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#15 386.4 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/doxia/doxia-decoration-model/1.4/doxia-decoration-model-1.4.jar
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#15 386.4 Downloading from central: https://repo.maven.apache.org/maven2/org/apache/maven/shared/maven-dependency-analyzer/1.10/maven-dependency-analyzer-1.10.jar
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#15 386.6 [[1;34mINFO[m] Configured Artifact: org.openmicroscopy:ome-xml:6.6.1-SNAPSHOT:jar
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#15 386.6 [[1;34mINFO[m] Configured Artifact: ome:formats-gpl:sources:8.6.0-SNAPSHOT:jar
#15 386.6 [[1;34mINFO[m] Configured Artifact: ome:bio-formats-examples:sources:8.6.0-SNAPSHOT:jar
#15 386.6 [[1;34mINFO[m] Unpacking /bio-formats-build/ome-model/ome-xml/target/ome-xml-6.6.1-SNAPSHOT.jar to /bio-formats-build/bio-formats-documentation/target/unpacked/ome-xml with includes "" and excludes ""
#15 386.7 [[1;34mINFO[m] Unpacking /bio-formats-build/bioformats/components/formats-api/target/formats-api-8.6.0-SNAPSHOT-sources.jar to /bio-formats-build/bio-formats-documentation/target/unpacked/source/formats-api with includes "" and excludes ""
#15 386.8 [[1;34mINFO[m] Unpacking /bio-formats-build/bioformats/components/formats-bsd/target/formats-bsd-8.6.0-SNAPSHOT-sources.jar to /bio-formats-build/bio-formats-documentation/target/unpacked/source/formats-bsd with includes "" and excludes ""
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#15 387.7 [[1;34mINFO[m] Changes detected - recompiling the module!
#15 387.7 [[1;34mINFO[m] Compiling 11 source files to /bio-formats-build/bio-formats-documentation/target/classes
#15 388.1 [[1;34mINFO[m] /bio-formats-build/bio-formats-documentation/src/main/java/MetaSupportList.java: /bio-formats-build/bio-formats-documentation/src/main/java/MetaSupportList.java uses or overrides a deprecated API.
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#15 388.2 Parsing AFIReader
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#15 388.3 [[1;34mINFO[m]
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#15 388.7 WARNING: A restricted method in java.lang.System has been called
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#15 388.7 WARNING: Use --enable-native-access=ALL-UNNAMED to avoid a warning for callers in this module
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#15 388.7
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#15 389.1 2026-07-06 14:54:04,826 [FormatPageAutogen.main()] WARN org.apache.velocity.deprecation - configuration key 'class.resource.loader.class' has been deprecated in favor of 'resource.loader.class.class'
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#15 390.5 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/NDPISReader.rst: done.
#15 390.5 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/NRRDReader.rst: done.
#15 390.5 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/NiftiReader.rst: done.
#15 390.5 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/NikonElementsTiffReader.rst: done.
#15 390.5 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/NikonReader.rst: done.
#15 390.5 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/NikonTiffReader.rst: done.
#15 390.5 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/OBFReader.rst: done.
#15 390.5 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/OIRReader.rst: done.
#15 390.5 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/OMETiffReader.rst: done.
#15 390.5 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/OMEXMLReader.rst: done.
#15 390.5 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/OlympusTileReader.rst: done.
#15 390.5 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/OpenlabRawReader.rst: done.
#15 390.5 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/OpenlabReader.rst: done.
#15 390.5 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/OperettaReader.rst: done.
#15 390.5 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/OxfordInstrumentsReader.rst: done.
#15 390.5 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/PCIReader.rst: done.
#15 390.5 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/PCORAWReader.rst: done.
#15 390.5 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/PCXReader.rst: done.
#15 390.5 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/PDSReader.rst: done.
#15 390.5 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/PGMReader.rst: done.
#15 390.5 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/PQBinReader.rst: done.
#15 390.5 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/PSDReader.rst: done.
#15 390.5 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/PerkinElmerReader.rst: done.
#15 390.5 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/PhotoshopTiffReader.rst: done.
#15 390.5 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/PictReader.rst: done.
#15 390.5 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/PovrayReader.rst: done.
#15 390.5 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/PrairieReader.rst: done.
#15 390.5 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/PyramidTiffReader.rst: done.
#15 390.5 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/QTReader.rst: done.
#15 390.5 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/QuesantReader.rst: done.
#15 390.5 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/RCPNLReader.rst: done.
#15 390.5 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/RHKReader.rst: done.
#15 390.5 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/SBIGReader.rst: done.
#15 390.5 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/SDTReader.rst: done.
#15 390.5 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/SEQReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/SIFReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/SISReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/SMCameraReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/SPCReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/SPEReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/SVSReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/ScanrReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/SeikoReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/SimplePCITiffReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/SlideBook7Reader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/SlidebookReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/SlidebookTiffReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/SpiderReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/TCSReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/TargaReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/TecanReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/TextReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/TiffDelegateReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/TiffJAIReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/TiffReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/TileJPEGReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/TillVisionReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/TissueFAXSReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/TopometrixReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/TrestleReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/UBMReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/UnisokuReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/VGSAMReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/VarianFDFReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/VectraReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/VeecoReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/VentanaReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/VisitechReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/VolocityClippingReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/VolocityReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/WATOPReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/XLEFReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/ZeissCZIReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/ZeissLMSReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/ZeissLSMReader.rst: done.
#15 390.6 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/ZeissTIFFReader.rst: done.
#15 390.7 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/ZeissXRMReader.rst: done.
#15 390.7 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/ZeissZVIReader.rst: done.
#15 390.7 Writing /bio-formats-build/bio-formats-documentation/target/sphinx/metadata/ZipReader.rst: done.
#15 390.7 [[1;34mINFO[m]
#15 390.7 [[1;34mINFO[m] [1m--- [0;32mmaven-resources-plugin:3.1.0:testResources[m [1m(default-testResources)[m @ [36mbio-formats-documentation[0;1m ---[m
#15 390.7 [[1;34mINFO[m] Using 'UTF-8' encoding to copy filtered resources.
#15 390.7 [[1;34mINFO[m] skip non existing resourceDirectory /bio-formats-build/bio-formats-documentation/src/test/resources
#15 390.7 [[1;34mINFO[m]
#15 390.7 [[1;34mINFO[m] [1m--- [0;32mmaven-compiler-plugin:3.7.0:testCompile[m [1m(default-testCompile)[m @ [36mbio-formats-documentation[0;1m ---[m
#15 390.7 [[1;34mINFO[m] No sources to compile
#15 390.7 [[1;34mINFO[m]
#15 390.7 [[1;34mINFO[m] [1m--- [0;32mmaven-surefire-plugin:2.22.0:test[m [1m(default-test)[m @ [36mbio-formats-documentation[0;1m ---[m
#15 390.7 [[1;34mINFO[m] No tests to run.
#15 390.7 [[1;34mINFO[m]
#15 390.7 [[1;34mINFO[m] [1m--- [0;32mmaven-jar-plugin:3.1.0:jar[m [1m(default-jar)[m @ [36mbio-formats-documentation[0;1m ---[m
#15 390.8 [[1;34mINFO[m] Bui
#15 390.8 [output clipped, log limit 2MiB reached]
#15 435.1 SLF4J: No SLF4J providers were found.
#15 435.1 SLF4J: Defaulting to no-operation (NOP) logger implementation
#15 435.1 SLF4J: See https://www.slf4j.org/codes.html#noProviders for further details.
