/user.py 2025-05-03 00:46:17,629 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-03 00:46:17,633 [ scc.git] DEBUG src/omero/cli.py | 6 ++++++ 2025-05-03 00:46:17,633 [ scc.git] DEBUG src/omero/plugins/user.py | 36 +++++++++++++++++++++++++++++++++--- 2025-05-03 00:46:17,633 [ scc.git] DEBUG 2 files changed, 39 insertions(+), 3 deletions(-) 2025-05-03 00:46:17,634 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:17,797 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-03 00:46:17,798 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-05-03 00:46:17,810 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:46:17,813 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 332 (Build conda) c427fcd99373ad6c0c2d28d322827d0523ba7afc' 2025-05-03 00:46:17,833 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-03 00:46:17,836 [ scc.git] DEBUG .github/workflows/install.yml | 37 +++++++++++++++++++++++++++++++++++++ 2025-05-03 00:46:17,836 [ scc.git] DEBUG connect.py | 11 +++++++++++ 2025-05-03 00:46:17,836 [ scc.git] DEBUG 2 files changed, 48 insertions(+) 2025-05-03 00:46:17,836 [ scc.git] DEBUG create mode 100644 .github/workflows/install.yml 2025-05-03 00:46:17,836 [ scc.git] DEBUG create mode 100644 connect.py 2025-05-03 00:46:18,049 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:18,216 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-03 00:46:18,216 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...20da2ca68fa40df47b5436887597e9804098f023' 2025-05-03 00:46:18,229 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:46:18,232 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 391 (Add jstack command) 20da2ca68fa40df47b5436887597e9804098f023' 2025-05-03 00:46:18,254 [ scc.git] DEBUG Auto-merging src/omero/plugins/admin.py 2025-05-03 00:46:18,256 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-03 00:46:18,259 [ scc.git] DEBUG src/omero/plugins/admin.py | 61 ++++++++++++++++++++++++++++++++++++++++++++-- 2025-05-03 00:46:18,260 [ scc.git] DEBUG 1 file changed, 59 insertions(+), 2 deletions(-) 2025-05-03 00:46:18,467 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:18,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-03 00:46:18,630 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-05-03 00:46:18,643 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:46:18,645 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 408 (remove deprecated method) 5b69af339bf34bd4adcf16a7f6a03fafa2921804' 2025-05-03 00:46:18,678 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-05-03 00:46:18,679 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-03 00:46:18,686 [ scc.git] DEBUG src/omero/gateway/__init__.py | 36 ------------------------------------ 2025-05-03 00:46:18,686 [ scc.git] DEBUG 1 file changed, 36 deletions(-) 2025-05-03 00:46:18,881 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:19,050 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-03 00:46:19,050 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ff9ad445b6af7725ab17a39185630b8919e42bab' 2025-05-03 00:46:19,064 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:46:19,066 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 453 (getObject() and getExternalInfo() load externalInfo) ff9ad445b6af7725ab17a39185630b8919e42bab' 2025-05-03 00:46:19,102 [ scc.git] DEBUG Auto-merging src/omero/gateway/__init__.py 2025-05-03 00:46:19,104 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-03 00:46:19,111 [ scc.git] DEBUG src/omero/gateway/__init__.py | 21 ++++++++++++++++++ 2025-05-03 00:46:19,111 [ scc.git] DEBUG src/omero/plugins/obj.py | 50 ++++++++++++++++++++++++++++++++++++++++++- 2025-05-03 00:46:19,111 [ scc.git] DEBUG 2 files changed, 70 insertions(+), 1 deletion(-) 2025-05-03 00:46:19,301 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:19,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-03 00:46:19,461 [ scc.git] DEBUG Calling 'git submodule update' 2025-05-03 00:46:19,500 [ scc.git] DEBUG Get sha1 of %s 2025-05-03 00:46:19,500 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:46:19,502 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-03 00:46:19,541 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-05-03 00:46:19,548 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6e28379c90> has no local changes 2025-05-03 00:46:19,548 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-py Excluded PRs: - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' Generated by OMERO-python-superbuild-push#394 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/394/)' 2025-05-03 00:46:19,557 [ scc.git] DEBUG [detached HEAD 2d892d04] merge master -Dorg -Ssuccess-only 2025-05-03 00:46:19,558 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-03 00:46:19,558 [ scc.git] INFO Overriding base-branch from master to develop 2025-05-03 00:46:19,558 [ scc.repo] DEBUG ## PRs found: 2025-05-03 00:46:19,712 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:20,016 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 None 2025-05-03 00:46:20,267 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:20,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223 HTTP/1.1" 200 None 2025-05-03 00:46:20,743 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:20,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/223/comments HTTP/1.1" 200 None 2025-05-03 00:46:21,215 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:21,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-05-03 00:46:21,732 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:21,983 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-03 00:46:22,234 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:22,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-03 00:46:22,753 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:22,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/d8b2bbd6f5066de883a41ba5338662d60472b0d8 HTTP/1.1" 200 None 2025-05-03 00:46:23,230 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:23,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/d8b2bbd6f5066de883a41ba5338662d60472b0d8?per_page=1 HTTP/1.1" 200 2 2025-05-03 00:46:23,404 [ scc.repo] DEBUG - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-05-03 00:46:23,655 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:23,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202 HTTP/1.1" 200 None 2025-05-03 00:46:24,148 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:24,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/202/comments HTTP/1.1" 200 None 2025-05-03 00:46:24,663 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:24,917 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-05-03 00:46:25,169 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:25,357 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-03 00:46:25,608 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:25,857 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/commits/1fd6030669613cdb8879cfe6395db8c820fdcf19 HTTP/1.1" 200 None 2025-05-03 00:46:26,109 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:26,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/statuses/1fd6030669613cdb8879cfe6395db8c820fdcf19?per_page=1 