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01:19:23 Started by upstream project "Trigger" build number 29
01:19:23 originally caused by:
01:19:23  Started by timer
01:19:23 Running as SYSTEM
01:19:23 Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-build
01:19:23 The recommended git tool is: NONE
01:19:23 No credentials specified
01:19:23  > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-build/src/.git # timeout=10
01:19:24 Fetching changes from the remote Git repository
01:19:24  > git config remote.origin.url https://github.com/snoopycrimecop/openmicroscopy.git # timeout=10
01:19:24 Fetching upstream changes from https://github.com/snoopycrimecop/openmicroscopy.git
01:19:24  > git --version # timeout=10
01:19:24  > git --version # 'git version 2.52.0'
01:19:24  > git fetch --tags --force --progress -- https://github.com/snoopycrimecop/openmicroscopy.git +refs/heads/*:refs/remotes/origin/* # timeout=30
01:19:27  > git rev-parse origin/merge_ci^{commit} # timeout=10
01:19:27 Checking out Revision a13857391e6470d917921d05157984b49f4a0aab (origin/merge_ci)
01:19:27  > git config core.sparsecheckout # timeout=10
01:19:27  > git checkout -f a13857391e6470d917921d05157984b49f4a0aab # timeout=10
01:19:30 Commit message: "Add version.properties to etc/omero.properties"
01:19:30  > git rev-list --no-walk 6d5491b19236ddb5f81a0098fb53f42addb78782 # timeout=10
01:19:30 Cleaning workspace
01:19:30  > git rev-parse --verify HEAD # timeout=10
01:19:30 Resetting working tree
01:19:30  > git reset --hard # timeout=10
01:19:31  > git clean -fdx # timeout=10
01:20:00 Copied 6 artifacts from "OMERO-python-superbuild-build" build number 18
01:20:00 [OMERO-build] $ /bin/bash -xe /tmp/jenkins16796257394322727112.sh
01:20:00 + mv omero-scripts/dist/omero_scripts-5.10.1.dev0.tar.gz .
01:20:00 + cd src
01:20:00 + export OMERO_BRANCH=merge_ci
01:20:00 + OMERO_BRANCH=merge_ci
01:20:00 + OMERO_VEN=/home/omero/workspace/OMERO-build/omero-virtualenv
01:20:00 + rm -rf /home/omero/workspace/OMERO-build/omero-virtualenv
01:20:30 + source /home/omero/settings.env
01:20:30 ++ OMERO_DB_HOST=pg
01:20:30 ++ OMERO_DB_USER=postgres
01:20:30 ++ OMERO_DB_PASS=
01:20:30 ++ OMERO_ROOT_PASS=omero
01:20:30 ++ OMERO_DATA_DIR=/OMERO
01:20:30 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
01:20:30 + python3.11 -m venv /home/omero/workspace/OMERO-build/omero-virtualenv
01:20:49 + /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl
01:20:50 Collecting zeroc-ice==3.6.5
01:20:50   Downloading https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl (37.3 MB)
01:20:53      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 37.3/37.3 MB 10.7 MB/s eta 0:00:00
01:20:53 Installing collected packages: zeroc-ice
01:20:57 Successfully installed zeroc-ice-3.6.5
01:20:57 
01:20:57 [notice] A new release of pip available: 22.3.1 -> 26.1.2
01:20:57 [notice] To update, run: python3.11 -m pip install --upgrade pip
01:20:57 + /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install -U 'setuptools<66' omero-py
01:20:58 Requirement already satisfied: setuptools<66 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages (65.5.1)
01:20:58 Collecting setuptools<66
01:20:58   Using cached setuptools-65.7.0-py3-none-any.whl (1.2 MB)
01:20:59 Collecting omero-py
01:20:59   Using cached omero_py-5.22.1-py3-none-any.whl (2.8 MB)
01:20:59 Collecting appdirs
01:20:59   Using cached appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB)
01:20:59 Collecting future
01:20:59   Using cached future-1.0.0-py3-none-any.whl (491 kB)
01:21:00 Collecting numpy<3,>=2