#15 435.3 WARNING: A Java agent has been loaded dynamically (/home/build/.m2/repository/net/bytebuddy/byte-buddy-agent/1.10.19/byte-buddy-agent-1.10.19.jar)
#15 435.3 WARNING: If a serviceability tool is in use, please run with -XX:+EnableDynamicAgentLoading to hide this warning
#15 435.3 WARNING: If a serviceability tool is not in use, please run with -Djdk.instrument.traceUsage for more information
#15 435.3 WARNING: Dynamic loading of agents will be disallowed by default in a future release
#15 DONE 443.2s
#16 [12/14] WORKDIR /bio-formats-build/bioformats
#16 DONE 0.2s
#17 [13/14] RUN ant jars tools
#17 0.377 Buildfile: /bio-formats-build/bioformats/build.xml
#17 0.773 [echo] isSnapshot = true
#17 0.893
#17 0.893 copy-jars:
#17 0.893
#17 0.893 deps-formats-api:
#17 0.988 [echo] isSnapshot = true
#17 1.051
#17 1.051 install-pom:
#17 1.262 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.6.0-SNAPSHOT/pom-bio-formats-8.6.0-SNAPSHOT.pom
#17 1.275 [resolver:install] Installing ome:pom-bio-formats:8.6.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.6.0-SNAPSHOT/maven-metadata-local.xml
#17 1.279 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#17 1.281
#17 1.281 jar-formats-api:
#17 1.411 [echo] isSnapshot = true
#17 1.576
#17 1.576 init-title:
#17 1.577 [echo] ----------=========== formats-api ===========----------
#17 1.577
#17 1.577 init-timestamp:
#17 1.586
#17 1.586 init:
#17 1.586
#17 1.586 copy-resources:
#17 1.587 [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-api/build/classes
#17 1.604 [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-api/build/classes
#17 1.606
#17 1.606 compile:
#17 1.772 [resolver:resolve] Resolving artifacts
#17 1.799 [javac] Compiling 54 source files to /bio-formats-build/bioformats/components/formats-api/build/classes
#17 2.010 [javac] warning: [options] location of system modules is not set in conjunction with -source 11
#17 2.010 [javac] not setting the location of system modules may lead to class files that cannot run on JDK 11
#17 2.010 [javac] --release 11 is recommended instead of -source 11 -target 11 because it sets the location of system modules automatically
#17 3.011 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:150: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#17 3.011 [javac] int currentIndex = r.getCoreIndex();
#17 3.011 [javac] ^
#17 3.011 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:151: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#17 3.011 [javac] r.setCoreIndex(coreIndex);
#17 3.011 [javac] ^
#17 3.012 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/CoreMetadata.java:179: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#17 3.012 [javac] r.setCoreIndex(currentIndex);
#17 3.012 [javac] ^
#17 3.112 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1442: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#17 3.112 [javac] public void setCoreIndex(int no) {
#17 3.112 [javac] ^
#17 3.112 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1436: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#17 3.112 [javac] public int getCoreIndex() {
#17 3.112 [javac] ^
#17 3.112 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1362: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#17 3.112 [javac] public int coreIndexToSeries(int index)
#17 3.112 [javac] ^
#17 3.112 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1330: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#17 3.113 [javac] public int seriesToCoreIndex(int series)
#17 3.113 [javac] ^
#17 3.113 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatReader.java:1208: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 3.113 [javac] public List<CoreMetadata> getCoreMetadataList() {
#17 3.113 [javac] ^
#17 3.213 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:132: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#17 3.213 [javac] if (nativeReaderInitialized) nativeReader.setCoreIndex(no);
#17 3.213 [javac] ^
#17 3.213 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:133: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#17 3.213 [javac] if (legacyReaderInitialized) legacyReader.setCoreIndex(no);
#17 3.213 [javac] ^
#17 3.214 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:309: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 3.214 [javac] core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#17 3.214 [javac] ^
#17 3.214 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/DelegateReader.java:314: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 3.214 [javac] core = new ArrayList<CoreMetadata>(legacyReader.getCoreMetadataList());
#17 3.214 [javac] ^
#17 3.314 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:266: warning: [deprecation] URL(String) in URL has been deprecated
#17 3.314 [javac] Manifest manifest = new Manifest(new URL(manifestPath).openStream());
#17 3.314 [javac] ^
#17 3.415 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#17 3.415 [javac] ReflectedUniverse r = new ReflectedUniverse();
#17 3.415 [javac] ^
#17 3.415 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/FormatTools.java:1294: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#17 3.415 [javac] ReflectedUniverse r = new ReflectedUniverse();
#17 3.415 [javac] ^
#17 3.515 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:791: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#17 3.515 [javac] public void setCoreIndex(int no) {
#17 3.515 [javac] ^
#17 3.516 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:785: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#17 3.516 [javac] public int getCoreIndex() {
#17 3.516 [javac] ^
#17 3.516 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:801: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#17 3.516 [javac] public int coreIndexToSeries(int index) {
#17 3.516 [javac] ^
#17 3.516 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:796: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#17 3.516 [javac] public int seriesToCoreIndex(int series) {
#17 3.516 [javac] ^
#17 3.516 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:605: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 3.516 [javac] public List<CoreMetadata> getCoreMetadataList() {
#17 3.516 [javac] ^
#17 3.516 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:606: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 3.516 [javac] return getReader().getCoreMetadataList();
#17 3.517 [javac] ^
#17 3.517 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:786: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#17 3.517 [javac] return getReader().getCoreIndex();
#17 3.517 [javac] ^
#17 3.517 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:792: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#17 3.517 [javac] getReader().setCoreIndex(no);
#17 3.517 [javac] ^
#17 3.517 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:797: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#17 3.517 [javac] return getReader().seriesToCoreIndex(series);
#17 3.517 [javac] ^
#17 3.517 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ImageReader.java:802: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#17 3.517 [javac] return getReader().coreIndexToSeries(index);
#17 3.517 [javac] ^
#17 3.618 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:629: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#17 3.618 [javac] public void setCoreIndex(int no) {
#17 3.618 [javac] ^
#17 3.618 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:624: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#17 3.618 [javac] public int getCoreIndex() {
#17 3.618 [javac] ^
#17 3.618 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:639: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#17 3.618 [javac] public int coreIndexToSeries(int index) {
#17 3.618 [javac] ^
#17 3.618 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:634: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#17 3.618 [javac] public int seriesToCoreIndex(int series) {
#17 3.618 [javac] ^
#17 3.618 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:537: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 3.618 [javac] public List<CoreMetadata> getCoreMetadataList() {
#17 3.618 [javac] ^
#17 3.618 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:539: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 3.618 [javac] List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#17 3.618 [javac] ^
#17 3.619 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:625: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#17 3.619 [javac] return reader.getCoreIndex();
#17 3.619 [javac] ^
#17 3.619 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:630: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#17 3.619 [javac] reader.setCoreIndex(no);
#17 3.619 [javac] ^
#17 3.619 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:635: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#17 3.619 [javac] return reader.seriesToCoreIndex(series);
#17 3.619 [javac] ^
#17 3.619 [javac] /bio-formats-build/bioformats/components/formats-api/src/loci/formats/ReaderWrapper.java:640: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#17 3.619 [javac] return reader.coreIndexToSeries(index);
#17 3.619 [javac] ^
#17 3.820 [javac] Note: Some input files use unchecked or unsafe operations.
#17 3.820 [javac] Note: Recompile with -Xlint:unchecked for details.
#17 3.820 [javac] 36 warnings
#17 3.823
#17 3.823 formats-api.jar:
#17 3.823 [mkdir] Created dir: /bio-formats-build/bioformats/artifacts
#17 3.851 [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-api.jar
#17 3.889 [resolver:install] Using default POM (ome:formats-api:8.6.0-SNAPSHOT)
#17 3.892 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.6.0-SNAPSHOT/formats-api-8.6.0-SNAPSHOT.pom
#17 3.894 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.6.0-SNAPSHOT/formats-api-8.6.0-SNAPSHOT.jar
#17 3.895 [resolver:install] Installing ome:formats-api:8.6.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.6.0-SNAPSHOT/maven-metadata-local.xml
#17 3.897 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#17 3.898
#17 3.898 deps-turbojpeg:
#17 3.898
#17 3.898 jar-turbojpeg:
#17 4.009 [echo] isSnapshot = true
#17 4.162
#17 4.162 init-title:
#17 4.162 [echo] ----------=========== turbojpeg ===========----------
#17 4.162
#17 4.162 init-timestamp:
#17 4.162
#17 4.162 init:
#17 4.162
#17 4.162 copy-resources:
#17 4.163 [mkdir] Created dir: /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#17 4.164
#17 4.164 compile:
#17 4.173 [resolver:resolve] Resolving artifacts
#17 4.176 [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/forks/turbojpeg/build/classes
#17 4.379 [javac] warning: [options] location of system modules is not set in conjunction with -source 11
#17 4.379 [javac] not setting the location of system modules may lead to class files that cannot run on JDK 11
#17 4.379 [javac] --release 11 is recommended instead of -source 11 -target 11 because it sets the location of system modules automatically
#17 5.180 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:449: warning: [removal] finalize() in Object has been deprecated and marked for removal
#17 5.180 [javac] protected void finalize() throws Throwable {
#17 5.180 [javac] ^
#17 5.180 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJCompressor.java:455: warning: [removal] finalize() in Object has been deprecated and marked for removal
#17 5.180 [javac] super.finalize();
#17 5.180 [javac] ^
#17 5.180 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:504: warning: [removal] finalize() in Object has been deprecated and marked for removal
#17 5.180 [javac] protected void finalize() throws Throwable {
#17 5.180 [javac] ^
#17 5.180 [javac] /bio-formats-build/bioformats/components/forks/turbojpeg/src/org/libjpegturbo/turbojpeg/TJDecompressor.java:510: warning: [removal] finalize() in Object has been deprecated and marked for removal
#17 5.180 [javac] super.finalize();
#17 5.180 [javac] ^
#17 5.180 [javac] 5 warnings
#17 5.188
#17 5.188 jar:
#17 5.193 [jar] Building jar: /bio-formats-build/bioformats/artifacts/turbojpeg.jar
#17 5.380 [resolver:install] Using default POM (ome:turbojpeg:8.6.0-SNAPSHOT)
#17 5.388 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.6.0-SNAPSHOT/turbojpeg-8.6.0-SNAPSHOT.pom
#17 5.390 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.6.0-SNAPSHOT/turbojpeg-8.6.0-SNAPSHOT.jar
#17 5.392 [resolver:install] Installing ome:turbojpeg:8.6.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.6.0-SNAPSHOT/maven-metadata-local.xml
#17 5.396 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#17 5.397
#17 5.397 deps-formats-bsd:
#17 5.397
#17 5.397 jar-formats-bsd:
#17 5.530 [echo] isSnapshot = true
#17 5.680
#17 5.680 init-title:
#17 5.681 [echo] ----------=========== formats-bsd ===========----------
#17 5.681
#17 5.681 init-timestamp:
#17 5.681
#17 5.681 init:
#17 5.681
#17 5.681 copy-resources:
#17 5.682 [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-bsd/build/classes
#17 5.685 [copy] Copying 1 file to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#17 5.686
#17 5.686 compile:
#17 5.916 [resolver:resolve] Resolving artifacts
#17 5.942 [javac] Compiling 177 source files to /bio-formats-build/bioformats/components/formats-bsd/build/classes
#17 6.150 [javac] warning: [options] location of system modules is not set in conjunction with -source 11
#17 6.150 [javac] not setting the location of system modules may lead to class files that cannot run on JDK 11
#17 6.150 [javac] --release 11 is recommended instead of -source 11 -target 11 because it sets the location of system modules automatically
#17 7.852 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:297: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 7.852 [javac] core.size() != reader.getCoreMetadataList().size())
#17 7.852 [javac] ^
#17 7.852 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/DimensionSwapper.java:301: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 7.852 [javac] List<CoreMetadata> oldcore = reader.getCoreMetadataList();
#17 7.852 [javac] ^
#17 7.852 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:581: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 7.852 [javac] int n = reader.getCoreMetadataList().size();
#17 7.852 [javac] ^
#17 7.952 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:602: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#17 7.952 [javac] reader.setCoreIndex(coreIndex);
#17 7.952 [javac] ^
#17 7.952 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:609: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 7.952 [javac] int n = reader.getCoreMetadataList().size();
#17 7.953 [javac] ^
#17 7.953 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:620: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 7.953 [javac] int n = reader.getCoreMetadataList().size();
#17 7.953 [javac] ^
#17 7.953 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:621: warning: [deprecation] seriesToCoreIndex(int) in IFormatReader has been deprecated
#17 7.953 [javac] if (n > 1 || noStitch) return reader.seriesToCoreIndex(series);
#17 7.953 [javac] ^
#17 7.953 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:628: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 7.953 [javac] int n = reader.getCoreMetadataList().size();
#17 7.953 [javac] ^
#17 7.953 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:629: warning: [deprecation] coreIndexToSeries(int) in IFormatReader has been deprecated
#17 7.953 [javac] if (n > 1 || noStitch) return reader.coreIndexToSeries(index);
#17 7.953 [javac] ^
#17 7.953 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:637: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 7.953 [javac] int n = reader.getCoreMetadataList().size();
#17 7.953 [javac] ^
#17 7.953 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:638: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#17 7.953 [javac] if (n > 1 || noStitch) reader.setCoreIndex(no);
#17 7.953 [javac] ^
#17 7.953 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#17 7.953 [javac] return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#17 7.953 [javac] ^
#17 7.953 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:649: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#17 7.953 [javac] return reader.getCoreIndex() > 0 ? reader.getCoreIndex() : coreIndex;
#17 7.953 [javac] ^
#17 7.953 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:873: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 7.954 [javac] return noStitch ? reader.getCoreMetadataList() : core;
#17 7.954 [javac] ^
#17 7.954 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1096: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 7.954 [javac] if (reader.getCoreMetadataList().size() > 1 && externals.length > 1) {
#17 7.954 [javac] ^
#17 7.954 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1121: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 7.954 [javac] seriesCount = reader.getCoreMetadataList().size();
#17 7.954 [javac] ^
#17 7.954 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1211: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 7.954 [javac] if (reader.getCoreMetadataList().size() == 1 && getSeriesCount() > 1) {
#17 7.954 [javac] ^
#17 7.954 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1229: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 7.954 [javac] if (reader.getCoreMetadataList().size() > 1) return 0;
#17 7.954 [javac] ^
#17 7.954 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/FileStitcher.java:1385: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 7.954 [javac] r.setCoreIndex(reader.getCoreMetadataList().size() > 1 ? sno : 0);
#17 7.954 [javac] ^
#17 8.054 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/MinMaxCalculator.java:387: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 8.054 [javac] int seriesCount = unwrap().getCoreMetadataList().size();
#17 8.054 [javac] ^
#17 8.054 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/UpgradeChecker.java:70: warning: [dep-ann] deprecated item is not annotated with @Deprecated
#17 8.055 [javac] public static final String STABLE_VERSION = "6.6.0";
#17 8.055 [javac] ^
#17 8.055 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/UpgradeChecker.java:101: warning: [dep-ann] deprecated item is not annotated with @Deprecated
#17 8.055 [javac] public static final String OLD_TOOLS = "loci_tools.jar";
#17 8.055 [javac] ^
#17 8.055 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/UpgradeChecker.java:230: warning: [deprecation] URL(String) in URL has been deprecated
#17 8.055 [javac] URLConnection conn = new URL(query.toString()).openConnection();
#17 8.055 [javac] ^
#17 8.055 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/UpgradeChecker.java:314: warning: [deprecation] URL(String) in URL has been deprecated
#17 8.055 [javac] URL url = new URL(urlPath);
#17 8.055 [javac] ^
#17 8.155 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/BitBuffer.java:41: warning: [dep-ann] deprecated item is not annotated with @Deprecated
#17 8.155 [javac] public class BitBuffer {
#17 8.155 [javac] ^
#17 8.155 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/BitWriter.java:41: warning: [dep-ann] deprecated item is not annotated with @Deprecated
#17 8.156 [javac] public class BitWriter {
#17 8.156 [javac] ^
#17 8.256 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#17 8.256 [javac] BitWriter out = new BitWriter();
#17 8.256 [javac] ^
#17 8.256 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/codec/NikonCodec.java:194: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#17 8.256 [javac] BitWriter out = new BitWriter();
#17 8.256 [javac] ^
#17 8.356 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/dicom/DicomTag.java:534: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#17 8.356 [javac] return new Double(v);
#17 8.356 [javac] ^
#17 8.957 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2156: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#17 8.957 [javac] return FormatTools.getPhysicalSizeX(new Double(pixelSizeX), UNITS.MILLIMETER);
#17 8.957 [javac] ^
#17 8.957 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2163: warning: [removal] Double(String) in Double has been deprecated and marked for removal
#17 8.957 [javac] return FormatTools.getPhysicalSizeY(new Double(pixelSizeY), UNITS.MILLIMETER);
#17 8.957 [javac] ^
#17 8.957 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/DicomReader.java:2170: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#17 8.957 [javac] return FormatTools.getPhysicalSizeZ(new Double(pixelSizeZ), UNITS.MILLIMETER);
#17 8.957 [javac] ^
#17 9.057 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/ICSReader.java:1142: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#17 9.057 [javac] channelNames.put(new Integer(channelNames.size()), value);
#17 9.057 [javac] ^
#17 9.258 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/OMETiffReader.java:622: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 9.258 [javac] OMETiffCoreMetadata baseCore = new OMETiffCoreMetadata(reader.getCoreMetadataList().get(0));
#17 9.258 [javac] ^
#17 9.258 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/OMETiffReader.java:1376: warning: [dep-ann] deprecated item is not annotated with @Deprecated
#17 9.258 [javac] public MetadataStore getMetadataStoreForDisplay() {
#17 9.258 [javac] ^
#17 9.258 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/OMETiffReader.java:1394: warning: [dep-ann] deprecated item is not annotated with @Deprecated
#17 9.258 [javac] public MetadataStore getMetadataStoreForConversion() {
#17 9.258 [javac] ^
#17 9.258 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/PGMReader.java:158: warning: [deprecation] StreamTokenizer(InputStream) in StreamTokenizer has been deprecated
#17 9.258 [javac] StreamTokenizer st = new StreamTokenizer(in);
#17 9.258 [javac] ^
#17 9.358 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/SlideBook7Reader.java:3095: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#17 9.359 [javac] store.setPlaneExposureTime(new Time(new Double(expTime), UNITS.MILLISECOND), capture, imageIndex);
#17 9.359 [javac] ^
#17 9.459 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffDelegateReader.java:95: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 9.459 [javac] core = new ArrayList<CoreMetadata>(nativeReader.getCoreMetadataList());
#17 9.459 [javac] ^
#17 9.459 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:74: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#17 9.459 [javac] protected ReflectedUniverse r;
#17 9.459 [javac] ^
#17 9.459 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/in/TiffJAIReader.java:103: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#17 9.459 [javac] r = new ReflectedUniverse();
#17 9.459 [javac] ^
#17 9.459 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1044: warning: [deprecation] NM in UNITS has been deprecated
#17 9.459 [javac] wavelength.value = new float[] {wave == null ? 1f : wave.value(UNITS.NM).floatValue()};
#17 9.459 [javac] ^
#17 9.459 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1076: warning: [deprecation] MM in UNITS has been deprecated
#17 9.459 [javac] double pz = physicalZ.value(UNITS.MM).doubleValue();
#17 9.460 [javac] ^
#17 9.460 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1090: warning: [deprecation] MM in UNITS has been deprecated
#17 9.460 [javac] double px = physicalX == null ? 1.0 : physicalX.value(UNITS.MM).doubleValue();
#17 9.460 [javac] ^
#17 9.460 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1091: warning: [deprecation] MM in UNITS has been deprecated
#17 9.460 [javac] double py = physicalY == null ? 1.0 : physicalY.value(UNITS.MM).doubleValue();
#17 9.460 [javac] ^
#17 9.460 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1112: warning: [deprecation] MM in UNITS has been deprecated
#17 9.460 [javac] volumeWidth.value = new float[] {physicalX == null ? 1f : physicalX.value(UNITS.MM).floatValue() * width};
#17 9.460 [javac] ^
#17 9.460 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1116: warning: [deprecation] MM in UNITS has been deprecated
#17 9.460 [javac] volumeHeight.value = new float[] {physicalY == null ? 1f : physicalY.value(UNITS.MM).floatValue() * height};
#17 9.460 [javac] ^
#17 9.460 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1122: warning: [deprecation] MM in UNITS has been deprecated
#17 9.460 [javac] volumeDepth.value = new float[] {physicalZ == null ? 1f : physicalZ.value(UNITS.MM).floatValue() * sizeZ};
#17 9.460 [javac] ^
#17 9.460 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1170: warning: [deprecation] MM in UNITS has been deprecated
#17 9.460 [javac] double ox = physicalX.value(UNITS.MM).floatValue() * width;
#17 9.460 [javac] ^
#17 9.460 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/DicomWriter.java:1175: warning: [deprecation] MM in UNITS has been deprecated
#17 9.460 [javac] double oy = physicalY.value(UNITS.MM).floatValue() * height;
#17 9.460 [javac] ^
#17 9.560 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:223: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#17 9.560 [javac] ifd.put(new Integer(IFD.TILE_WIDTH), new Long(getTileSizeX()));
#17 9.560 [javac] ^
#17 9.561 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:223: warning: [removal] Long(long) in Long has been deprecated and marked for removal
#17 9.561 [javac] ifd.put(new Integer(IFD.TILE_WIDTH), new Long(getTileSizeX()));
#17 9.561 [javac] ^
#17 9.561 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:224: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
#17 9.561 [javac] ifd.put(new Integer(IFD.TILE_LENGTH), new Long(getTileSizeY()));
#17 9.561 [javac] ^
#17 9.561 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/out/TiffWriter.java:224: warning: [removal] Long(long) in Long has been deprecated and marked for removal
#17 9.561 [javac] ifd.put(new Integer(IFD.TILE_LENGTH), new Long(getTileSizeY()));
#17 9.561 [javac] ^
#17 9.661 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/services/JPEGTurboServiceImpl.java:110: warning: [deprecation] loadNativeLibrary(Class<?>,String) in NativeLibraryUtil has been deprecated
#17 9.661 [javac] libraryLoaded = NativeLibraryUtil.loadNativeLibrary(TJ.class, "turbojpeg");
#17 9.661 [javac] ^
#17 9.661 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:324: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#17 9.661 [javac] doubleResult[i] = new Double(result.get(i).doubleValue());
#17 9.661 [javac] ^
#17 9.661 [javac] /bio-formats-build/bioformats/components/formats-bsd/src/loci/formats/tools/AmiraParameters.java:346: warning: [removal] Double(double) in Double has been deprecated and marked for removal
#17 9.661 [javac] result[i] = new Double(readNumber().doubleValue());
#17 9.661 [javac] ^
#17 9.737 [javac] Note: Some input files use unchecked or unsafe operations.
#17 9.737 [javac] Note: Recompile with -Xlint:unchecked for details.