HTTP/1.1" 200 2 2025-05-03 00:46:26,288 [ scc.repo] DEBUG - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-05-03 00:46:26,539 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:26,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198 HTTP/1.1" 200 None 2025-05-03 00:46:27,023 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:27,321 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/198/comments HTTP/1.1" 200 None 2025-05-03 00:46:27,572 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:27,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103 HTTP/1.1" 200 None 2025-05-03 00:46:28,039 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:28,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/issues/103/comments HTTP/1.1" 200 None 2025-05-03 00:46:28,342 [ scc.repo] DEBUG ## Branches found: 2025-05-03 00:46:28,342 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-05-03 00:46:28,342 [ scc.git] DEBUG Get sha1 of %s 2025-05-03 00:46:28,342 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:46:28,345 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2025-05-03 00:46:28,348 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-05-03 00:46:28,348 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2025-05-03 00:46:28,351 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2025-05-03 00:46:28,354 [ scc.git] DEBUG Already up to date. 2025-05-03 00:46:28,354 [ scc.git] DEBUG Calling 'git fetch origin pull/202/head' 2025-05-03 00:46:28,677 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-05-03 00:46:28,677 [ scc.git] DEBUG * branch refs/pull/202/head -> FETCH_HEAD 2025-05-03 00:46:28,681 [ scc.git] DEBUG Calling 'git fetch origin pull/223/head' 2025-05-03 00:46:28,958 [ scc.git] DEBUG From https://github.com/ome/omero-scripts 2025-05-03 00:46:28,958 [ scc.git] DEBUG * branch refs/pull/223/head -> FETCH_HEAD 2025-05-03 00:46:28,962 [ scc.git] DEBUG ## Unique users: [] 2025-05-03 00:46:28,962 [ scc.git] DEBUG Get sha1 of %s 2025-05-03 00:46:28,962 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:46:28,965 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-05-03 00:46:28,970 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:46:28,973 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 202 (Add Plate support to KeyVal_to_csv.py) 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-05-03 00:46:28,983 [ scc.git] DEBUG CONFLICT (modify/delete): omero/annotation_scripts/KeyVal_to_csv.py deleted in HEAD and modified in 1fd6030669613cdb8879cfe6395db8c820fdcf19. Version 1fd6030669613cdb8879cfe6395db8c820fdcf19 of omero/annotation_scripts/KeyVal_to_csv.py left in tree. 2025-05-03 00:46:28,984 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2025-05-03 00:46:28,984 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2025-05-03 00:46:28,986 [ scc.git] DEBUG Calling 'git reset --hard 950b28b31e228ae7b317cbd159235faf4023e4dc' 2025-05-03 00:46:28,990 [ scc.git] DEBUG HEAD is now at 950b28b Merge pull request #225 from will-moore/test_fixes 2025-05-03 00:46:28,993 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:29,158 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-03 00:46:29,158 [ scc.git] DEBUG Calling 'git merge-base 950b28b31e228ae7b317cbd159235faf4023e4dc 1fd6030669613cdb8879cfe6395db8c820fdcf19' 2025-05-03 00:46:29,164 [ scc.git] DEBUG Calling 'git diff --name-only a90f59802f6752ad74badec5c0c1d6b0c9c43b15..950b28b31e228ae7b317cbd159235faf4023e4dc' 2025-05-03 00:46:29,168 [ scc.git] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Conflicting PR. Removed from build [OMERO-python-superbuild-push#394](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/394/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/394/consoleText) for more details. Possible conflicts: - Upstream changes - omero/annotation_scripts/KeyVal_to_csv.py --conflicts 2025-05-03 00:46:29,170 [ scc.config] DEBUG Found github.token 2025-05-03 00:46:29,170 [ scc.git] DEBUG Not adding comment to issue #202, already --conflicts. 2025-05-03 00:46:29,170 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-05-03 00:46:29,175 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:46:29,177 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 223 (don't attempt ROI stats on big images) d8b2bbd6f5066de883a41ba5338662d60472b0d8' 2025-05-03 00:46:29,187 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-03 00:46:29,190 [ scc.git] DEBUG omero/export_scripts/Batch_ROI_Export.py | 9 ++++++++- 2025-05-03 00:46:29,190 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 1 deletion(-) 2025-05-03 00:46:29,409 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:29,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-03 00:46:29,583 [ scc.git] DEBUG Calling 'git submodule update' 2025-05-03 00:46:29,622 [ scc.git] DEBUG Get sha1 of %s 2025-05-03 00:46:29,622 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:46:29,624 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-03 00:46:29,662 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-05-03 00:46:29,666 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6e2866a3d0> has no local changes 2025-05-03 00:46:29,666 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Generated by OMERO-python-superbuild-push#394 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/394/)' 2025-05-03 00:46:29,673 [ scc.git] DEBUG [detached HEAD b9c17bc] merge master -Dorg -Ssuccess-only 2025-05-03 00:46:29,673 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-03 00:46:29,674 [ scc.repo] DEBUG ## PRs found: 2025-05-03 00:46:29,834 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:30,276 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/pulls HTTP/1.1" 200 None 2025-05-03 00:46:30,541 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:30,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/617 HTTP/1.1" 200 None 2025-05-03 00:46:31,009 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:31,252 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/616 HTTP/1.1" 200 None 2025-05-03 00:46:31,504 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:31,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None 2025-05-03 00:46:32,016 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:32,267 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-03 00:46:32,518 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:32,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-03 00:46:32,991 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:33,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None 2025-05-03 00:46:33,446 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:33,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/c6401a8d78f907d300ef6a6bb673efa86374ecc4?per_page=1 HTTP/1.1" 200 None 2025-05-03 00:46:33,879 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:34,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4 HTTP/1.1" 200 None 2025-05-03 00:46:34,349 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:34,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/c6401a8d78f907d300ef6a6bb673efa86374ecc4/status