Skip to content
Sign in

Console

Download View as plain text
01:23:42 Started by upstream project "Trigger" build number 28
01:23:42 originally caused by:
01:23:42  Started by timer
01:23:42 Running as SYSTEM
01:23:42 Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-build
01:23:42 The recommended git tool is: NONE
01:23:42 No credentials specified
01:23:42  > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-build/src/.git # timeout=10
01:23:42 Fetching changes from the remote Git repository
01:23:42  > git config remote.origin.url https://github.com/snoopycrimecop/openmicroscopy.git # timeout=10
01:23:42 Fetching upstream changes from https://github.com/snoopycrimecop/openmicroscopy.git
01:23:42  > git --version # timeout=10
01:23:42  > git --version # 'git version 2.52.0'
01:23:42  > git fetch --tags --force --progress -- https://github.com/snoopycrimecop/openmicroscopy.git +refs/heads/*:refs/remotes/origin/* # timeout=30
01:23:46  > git rev-parse origin/merge_ci^{commit} # timeout=10
01:23:46 Checking out Revision 6d5491b19236ddb5f81a0098fb53f42addb78782 (origin/merge_ci)
01:23:46  > git config core.sparsecheckout # timeout=10
01:23:46  > git checkout -f 6d5491b19236ddb5f81a0098fb53f42addb78782 # timeout=10
01:23:51 Commit message: "Add version.properties to etc/omero.properties"
01:23:51  > git rev-list --no-walk a8be5a47c7f26867dcbbfb89234121d1b6e748a4 # timeout=10
01:23:51 Cleaning workspace
01:23:51  > git rev-parse --verify HEAD # timeout=10
01:23:51 Resetting working tree
01:23:51  > git reset --hard # timeout=10
01:23:51  > git clean -fdx # timeout=10
01:24:40 Copied 6 artifacts from "OMERO-python-superbuild-build" build number 17
01:24:40 [OMERO-build] $ /bin/bash -xe /tmp/jenkins3277641513398858727.sh
01:24:40 + mv omero-scripts/dist/omero_scripts-5.10.1.dev0.tar.gz .
01:24:40 + cd src
01:24:40 + export OMERO_BRANCH=merge_ci
01:24:40 + OMERO_BRANCH=merge_ci
01:24:40 + OMERO_VEN=/home/omero/workspace/OMERO-build/omero-virtualenv
01:24:40 + rm -rf /home/omero/workspace/OMERO-build/omero-virtualenv
01:25:28 + source /home/omero/settings.env
01:25:28 ++ OMERO_DB_HOST=pg
01:25:28 ++ OMERO_DB_USER=postgres
01:25:28 ++ OMERO_DB_PASS=
01:25:28 ++ OMERO_ROOT_PASS=omero
01:25:28 ++ OMERO_DATA_DIR=/OMERO
01:25:28 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
01:25:28 + python3.11 -m venv /home/omero/workspace/OMERO-build/omero-virtualenv
01:25:57 + /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl
01:25:59 Collecting zeroc-ice==3.6.5
01:25:59   Downloading https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl (37.3 MB)
01:26:02      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 37.3/37.3 MB 11.1 MB/s eta 0:00:00
01:26:02 Installing collected packages: zeroc-ice
01:26:07 Successfully installed zeroc-ice-3.6.5
01:26:08 
01:26:08 [notice] A new release of pip available: 22.3.1 -> 26.1.2
01:26:08 [notice] To update, run: python3.11 -m pip install --upgrade pip
01:26:08 + /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install -U 'setuptools<66' omero-py
01:26:09 Requirement already satisfied: setuptools<66 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages (65.5.1)
01:26:09 Collecting setuptools<66
01:26:09   Using cached setuptools-65.7.0-py3-none-any.whl (1.2 MB)
01:26:10 Collecting omero-py
01:26:10   Using cached omero_py-5.22.1-py3-none-any.whl (2.8 MB)
01:26:10 Collecting appdirs
01:26:10   Using cached appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB)
01:26:10 Collecting future
01:26:10   Using cached future-1.0.0-py3-none-any.whl (491 kB)
01:26:11 Collecting numpy<3,>=2