#17 9.737 [javac] 58 warnings
#17 9.737
#17 9.737 formats-bsd.jar:
#17 9.749 [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-bsd.jar
#17 9.865 [resolver:install] Using default POM (ome:formats-bsd:8.6.0-SNAPSHOT)
#17 9.870 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.6.0-SNAPSHOT/formats-bsd-8.6.0-SNAPSHOT.pom
#17 9.871 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.6.0-SNAPSHOT/formats-bsd-8.6.0-SNAPSHOT.jar
#17 9.873 [resolver:install] Installing ome:formats-bsd:8.6.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.6.0-SNAPSHOT/maven-metadata-local.xml
#17 9.875 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#17 9.876
#17 9.876 deps-formats-gpl:
#17 9.876
#17 9.876 jar-formats-gpl:
#17 9.985 [echo] isSnapshot = true
#17 10.12
#17 10.12 init-title:
#17 10.12 [echo] ----------=========== formats-gpl ===========----------
#17 10.12
#17 10.12 init-timestamp:
#17 10.12
#17 10.12 init:
#17 10.12
#17 10.12 copy-resources:
#17 10.12 [mkdir] Created dir: /bio-formats-build/bioformats/components/formats-gpl/build/classes
#17 10.12 [copy] Copying 2 files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#17 10.12
#17 10.12 compile:
#17 10.38 [resolver:resolve] Resolving artifacts
#17 10.40 [javac] Compiling 178 source files to /bio-formats-build/bioformats/components/formats-gpl/build/classes
#17 10.61 [javac] warning: [options] location of system modules is not set in conjunction with -source 11
#17 10.61 [javac] not setting the location of system modules may lead to class files that cannot run on JDK 11
#17 10.61 [javac] --release 11 is recommended instead of -source 11 -target 11 because it sets the location of system modules automatically
#17 14.11 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/LeicaReader.java:1325: warning: non-varargs call of varargs method with inexact argument type for last parameter;
#17 14.11 [javac] LOGGER.trace("Parsing tokens: {}", tokens);
#17 14.11 [javac] ^
#17 14.11 [javac] cast to Object for a varargs call
#17 14.11 [javac] cast to Object[] for a non-varargs call and to suppress this warning
#17 14.21 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1269: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#17 14.21 [javac] BitWriter bits = null;
#17 14.21 [javac] ^
#17 14.21 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/MIASReader.java:1271: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#17 14.21 [javac] bits = new BitWriter(planes[index].length / 8);
#17 14.21 [javac] ^
#17 14.61 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/OlympusTileReader.java:196: warning: [deprecation] getCoreMetadataList() in IFormatReader has been deprecated
#17 14.61 [javac] CoreMetadata ms = new CoreMetadata(helperReader.getCoreMetadataList().get(0));
#17 14.61 [javac] ^
#17 15.01 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TissueFAXSReader.java:469: warning: [deprecation] getImmersion(String) in FormatReader has been deprecated
#17 15.01 [javac] store.setObjectiveImmersion(getImmersion(immersion), 0, index);
#17 15.01 [javac] ^
#17 15.01 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TissueFAXSReader.java:487: warning: [deprecation] getAcquisitionMode(String) in FormatReader has been deprecated
#17 15.01 [javac] AcquisitionMode mode = getAcquisitionMode(acquisitionMode);
#17 15.01 [javac] ^
#17 15.11 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#17 15.11 [javac] BitWriter bits = new BitWriter(roiPixels.length / 8);
#17 15.11 [javac] ^
#17 15.11 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/in/TrestleReader.java:372: warning: [deprecation] BitWriter in loci.formats.codec has been deprecated
#17 15.11 [javac] BitWriter bits = new BitWriter(roiPixels.length / 8);
#17 15.11 [javac] ^
#17 15.41 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:170: warning: [deprecation] findVariable(String) in Group has been deprecated
#17 15.41 [javac] Variable variable = group.findVariable(variableName);
#17 15.41 [javac] ^
#17 15.41 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:197: warning: [deprecation] findVariable(String) in Group has been deprecated
#17 15.41 [javac] Variable variable = group.findVariable(variableName);
#17 15.41 [javac] ^
#17 15.41 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:200: warning: [deprecation] getAttributes() in Variable has been deprecated
#17 15.41 [javac] List<Attribute> attributes = variable.getAttributes();
#17 15.41 [javac] ^
#17 15.41 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:238: warning: [deprecation] getName() in CDMNode has been deprecated
#17 15.41 [javac] String groupName = group.getName();
#17 15.41 [javac] ^
#17 15.41 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:239: warning: [deprecation] getAttributes() in Group has been deprecated
#17 15.41 [javac] List<Attribute> attributes = group.getAttributes();
#17 15.41 [javac] ^
#17 15.41 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:247: warning: [deprecation] getName() in CDMNode has been deprecated
#17 15.41 [javac] String variableName = variable.getName();
#17 15.41 [javac] ^
#17 15.41 [javac] /bio-formats-build/bioformats/components/formats-gpl/src/loci/formats/services/NetCDFServiceImpl.java:270: warning: [deprecation] findGroup(String) in Group has been deprecated
#17 15.41 [javac] Group nextParent = parent.findGroup(token);
#17 15.41 [javac] ^
#17 15.41 [javac] Note: Some input files use unchecked or unsafe operations.
#17 15.41 [javac] Note: Recompile with -Xlint:unchecked for details.
#17 15.41 [javac] 16 warnings
#17 15.43
#17 15.43 formats-gpl.jar:
#17 15.44 [jar] Building jar: /bio-formats-build/bioformats/artifacts/formats-gpl.jar
#17 15.58 [resolver:install] Using default POM (ome:formats-gpl:8.6.0-SNAPSHOT)
#17 15.58 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.6.0-SNAPSHOT/formats-gpl-8.6.0-SNAPSHOT.pom
#17 15.58 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.6.0-SNAPSHOT/formats-gpl-8.6.0-SNAPSHOT.jar
#17 15.59 [resolver:install] Installing ome:formats-gpl:8.6.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.6.0-SNAPSHOT/maven-metadata-local.xml
#17 15.59 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#17 15.59
#17 15.59 deps-bio-formats-plugins:
#17 15.59
#17 15.59 jar-bio-formats-plugins:
#17 15.68 [echo] isSnapshot = true
#17 15.81
#17 15.81 init-title:
#17 15.81 [echo] ----------=========== bio-formats_plugins ===========----------
#17 15.81
#17 15.81 init-timestamp:
#17 15.81
#17 15.81 init:
#17 15.81
#17 15.81 copy-resources:
#17 15.81 [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#17 15.82 [copy] Copying 3 files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#17 15.82
#17 15.82 compile:
#17 16.06 [resolver:resolve] Resolving artifacts
#17 16.07 [javac] Compiling 70 source files to /bio-formats-build/bioformats/components/bio-formats-plugins/build/classes
#17 16.28 [javac] warning: [options] location of system modules is not set in conjunction with -source 11
#17 16.28 [javac] not setting the location of system modules may lead to class files that cannot run on JDK 11
#17 16.28 [javac] --release 11 is recommended instead of -source 11 -target 11 because it sets the location of system modules automatically
#17 17.78 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/Updater.java:51: warning: [deprecation] STABLE_VERSION in UpgradeChecker has been deprecated
#17 17.78 [javac] "Stable build (" + UpgradeChecker.STABLE_VERSION + ")";
#17 17.78 [javac] ^
#17 17.88 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/InstallWizard.java:119: warning: [deprecation] URL(String) in URL has been deprecated
#17 17.88 [javac] URL url = new URL(urlPath);
#17 17.88 [javac] ^
#17 17.88 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#17 17.88 [javac] ReflectedUniverse r = new ReflectedUniverse();
#17 17.88 [javac] ^
#17 17.88 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/ImportProcess.java:632: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#17 17.88 [javac] ReflectedUniverse r = new ReflectedUniverse();
#17 17.88 [javac] ^
#17 18.08 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:161: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#17 18.08 [javac] ReflectedUniverse ru = new ReflectedUniverse();
#17 18.08 [javac] ^
#17 18.08 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/in/DisplayHandler.java:161: warning: [deprecation] ReflectedUniverse in loci.common has been deprecated
#17 18.08 [javac] ReflectedUniverse ru = new ReflectedUniverse();
#17 18.08 [javac] ^
#17 18.28 [javac] /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/shortcut/ShortcutPanel.java:102: warning: [deprecation] URL(String) in URL has been deprecated
#17 18.28 [javac] url = new URL(path);
#17 18.28 [javac] ^
#17 18.48 [javac] Note: /bio-formats-build/bioformats/components/bio-formats-plugins/src/loci/plugins/config/ConfigWindow.java uses unchecked or unsafe operations.
#17 18.48 [javac] Note: Recompile with -Xlint:unchecked for details.
#17 18.48 [javac] 8 warnings
#17 18.52
#17 18.52 bio-formats-plugins.jar:
#17 18.52 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar
#17 18.55 [resolver:install] Using default POM (ome:bio-formats_plugins:8.6.0-SNAPSHOT)
#17 18.55 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.6.0-SNAPSHOT/bio-formats_plugins-8.6.0-SNAPSHOT.pom
#17 18.55 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.6.0-SNAPSHOT/bio-formats_plugins-8.6.0-SNAPSHOT.jar
#17 18.55 [resolver:install] Installing ome:bio-formats_plugins:8.6.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.6.0-SNAPSHOT/maven-metadata-local.xml
#17 18.56 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#17 18.56
#17 18.56 deps-bio-formats-tools:
#17 18.56
#17 18.56 jar-bio-formats-tools:
#17 18.64 [echo] isSnapshot = true
#17 18.80
#17 18.80 init-title:
#17 18.80 [echo] ----------=========== bio-formats-tools ===========----------
#17 18.80
#17 18.80 init-timestamp:
#17 18.80
#17 18.80 init:
#17 18.80
#17 18.80 copy-resources:
#17 18.80 [mkdir] Created dir: /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#17 18.80
#17 18.80 compile:
#17 19.05 [resolver:resolve] Resolving artifacts
#17 19.06 [javac] Compiling 10 source files to /bio-formats-build/bioformats/components/bio-formats-tools/build/classes
#17 19.26 [javac] warning: [options] location of system modules is not set in conjunction with -source 11
#17 19.26 [javac] not setting the location of system modules may lead to class files that cannot run on JDK 11
#17 19.26 [javac] --release 11 is recommended instead of -source 11 -target 11 because it sets the location of system modules automatically
#17 20.56 [javac] 1 warning
#17 20.58
#17 20.58 bio-formats-tools.jar:
#17 20.58 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar
#17 20.59 [resolver:install] Using default POM (ome:bio-formats-tools:8.6.0-SNAPSHOT)
#17 20.60 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.6.0-SNAPSHOT/bio-formats-tools-8.6.0-SNAPSHOT.pom
#17 20.60 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.6.0-SNAPSHOT/bio-formats-tools-8.6.0-SNAPSHOT.jar
#17 20.60 [resolver:install] Installing ome:bio-formats-tools:8.6.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.6.0-SNAPSHOT/maven-metadata-local.xml
#17 20.60 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#17 20.60
#17 20.60 deps-tests:
#17 20.60
#17 20.60 jar-tests:
#17 20.69 [echo] isSnapshot = true
#17 20.81
#17 20.81 init-title:
#17 20.81 [echo] ----------=========== bio-formats-testing-framework ===========----------
#17 20.81
#17 20.81 init-timestamp:
#17 20.81
#17 20.81 init:
#17 20.81
#17 20.81 copy-resources:
#17 20.81 [mkdir] Created dir: /bio-formats-build/bioformats/components/test-suite/build/classes
#17 20.81
#17 20.81 compile:
#17 21.22 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#17 21.50 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#17 21.88 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#17 21.90 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/repository/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#17 22.17 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom
#17 22.59 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18.pom (0 B at 0.0 KB/sec)
#17 22.60 [resolver:resolve] Resolving artifacts
#17 22.61 [resolver:resolve] Downloading https://repo1.maven.org/maven2/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#17 22.67 [resolver:resolve] Downloading https://maven.scijava.org/content/groups/public/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#17 23.01 [resolver:resolve] Downloading https://artifacts.openmicroscopy.org/artifactory/maven/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#17 23.02 [resolver:resolve] Downloading https://artifacts.unidata.ucar.edu/repository/unidata-releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#17 23.28 [resolver:resolve] Downloading https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar
#17 23.64 [resolver:resolve] Downloaded https://repo.jenkins-ci.org/releases/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar (0 B at 0.0 KB/sec)
#17 23.65 [javac] Compiling 23 source files to /bio-formats-build/bioformats/components/test-suite/build/classes
#17 23.85 [javac] warning: [options] location of system modules is not set in conjunction with -source 11
#17 23.85 [javac] not setting the location of system modules may lead to class files that cannot run on JDK 11
#17 23.85 [javac] --release 11 is recommended instead of -source 11 -target 11 because it sets the location of system modules automatically
#17 25.06 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:676: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#17 25.06 [javac] int index = unflattenedReader.getCoreIndex();
#17 25.06 [javac] ^
#17 25.06 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/Configuration.java:677: warning: [deprecation] setCoreIndex(int) in IFormatReader has been deprecated
#17 25.06 [javac] reader.setCoreIndex(index);
#17 25.06 [javac] ^
#17 25.26 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2348: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#17 25.26 [javac] config.setSeries(resolutionReader.getCoreIndex());
#17 25.26 [javac] ^
#17 25.26 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/FormatReaderTest.java:2514: warning: [deprecation] getCoreIndex() in IFormatReader has been deprecated
#17 25.26 [javac] config.setSeries(resolutionReader.getCoreIndex());
#17 25.26 [javac] ^
#17 25.65 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:52: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#17 25.65 [javac] FormatReaderTest i1 = (FormatReaderTest) m1.getInstances()[0];
#17 25.65 [javac] ^
#17 25.65 [javac] /bio-formats-build/bioformats/components/test-suite/src/loci/tests/testng/OrderingListener.java:53: warning: [deprecation] getInstances() in IMethodInstance has been deprecated
#17 25.65 [javac] FormatReaderTest i2 = (FormatReaderTest) m2.getInstances()[0];
#17 25.65 [javac] ^
#17 25.65 [javac] Note: Some input files use unchecked or unsafe operations.
#17 25.65 [javac] Note: Recompile with -Xlint:unchecked for details.
#17 25.65 [javac] 7 warnings
#17 25.65
#17 25.65 tests.jar:
#17 25.65 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar
#17 25.67 [resolver:install] Using default POM (ome:test-suite:8.6.0-SNAPSHOT)
#17 25.67 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.6.0-SNAPSHOT/test-suite-8.6.0-SNAPSHOT.pom
#17 25.67 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.6.0-SNAPSHOT/test-suite-8.6.0-SNAPSHOT.jar
#17 25.68 [resolver:install] Installing ome:test-suite:8.6.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.6.0-SNAPSHOT/maven-metadata-local.xml
#17 25.68 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#17 25.68
#17 25.68 jars:
#17 25.68
#17 25.68 copy-jars:
#17 25.68
#17 25.68 deps-formats-api:
#17 25.73 [echo] isSnapshot = true
#17 25.78
#17 25.78 install-pom:
#17 25.91 [resolver:install] Installing /bio-formats-build/bioformats/pom.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.6.0-SNAPSHOT/pom-bio-formats-8.6.0-SNAPSHOT.pom
#17 25.91 [resolver:install] Installing ome:pom-bio-formats:8.6.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/8.6.0-SNAPSHOT/maven-metadata-local.xml
#17 25.91 [resolver:install] Installing ome:pom-bio-formats/maven-metadata.xml to /home/build/.m2/repository/ome/pom-bio-formats/maven-metadata-local.xml
#17 25.92
#17 25.92 jar-formats-api:
#17 26.01 [echo] isSnapshot = true
#17 26.14
#17 26.14 init-title:
#17 26.14 [echo] ----------=========== formats-api ===========----------
#17 26.14
#17 26.14 init-timestamp:
#17 26.14
#17 26.14 init:
#17 26.14
#17 26.14 copy-resources:
#17 26.14
#17 26.14 compile:
#17 26.26 [resolver:resolve] Resolving artifacts
#17 26.27
#17 26.27 formats-api.jar:
#17 26.29 [resolver:install] Using default POM (ome:formats-api:8.6.0-SNAPSHOT)
#17 26.30 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-api/pom.xml to /home/build/.m2/repository/ome/formats-api/8.6.0-SNAPSHOT/formats-api-8.6.0-SNAPSHOT.pom
#17 26.30 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-api.jar to /home/build/.m2/repository/ome/formats-api/8.6.0-SNAPSHOT/formats-api-8.6.0-SNAPSHOT.jar
#17 26.30 [resolver:install] Installing ome:formats-api:8.6.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/8.6.0-SNAPSHOT/maven-metadata-local.xml
#17 26.30 [resolver:install] Installing ome:formats-api/maven-metadata.xml to /home/build/.m2/repository/ome/formats-api/maven-metadata-local.xml
#17 26.30
#17 26.30 deps-turbojpeg:
#17 26.30
#17 26.30 jar-turbojpeg:
#17 26.39 [echo] isSnapshot = true
#17 26.55
#17 26.55 init-title:
#17 26.55 [echo] ----------=========== turbojpeg ===========----------
#17 26.55
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#17 26.56 [resolver:resolve] Resolving artifacts
#17 26.56
#17 26.56 jar:
#17 26.57 [resolver:install] Using default POM (ome:turbojpeg:8.6.0-SNAPSHOT)
#17 26.58 [resolver:install] Installing /bio-formats-build/bioformats/components/forks/turbojpeg/pom.xml to /home/build/.m2/repository/ome/turbojpeg/8.6.0-SNAPSHOT/turbojpeg-8.6.0-SNAPSHOT.pom
#17 26.58 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/turbojpeg.jar to /home/build/.m2/repository/ome/turbojpeg/8.6.0-SNAPSHOT/turbojpeg-8.6.0-SNAPSHOT.jar
#17 26.58 [resolver:install] Installing ome:turbojpeg:8.6.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/8.6.0-SNAPSHOT/maven-metadata-local.xml
#17 26.58 [resolver:install] Installing ome:turbojpeg/maven-metadata.xml to /home/build/.m2/repository/ome/turbojpeg/maven-metadata-local.xml
#17 26.58
#17 26.58 deps-formats-bsd:
#17 26.58
#17 26.58 jar-formats-bsd:
#17 26.67 [echo] isSnapshot = true
#17 26.81
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#17 26.81 [echo] ----------=========== formats-bsd ===========----------
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#17 27.01 [resolver:resolve] Resolving artifacts
#17 27.03
#17 27.03 formats-bsd.jar:
#17 27.07 [resolver:install] Using default POM (ome:formats-bsd:8.6.0-SNAPSHOT)
#17 27.07 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-bsd/pom.xml to /home/build/.m2/repository/ome/formats-bsd/8.6.0-SNAPSHOT/formats-bsd-8.6.0-SNAPSHOT.pom
#17 27.07 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-bsd.jar to /home/build/.m2/repository/ome/formats-bsd/8.6.0-SNAPSHOT/formats-bsd-8.6.0-SNAPSHOT.jar
#17 27.07 [resolver:install] Installing ome:formats-bsd:8.6.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/8.6.0-SNAPSHOT/maven-metadata-local.xml
#17 27.08 [resolver:install] Installing ome:formats-bsd/maven-metadata.xml to /home/build/.m2/repository/ome/formats-bsd/maven-metadata-local.xml
#17 27.08
#17 27.08 deps-formats-gpl:
#17 27.08
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#17 27.16 [echo] isSnapshot = true
#17 27.29
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#17 27.29 [echo] ----------=========== formats-gpl ===========----------
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#17 27.52 [resolver:resolve] Resolving artifacts
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#17 27.54 formats-gpl.jar:
#17 27.58 [resolver:install] Using default POM (ome:formats-gpl:8.6.0-SNAPSHOT)
#17 27.58 [resolver:install] Installing /bio-formats-build/bioformats/components/formats-gpl/pom.xml to /home/build/.m2/repository/ome/formats-gpl/8.6.0-SNAPSHOT/formats-gpl-8.6.0-SNAPSHOT.pom
#17 27.58 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/formats-gpl.jar to /home/build/.m2/repository/ome/formats-gpl/8.6.0-SNAPSHOT/formats-gpl-8.6.0-SNAPSHOT.jar
#17 27.58 [resolver:install] Installing ome:formats-gpl:8.6.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/8.6.0-SNAPSHOT/maven-metadata-local.xml
#17 27.58 [resolver:install] Installing ome:formats-gpl/maven-metadata.xml to /home/build/.m2/repository/ome/formats-gpl/maven-metadata-local.xml
#17 27.58
#17 27.58 deps-bio-formats-plugins:
#17 27.58
#17 27.58 jar-bio-formats-plugins:
#17 27.67 [echo] isSnapshot = true
#17 27.79
#17 27.79 init-title:
#17 27.79 [echo] ----------=========== bio-formats_plugins ===========----------
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#17 28.05 bio-formats-plugins.jar:
#17 28.06 [resolver:install] Using default POM (ome:bio-formats_plugins:8.6.0-SNAPSHOT)
#17 28.06 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-plugins/pom.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.6.0-SNAPSHOT/bio-formats_plugins-8.6.0-SNAPSHOT.pom
#17 28.06 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats_plugins.jar to /home/build/.m2/repository/ome/bio-formats_plugins/8.6.0-SNAPSHOT/bio-formats_plugins-8.6.0-SNAPSHOT.jar
#17 28.06 [resolver:install] Installing ome:bio-formats_plugins:8.6.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/8.6.0-SNAPSHOT/maven-metadata-local.xml
#17 28.07 [resolver:install] Installing ome:bio-formats_plugins/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats_plugins/maven-metadata-local.xml
#17 28.07
#17 28.07 deps-bio-formats-tools:
#17 28.07
#17 28.07 jar-bio-formats-tools:
#17 28.15 [echo] isSnapshot = true
#17 28.27
#17 28.27 init-title:
#17 28.27 [echo] ----------=========== bio-formats-tools ===========----------
#17 28.27
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#17 28.27 init:
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#17 28.27
#17 28.27 compile:
#17 28.51 [resolver:resolve] Resolving artifacts
#17 28.52
#17 28.52 bio-formats-tools.jar:
#17 28.52 [resolver:install] Using default POM (ome:bio-formats-tools:8.6.0-SNAPSHOT)
#17 28.52 [resolver:install] Installing /bio-formats-build/bioformats/components/bio-formats-tools/pom.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.6.0-SNAPSHOT/bio-formats-tools-8.6.0-SNAPSHOT.pom
#17 28.52 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-tools.jar to /home/build/.m2/repository/ome/bio-formats-tools/8.6.0-SNAPSHOT/bio-formats-tools-8.6.0-SNAPSHOT.jar
#17 28.53 [resolver:install] Installing ome:bio-formats-tools:8.6.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/8.6.0-SNAPSHOT/maven-metadata-local.xml
#17 28.53 [resolver:install] Installing ome:bio-formats-tools/maven-metadata.xml to /home/build/.m2/repository/ome/bio-formats-tools/maven-metadata-local.xml
#17 28.53
#17 28.53 deps-tests:
#17 28.53
#17 28.53 jar-tests:
#17 28.62 [echo] isSnapshot = true
#17 28.76
#17 28.76 init-title:
#17 28.76 [echo] ----------=========== bio-formats-testing-framework ===========----------
#17 28.76
#17 28.76 init-timestamp:
#17 28.76
#17 28.76 init:
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#17 28.76 copy-resources:
#17 28.76
#17 28.76 compile:
#17 28.99 [resolver:resolve] Resolving artifacts
#17 29.00
#17 29.00 tests.jar:
#17 29.00 [resolver:install] Using default POM (ome:test-suite:8.6.0-SNAPSHOT)
#17 29.01 [resolver:install] Installing /bio-formats-build/bioformats/components/test-suite/pom.xml to /home/build/.m2/repository/ome/test-suite/8.6.0-SNAPSHOT/test-suite-8.6.0-SNAPSHOT.pom
#17 29.01 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bio-formats-testing-framework.jar to /home/build/.m2/repository/ome/test-suite/8.6.0-SNAPSHOT/test-suite-8.6.0-SNAPSHOT.jar
#17 29.01 [resolver:install] Installing ome:test-suite:8.6.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/8.6.0-SNAPSHOT/maven-metadata-local.xml
#17 29.01 [resolver:install] Installing ome:test-suite/maven-metadata.xml to /home/build/.m2/repository/ome/test-suite/maven-metadata-local.xml
#17 29.01
#17 29.01 jars:
#17 29.01
#17 29.01 tools:
#17 29.01 [echo] ----------=========== bioformats_package ===========----------
#17 29.09 [echo] isSnapshot = true
#17 29.21
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#17 29.21
#17 29.21 bundle:
#17 29.45 [resolver:resolve] Resolving artifacts
#17 29.45 [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats_plugins/8.6.0-SNAPSHOT/bio-formats_plugins-8.6.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 29.49 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-common/6.3.1-SNAPSHOT/ome-common-6.3.1-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 29.50 [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-databind/2.22.0/jackson-databind-2.22.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 29.73 [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-annotations/2.22/jackson-annotations-2.22.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 29.75 [unzip] Expanding: /home/build/.m2/repository/com/fasterxml/jackson/core/jackson-core/2.22.0/jackson-core-2.22.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 29.82 [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/kryo/5.4.0/kryo-5.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 29.88 [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/reflectasm/1.11.9/reflectasm-1.11.9.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 29.89 [unzip] Expanding: /home/build/.m2/repository/org/objenesis/objenesis/3.3/objenesis-3.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 29.90 [unzip] Expanding: /home/build/.m2/repository/com/esotericsoftware/minlog/1.3.1/minlog-1.3.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 29.90 [unzip] Expanding: /home/build/.m2/repository/joda-time/joda-time/2.12.7/joda-time-2.12.7.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 30.06 [unzip] Expanding: /home/build/.m2/repository/com/google/guava/guava/32.0.1-jre/guava-32.0.1-jre.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 30.54 [unzip] Expanding: /home/build/.m2/repository/com/google/guava/failureaccess/1.0.1/failureaccess-1.0.1.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 30.54 [unzip] Expanding: /home/build/.m2/repository/com/google/guava/listenablefuture/9999.0-empty-to-avoid-conflict-with-guava/listenablefuture-9999.0-empty-to-avoid-conflict-with-guava.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 30.54 [unzip] Expanding: /home/build/.m2/repository/com/google/code/findbugs/jsr305/3.0.2/jsr305-3.0.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 30.55 [unzip] Expanding: /home/build/.m2/repository/org/checkerframework/checker-qual/3.33.0/checker-qual-3.33.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 30.63 [unzip] Expanding: /home/build/.m2/repository/com/google/errorprone/error_prone_annotations/2.18.0/error_prone_annotations-2.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 30.63 [unzip] Expanding: /home/build/.m2/repository/com/google/j2objc/j2objc-annotations/2.8/j2objc-annotations-2.8.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 30.64 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-xml/6.6.1-SNAPSHOT/ome-xml-6.6.1-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 30.69 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/specification/6.6.1-SNAPSHOT/specification-6.6.1-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 30.75 [unzip] Expanding: /home/build/.m2/repository/ome/formats-api/8.6.0-SNAPSHOT/formats-api-8.6.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 30.76 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-codecs/1.2.1-SNAPSHOT/ome-codecs-1.2.1-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 30.77 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-jai/0.2.1-SNAPSHOT/ome-jai-0.2.1-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 30.91 [unzip] Expanding: /home/build/.m2/repository/io/airlift/aircompressor/2.0.3/aircompressor-2.0.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 30.94 [unzip] Expanding: /home/build/.m2/repository/ome/formats-bsd/8.6.0-SNAPSHOT/formats-bsd-8.6.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 31.01 [unzip] Expanding: /home/build/.m2/repository/ome/turbojpeg/8.6.0-SNAPSHOT/turbojpeg-8.6.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 31.05 [unzip] Expanding: /home/build/.m2/repository/org/scijava/native-lib-loader/2.4.0/native-lib-loader-2.4.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 31.06 [unzip] Expanding: /home/build/.m2/repository/org/apache/commons/commons-lang3/3.18.0/commons-lang3-3.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 31.15 [unzip] Expanding: /home/build/.m2/repository/org/perf4j/perf4j/0.9.16/perf4j-0.9.16.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#17 31.60 [unzip] Expanding: /home/build/.m2/repository/cisd/base/18.09.0/base-18.09.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 31.62 [unzip] Expanding: /home/build/.m2/repository/commons-io/commons-io/2.6/commons-io-2.6.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 31.65 [unzip] Expanding: /home/build/.m2/repository/com/drewnoakes/metadata-extractor/2.18.0/metadata-extractor-2.18.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 31.75 [unzip] Expanding: /home/build/.m2/repository/com/adobe/xmp/xmpcore/6.1.11/xmpcore-6.1.11.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 31.77 [unzip] Expanding: /home/build/.m2/repository/ome/jxrlib-all/0.2.4/jxrlib-all-0.2.4.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 31.78 [unzip] Expanding: /home/build/.m2/repository/org/json/json/20231013/json-20231013.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 31.79 [unzip] Expanding: /home/build/.m2/repository/xerces/xercesImpl/2.12.2/xercesImpl-2.12.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 32.01 [unzip] Expanding: /home/build/.m2/repository/xml-apis/xml-apis/1.4.01/xml-apis-1.4.01.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 32.08 [unzip] Expanding: /home/build/.m2/repository/org/yaml/snakeyaml/2.0/snakeyaml-2.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 32.13 [unzip] Expanding: /home/build/.m2/repository/ome/formats-gpl/8.6.0-SNAPSHOT/formats-gpl-8.6.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 32.23 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-mdbtools/5.4.1-SNAPSHOT/ome-mdbtools-5.4.1-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 32.25 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/metakit/5.4.1-SNAPSHOT/metakit-5.4.1-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 32.25 [unzip] Expanding: /home/build/.m2/repository/org/openmicroscopy/ome-poi/5.4.1-SNAPSHOT/ome-poi-5.4.1-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 32.38 [unzip] Expanding: /home/build/.m2/repository/commons-logging/commons-logging/1.2/commons-logging-1.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#17 32.97 [unzip] Expanding: /home/build/.m2/repository/commons-codec/commons-codec/1.11/commons-codec-1.11.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 33.03 [unzip] Expanding: /home/build/.m2/repository/org/apache/httpcomponents/httpmime/4.5.14/httpmime-4.5.14.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
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#17 33.71 [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-forms/1.7.2/jgoodies-forms-1.7.2.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 33.73 [unzip] Expanding: /home/build/.m2/repository/com/jgoodies/jgoodies-common/1.7.0/jgoodies-common-1.7.0.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 33.74 [unzip] Expanding: /home/build/.m2/repository/org/slf4j/slf4j-api/2.0.18/slf4j-api-2.0.18.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 33.75 [unzip] Expanding: /home/build/.m2/repository/ome/bio-formats-tools/8.6.0-SNAPSHOT/bio-formats-tools-8.6.0-SNAPSHOT.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 33.75 [unzip] Expanding: /home/build/.m2/repository/xalan/serializer/2.7.3/serializer-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 33.78 [unzip] Expanding: /home/build/.m2/repository/xalan/xalan/2.7.3/xalan-2.7.3.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 34.17 [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-core/1.5.34/logback-core-1.5.34.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 34.29 [unzip] Expanding: /home/build/.m2/repository/ch/qos/logback/logback-classic/1.5.34/logback-classic-1.5.34.jar into /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 34.77 [jar] Building jar: /bio-formats-build/bioformats/artifacts/bioformats_package.jar
#17 41.75 [delete] Deleting directory /bio-formats-build/bioformats/components/bundles/bioformats_package/build/unzip
#17 42.42 [resolver:install] Using default POM (ome:bioformats_package:8.6.0-SNAPSHOT)
#17 42.42 [resolver:install] Installing /bio-formats-build/bioformats/components/bundles/bioformats_package/pom.xml to /home/build/.m2/repository/ome/bioformats_package/8.6.0-SNAPSHOT/bioformats_package-8.6.0-SNAPSHOT.pom
#17 42.42 [resolver:install] Installing /bio-formats-build/bioformats/artifacts/bioformats_package.jar to /home/build/.m2/repository/ome/bioformats_package/8.6.0-SNAPSHOT/bioformats_package-8.6.0-SNAPSHOT.jar
#17 42.46 [resolver:install] Installing ome:bioformats_package:8.6.0-SNAPSHOT/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/8.6.0-SNAPSHOT/maven-metadata-local.xml
#17 42.47 [resolver:install] Installing ome:bioformats_package/maven-metadata.xml to /home/build/.m2/repository/ome/bioformats_package/maven-metadata-local.xml
#17 42.47
#17 42.47 BUILD SUCCESSFUL
#17 42.47 Total time: 42 seconds
#17 DONE 43.4s
#18 [14/14] WORKDIR /bio-formats-build/bioformats/components/test-suite
#18 DONE 0.2s
#19 exporting to image
#19 exporting layers
#19 exporting layers 3.6s done
#19 writing image sha256:a40d910a24ef95490a023cc0575cfd3f60ac6386bdeb948c2736e5025673b142 done
#19 naming to docker.io/snoopycrimecop/bioformats:merge_ci done
#19 DONE 3.6s
WARNING: current commit information was not captured by the build: failed to read current commit information with git rev-parse --is-inside-work-tree
Finished: SUCCESS