HTTP/1.1" 200 None 2025-05-03 00:46:34,550 [ scc.repo] DEBUG - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-05-03 00:46:34,801 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:35,015 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/614 HTTP/1.1" 200 None 2025-05-03 00:46:35,267 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:35,485 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/614/comments HTTP/1.1" 200 None 2025-05-03 00:46:35,736 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:35,978 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-05-03 00:46:36,230 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:36,455 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-03 00:46:36,707 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:36,954 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-03 00:46:37,206 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:37,457 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-05-03 00:46:37,708 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:37,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/da14d11b161eb8aa90a6e4729758ea504d5914e3?per_page=1 HTTP/1.1" 200 None 2025-05-03 00:46:38,181 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:38,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3 HTTP/1.1" 200 None 2025-05-03 00:46:38,684 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:38,881 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/da14d11b161eb8aa90a6e4729758ea504d5914e3/status HTTP/1.1" 200 None 2025-05-03 00:46:38,881 [ scc.repo] DEBUG - PR 614 sbesson 'CodeQL workflow updates' 2025-05-03 00:46:39,132 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:39,346 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613 HTTP/1.1" 200 None 2025-05-03 00:46:39,597 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:39,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/613/comments HTTP/1.1" 200 None 2025-05-03 00:46:40,121 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:40,360 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d HTTP/1.1" 200 None 2025-05-03 00:46:40,611 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:40,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-03 00:46:41,097 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:41,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-03 00:46:41,615 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:41,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d HTTP/1.1" 200 None 2025-05-03 00:46:42,135 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:42,336 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/a8c190ba1c823672143ab90d77020d652e2c084d?per_page=1 HTTP/1.1" 200 None 2025-05-03 00:46:42,587 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:42,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d HTTP/1.1" 200 None 2025-05-03 00:46:43,043 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:43,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/a8c190ba1c823672143ab90d77020d652e2c084d/status HTTP/1.1" 200 None 2025-05-03 00:46:43,254 [ scc.repo] DEBUG - PR 613 will-moore 'externalInfo display' 2025-05-03 00:46:43,505 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:43,723 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612 HTTP/1.1" 200 None 2025-05-03 00:46:43,974 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:44,283 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/612/comments HTTP/1.1" 200 None 2025-05-03 00:46:44,535 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:44,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-05-03 00:46:45,038 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:45,314 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-03 00:46:45,566 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:45,821 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-03 00:46:46,072 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:46,384 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-05-03 00:46:46,636 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:46,841 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/06446bf912b361c22e46c5a0678b3146b91e7e26?per_page=1 HTTP/1.1" 200 None 2025-05-03 00:46:47,093 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:47,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26 HTTP/1.1" 200 None 2025-05-03 00:46:47,613 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:47,819 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06446bf912b361c22e46c5a0678b3146b91e7e26/status HTTP/1.1" 200 None 2025-05-03 00:46:47,819 [ scc.repo] DEBUG - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-05-03 00:46:48,070 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:48,280 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/606 HTTP/1.1" 200 None 2025-05-03 00:46:48,531 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:48,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/606/comments HTTP/1.1" 200 None 2025-05-03 00:46:48,978 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:49,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/4f6b0eb1c18c7ef1cc355f53ceaa354f18444a14 HTTP/1.1" 200 None 2025-05-03 00:46:49,518 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:49,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/4f6b0eb1c18c7ef1cc355f53ceaa354f18444a14/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-03 00:46:50,042 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:50,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/4f6b0eb1c18c7ef1cc355f53ceaa354f18444a14/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-03 00:46:50,544 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:50,814 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/4f6b0eb1c18c7ef1cc355f53ceaa354f18444a14 HTTP/1.1" 200 None 2025-05-03 00:46:51,066 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:51,265 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/4f6b0eb1c18c7ef1cc355f53ceaa354f18444a14?per_page=1 HTTP/1.1" 200 None 2025-05-03 00:46:51,517 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:51,716 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/4f6b0eb1c18c7ef1cc355f53ceaa354f18444a14 HTTP/1.1" 200 None 2025-05-03 00:46:51,967 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:52,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/4f6b0eb1c18c7ef1cc355f53ceaa354f18444a14/status HTTP/1.1" 200 None 2025-05-03 00:46:52,174 [ scc.repo] DEBUG - PR 606 knabar 'Fix issues related to images with very high channel count' 2025-05-03 00:46:52,425 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:52,655 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604 HTTP/1.1" 200 None 2025-05-03 00:46:52,907 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:53,162 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/604/comments HTTP/1.1" 200 None 2025-05-03 00:46:53,413 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:53,671 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-05-03 00:46:53,922 