01:26:11   Using cached numpy-2.4.6-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (16.9 MB)
01:26:12 Collecting Pillow>=10.0.0
01:26:12   Using cached pillow-12.3.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (6.9 MB)
01:26:12 Collecting PyYAML
01:26:12   Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB)
01:26:12 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages (from omero-py) (3.6.5)
01:26:12 Collecting requests
01:26:12   Using cached requests-2.34.2-py3-none-any.whl (73 kB)
01:26:12 Collecting portalocker
01:26:12   Using cached portalocker-3.2.0-py3-none-any.whl (22 kB)
01:26:13 Collecting charset_normalizer<4,>=2
01:26:13   Using cached charset_normalizer-3.4.9-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (221 kB)
01:26:13 Collecting idna<4,>=2.5
01:26:13   Using cached idna-3.18-py3-none-any.whl (65 kB)
01:26:13 Collecting urllib3<3,>=1.26
01:26:13   Using cached urllib3-2.7.0-py3-none-any.whl (131 kB)
01:26:13 Collecting certifi>=2023.5.7
01:26:13   Using cached certifi-2026.7.22-py3-none-any.whl (136 kB)
01:26:13 Installing collected packages: appdirs, urllib3, setuptools, PyYAML, portalocker, Pillow, numpy, idna, future, charset_normalizer, certifi, requests, omero-py
01:26:14   Attempting uninstall: setuptools
01:26:14     Found existing installation: setuptools 65.5.1
01:26:15     Uninstalling setuptools-65.5.1:
01:26:16       Successfully uninstalled setuptools-65.5.1
01:27:34 Successfully installed Pillow-12.3.0 PyYAML-6.0.3 appdirs-1.4.4 certifi-2026.7.22 charset_normalizer-3.4.9 future-1.0.0 idna-3.18 numpy-2.4.6 omero-py-5.22.1 portalocker-3.2.0 requests-2.34.2 setuptools-65.7.0 urllib3-2.7.0
01:27:34 
01:27:34 [notice] A new release of pip available: 22.3.1 -> 26.1.2
01:27:34 [notice] To update, run: python3.11 -m pip install --upgrade pip
01:27:35 + source /home/omero/workspace/OMERO-build/omero-virtualenv/bin/activate
01:27:35 ++ deactivate nondestructive
01:27:35 ++ '[' -n '' ']'
01:27:35 ++ '[' -n '' ']'
01:27:35 ++ hash -r
01:27:35 ++ '[' -n '' ']'
01:27:35 ++ unset VIRTUAL_ENV
01:27:35 ++ unset VIRTUAL_ENV_PROMPT
01:27:35 ++ '[' '!' nondestructive = nondestructive ']'
01:27:35 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-build/omero-virtualenv
01:27:35 ++ export VIRTUAL_ENV
01:27:35 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
01:27:35 ++ PATH=/home/omero/workspace/OMERO-build/omero-virtualenv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
01:27:35 ++ export PATH
01:27:35 ++ '[' -n '' ']'
01:27:35 ++ '[' -z '' ']'
01:27:35 ++ _OLD_VIRTUAL_PS1=
01:27:35 ++ PS1='(omero-virtualenv) '
01:27:35 ++ export PS1
01:27:35 ++ VIRTUAL_ENV_PROMPT='(omero-virtualenv) '
01:27:35 ++ export VIRTUAL_ENV_PROMPT
01:27:35 ++ hash -r
01:27:35 + source docs/hudson/OMERO.sh
01:27:35 ++ set -e
01:27:35 ++ set -u
01:27:35 ++ set -x
01:27:35 ++ source docs/hudson/functions.sh
01:27:35 ++ echo Building merge_ci
01:27:35 Building merge_ci
01:27:35 ++ python3 ./build.py build-dev release-all
01:27:35 Buildfile: /home/omero/workspace/OMERO-build/src/build.xml
01:27:37 
01:27:37 check-ivy:
01:27:37 Creating /home/omero/workspace/OMERO-build/src/etc/local.properties
01:27:37 Created dir: /home/omero/workspace/OMERO-build/src/target
01:27:37 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
01:27:37 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:27:39 
01:27:39 build-scons:
01:27:39 Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
01:27:42 No sub-builds to iterate on
01:27:42 Entering /home/omero/workspace/OMERO-build/src/components/tools...