01:21:00   Using cached numpy-2.4.6-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (16.9 MB)
01:21:00 Collecting Pillow>=10.0.0
01:21:00   Using cached pillow-12.3.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (6.9 MB)
01:21:01 Collecting PyYAML
01:21:01   Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB)
01:21:01 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages (from omero-py) (3.6.5)
01:21:01 Collecting requests
01:21:01   Using cached requests-2.34.2-py3-none-any.whl (73 kB)
01:21:01 Collecting portalocker
01:21:01   Using cached portalocker-3.2.0-py3-none-any.whl (22 kB)
01:21:01 Collecting charset_normalizer<4,>=2
01:21:02   Using cached charset_normalizer-3.4.9-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (221 kB)
01:21:02 Collecting idna<4,>=2.5
01:21:02   Using cached idna-3.18-py3-none-any.whl (65 kB)
01:21:02 Collecting urllib3<3,>=1.26
01:21:02   Using cached urllib3-2.7.0-py3-none-any.whl (131 kB)
01:21:02 Collecting certifi>=2023.5.7
01:21:02   Using cached certifi-2026.7.22-py3-none-any.whl (136 kB)
01:21:02 Installing collected packages: appdirs, urllib3, setuptools, PyYAML, portalocker, Pillow, numpy, idna, future, charset_normalizer, certifi, requests, omero-py
01:21:03   Attempting uninstall: setuptools
01:21:03     Found existing installation: setuptools 65.5.1
01:21:04     Uninstalling setuptools-65.5.1:
01:21:04       Successfully uninstalled setuptools-65.5.1
01:21:53 Successfully installed Pillow-12.3.0 PyYAML-6.0.3 appdirs-1.4.4 certifi-2026.7.22 charset_normalizer-3.4.9 future-1.0.0 idna-3.18 numpy-2.4.6 omero-py-5.22.1 portalocker-3.2.0 requests-2.34.2 setuptools-65.7.0 urllib3-2.7.0
01:21:53 
01:21:53 [notice] A new release of pip available: 22.3.1 -> 26.1.2
01:21:53 [notice] To update, run: python3.11 -m pip install --upgrade pip
01:21:53 + source /home/omero/workspace/OMERO-build/omero-virtualenv/bin/activate
01:21:53 ++ deactivate nondestructive
01:21:53 ++ '[' -n '' ']'
01:21:53 ++ '[' -n '' ']'
01:21:53 ++ hash -r
01:21:53 ++ '[' -n '' ']'
01:21:53 ++ unset VIRTUAL_ENV
01:21:53 ++ unset VIRTUAL_ENV_PROMPT
01:21:53 ++ '[' '!' nondestructive = nondestructive ']'
01:21:53 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-build/omero-virtualenv
01:21:53 ++ export VIRTUAL_ENV
01:21:53 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
01:21:53 ++ PATH=/home/omero/workspace/OMERO-build/omero-virtualenv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
01:21:53 ++ export PATH
01:21:53 ++ '[' -n '' ']'
01:21:53 ++ '[' -z '' ']'
01:21:53 ++ _OLD_VIRTUAL_PS1=
01:21:53 ++ PS1='(omero-virtualenv) '
01:21:53 ++ export PS1
01:21:53 ++ VIRTUAL_ENV_PROMPT='(omero-virtualenv) '
01:21:53 ++ export VIRTUAL_ENV_PROMPT
01:21:53 ++ hash -r
01:21:53 + source docs/hudson/OMERO.sh
01:21:53 ++ set -e
01:21:53 ++ set -u
01:21:53 ++ set -x
01:21:53 ++ source docs/hudson/functions.sh
01:21:53 ++ echo Building merge_ci
01:21:53 Building merge_ci
01:21:53 ++ python3 ./build.py build-dev release-all
01:21:53 Buildfile: /home/omero/workspace/OMERO-build/src/build.xml
01:21:54 
01:21:54 check-ivy:
01:21:54 Creating /home/omero/workspace/OMERO-build/src/etc/local.properties
01:21:54 Created dir: /home/omero/workspace/OMERO-build/src/target
01:21:55 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
01:21:55 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:21:56 
01:21:56 build-scons:
01:21:56 Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
01:21:58 No sub-builds to iterate on
01:21:58 Entering /home/omero/workspace/OMERO-build/src/components/tools...
01:21:59 
01:21:59 buildlist:
01:21:59 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
01:21:59 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:21:59 
01:21:59 clean:
01:21:59 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
01:21:59 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
01:22:00 
01:22:00 python-clean:
01:22:00 WARNING: '' not a valid package name; please use only .-separated package names in setup.py
01:22:00 /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages/setuptools/dist.py:543: UserWarning: The version specified ('5.6.3-637-a13857391e-ice36-b20') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
01:22:00   warnings.warn(
01:22:00 running clean
01:22:00 Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb/omero_version.py
01:22:00 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
01:22:01 
01:22:01 python-clean:
01:22:01 WARNING: '' not a valid package name; please use only .-separated package names in setup.py
01:22:01 /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages/setuptools/dist.py:543: UserWarning: The version specified ('5.6.3-637-a13857391e-ice36-b20') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
01:22:01   warnings.warn(
01:22:01 running clean
01:22:01 Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS/omero_version.py
01:22:01 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
01:22:02 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
01:22:02 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
01:22:02 
01:22:02 python-clean:
01:22:02 WARNING: '' not a valid package name; please use only .-separated package names in setup.py
01:22:02 /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages/setuptools/dist.py:543: UserWarning: The version specified ('5.6.3-637-a13857391e-ice36-b20') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
01:22:02   warnings.warn(
01:22:02 running clean
01:22:02 Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy/omero_version.py
01:22:02 Deleting directory /home/omero/workspace/OMERO-build/src/target
01:22:03 
01:22:03 build-scons:
01:22:03 Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
01:22:05 
01:22:05 build:
01:22:05 No sub-builds to iterate on
01:22:05 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
01:22:05 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
01:22:06 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
01:22:06 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
01:22:06 
01:22:06 tools-init:
01:22:06 no-op
01:22:07 
01:22:07 retrieve:
01:22:07 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
01:22:07 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:23:30 
01:23:30 prepare:
01:23:30 Preparing: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs
01:23:30 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/.done
01:23:30 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/src
01:23:30 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
01:23:30 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
01:23:30 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
01:23:30 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/reports
01:23:30 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
01:23:30 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
01:23:30 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
01:23:30 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
01:23:30 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
01:23:30 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
01:23:30 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
01:23:31 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
01:23:31 
01:23:31 pre-compile:
01:23:31 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/glacier2.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
01:23:32 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ice.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
01:23:40 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icegrid.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
01:23:44 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icestorm.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
01:23:45 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ome-xml.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
01:23:47 
01:23:47 compile:
01:23:47 no-op
01:23:47 
01:23:47 package:
01:23:47 Building jar: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/omero_client.jar
01:23:52 
01:23:52 install:
01:23:52 :: delivering :: omero#omero_client;working@efd076742dd1 :: 5.6.3-637-a13857391e-ice36-b20 :: integration :: Sat Jul 25 01:22:06 UTC 2026
01:23:52 	delivering ivy file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/ivy.xml
01:23:52 :: publishing :: omero#omero_client
01:23:52 	published omero_client to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-637-a13857391e-ice36-b20/omero_client-5.6.3-637-a13857391e-ice36-b20.jar
01:23:52 	published ivy to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-637-a13857391e-ice36-b20/omero_client-5.6.3-637-a13857391e-ice36-b20.xml
01:23:53 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
01:23:53 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
01:23:53 
01:23:53 retrieve:
01:23:53 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
01:23:53 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:23:54 Entering /home/omero/workspace/OMERO-build/src/components/tools...
01:23:54 
01:23:54 dist:
01:23:54 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/service-classes/META-INF
01:23:54 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/lib/server
01:23:54 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
01:23:54 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts/omero_scripts-5.10.1.dev0.tar.gz into /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
01:23:55 Copying 29 files to /home/omero/workspace/OMERO-build/src/components/tools/target/lib/scripts
01:23:55 Copying 29 files to /home/omero/workspace/OMERO-build/src/dist
01:23:55 Copied 9 empty directories to 1 empty directory under /home/omero/workspace/OMERO-build/src/dist
01:23:56 Entering /home/omero/workspace/OMERO-build/src/components/tests...
01:23:56 Entering /home/omero/workspace/OMERO-build/src/components/tests/ui...