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:54,149 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-03 00:46:54,401 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:54,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-03 00:46:55,008 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:55,287 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-05-03 00:46:55,539 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:55,727 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/15e1289cb1c1533c8606b9c9f745d1f24575bb7d?per_page=1 HTTP/1.1" 200 None 2025-05-03 00:46:55,978 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:56,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d HTTP/1.1" 200 None 2025-05-03 00:46:56,447 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:56,647 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/15e1289cb1c1533c8606b9c9f745d1f24575bb7d/status HTTP/1.1" 200 None 2025-05-03 00:46:56,648 [ scc.repo] DEBUG - PR 604 will-moore 'Right panel perf' 2025-05-03 00:46:56,898 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:57,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/602 HTTP/1.1" 200 None 2025-05-03 00:46:57,403 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:57,680 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-05-03 00:46:57,932 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:58,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-03 00:46:58,442 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:58,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-03 00:46:58,963 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:59,153 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-05-03 00:46:59,404 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:46:59,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/9119372e9fef8cab0e212f02685c8715a3307539?per_page=1 HTTP/1.1" 200 None 2025-05-03 00:46:59,845 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:00,104 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539 HTTP/1.1" 200 None 2025-05-03 00:47:00,356 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:00,552 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/9119372e9fef8cab0e212f02685c8715a3307539/status HTTP/1.1" 200 None 2025-05-03 00:47:00,552 [ scc.repo] DEBUG - PR 602 Tom-TBT 'Inherit all annotations' 2025-05-03 00:47:00,803 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:01,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596 HTTP/1.1" 200 None 2025-05-03 00:47:01,292 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:01,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/596/comments HTTP/1.1" 200 None 2025-05-03 00:47:01,800 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:02,063 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-05-03 00:47:02,314 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:02,577 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-03 00:47:02,829 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:03,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-03 00:47:03,324 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:03,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-05-03 00:47:03,794 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:03,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/3aae48f586d7b412538a45b34ddc471a26a286e8?per_page=1 HTTP/1.1" 200 None 2025-05-03 00:47:04,242 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:04,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8 HTTP/1.1" 200 None 2025-05-03 00:47:04,711 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:04,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/3aae48f586d7b412538a45b34ddc471a26a286e8/status HTTP/1.1" 200 None 2025-05-03 00:47:04,908 [ scc.repo] DEBUG - PR 596 sukunis 'Linkify can parse anchor tag' 2025-05-03 00:47:05,159 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:05,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595 HTTP/1.1" 200 None 2025-05-03 00:47:05,656 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:05,875 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/595/comments HTTP/1.1" 200 None 2025-05-03 00:47:06,127 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:06,394 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-05-03 00:47:06,645 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:06,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-03 00:47:07,141 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:07,361 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-03 00:47:07,613 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:07,802 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-05-03 00:47:08,053 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:08,255 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/30278b64bb39134a3f1101b600d4a82256e6eaeb?per_page=1 HTTP/1.1" 200 None 2025-05-03 00:47:08,506 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:08,712 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb HTTP/1.1" 200 None 2025-05-03 00:47:08,964 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:09,174 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/30278b64bb39134a3f1101b600d4a82256e6eaeb/status HTTP/1.1" 200 None 2025-05-03 00:47:09,174 [ scc.repo] DEBUG - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-05-03 00:47:09,425 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:09,676 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535 HTTP/1.1" 200 None 2025-05-03 00:47:09,928 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:10,141 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/535/comments HTTP/1.1" 200 None 2025-05-03 00:47:10,393 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:10,637 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534 HTTP/1.1" 200 None 2025-05-03 00:47:10,888 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:11,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/534/comments HTTP/1.1" 200 None 2025-05-03 00:47:11,485 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:11,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-05-03 00:47:11,987 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:12,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-03 00:47:12,443 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:12,674 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005 HTTP/1.1" 200 None 2025-05-03 00:47:12,925 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:13,117 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/d328a0cbb5b49cd63929a8a6c6cf7a89a925d005?per_page=1 HTTP/1.1" 200 2 2025-05-03 00:47:13,117 [ scc.repo] DEBUG - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-05-03 00:47:13,368 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:13,592 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527 HTTP/1.1" 200 None 2025-05-03 00:47:13,843 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:14,116 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/527/comments HTTP/1.1" 200 None 2025-05-03 00:47:14,368 