01:27:43 
01:27:43 buildlist:
01:27:43 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
01:27:43 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:27:43 
01:27:43 clean:
01:27:43 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
01:27:44 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
01:27:44 
01:27:44 python-clean:
01:27:44 WARNING: '' not a valid package name; please use only .-separated package names in setup.py
01:27:44 /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages/setuptools/dist.py:543: UserWarning: The version specified ('5.6.3-637-6d5491b192-ice36-b19') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
01:27:44   warnings.warn(
01:27:44 running clean
01:27:44 Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb/omero_version.py
01:27:45 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
01:27:46 
01:27:46 python-clean:
01:27:46 WARNING: '' not a valid package name; please use only .-separated package names in setup.py
01:27:46 /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages/setuptools/dist.py:543: UserWarning: The version specified ('5.6.3-637-6d5491b192-ice36-b19') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
01:27:46   warnings.warn(
01:27:46 running clean
01:27:46 Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS/omero_version.py
01:27:47 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
01:27:48 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
01:27:48 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
01:27:48 
01:27:48 python-clean:
01:27:48 WARNING: '' not a valid package name; please use only .-separated package names in setup.py
01:27:48 /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages/setuptools/dist.py:543: UserWarning: The version specified ('5.6.3-637-6d5491b192-ice36-b19') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
01:27:48   warnings.warn(
01:27:48 running clean
01:27:48 Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy/omero_version.py
01:27:48 Deleting directory /home/omero/workspace/OMERO-build/src/target
01:27:50 
01:27:50 build-scons:
01:27:50 Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
01:27:53 
01:27:53 build:
01:27:53 No sub-builds to iterate on
01:27:53 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
01:27:54 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
01:27:54 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
01:27:55 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
01:27:55 
01:27:55 tools-init:
01:27:55 no-op
01:27:55 
01:27:55 retrieve:
01:27:55 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
01:27:55 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:29:18 
01:29:18 prepare:
01:29:18 Preparing: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs
01:29:18 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/.done
01:29:18 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/src
01:29:18 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
01:29:18 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
01:29:18 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
01:29:18 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/reports
01:29:18 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
01:29:18 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
01:29:18 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
01:29:18 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
01:29:18 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
01:29:18 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
01:29:18 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
01:29:18 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
01:29:18 
01:29:18 pre-compile:
01:29:18 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/glacier2.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
01:29:20 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ice.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
01:29:27 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icegrid.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
01:29:31 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icestorm.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
01:29:32 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ome-xml.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
01:29:34 
01:29:34 compile:
01:29:34 no-op
01:29:34 
01:29:34 package:
01:29:34 Building jar: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/omero_client.jar
01:29:38 
01:29:38 install:
01:29:38 :: delivering :: omero#omero_client;working@efd076742dd1 :: 5.6.3-637-6d5491b192-ice36-b19 :: integration :: Fri Jul 24 01:27:54 UTC 2026
01:29:38 	delivering ivy file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/ivy.xml
01:29:38 :: publishing :: omero#omero_client
01:29:38 	published omero_client to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-637-6d5491b192-ice36-b19/omero_client-5.6.3-637-6d5491b192-ice36-b19.jar
01:29:38 	published ivy to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-637-6d5491b192-ice36-b19/omero_client-5.6.3-637-6d5491b192-ice36-b19.xml
01:29:39 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
01:29:39 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
01:29:39 
01:29:39 retrieve:
01:29:39 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
01:29:39 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:29:40 Entering /home/omero/workspace/OMERO-build/src/components/tools...