01:23:57 
01:23:57 copy-licenses:
01:23:57 Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
01:23:57 Created dir: /home/omero/workspace/OMERO-build/src/dist/share
01:23:57 Copying 44 files to /home/omero/workspace/OMERO-build/src/dist/share
01:23:58 
01:23:58 copy-history:
01:23:58 Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
01:23:58 
01:23:58 copy-etc:
01:23:58 Copying 28 files to /home/omero/workspace/OMERO-build/src/dist/etc
01:23:58 Copying 1 file to /home/omero/workspace/OMERO-build/src/dist/etc/templates
01:23:59 
01:23:59 copy-sql:
01:23:59 Copying 60 files to /home/omero/workspace/OMERO-build/src/dist
01:24:11 
01:24:11 copy-server:
01:24:11 	conflict on /home/omero/workspace/OMERO-build/src/dist/lib/server/janino.jar in [server]: 3.1.9 won
01:24:16 
01:24:16 copy-client:
01:24:16 Created dir: /home/omero/workspace/OMERO-build/src/dist/lib/client
01:24:20 	conflict on /home/omero/workspace/OMERO-build/src/dist/lib/client/janino.jar in [client]: 3.1.9 won
01:24:25 
01:24:25 update-version:
01:24:25 Copying 1 file to /home/omero/workspace/OMERO-build/src/dist/etc
01:24:25 
01:24:25 create-workdirs:
01:24:25 Created dir: /home/omero/workspace/OMERO-build/src/dist/etc/grid
01:24:25 Created dir: /home/omero/workspace/OMERO-build/src/dist/var
01:24:25 Created dir: /home/omero/workspace/OMERO-build/src/dist/var/tmp
01:24:25 
01:24:25 copy-luts:
01:24:25 Created dir: /home/omero/workspace/OMERO-build/src/dist/lib/scripts/luts
01:24:25 Copying 47 files to /home/omero/workspace/OMERO-build/src/dist/lib/scripts/luts
01:24:25 
01:24:25 test-compile:
01:24:25 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:24:26 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
01:24:26 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
01:24:26 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
01:24:26 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
01:24:27 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
01:24:27 Entering /home/omero/workspace/OMERO-build/src/components/tests/ui...
01:24:28 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
01:24:28 
01:24:28 testng-init:
01:24:28 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
01:24:28 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:24:36 01:24:36,481 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.16
01:24:36 01:24:36,484 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1492c9d - No custom configurators were discovered as a service.
01:24:36 01:24:36,484 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1492c9d - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
01:24:36 01:24:36,488 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1492c9d - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
01:24:36 01:24:36,492 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
01:24:36 01:24:36,495 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
01:24:36 01:24:36,496 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1492c9d - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 8 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
01:24:36 01:24:36,496 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1492c9d - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
01:24:36 01:24:36,498 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1492c9d - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
01:24:36 01:24:36,500 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
01:24:36 01:24:36,502 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes/logback.xml]
01:24:36 01:24:36,503 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@24df8abf - Resource [logback.xml] occurs multiple times on the classpath.
01:24:36 01:24:36,503 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@24df8abf - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes/logback.xml]
01:24:36 01:24:36,503 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@24df8abf - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources/logback.xml]
01:24:36 01:24:36,735 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stderr]
01:24:36 01:24:36,735 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
01:24:36 01:24:36,758 |-INFO in ch.qos.logback.core.model.processor.ImplicitModelHandler - Assuming default type [ch.qos.logback.classic.encoder.PatternLayoutEncoder] for [encoder] property
01:24:36 01:24:36,760 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@390d47db - As of version 1.2.0 "immediateFlush" property should be set within the enclosing Appender.
01:24:36 01:24:36,760 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@390d47db - Please move "immediateFlush" property into the enclosing appender.
01:24:36 01:24:36,833 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@390d47db - Setting the "immediateFlush" property of the enclosing appender to true
01:24:36 01:24:36,834 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [velocity] to ERROR
01:24:36 01:24:36,834 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [org] to ERROR
01:24:36 01:24:36,834 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [ome] to ERROR
01:24:36 01:24:36,834 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci] to ERROR
01:24:36 01:24:36,834 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to WARN
01:24:36 01:24:36,834 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stderr] to Logger[ROOT]
01:24:36 01:24:36,835 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@6aa09c35 - End of configuration.
01:24:36 01:24:36,838 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@22457838 - Registering current configuration as safe fallback point
01:24:36 01:24:36,838 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1492c9d - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 340 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
01:24:36 
01:24:36 lifecycle.test-compile:
01:24:36 Copying 3 files to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
01:24:36 Compiling 85 source files to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
01:24:37 warning: [options] bootstrap class path not set in conjunction with -source 8
01:24:37 warning: [options] source value 8 is obsolete and will be removed in a future release
01:24:37 warning: [options] target value 8 is obsolete and will be removed in a future release
01:24:37 warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
01:24:39 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/AbstractServerTest.java:61: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:24:39 import omero.grid.RawAccessRequest;
01:24:39                  ^
01:24:39 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:32: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:24:39 import omero.grid.RawAccessRequest;
01:24:39                  ^
01:24:39 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:53: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:24:39 import omero.grid.RawAccessRequest;
01:24:39                  ^
01:24:39 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:31: warning: [deprecation] ImportJob in omero.model has been deprecated
01:24:39 import omero.model.ImportJob;
01:24:39                   ^
01:24:39 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:32: warning: [deprecation] ImportJobI in omero.model has been deprecated
01:24:39 import omero.model.ImportJobI;
01:24:39                   ^
01:24:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ModelMockFactory.java:1206: warning: [deprecation] newInstance() in Class has been deprecated
01:24:40         IObject link = (IObject) linkClass.newInstance();
01:24:40                                           ^
01:24:40   where T is a type-variable:
01:24:40     T extends Object declared in class Class
01:24:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/CreatePojosFixture2.java:269: warning: [deprecation] newInstance() in Class has been deprecated
01:24:40         T copy = (T) obj.getClass().newInstance();
01:24:40                                    ^
01:24:40   where T is a type-variable:
01:24:40     T extends Object declared in class Class
01:24:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:24:40         RawAccessRequest raw = new RawAccessRequest();
01:24:40         ^
01:24:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:24:40         RawAccessRequest raw = new RawAccessRequest();
01:24:40                                    ^
01:24:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:419: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
01:24:40         raw.repoUuid = legacy.root().getHash().getValue();
01:24:40            ^
01:24:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:420: warning: [deprecation] command in RawAccessRequest has been deprecated
01:24:40         raw.command = "rm";
01:24:40            ^
01:24:40 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:421: warning: [deprecation] args in RawAccessRequest has been deprecated
01:24:40         raw.args = Arrays.asList(path);
01:24:40            ^
01:24:41 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DiskUsageTest.java:156: warning: [deprecation] newInstance() in Class has been deprecated
01:24:41         final IObject link = linkClass.newInstance();
01:24:41                                       ^
01:24:41   where T is a type-variable:
01:24:41     T extends Object declared in class Class
01:24:41 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DuplicationTest.java:1332: warning: [deprecation] newInstance() in Class has been deprecated
01:24:41             originalLink.setChild(annotationClass.newInstance());
01:24:41                                                  ^
01:24:41   where T is a type-variable:
01:24:41     T extends Object declared in class Class
01:24:41 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ImporterTest.java:1088: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
01:24:41         RoiResult r = svc.findByImage(id, new RoiOptions());
01:24:41                          ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:24:42         final RawAccessRequest request = new RawAccessRequest();
01:24:42               ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:24:42         final RawAccessRequest request = new RawAccessRequest();
01:24:42                                              ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:901: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
01:24:42         request.repoUuid = repo.root().getHash().getValue();
01:24:42                ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:902: warning: [deprecation] command in RawAccessRequest has been deprecated
01:24:42         request.command = "exists";
01:24:42                ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:903: warning: [deprecation] args in RawAccessRequest has been deprecated
01:24:42         request.args = Collections.singletonList(dirPath);
01:24:42                ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:24:42         final RawAccessRequest request = new RawAccessRequest();
01:24:42               ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:24:42         final RawAccessRequest request = new RawAccessRequest();
01:24:42                                              ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:940: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
01:24:42         request.repoUuid = repo.root().getHash().getValue();
01:24:42                ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:941: warning: [deprecation] command in RawAccessRequest has been deprecated
01:24:42         request.command = "exists";
01:24:42                ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:942: warning: [deprecation] args in RawAccessRequest has been deprecated
01:24:42         request.args = Collections.singletonList(dirName);
01:24:42                ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJob in omero.model has been deprecated
01:24:42         final ImportJob importJob = new ImportJobI();
01:24:42               ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJobI in omero.model has been deprecated
01:24:42         final ImportJob importJob = new ImportJobI();
01:24:42                                         ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:266: warning: [deprecation] setImageName(RString) in ImportJob has been deprecated
01:24:42         importJob.setImageName(omero.rtypes.rstring(name));
01:24:42                  ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:268: warning: [deprecation] setImageDescription(RString) in ImportJob has been deprecated
01:24:42         importJob.setImageDescription(omero.rtypes.rstring(desc));
01:24:42                  ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
01:24:42         ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
01:24:42         ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
01:24:42         ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
01:24:42                           ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:274: warning: [deprecation] getImageName() in ImportJob has been deprecated
01:24:42         final String savedName = sent.getImageName().getValue().toString();
01:24:42                                      ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:275: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
01:24:42         final String savedDesc = sent.getImageDescription().getValue().toString();
01:24:42                                      ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
01:24:42         final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
01:24:42               ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
01:24:42         final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
01:24:42                                               ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:278: warning: [deprecation] getImageName() in ImportJob has been deprecated
01:24:42         final String retrievedName = retrievedImportJob.getImageName().getValue().toString();
01:24:42                                                        ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:279: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
01:24:42         final String retrievedDesc = retrievedImportJob.getImageDescription().getValue().toString();
01:24:42                                                        ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:141: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
01:24:42         RoiResult r = svc.findByImage(image.getId().getValue(),
01:24:42                          ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:190: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:24:42         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
01:24:42                                 ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:220: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:24:42         l = svc.getRoiMeasurements(image.getId().getValue(), options);
01:24:42                ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:241: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:24:42         l = svc.getRoiMeasurements(image.getId().getValue(), options);
01:24:42                ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:313: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:24:42         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
01:24:42                                 ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:320: warning: [deprecation] getMeasuredRoisMap(long,List<Long>,RoiOptions) in IRoiPrx has been deprecated
01:24:42         Map<Long, RoiResult> values = svc.getMeasuredRoisMap(image.getId()
01:24:42                                          ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:386: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:24:42         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
01:24:42                                 ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:390: warning: [deprecation] getTable(long) in IRoiPrx has been deprecated
01:24:42         table = svc.getTable(f.getId().getValue());
01:24:42                    ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:412: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
01:24:42         RoiResult r = svc.findByImage(image.getId().getValue(),
01:24:42                          ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:426: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
01:24:42         r = svc.findByRoi(r1.getId().getValue(), new RoiOptions());
01:24:42                ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:437: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
01:24:42         r = svc.findByRoi(r2.getId().getValue(), new RoiOptions());
01:24:42                ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:448: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
01:24:42         r = svc.findByPlane(image.getId().getValue(), 1, 0, new RoiOptions());
01:24:42                ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:459: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
01:24:42         r = svc.findByPlane(image.getId().getValue(), 1, 1, new RoiOptions());
01:24:42                ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:24:42             null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
01:24:42                   ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:24:42             null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
01:24:42                                   ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:24:42             new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
01:24:42                                    ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:24:42             new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
01:24:42                                                    ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [removal] Long(long) in Long has been deprecated and marked for removal
01:24:42             Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
01:24:42                                       ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:24:42             Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
01:24:42                                                        ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:24:42             Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
01:24:42                                                                        ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:24:42         inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
01:24:42                                        ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:24:42         inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
01:24:42                                                         ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:24:42         inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
01:24:42                                        ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:24:42         inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
01:24:42                                                        ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:24:42         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
01:24:42                                        ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:24:42         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
01:24:42                                                        ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:24:42         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
01:24:42                                        ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:24:42         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
01:24:42                                                        ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:24:42         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
01:24:42                                        ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:24:42         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
01:24:42                                                        ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:755: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
01:24:42                 svc.getShapeStatsRestricted(
01:24:42                    ^
01:24:42 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:764: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
01:24:42         final ShapeStats [] stats = svc.getShapeStatsRestricted(ids, 0, 0, new int[] {0});
01:24:42                                        ^
01:24:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveTest.java:1030: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
01:24:43         projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
01:24:43                                      ^
01:24:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:478: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
01:24:43         request.typesToIgnore = Collections.singletonList("TagAnnotation");
01:24:43                ^
01:24:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:495: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
01:24:43         request.typesToIgnore = Collections.singletonList("IAnnotationLink");
01:24:43                ^
01:24:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:501: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
01:24:43         request.typesToIgnore = Collections.singletonList("Annotation");
01:24:43                ^
01:24:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:547: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
01:24:43                     request.typesToIgnore = Collections.singletonList("Annotation");
01:24:43                            ^
01:24:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/HierarchyDeleteTest.java:537: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
01:24:43         projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
01:24:43                                      ^
01:24:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:37: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
01:24:43         p2.setRelatedTo(p1);
01:24:43           ^
01:24:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:39: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
01:24:43         Assert.assertEquals(p1.getId(), p2.getRelatedTo().getId());
01:24:43                                           ^
01:24:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:66: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
01:24:43         pixels1.setRelatedTo(pixels2);
01:24:43                ^
01:24:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:68: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
01:24:43         Pixels pixels = pixels1.getRelatedTo();
01:24:43                                ^
01:24:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:88: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
01:24:43         Assert.assertNull(pixels1.getRelatedTo());
01:24:43                                  ^
01:24:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:106: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
01:24:43         pixels1.setRelatedTo(pixels2);
01:24:43                ^
01:24:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:108: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
01:24:43         Pixels pixels = pixels1.getRelatedTo();
01:24:43                                ^
01:24:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:128: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
01:24:43         Assert.assertNull(pixels1.getRelatedTo());
01:24:43                                  ^
01:24:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:113: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:24:43         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
01:24:43                                 ^
01:24:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:147: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:24:43         l = svc.getRoiMeasurements(image.getId().getValue(), options);
01:24:43                ^
01:24:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:186: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:24:43         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
01:24:43                                 ^
01:24:43 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:221: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:24:43         l = svc.getRoiMeasurements(image.getId().getValue(), options);
01:24:43                ^
01:24:43 Note: Some input files use unchecked or unsafe operations.