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:14,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-05-03 00:47:14,890 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:15,122 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-03 00:47:15,373 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:15,622 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/5565fa5d8fdefd1a406a9951f80779817ea35767 HTTP/1.1" 200 None 2025-05-03 00:47:15,873 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:16,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/statuses/5565fa5d8fdefd1a406a9951f80779817ea35767?per_page=1 HTTP/1.1" 200 2 2025-05-03 00:47:16,065 [ scc.repo] DEBUG - PR 527 will-moore 'Add some initial CSP settings to test' 2025-05-03 00:47:16,316 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:16,575 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168 HTTP/1.1" 200 None 2025-05-03 00:47:16,826 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:17,096 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/issues/168/comments HTTP/1.1" 200 None 2025-05-03 00:47:17,348 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:17,632 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200 HTTP/1.1" 200 None 2025-05-03 00:47:17,884 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:18,181 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2025-05-03 00:47:18,433 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:18,653 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web/commits/06b0073db19eeccb9698860f75639084ad1b1200/check-suites?app_id=15368 HTTP/1.1" 200 None 2025-05-03 00:47:18,654 [ scc.repo] DEBUG ## Branches found: 2025-05-03 00:47:18,654 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-05-03 00:47:18,655 [ scc.git] DEBUG Get sha1 of %s 2025-05-03 00:47:18,655 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:47:18,657 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2025-05-03 00:47:18,660 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2025-05-03 00:47:18,660 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2025-05-03 00:47:18,664 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2025-05-03 00:47:18,668 [ scc.git] DEBUG Already up to date. 2025-05-03 00:47:18,668 [ scc.git] DEBUG Calling 'git fetch origin pull/527/head' 2025-05-03 00:47:18,987 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-03 00:47:18,987 [ scc.git] DEBUG * branch refs/pull/527/head -> FETCH_HEAD 2025-05-03 00:47:18,991 [ scc.git] DEBUG Calling 'git fetch origin pull/534/head' 2025-05-03 00:47:19,284 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-03 00:47:19,284 [ scc.git] DEBUG * branch refs/pull/534/head -> FETCH_HEAD 2025-05-03 00:47:19,288 [ scc.git] DEBUG Calling 'git fetch origin pull/595/head' 2025-05-03 00:47:19,585 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-03 00:47:19,585 [ scc.git] DEBUG * branch refs/pull/595/head -> FETCH_HEAD 2025-05-03 00:47:19,589 [ scc.git] DEBUG Calling 'git fetch origin pull/596/head' 2025-05-03 00:47:19,879 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-03 00:47:19,879 [ scc.git] DEBUG * branch refs/pull/596/head -> FETCH_HEAD 2025-05-03 00:47:19,884 [ scc.git] DEBUG Calling 'git fetch origin pull/602/head' 2025-05-03 00:47:20,157 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-03 00:47:20,157 [ scc.git] DEBUG * branch refs/pull/602/head -> FETCH_HEAD 2025-05-03 00:47:20,161 [ scc.git] DEBUG Calling 'git fetch origin pull/604/head' 2025-05-03 00:47:20,438 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-03 00:47:20,438 [ scc.git] DEBUG * branch refs/pull/604/head -> FETCH_HEAD 2025-05-03 00:47:20,443 [ scc.git] DEBUG Calling 'git fetch origin pull/606/head' 2025-05-03 00:47:20,905 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-03 00:47:20,905 [ scc.git] DEBUG * branch refs/pull/606/head -> FETCH_HEAD 2025-05-03 00:47:20,908 [ scc.git] DEBUG Calling 'git fetch origin pull/612/head' 2025-05-03 00:47:21,172 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-03 00:47:21,172 [ scc.git] DEBUG * branch refs/pull/612/head -> FETCH_HEAD 2025-05-03 00:47:21,176 [ scc.git] DEBUG Calling 'git fetch origin pull/613/head' 2025-05-03 00:47:21,451 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-03 00:47:21,452 [ scc.git] DEBUG * branch refs/pull/613/head -> FETCH_HEAD 2025-05-03 00:47:21,456 [ scc.git] DEBUG Calling 'git fetch origin pull/614/head' 2025-05-03 00:47:21,760 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-03 00:47:21,761 [ scc.git] DEBUG * branch refs/pull/614/head -> FETCH_HEAD 2025-05-03 00:47:21,765 [ scc.git] DEBUG Calling 'git fetch origin pull/616/head' 2025-05-03 00:47:22,049 [ scc.git] DEBUG From https://github.com/ome/omero-web 2025-05-03 00:47:22,049 [ scc.git] DEBUG * branch refs/pull/616/head -> FETCH_HEAD 2025-05-03 00:47:22,053 [ scc.git] DEBUG ## Unique users: [] 2025-05-03 00:47:22,053 [ scc.git] DEBUG Get sha1 of %s 2025-05-03 00:47:22,053 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:47:22,055 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-05-03 00:47:22,063 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:47:22,066 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 527 (Add some initial CSP settings to test) 5565fa5d8fdefd1a406a9951f80779817ea35767' 2025-05-03 00:47:22,084 [ scc.git] DEBUG Auto-merging omeroweb/settings.py 2025-05-03 00:47:22,084 [ scc.git] DEBUG Auto-merging setup.py 2025-05-03 00:47:22,086 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-03 00:47:22,090 [ scc.git] DEBUG omeroweb/settings.py | 42 +++++++++++++++++++++++++++++++++++++++++- 2025-05-03 00:47:22,090 [ scc.git] DEBUG setup.py | 1 + 2025-05-03 00:47:22,090 [ scc.git] DEBUG 2 files changed, 42 insertions(+), 1 deletion(-) 2025-05-03 00:47:22,091 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:22,257 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-03 00:47:22,258 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-05-03 00:47:22,265 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:47:22,267 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 534 (get strings from omero.cmd.ERR and omero.CmdError correctly) d328a0cbb5b49cd63929a8a6c6cf7a89a925d005' 2025-05-03 00:47:22,289 [ scc.git] DEBUG Auto-merging omeroweb/webclient/webclient_gateway.py 2025-05-03 00:47:22,289 [ scc.git] DEBUG Auto-merging omeroweb/webgateway/marshal.py 2025-05-03 00:47:22,290 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-03 00:47:22,295 [ scc.git] DEBUG omeroweb/webclient/webclient_gateway.py | 2 +- 2025-05-03 00:47:22,295 [ scc.git] DEBUG omeroweb/webgateway/marshal.py | 4 ++-- 2025-05-03 00:47:22,295 [ scc.git] DEBUG 2 files changed, 3 insertions(+), 3 deletions(-) 2025-05-03 00:47:22,508 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:22,673 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-03 00:47:22,673 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-05-03 00:47:22,681 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:47:22,683 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 595 (linkify supports urls that include {}[] characters) 30278b64bb39134a3f1101b600d4a82256e6eaeb' 