01:29:40 
01:29:40 dist:
01:29:40 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/service-classes/META-INF
01:29:40 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/lib/server
01:29:40 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
01:29:40 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts/omero_scripts-5.10.1.dev0.tar.gz into /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
01:29:40 Copying 29 files to /home/omero/workspace/OMERO-build/src/components/tools/target/lib/scripts
01:29:41 Copying 29 files to /home/omero/workspace/OMERO-build/src/dist
01:29:41 Copied 9 empty directories to 1 empty directory under /home/omero/workspace/OMERO-build/src/dist
01:29:41 Entering /home/omero/workspace/OMERO-build/src/components/tests...
01:29:41 Entering /home/omero/workspace/OMERO-build/src/components/tests/ui...
01:29:42 
01:29:42 copy-licenses:
01:29:42 Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
01:29:42 Created dir: /home/omero/workspace/OMERO-build/src/dist/share
01:29:42 Copying 44 files to /home/omero/workspace/OMERO-build/src/dist/share
01:29:43 
01:29:43 copy-history:
01:29:43 Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
01:29:43 
01:29:43 copy-etc:
01:29:43 Copying 28 files to /home/omero/workspace/OMERO-build/src/dist/etc
01:29:43 Copying 1 file to /home/omero/workspace/OMERO-build/src/dist/etc/templates
01:29:43 
01:29:43 copy-sql:
01:29:43 Copying 60 files to /home/omero/workspace/OMERO-build/src/dist
01:29:55 
01:29:55 copy-server:
01:29:55 	conflict on /home/omero/workspace/OMERO-build/src/dist/lib/server/janino.jar in [server]: 3.1.9 won
01:30:00 
01:30:00 copy-client:
01:30:00 Created dir: /home/omero/workspace/OMERO-build/src/dist/lib/client
01:30:03 	conflict on /home/omero/workspace/OMERO-build/src/dist/lib/client/janino.jar in [client]: 3.1.9 won
01:30:07 
01:30:07 update-version:
01:30:07 Copying 1 file to /home/omero/workspace/OMERO-build/src/dist/etc
01:30:07 
01:30:07 create-workdirs:
01:30:07 Created dir: /home/omero/workspace/OMERO-build/src/dist/etc/grid
01:30:08 Created dir: /home/omero/workspace/OMERO-build/src/dist/var
01:30:08 Created dir: /home/omero/workspace/OMERO-build/src/dist/var/tmp
01:30:08 
01:30:08 copy-luts:
01:30:08 Created dir: /home/omero/workspace/OMERO-build/src/dist/lib/scripts/luts
01:30:08 Copying 47 files to /home/omero/workspace/OMERO-build/src/dist/lib/scripts/luts
01:30:08 
01:30:08 test-compile:
01:30:08 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:30:08 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
01:30:13 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
01:30:13 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
01:30:13 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
01:30:14 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
01:30:14 Entering /home/omero/workspace/OMERO-build/src/components/tests/ui...
01:30:15 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
01:30:15 
01:30:15 testng-init:
01:30:15 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
01:30:15 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:30:37 01:30:37,270 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.16
01:30:37 01:30:37,273 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1492c9d - No custom configurators were discovered as a service.
01:30:37 01:30:37,273 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1492c9d - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
01:30:37 01:30:37,277 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1492c9d - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
01:30:37 01:30:37,282 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
01:30:37 01:30:37,285 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
01:30:37 01:30:37,286 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1492c9d - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 9 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
01:30:37 01:30:37,286 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1492c9d - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
01:30:37 01:30:37,288 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1492c9d - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
01:30:37 01:30:37,291 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
01:30:37 01:30:37,293 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes/logback.xml]
01:30:37 01:30:37,295 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@24df8abf - Resource [logback.xml] occurs multiple times on the classpath.
01:30:37 01:30:37,295 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@24df8abf - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes/logback.xml]
01:30:37 01:30:37,295 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@24df8abf - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources/logback.xml]
01:30:37 01:30:37,538 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stderr]
01:30:37 01:30:37,538 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
01:30:37 01:30:37,561 |-INFO in ch.qos.logback.core.model.processor.ImplicitModelHandler - Assuming default type [ch.qos.logback.classic.encoder.PatternLayoutEncoder] for [encoder] property
01:30:37 01:30:37,563 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@390d47db - As of version 1.2.0 "immediateFlush" property should be set within the enclosing Appender.
01:30:37 01:30:37,563 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@390d47db - Please move "immediateFlush" property into the enclosing appender.
01:30:37 01:30:37,637 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@390d47db - Setting the "immediateFlush" property of the enclosing appender to true
01:30:37 01:30:37,638 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [velocity] to ERROR
01:30:37 01:30:37,638 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [org] to ERROR
01:30:37 01:30:37,638 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [ome] to ERROR
01:30:37 01:30:37,638 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci] to ERROR
01:30:37 01:30:37,638 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to WARN
01:30:37 01:30:37,638 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stderr] to Logger[ROOT]
01:30:37 01:30:37,640 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@6aa09c35 - End of configuration.
01:30:37 01:30:37,642 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@22457838 - Registering current configuration as safe fallback point
01:30:37 01:30:37,642 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1492c9d - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 354 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
01:30:37 
01:30:37 lifecycle.test-compile:
01:30:37 Copying 3 files to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
01:30:38 Compiling 85 source files to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
01:30:38 warning: [options] bootstrap class path not set in conjunction with -source 8
01:30:38 warning: [options] source value 8 is obsolete and will be removed in a future release
01:30:38 warning: [options] target value 8 is obsolete and will be removed in a future release
01:30:38 warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
01:30:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/AbstractServerTest.java:61: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:30:40 import omero.grid.RawAccessRequest;
01:30:40                  ^
01:30:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:32: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:30:40 import omero.grid.RawAccessRequest;
01:30:40                  ^
01:30:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:53: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:30:40 import omero.grid.RawAccessRequest;
01:30:40                  ^
01:30:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:31: warning: [deprecation] ImportJob in omero.model has been deprecated
01:30:40 import omero.model.ImportJob;
01:30:40                   ^
01:30:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:32: warning: [deprecation] ImportJobI in omero.model has been deprecated
01:30:40 import omero.model.ImportJobI;
01:30:40                   ^
01:30:41 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ModelMockFactory.java:1206: warning: [deprecation] newInstance() in Class has been deprecated
01:30:41         IObject link = (IObject) linkClass.newInstance();
01:30:41                                           ^
01:30:41   where T is a type-variable:
01:30:41     T extends Object declared in class Class
01:30:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/CreatePojosFixture2.java:269: warning: [deprecation] newInstance() in Class has been deprecated
01:30:42         T copy = (T) obj.getClass().newInstance();
01:30:42                                    ^
01:30:42   where T is a type-variable:
01:30:42     T extends Object declared in class Class
01:30:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:30:42         RawAccessRequest raw = new RawAccessRequest();
01:30:42         ^
01:30:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:30:42         RawAccessRequest raw = new RawAccessRequest();
01:30:42                                    ^
01:30:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:419: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
01:30:42         raw.repoUuid = legacy.root().getHash().getValue();
01:30:42            ^
01:30:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:420: warning: [deprecation] command in RawAccessRequest has been deprecated
01:30:42         raw.command = "rm";
01:30:42            ^
01:30:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:421: warning: [deprecation] args in RawAccessRequest has been deprecated
01:30:42         raw.args = Arrays.asList(path);
01:30:42            ^
01:30:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DiskUsageTest.java:156: warning: [deprecation] newInstance() in Class has been deprecated
01:30:42         final IObject link = linkClass.newInstance();
01:30:42                                       ^
01:30:42   where T is a type-variable:
01:30:42     T extends Object declared in class Class
01:30:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DuplicationTest.java:1332: warning: [deprecation] newInstance() in Class has been deprecated
01:30:43             originalLink.setChild(annotationClass.newInstance());
01:30:43                                                  ^
01:30:43   where T is a type-variable:
01:30:43     T extends Object declared in class Class
01:30:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ImporterTest.java:1088: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
01:30:43         RoiResult r = svc.findByImage(id, new RoiOptions());
01:30:43                          ^
01:30:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:30:44         final RawAccessRequest request = new RawAccessRequest();
01:30:44               ^
01:30:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:30:44         final RawAccessRequest request = new RawAccessRequest();
01:30:44                                              ^
01:30:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:901: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
01:30:44         request.repoUuid = repo.root().getHash().getValue();
01:30:44                ^
01:30:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:902: warning: [deprecation] command in RawAccessRequest has been deprecated
01:30:44         request.command = "exists";
01:30:44                ^
01:30:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:903: warning: [deprecation] args in RawAccessRequest has been deprecated
01:30:44         request.args = Collections.singletonList(dirPath);
01:30:44                ^
01:30:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:30:44         final RawAccessRequest request = new RawAccessRequest();
01:30:44               ^
01:30:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:30:44         final RawAccessRequest request = new RawAccessRequest();
01:30:44                                              ^
01:30:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:940: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
01:30:44         request.repoUuid = repo.root().getHash().getValue();
01:30:44                ^
01:30:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:941: warning: [deprecation] command in RawAccessRequest has been deprecated
01:30:44         request.command = "exists";
01:30:44                ^
01:30:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:942: warning: [deprecation] args in RawAccessRequest has been deprecated
01:30:44         request.args = Collections.singletonList(dirName);
01:30:44                ^
01:30:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJob in omero.model has been deprecated
01:30:44         final ImportJob importJob = new ImportJobI();
01:30:44               ^
01:30:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJobI in omero.model has been deprecated
01:30:44         final ImportJob importJob = new ImportJobI();
01:30:44                                         ^
01:30:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:266: warning: [deprecation] setImageName(RString) in ImportJob has been deprecated
01:30:44         importJob.setImageName(omero.rtypes.rstring(name));
01:30:44                  ^
01:30:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:268: warning: [deprecation] setImageDescription(RString) in ImportJob has been deprecated
01:30:44         importJob.setImageDescription(omero.rtypes.rstring(desc));
01:30:44                  ^
01:30:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
01:30:44         ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
01:30:44         ^
01:30:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
01:30:44         ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
01:30:44                           ^
01:30:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:274: warning: [deprecation] getImageName() in ImportJob has been deprecated
01:30:44         final String savedName = sent.getImageName().getValue().toString();
01:30:44                                      ^
01:30:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:275: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
01:30:44         final String savedDesc = sent.getImageDescription().getValue().toString();
01:30:44                                      ^
01:30:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
01:30:44         final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
01:30:44               ^
01:30:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
01:30:44         final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
01:30:44                                               ^
01:30:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:278: warning: [deprecation] getImageName() in ImportJob has been deprecated
01:30:44         final String retrievedName = retrievedImportJob.getImageName().getValue().toString();
01:30:44                                                        ^
01:30:44 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:279: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
01:30:44         final String retrievedDesc = retrievedImportJob.getImageDescription().getValue().toString();
01:30:44                                                        ^
01:30:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:141: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
01:30:45         RoiResult r = svc.findByImage(image.getId().getValue(),
01:30:45                          ^
01:30:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:190: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:30:45         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
01:30:45                                 ^
01:30:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:220: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:30:45         l = svc.getRoiMeasurements(image.getId().getValue(), options);
01:30:45                ^
01:30:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:241: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:30:45         l = svc.getRoiMeasurements(image.getId().getValue(), options);
01:30:45                ^
01:30:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:313: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:30:45         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
01:30:45                                 ^
01:30:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:320: warning: [deprecation] getMeasuredRoisMap(long,List<Long>,RoiOptions) in IRoiPrx has been deprecated
01:30:45         Map<Long, RoiResult> values = svc.getMeasuredRoisMap(image.getId()
01:30:45                                          ^
01:30:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:386: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:30:45         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
01:30:45                                 ^
01:30:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:390: warning: [deprecation] getTable(long) in IRoiPrx has been deprecated
01:30:45         table = svc.getTable(f.getId().getValue());
01:30:45                    ^
01:30:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:412: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
01:30:45         RoiResult r = svc.findByImage(image.getId().getValue(),
01:30:45                          ^
01:30:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:426: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
01:30:45         r = svc.findByRoi(r1.getId().getValue(), new RoiOptions());
01:30:45                ^
01:30:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:437: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
01:30:45         r = svc.findByRoi(r2.getId().getValue(), new RoiOptions());
01:30:45                ^
01:30:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:448: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
01:30:45         r = svc.findByPlane(image.getId().getValue(), 1, 0, new RoiOptions());
01:30:45                ^
01:30:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:459: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
01:30:45         r = svc.findByPlane(image.getId().getValue(), 1, 1, new RoiOptions());
01:30:45                ^
01:30:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:30:45             null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
01:30:45                   ^
01:30:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:30:45             null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
01:30:45                                   ^
01:30:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:30:45             new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
01:30:45                                    ^
01:30:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:30:45             new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
01:30:45                                                    ^
01:30:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [removal] Long(long) in Long has been deprecated and marked for removal
01:30:45             Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
01:30:45                                       ^
01:30:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:30:45             Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
01:30:45                                                        ^
01:30:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:30:45             Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
01:30:45                                                                        ^
01:30:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:30:45         inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
01:30:45                                        ^
01:30:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:30:45         inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
01:30:45                                                         ^
01:30:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:30:45         inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
01:30:45                                        ^
01:30:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:30:45         inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
01:30:45                                                        ^
01:30:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:30:45         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
01:30:45                                        ^
01:30:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:30:45         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
01:30:45                                                        ^
01:30:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:30:45         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
01:30:45                                        ^
01:30:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:30:45         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
01:30:45                                                        ^
01:30:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:30:45         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
01:30:45                                        ^
01:30:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:30:45         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
01:30:45                                                        ^
01:30:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:755: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
01:30:45                 svc.getShapeStatsRestricted(
01:30:45                    ^
01:30:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:764: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
01:30:45         final ShapeStats [] stats = svc.getShapeStatsRestricted(ids, 0, 0, new int[] {0});
01:30:45                                        ^
01:30:45 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveTest.java:1030: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
01:30:45         projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
01:30:45                                      ^
01:30:46 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:478: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
01:30:46         request.typesToIgnore = Collections.singletonList("TagAnnotation");
01:30:46                ^
01:30:46 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:495: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
01:30:46         request.typesToIgnore = Collections.singletonList("IAnnotationLink");
01:30:46                ^
01:30:46 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:501: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
01:30:46         request.typesToIgnore = Collections.singletonList("Annotation");
01:30:46                ^
01:30:46 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:547: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
01:30:46                     request.typesToIgnore = Collections.singletonList("Annotation");
01:30:46                            ^
01:30:46 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/HierarchyDeleteTest.java:537: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
01:30:46         projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
01:30:46                                      ^
01:30:46 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:37: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
01:30:46         p2.setRelatedTo(p1);
01:30:46           ^
01:30:46 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:39: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
01:30:46         Assert.assertEquals(p1.getId(), p2.getRelatedTo().getId());
01:30:46                                           ^
01:30:46 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:66: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
01:30:46         pixels1.setRelatedTo(pixels2);
01:30:46                ^
01:30:46 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:68: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
01:30:46         Pixels pixels = pixels1.getRelatedTo();
01:30:46                                ^
01:30:46 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:88: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
01:30:46         Assert.assertNull(pixels1.getRelatedTo());
01:30:46                                  ^
01:30:46 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:106: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
01:30:46         pixels1.setRelatedTo(pixels2);
01:30:46                ^
01:30:46 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:108: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
01:30:46         Pixels pixels = pixels1.getRelatedTo();
01:30:46                                ^
01:30:46 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:128: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
01:30:46         Assert.assertNull(pixels1.getRelatedTo());
01:30:46                                  ^
01:30:46 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:113: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:30:46         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
01:30:46                                 ^
01:30:46 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:147: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:30:46         l = svc.getRoiMeasurements(image.getId().getValue(), options);
01:30:46                ^
01:30:46 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:186: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:30:46         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
01:30:46                                 ^
01:30:46 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:221: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:30:46         l = svc.getRoiMeasurements(image.getId().getValue(), options);
01:30:46                ^
01:30:46 Note: Some input files use unchecked or unsafe operations.