01:24:43 Note: Recompile with -Xlint:unchecked for details.
01:24:43 91 warnings
01:24:43 Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/_omero_build_771897908.tmp
01:24:44 Building jar: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/OmeroJava-test.jar
01:24:44 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:24:44 :: delivering :: omero#OmeroJava-test;working@efd076742dd1 :: 5.6.3-637-a13857391e-ice36-b20 :: integration :: Sat Jul 25 01:24:27 UTC 2026
01:24:44 	delivering ivy file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/OmeroJava-test.xml
01:24:44 :: publishing :: omero#OmeroJava-test
01:24:44 	published OmeroJava-test to /home/omero/workspace/OMERO-build/src/target/test-repository/OmeroJava-test-5.6.3-637-a13857391e-ice36-b20.jar
01:24:44 	published ivy to /home/omero/workspace/OMERO-build/src/target/test-repository/OmeroJava-test-5.6.3-637-a13857391e-ice36-b20.xml
01:24:44 
01:24:44 build-eclipse:
01:24:44 No sub-builds to iterate on
01:24:44 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
01:24:45 
01:24:45 retrieve:
01:24:45 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
01:24:45 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:24:49 
01:24:49 prepare:
01:24:49 Preparing: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs
01:24:53 
01:24:53 release-clients:
01:24:53 Building zip: /home/omero/workspace/OMERO-build/src/target/OMERO.java-5.6.3-637-a13857391e-ice36-b20.zip
01:24:59 
01:24:59 release-zip:
01:24:59 Building zip: /home/omero/workspace/OMERO-build/src/target/OMERO.server-5.6.3-637-a13857391e-ice36-b20.zip
01:25:12 
01:25:12 BUILD SUCCESSFUL
01:25:12 Total time: 3 minutes 18 seconds
01:25:12 ++ '[' -d .git ']'
01:25:12 ++ python3 ./build.py release-src
01:25:12 Buildfile: /home/omero/workspace/OMERO-build/src/build.xml
01:25:13 
01:25:13 release-src-git:
01:25:13 Releasing openmicroscopy-5.6.3-637-a13857391e-ice36-b20
01:25:15   - creating /home/omero/workspace/OMERO-build/src/target/openmicroscopy-5.6.3-637-a13857391e-ice36-b20.zip
01:25:15   - repacking /home/omero/workspace/OMERO-build/src/target/openmicroscopy-5.6.3-637-a13857391e-ice36-b20-base.zip
01:25:16 
01:25:16 BUILD SUCCESSFUL
01:25:16 Total time: 4 seconds
01:25:16 ++ echo BUILD_NUMBER=20
01:25:16 ++ echo OMERO_BRANCH=merge_ci
01:25:16 ++ git_info
01:25:16 +++ git rev-parse HEAD
01:25:16 ++ HEAD=a13857391e6470d917921d05157984b49f4a0aab
01:25:16 ++ git log --max-count=1 a13857391e6470d917921d05157984b49f4a0aab
01:25:16 ++ env
01:25:16 ++ sort
01:25:16 Archiving artifacts
01:25:34 Finished: SUCCESS