2025-05-03 00:47:22,704 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-03 00:47:22,708 [ scc.git] DEBUG omeroweb/webclient/static/webclient/javascript/ome.webclient.actions.js | 2 +- 2025-05-03 00:47:22,708 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-05-03 00:47:22,924 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:23,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-03 00:47:23,090 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-05-03 00:47:23,099 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:47:23,101 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 596 (Linkify can parse anchor tag) 3aae48f586d7b412538a45b34ddc471a26a286e8' 2025-05-03 00:47:23,123 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-03 00:47:23,127 [ scc.git] DEBUG .../webclient/javascript/ome.webclient.actions.js | 26 ++++++++++++++++++++-- 2025-05-03 00:47:23,127 [ scc.git] DEBUG 1 file changed, 24 insertions(+), 2 deletions(-) 2025-05-03 00:47:23,341 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:23,523 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-03 00:47:23,524 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...9119372e9fef8cab0e212f02685c8715a3307539' 2025-05-03 00:47:23,532 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:47:23,534 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 602 (Inherit all annotations) 9119372e9fef8cab0e212f02685c8715a3307539' 2025-05-03 00:47:23,555 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-03 00:47:23,560 [ scc.git] DEBUG omeroweb/webclient/static/webclient/css/dusty.css | 1 - 2025-05-03 00:47:23,560 [ scc.git] DEBUG .../javascript/ome.right_panel_comments_pane.js | 134 +++++++++++++++++++-- 2025-05-03 00:47:23,560 [ scc.git] DEBUG .../javascript/ome.right_panel_fileanns_pane.js | 80 +++++++++++- 2025-05-03 00:47:23,560 [ scc.git] DEBUG .../javascript/ome.right_panel_mapanns_pane.js | 6 +- 2025-05-03 00:47:23,560 [ scc.git] DEBUG .../javascript/ome.right_panel_ratings_pane.js | 33 ++++- 2025-05-03 00:47:23,560 [ scc.git] DEBUG .../javascript/ome.right_panel_tags_pane.js | 92 ++++++++++++-- 2025-05-03 00:47:23,561 [ scc.git] DEBUG .../webclient/annotations/comments_underscore.html | 58 +++++++-- 2025-05-03 00:47:23,561 [ scc.git] DEBUG .../webclient/annotations/fileanns_underscore.html | 81 ++++++++----- 2025-05-03 00:47:23,561 [ scc.git] DEBUG .../webclient/annotations/mapanns_underscore.html | 4 + 2025-05-03 00:47:23,561 [ scc.git] DEBUG .../webclient/annotations/ratings_underscore.html | 4 +- 2025-05-03 00:47:23,561 [ scc.git] DEBUG .../webclient/annotations/tags_underscore.html | 30 +++-- 2025-05-03 00:47:23,561 [ scc.git] DEBUG 11 files changed, 447 insertions(+), 76 deletions(-) 2025-05-03 00:47:23,775 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:23,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-03 00:47:23,985 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-05-03 00:47:23,994 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:47:23,996 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 604 (Right panel perf) 15e1289cb1c1533c8606b9c9f745d1f24575bb7d' 2025-05-03 00:47:24,024 [ scc.git] DEBUG Auto-merging omeroweb/webclient/views.py 2025-05-03 00:47:24,025 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-03 00:47:24,032 [ scc.git] DEBUG omeroweb/webclient/controller/container.py | 66 ++++++++++------------ 2025-05-03 00:47:24,032 [ scc.git] DEBUG .../webclient/annotations/annotations_share.html | 12 +--- 2025-05-03 00:47:24,032 [ scc.git] DEBUG omeroweb/webclient/views.py | 51 ----------------- 2025-05-03 00:47:24,032 [ scc.git] DEBUG 3 files changed, 31 insertions(+), 98 deletions(-) 2025-05-03 00:47:24,236 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:24,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-03 00:47:24,404 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4f6b0eb1c18c7ef1cc355f53ceaa354f18444a14' 2025-05-03 00:47:24,413 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:47:24,415 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 606 (Fix issues related to images with very high channel count) 4f6b0eb1c18c7ef1cc355f53ceaa354f18444a14' 2025-05-03 00:47:24,438 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-03 00:47:24,444 [ scc.git] DEBUG .../static/webgateway/js/ome.viewport.js | 17 ++++++++++-- 2025-05-03 00:47:24,444 [ scc.git] DEBUG omeroweb/webgateway/views.py | 32 ++++++++++++---------- 2025-05-03 00:47:24,444 [ scc.git] DEBUG 2 files changed, 32 insertions(+), 17 deletions(-) 2025-05-03 00:47:24,655 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:24,834 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-03 00:47:24,835 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-05-03 00:47:24,844 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:47:24,846 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 612 (Allow top_links to wrap if too many for space) 06446bf912b361c22e46c5a0678b3146b91e7e26' 2025-05-03 00:47:24,870 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-03 00:47:24,874 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.body.css | 2 ++ 2025-05-03 00:47:24,874 [ scc.git] DEBUG .../webgateway/static/webgateway/css/ome.header.css | 21 +++++++++++---------- 2025-05-03 00:47:24,874 [ scc.git] DEBUG 2 files changed, 13 insertions(+), 10 deletions(-) 2025-05-03 00:47:25,086 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:25,242 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-03 00:47:25,243 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...a8c190ba1c823672143ab90d77020d652e2c084d' 2025-05-03 00:47:25,252 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:47:25,254 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 613 (externalInfo display) a8c190ba1c823672143ab90d77020d652e2c084d' 2025-05-03 00:47:25,279 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-03 00:47:25,283 [ scc.git] DEBUG .../webclient/annotations/includes/toolbar.html | 42 ++++++++++++++++------ 2025-05-03 00:47:25,283 [ scc.git] DEBUG .../webclient/annotations/metadata_general.html | 38 ++++++++++++++------ 2025-05-03 00:47:25,283 [ scc.git] DEBUG 2 files changed, 60 insertions(+), 20 deletions(-) 2025-05-03 00:47:25,494 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:25,663 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-03 00:47:25,664 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...da14d11b161eb8aa90a6e4729758ea504d5914e3' 2025-05-03 00:47:25,672 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:47:25,674 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 614 (CodeQL workflow updates) da14d11b161eb8aa90a6e4729758ea504d5914e3' 2025-05-03 00:47:25,694 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-03 00:47:25,697 [ scc.git] DEBUG .github/workflows/codeql-analysis.yml | 55 +++++++---------------------------- 2025-05-03 00:47:25,697 [ scc.git] DEBUG 1 file changed, 11 insertions(+), 44 deletions(-) 2025-05-03 00:47:25,914 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:26,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-03 00:47:26,072 