01:30:46 Note: Recompile with -Xlint:unchecked for details.
01:30:46 91 warnings
01:30:47 Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/_omero_build_1580171469.tmp
01:30:47 Building jar: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/OmeroJava-test.jar
01:30:47 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:30:47 :: delivering :: omero#OmeroJava-test;working@efd076742dd1 :: 5.6.3-637-6d5491b192-ice36-b19 :: integration :: Fri Jul 24 01:30:14 UTC 2026
01:30:47 	delivering ivy file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/OmeroJava-test.xml
01:30:47 :: publishing :: omero#OmeroJava-test
01:30:47 	published OmeroJava-test to /home/omero/workspace/OMERO-build/src/target/test-repository/OmeroJava-test-5.6.3-637-6d5491b192-ice36-b19.jar
01:30:48 	published ivy to /home/omero/workspace/OMERO-build/src/target/test-repository/OmeroJava-test-5.6.3-637-6d5491b192-ice36-b19.xml
01:30:48 
01:30:48 build-eclipse:
01:30:48 No sub-builds to iterate on
01:30:49 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
01:30:49 
01:30:49 retrieve:
01:30:49 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
01:30:49 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:30:56 
01:30:56 prepare:
01:30:56 Preparing: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs
01:31:02 
01:31:02 release-clients:
01:31:02 Building zip: /home/omero/workspace/OMERO-build/src/target/OMERO.java-5.6.3-637-6d5491b192-ice36-b19.zip
01:31:08 
01:31:08 release-zip:
01:31:08 Building zip: /home/omero/workspace/OMERO-build/src/target/OMERO.server-5.6.3-637-6d5491b192-ice36-b19.zip
01:31:21 
01:31:21 BUILD SUCCESSFUL
01:31:21 Total time: 3 minutes 45 seconds
01:31:21 ++ '[' -d .git ']'
01:31:21 ++ python3 ./build.py release-src
01:31:21 Buildfile: /home/omero/workspace/OMERO-build/src/build.xml
01:31:22 
01:31:22 release-src-git:
01:31:22 Releasing openmicroscopy-5.6.3-637-6d5491b192-ice36-b19
01:31:24   - creating /home/omero/workspace/OMERO-build/src/target/openmicroscopy-5.6.3-637-6d5491b192-ice36-b19.zip
01:31:24   - repacking /home/omero/workspace/OMERO-build/src/target/openmicroscopy-5.6.3-637-6d5491b192-ice36-b19-base.zip
01:31:26 
01:31:26 BUILD SUCCESSFUL
01:31:26 Total time: 4 seconds
01:31:26 ++ echo BUILD_NUMBER=19
01:31:26 ++ echo OMERO_BRANCH=merge_ci
01:31:26 ++ git_info
01:31:26 +++ git rev-parse HEAD
01:31:26 ++ HEAD=6d5491b19236ddb5f81a0098fb53f42addb78782
01:31:26 ++ git log --max-count=1 6d5491b19236ddb5f81a0098fb53f42addb78782
01:31:26 ++ env
01:31:26 ++ sort
01:31:26 Archiving artifacts
01:31:43 Finished: SUCCESS