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c6401a8d78f907d300ef6a6bb673efa86374ecc4' 2025-05-03 00:47:26,081 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:47:26,083 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 616 (Use the release/v1 branch for the PyPA action publishing to PyPI) c6401a8d78f907d300ef6a6bb673efa86374ecc4' 2025-05-03 00:47:26,103 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2025-05-03 00:47:26,106 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2025-05-03 00:47:26,107 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2025-05-03 00:47:26,323 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:26,488 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-03 00:47:26,488 [ scc.git] DEBUG Calling 'git submodule update' 2025-05-03 00:47:26,528 [ scc.git] DEBUG Get sha1 of %s 2025-05-03 00:47:26,528 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2025-05-03 00:47:26,531 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-03 00:47:26,570 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-05-03 00:47:26,578 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6e283d2d10> has no local changes 2025-05-03 00:47:26,578 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web Excluded PRs: - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 606 knabar 'Fix issues related to images with very high channel count' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 614 sbesson 'CodeQL workflow updates' - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-python-superbuild-push#394 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/394/)' 2025-05-03 00:47:26,588 [ scc.git] DEBUG [detached HEAD 653a096c9] merge master -Dorg -Ssuccess-only 2025-05-03 00:47:26,588 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-03 00:47:26,588 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2025-05-03 00:47:26,635 [ scc.config] DEBUG Found submodule.omero-dropbox.url 2025-05-03 00:47:26,739 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:26,901 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-03 00:47:26,908 [ scc.config] DEBUG Found submodule.omero-marshal.url 2025-05-03 00:47:27,152 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:27,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-03 00:47:27,324 [ scc.config] DEBUG Found submodule.omero-py.url 2025-05-03 00:47:27,569 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:27,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-03 00:47:27,728 [ scc.config] DEBUG Found submodule.omero-scripts.url 2025-05-03 00:47:27,973 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:28,127 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-03 00:47:28,134 [ scc.config] DEBUG Found submodule.omero-web.url 2025-05-03 00:47:28,378 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2025-05-03 00:47:28,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2025-05-03 00:47:28,578 [ scc.git] DEBUG Calling 'git status --porcelain' 2025-05-03 00:47:28,610 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f6e2a0bd450> has local changes 2025-05-03 00:47:28,611 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-python-superbuild Already up to date. Repository: ome/omero-dropbox Already up to date. Merged PRs: - PR 16 joshmoore 'Review all instances of whitelist/blacklist' Repository: ome/omero-marshal Excluded PRs: - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) - PR 34 chris-allan 'Initial support for Event' (exclude comment) - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) Already up to date. Merged PRs: - PR 69 will-moore 'Roi encoder allows Shape None' Repository: ome/omero-py Excluded PRs: - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) - PR 450 multimeric 'Add model stubs' (user: multimeric) - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) Already up to date. Merged PRs: - PR 199 joshmoore 'user: allow setting default group' - PR 332 jburel 'Build conda' - PR 391 joshmoore 'Add jstack command' - PR 408 jburel 'remove deprecated method' - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' Repository: ome/omero-scripts Excluded PRs: - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) Already up to date. Merged PRs: - PR 223 will-moore 'don't attempt ROI stats on big images' Conflicting PRs (not included): - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' Repository: ome/omero-web Excluded PRs: - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 535 will-moore 'Initial working browser history' (stage: draft) - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) Already up to date. Merged PRs: - PR 527 will-moore 'Add some initial CSP settings to test' - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' - PR 595 sukunis 'linkify supports urls that include {}[] characters' - PR 596 sukunis 'Linkify can parse anchor tag' - PR 602 Tom-TBT 'Inherit all annotations' - PR 604 will-moore 'Right panel perf' - PR 606 knabar 'Fix issues related to images with very high channel count' - PR 612 will-moore 'Allow top_links to wrap if too many for space' - PR 613 will-moore 'externalInfo display' - PR 614 sbesson 'CodeQL workflow updates' - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-python-superbuild-push#394 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-python-superbuild-push/394/)' 2025-05-03 00:47:28,619 [ scc.git] DEBUG [detached HEAD bc05912] merge master -Dorg -Ssuccess-only 2025-05-03 00:47:28,619 [ scc.git] DEBUG 6 files changed, 10 insertions(+), 10 deletions(-) 2025-05-03 00:47:28,619 [ scc.merge] INFO Repository: ome/omero-python-superbuild 2025-05-03 00:47:28,619 [ scc.merge] INFO Already up to date. 2025-05-03 00:47:28,619 [ scc.merge] INFO 2025-05-03 00:47:28,619 [ scc.merge] INFO 2025-05-03 00:47:28,619 [ scc.merge] INFO Repository: ome/omero-dropbox 2025-05-03 00:47:28,619 [ scc.merge] INFO Already up to date. 2025-05-03 00:47:28,619 [ scc.merge] INFO 2025-05-03 00:47:28,619 [ scc.merge] INFO Merged PRs: 2025-05-03 00:47:28,619 [ scc.merge] INFO - PR 16 joshmoore 'Review all instances of whitelist/blacklist' 2025-05-03 00:47:28,619 [ scc.merge] INFO 2025-05-03 00:47:28,619 [ scc.merge] INFO Repository: ome/omero-marshal 2025-05-03 00:47:28,619 [ scc.merge] INFO Excluded PRs: 2025-05-03 00:47:28,619 [ scc.merge] INFO - PR 84 joshmoore 'New JSON-LD context-based version' (stage: draft) 2025-05-03 00:47:28,619 [ scc.merge] INFO - PR 34 chris-allan 'Initial support for Event' (exclude comment) 2025-05-03 00:47:28,619 [ scc.merge] INFO - PR 33 chris-allan 'Encode/Decode Experimenters with ExperimenterGroup' (exclude comment) 2025-05-03 00:47:28,620 [ scc.merge] INFO Already up to date. 2025-05-03 00:47:28,620 [ scc.merge] INFO 2025-05-03 00:47:28,620 [ scc.merge] INFO Merged PRs: 2025-05-03 00:47:28,620 [ scc.merge] INFO - PR 69 will-moore 'Roi encoder allows Shape None' 2025-05-03 00:47:28,620 [ scc.merge] INFO 2025-05-03 00:47:28,620 [ scc.merge] INFO Repository: ome/omero-py 2025-05-03 00:47:28,620 [ scc.merge] INFO Excluded PRs: 2025-05-03 00:47:28,620 [ scc.merge] INFO - PR 459 Tom-TBT 'Wrapper improvements for ROIs' (stage: draft) 2025-05-03 00:47:28,620 [ scc.merge] INFO - PR 450 multimeric 'Add model stubs' (user: multimeric) 2025-05-03 00:47:28,620 [ scc.merge] INFO - PR 443 sbesson 'Gateway tests: remove logic downloading public DV files for testing' (label: exclude) 2025-05-03 00:47:28,620 [ scc.merge] INFO - PR 396 joshmoore 'Config property for passing environment variables (see #395)' (status: failure) 2025-05-03 00:47:28,620 [ scc.merge] INFO - PR 299 joshmoore 'Add parents and children to omero obj' (exclude comment) 2025-05-03 00:47:28,620 [ scc.merge] INFO Already up to date. 2025-05-03 00:47:28,620 [ scc.merge] INFO 2025-05-03 00:47:28,620 [ scc.merge] INFO Merged PRs: 2025-05-03 00:47:28,620 [ scc.merge] INFO - PR 199 joshmoore 'user: allow setting default group' 2025-05-03 00:47:28,620 [ scc.merge] INFO - PR 332 jburel 'Build conda' 2025-05-03 00:47:28,620 [ scc.merge] INFO - PR 391 joshmoore 'Add jstack command' 2025-05-03 00:47:28,620 [ scc.merge] INFO - PR 408 jburel 'remove deprecated method' 2025-05-03 00:47:28,620 [ scc.merge] INFO - PR 453 will-moore 'getObject() and getExternalInfo() load externalInfo' 2025-05-03 00:47:28,620 [ scc.merge] INFO 2025-05-03 00:47:28,620 [ scc.merge] INFO Repository: ome/omero-scripts 2025-05-03 00:47:28,620 [ scc.merge] INFO Excluded PRs: 2025-05-03 00:47:28,620 [ scc.merge] INFO - PR 198 JulianHn 'Adding Support for different CSV Encodings in Import_Scripts/Populate_Metadata.py' (user: JulianHn) 2025-05-03 00:47:28,620 [ scc.merge] INFO - PR 103 joshmoore 'Script for calculating min/max' (exclude comment) 2025-05-03 00:47:28,620 [ scc.merge] INFO Already up to date. 2025-05-03 00:47:28,620 [ scc.merge] INFO 2025-05-03 00:47:28,620 [ scc.merge] INFO Merged PRs: 2025-05-03 00:47:28,620 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2025-05-03 00:47:28,620 [ scc.merge] INFO 2025-05-03 00:47:28,620 [ scc.merge] INFO Conflicting PRs (not included): 2025-05-03 00:47:28,620 [ scc.merge] INFO - PR 202 will-moore 'Add Plate support to KeyVal_to_csv.py' 2025-05-03 00:47:28,620 [ scc.merge] INFO 2025-05-03 00:47:28,620 [ scc.merge] INFO Repository: ome/omero-web 2025-05-03 00:47:28,620 [ scc.merge] INFO Excluded PRs: 2025-05-03 00:47:28,620 [ scc.merge] INFO - PR 617 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2025-05-03 00:47:28,620 [ scc.merge] INFO - PR 535 will-moore 'Initial working browser history' (stage: draft) 2025-05-03 00:47:28,620 [ scc.merge] INFO - PR 168 stick 'Changes to nginx @maintenance handler' (status: failure) 2025-05-03 00:47:28,621 [ scc.merge] INFO Already up to date. 2025-05-03 00:47:28,621 [ scc.merge] INFO 2025-05-03 00:47:28,621 [ scc.merge] INFO Merged PRs: 2025-05-03 00:47:28,621 [ scc.merge] INFO - PR 527 will-moore 'Add some initial CSP settings to test' 2025-05-03 00:47:28,621 [ scc.merge] INFO - PR 534 will-moore 'get strings from omero.cmd.ERR and omero.CmdError correctly' 2025-05-03 00:47:28,621 [ scc.merge] INFO - PR 595 sukunis 'linkify supports urls that include {}[] characters' 2025-05-03 00:47:28,621 [ scc.merge] INFO - PR 596 sukunis 'Linkify can parse anchor tag' 2025-05-03 00:47:28,621 [ scc.merge] INFO - PR 602 Tom-TBT 'Inherit all annotations' 2025-05-03 00:47:28,621 [ scc.merge] INFO - PR 604 will-moore 'Right panel perf' 2025-05-03 00:47:28,621 [ scc.merge] INFO - PR 606 knabar 'Fix issues related to images with very high channel count' 2025-05-03 00:47:28,621 [ scc.merge] INFO - PR 612 will-moore 'Allow top_links to wrap if too many for space' 2025-05-03 00:47:28,621 [ scc.merge] INFO - PR 613 will-moore 'externalInfo display' 2025-05-03 00:47:28,621 [ scc.merge] INFO - PR 614 sbesson 'CodeQL workflow updates' 2025-05-03 00:47:28,621 [ scc.merge] INFO - PR 616 sbesson 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2025-05-03 00:47:28,621 [ scc.merge] INFO 2025-05-03 00:47:28,621 [ scc.merge] DEBUG Cleaning remote branches created for merging 2025-05-03 00:47:28,621 [ scc.git] DEBUG Calling 'git remote' 2025-05-03 00:47:28,623 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-dropbox 2025-05-03 00:47:28,623 [ scc.git] DEBUG Calling 'git remote' 2025-05-03 00:47:28,625 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-03 00:47:28,625 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-marshal 2025-05-03 00:47:28,626 [ scc.git] DEBUG Calling 'git remote' 2025-05-03 00:47:28,628 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-03 00:47:28,628 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-py 2025-05-03 00:47:28,628 [ scc.git] DEBUG Calling 'git remote' 2025-05-03 00:47:28,630 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-03 00:47:28,630 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-scripts 2025-05-03 00:47:28,630 [ scc.git] DEBUG Calling 'git remote' 2025-05-03 00:47:28,632 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push 2025-05-03 00:47:28,632 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push/omero-web 2025-05-03 00:47:28,632 [ scc.git] DEBUG Calling 'git remote' 2025-05-03 00:47:28,634 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-python-superbuild-push Update component versions Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found Downloading https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-build-build/lastSuccessfulBuild/artifact/omero-blitz/build/distributions/omero-blitz-5.8.1-python.zip ... Traceback (most recent call last): File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 150, in <module> download_blitz_target() File "/home/omero/workspace/OMERO-python-superbuild-push/omero-py/setup.py", line 83, in download_blitz_target resp = urlopen(loc) ^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 216, in urlopen return opener.open(url, data, timeout) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 525, in open response = meth(req, response) ^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 634, in http_response response = self.parent.error( ^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 563, in error return self._call_chain(*args) ^^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 496, in _call_chain result = func(*args) ^^^^^^^^^^^ File "/usr/lib64/python3.11/urllib/request.py", line 643, in http_error_default raise HTTPError(req.full_url, code, msg, hdrs, fp) urllib.error.HTTPError: HTTP Error 404: Not Found grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Commit all component version changes Entering 'omero-dropbox' Entering 'omero-marshal' Entering 'omero-py' Entering 'omero-scripts' Entering 'omero-web' Entering 'omero-dropbox' HEAD detached from 01fa0c5 nothing to commit, working tree clean Entering 'omero-marshal' HEAD detached from 6d44f66 nothing to commit, working tree clean Entering 'omero-py' HEAD detached from e485be49 nothing to commit, working tree clean Entering 'omero-scripts' HEAD detached from 950b28b nothing to commit, working tree clean Entering 'omero-web' HEAD detached from 4b979f847 nothing to commit, working tree clean HEAD detached from 155f8de nothing to commit, working tree clean 2025-05-03 00:47:57,566 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-python-superbuild/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS