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11:55:38 Started by upstream project "Trigger" build number 7
11:55:38 originally caused by:
11:55:38  Started by user devspace
11:55:38 Running as SYSTEM
11:55:38 Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-build
11:55:38 The recommended git tool is: NONE
11:55:38 No credentials specified
11:55:38  > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-build/src/.git # timeout=10
11:55:38 Fetching changes from the remote Git repository
11:55:38  > git config remote.origin.url https://github.com/snoopycrimecop/openmicroscopy.git # timeout=10
11:55:38 Fetching upstream changes from https://github.com/snoopycrimecop/openmicroscopy.git
11:55:38  > git --version # timeout=10
11:55:38  > git --version # 'git version 2.47.3'
11:55:38  > git fetch --tags --force --progress -- https://github.com/snoopycrimecop/openmicroscopy.git +refs/heads/*:refs/remotes/origin/* # timeout=30
11:55:38  > git rev-parse origin/merge_ci^{commit} # timeout=10
11:55:38 Checking out Revision 35efecc35fb2009188243bc7205356c6edf17230 (origin/merge_ci)
11:55:38  > git config core.sparsecheckout # timeout=10
11:55:38  > git checkout -f 35efecc35fb2009188243bc7205356c6edf17230 # timeout=10
11:55:38 Commit message: "Add version.properties to etc/omero.properties"
11:55:38  > git rev-list --no-walk 122592012bb64cff186dbd6e9dcc320fcec89c20 # timeout=10
11:55:38 Cleaning workspace
11:55:38  > git rev-parse --verify HEAD # timeout=10
11:55:38 Resetting working tree
11:55:38  > git reset --hard # timeout=10
11:55:38  > git clean -fdx # timeout=10
11:55:38 Copied 6 artifacts from "OMERO-python-superbuild-build" build number 3
11:55:39 [OMERO-build] $ /bin/bash -xe /tmp/jenkins218315429278136665.sh
11:55:39 + mv omero-scripts/dist/omero_scripts-5.9.2.dev0.tar.gz .
11:55:39 + cd src
11:55:39 + export OMERO_BRANCH=merge_ci
11:55:39 + OMERO_BRANCH=merge_ci
11:55:39 + OMERO_VEN=/home/omero/workspace/OMERO-build/omero-virtualenv
11:55:39 + rm -rf /home/omero/workspace/OMERO-build/omero-virtualenv
11:55:39 + source /home/omero/settings.env
11:55:39 ++ OMERO_DB_HOST=pg
11:55:39 ++ OMERO_DB_USER=postgres
11:55:39 ++ OMERO_DB_PASS=
11:55:39 ++ OMERO_ROOT_PASS=omero
11:55:39 ++ OMERO_DATA_DIR=/OMERO
11:55:39 ++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
11:55:39 + python3.11 -m venv /home/omero/workspace/OMERO-build/omero-virtualenv
11:55:42 + /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl
11:55:42 Collecting zeroc-ice==3.6.5
11:55:43   Downloading https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl (37.3 MB)
11:55:45      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 37.3/37.3 MB 17.8 MB/s eta 0:00:00
11:55:45 Installing collected packages: zeroc-ice
11:55:46 Successfully installed zeroc-ice-3.6.5
11:55:46 
11:55:46 [notice] A new release of pip available: 22.3.1 -> 25.3
11:55:46 [notice] To update, run: python3.11 -m pip install --upgrade pip
11:55:46 + /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install -U 'setuptools<66' omero-py
11:55:46 Requirement already satisfied: setuptools<66 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages (65.5.1)
11:55:46 Collecting setuptools<66
11:55:46   Using cached setuptools-65.7.0-py3-none-any.whl (1.2 MB)
11:55:46 Collecting omero-py
11:55:46   Using cached omero_py-5.21.3-py3-none-any.whl (2.8 MB)
11:55:46 Collecting appdirs
11:55:46   Using cached appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB)
11:55:47 Collecting future
11:55:47   Using cached future-1.0.0-py3-none-any.whl (491 kB)
11:55:47 Collecting numpy<3
11:55:47   Using cached numpy-2.3.5-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (16.9 MB)
11:55:48 Collecting Pillow>=10.0.0
11:55:48   Using cached pillow-12.0.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (7.0 MB)
11:55:48 Collecting PyYAML
11:55:48   Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB)
11:55:48 Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages (from omero-py) (3.6.5)
11:55:48 Collecting requests
11:55:48   Using cached requests-2.32.5-py3-none-any.whl (64 kB)
11:55:48 Collecting portalocker
11:55:48   Using cached portalocker-3.2.0-py3-none-any.whl (22 kB)
11:55:48 Collecting charset_normalizer<4,>=2
11:55:48   Using cached charset_normalizer-3.4.4-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (151 kB)
11:55:48 Collecting idna<4,>=2.5
11:55:48   Using cached idna-3.11-py3-none-any.whl (71 kB)
11:55:48 Collecting urllib3<3,>=1.21.1
11:55:48   Using cached urllib3-2.6.2-py3-none-any.whl (131 kB)
11:55:48 Collecting certifi>=2017.4.17
11:55:48   Using cached certifi-2025.11.12-py3-none-any.whl (159 kB)
11:55:48 Installing collected packages: appdirs, urllib3, setuptools, PyYAML, portalocker, Pillow, numpy, idna, future, charset_normalizer, certifi, requests, omero-py
11:55:49   Attempting uninstall: setuptools
11:55:49     Found existing installation: setuptools 65.5.1
11:55:49     Uninstalling setuptools-65.5.1:
11:55:49       Successfully uninstalled setuptools-65.5.1
11:55:54 Successfully installed Pillow-12.0.0 PyYAML-6.0.3 appdirs-1.4.4 certifi-2025.11.12 charset_normalizer-3.4.4 future-1.0.0 idna-3.11 numpy-2.3.5 omero-py-5.21.3 portalocker-3.2.0 requests-2.32.5 setuptools-65.7.0 urllib3-2.6.2
11:55:54 
11:55:54 [notice] A new release of pip available: 22.3.1 -> 25.3
11:55:54 [notice] To update, run: python3.11 -m pip install --upgrade pip
11:55:54 + source /home/omero/workspace/OMERO-build/omero-virtualenv/bin/activate
11:55:54 ++ deactivate nondestructive
11:55:54 ++ '[' -n '' ']'
11:55:54 ++ '[' -n '' ']'
11:55:54 ++ hash -r
11:55:54 ++ '[' -n '' ']'
11:55:54 ++ unset VIRTUAL_ENV
11:55:54 ++ unset VIRTUAL_ENV_PROMPT
11:55:54 ++ '[' '!' nondestructive = nondestructive ']'
11:55:54 ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-build/omero-virtualenv
11:55:54 ++ export VIRTUAL_ENV
11:55:54 ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
11:55:54 ++ PATH=/home/omero/workspace/OMERO-build/omero-virtualenv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
11:55:54 ++ export PATH
11:55:54 ++ '[' -n '' ']'
11:55:54 ++ '[' -z '' ']'
11:55:54 ++ _OLD_VIRTUAL_PS1=
11:55:54 ++ PS1='(omero-virtualenv) '
11:55:54 ++ export PS1
11:55:54 ++ VIRTUAL_ENV_PROMPT='(omero-virtualenv) '
11:55:54 ++ export VIRTUAL_ENV_PROMPT
11:55:54 ++ hash -r
11:55:54 + source docs/hudson/OMERO.sh
11:55:54 ++ set -e
11:55:54 ++ set -u
11:55:54 ++ set -x
11:55:54 ++ source docs/hudson/functions.sh
11:55:54 ++ echo Building merge_ci
11:55:54 Building merge_ci
11:55:54 ++ python3 ./build.py build-dev release-all
11:55:54 Buildfile: /home/omero/workspace/OMERO-build/src/build.xml
11:55:55 
11:55:55 check-ivy:
11:55:55 Creating /home/omero/workspace/OMERO-build/src/etc/local.properties
11:55:55 Created dir: /home/omero/workspace/OMERO-build/src/target
11:55:55 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
11:55:55 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
11:55:55 
11:55:55 build-scons:
11:55:55 Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
11:55:55 No sub-builds to iterate on
11:55:56 Entering /home/omero/workspace/OMERO-build/src/components/tools...
11:55:56 
11:55:56 buildlist:
11:55:56 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
11:55:56 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
11:55:56 
11:55:56 clean:
11:55:56 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
11:55:56 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
11:55:56 
11:55:56 python-clean:
11:55:56 WARNING: '' not a valid package name; please use only .-separated package names in setup.py
11:55:56 /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages/setuptools/dist.py:543: UserWarning: The version specified ('5.6.3-576-35efecc35f-ice36-b3') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
11:55:56   warnings.warn(
11:55:56 running clean
11:55:56 Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb/omero_version.py
11:55:56 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
11:55:57 
11:55:57 python-clean:
11:55:57 WARNING: '' not a valid package name; please use only .-separated package names in setup.py
11:55:57 /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages/setuptools/dist.py:543: UserWarning: The version specified ('5.6.3-576-35efecc35f-ice36-b3') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
11:55:57   warnings.warn(
11:55:57 running clean
11:55:57 Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS/omero_version.py
11:55:57 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
11:55:57 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
11:55:57 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
11:55:57 
11:55:57 python-clean:
11:55:57 WARNING: '' not a valid package name; please use only .-separated package names in setup.py
11:55:57 /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages/setuptools/dist.py:543: UserWarning: The version specified ('5.6.3-576-35efecc35f-ice36-b3') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
11:55:57   warnings.warn(
11:55:57 running clean
11:55:57 Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy/omero_version.py
11:55:57 Deleting directory /home/omero/workspace/OMERO-build/src/target
11:55:57 
11:55:57 build-scons:
11:55:57 Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
11:55:57 
11:55:57 build:
11:55:57 No sub-builds to iterate on
11:55:57 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
11:55:57 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
11:55:57 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
11:55:57 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
11:55:57 
11:55:57 tools-init:
11:55:57 no-op
11:55:58 
11:55:58 retrieve:
11:55:58 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
11:55:58 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
11:55:58 WARNING: An illegal reflective access operation has occurred
11:55:58 WARNING: Illegal reflective access by org.apache.ivy.util.url.IvyAuthenticator (file:/home/omero/workspace/OMERO-build/src/lib/repository/ivy-2.4.0.jar) to field java.net.Authenticator.theAuthenticator
11:55:58 WARNING: Please consider reporting this to the maintainers of org.apache.ivy.util.url.IvyAuthenticator
11:55:58 WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
11:55:58 WARNING: All illegal access operations will be denied in a future release
11:56:46 
11:56:46 prepare:
11:56:46 Preparing: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs
11:56:46 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/.done
11:56:46 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/src
11:56:46 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
11:56:46 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
11:56:46 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
11:56:46 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/reports
11:56:46 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
11:56:46 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
11:56:46 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
11:56:46 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
11:56:46 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
11:56:46 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
11:56:46 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
11:56:46 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
11:56:46 
11:56:46 pre-compile:
11:56:46 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/glacier2.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
11:56:47 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ice.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
11:56:47 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icegrid.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
11:56:47 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icestorm.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
11:56:47 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ome-xml.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
11:56:47 
11:56:47 compile:
11:56:47 no-op
11:56:47 
11:56:47 package:
11:56:47 Building jar: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/omero_client.jar
11:56:47 
11:56:47 install:
11:56:47 :: delivering :: omero#omero_client;working@a7081cffa0b5 :: 5.6.3-576-35efecc35f-ice36-b3 :: integration :: Fri Dec 19 11:55:57 UTC 2025
11:56:47 	delivering ivy file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/ivy.xml
11:56:47 :: publishing :: omero#omero_client
11:56:47 	published omero_client to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-576-35efecc35f-ice36-b3/omero_client-5.6.3-576-35efecc35f-ice36-b3.jar
11:56:47 	published ivy to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-576-35efecc35f-ice36-b3/omero_client-5.6.3-576-35efecc35f-ice36-b3.xml
11:56:47 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
11:56:47 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
11:56:48 
11:56:48 retrieve:
11:56:48 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
11:56:48 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
11:56:48 Entering /home/omero/workspace/OMERO-build/src/components/tools...
11:56:48 
11:56:48 dist:
11:56:48 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/service-classes/META-INF
11:56:48 Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/lib/server
11:56:48 Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
11:56:48 Expanding: /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts/omero_scripts-5.9.2.dev0.tar.gz into /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
11:56:48 Copying 29 files to /home/omero/workspace/OMERO-build/src/components/tools/target/lib/scripts
11:56:48 Copying 29 files to /home/omero/workspace/OMERO-build/src/dist
11:56:48 Copied 9 empty directories to 1 empty directory under /home/omero/workspace/OMERO-build/src/dist
11:56:48 Entering /home/omero/workspace/OMERO-build/src/components/tests...
11:56:48 Entering /home/omero/workspace/OMERO-build/src/components/tests/ui...
11:56:48 
11:56:48 copy-licenses:
11:56:48 Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
11:56:48 Created dir: /home/omero/workspace/OMERO-build/src/dist/share
11:56:48 Copying 44 files to /home/omero/workspace/OMERO-build/src/dist/share
11:56:48 
11:56:48 copy-history:
11:56:48 Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
11:56:48 
11:56:48 copy-etc:
11:56:48 Copying 28 files to /home/omero/workspace/OMERO-build/src/dist/etc
11:56:48 Copying 1 file to /home/omero/workspace/OMERO-build/src/dist/etc/templates
11:56:48 
11:56:48 copy-sql:
11:56:48 Copying 60 files to /home/omero/workspace/OMERO-build/src/dist
11:56:54 
11:56:54 copy-server:
11:56:54 	conflict on /home/omero/workspace/OMERO-build/src/dist/lib/server/janino.jar in [server]: 3.1.9 won
11:56:54 
11:56:54 copy-client:
11:56:54 Created dir: /home/omero/workspace/OMERO-build/src/dist/lib/client
11:56:55 	conflict on /home/omero/workspace/OMERO-build/src/dist/lib/client/janino.jar in [client]: 3.1.9 won
11:56:56 
11:56:56 update-version:
11:56:56 Copying 1 file to /home/omero/workspace/OMERO-build/src/dist/etc
11:56:56 
11:56:56 create-workdirs:
11:56:56 Created dir: /home/omero/workspace/OMERO-build/src/dist/etc/grid
11:56:56 Created dir: /home/omero/workspace/OMERO-build/src/dist/var
11:56:56 Created dir: /home/omero/workspace/OMERO-build/src/dist/var/tmp
11:56:56 
11:56:56 copy-luts:
11:56:56 Created dir: /home/omero/workspace/OMERO-build/src/dist/lib/scripts/luts
11:56:56 Copying 47 files to /home/omero/workspace/OMERO-build/src/dist/lib/scripts/luts
11:56:56 
11:56:56 test-compile:
11:56:56 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
11:56:56 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
11:56:56 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
11:56:56 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
11:56:56 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
11:56:56 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
11:56:56 Entering /home/omero/workspace/OMERO-build/src/components/tests/ui...
11:56:56 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
11:56:56 
11:56:56 testng-init:
11:56:56 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
11:56:56 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
11:56:59 11:56:59,215 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.16
11:56:59 11:56:59,217 |-INFO in ch.qos.logback.classic.util.ContextInitializer@12550aaf - No custom configurators were discovered as a service.
11:56:59 11:56:59,218 |-INFO in ch.qos.logback.classic.util.ContextInitializer@12550aaf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
11:56:59 11:56:59,221 |-INFO in ch.qos.logback.classic.util.ContextInitializer@12550aaf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
11:56:59 11:56:59,221 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
11:56:59 11:56:59,222 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
11:56:59 11:56:59,222 |-INFO in ch.qos.logback.classic.util.ContextInitializer@12550aaf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
11:56:59 11:56:59,222 |-INFO in ch.qos.logback.classic.util.ContextInitializer@12550aaf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
11:56:59 11:56:59,224 |-INFO in ch.qos.logback.classic.util.ContextInitializer@12550aaf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
11:56:59 11:56:59,224 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
11:56:59 11:56:59,225 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes/logback.xml]
11:56:59 11:56:59,225 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@784bb800 - Resource [logback.xml] occurs multiple times on the classpath.
11:56:59 11:56:59,225 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@784bb800 - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes/logback.xml]
11:56:59 11:56:59,225 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@784bb800 - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources/logback.xml]
11:56:59 11:56:59,426 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stderr]
11:56:59 11:56:59,426 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
11:56:59 11:56:59,447 |-INFO in ch.qos.logback.core.model.processor.ImplicitModelHandler - Assuming default type [ch.qos.logback.classic.encoder.PatternLayoutEncoder] for [encoder] property
11:56:59 11:56:59,449 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@2c27d6e5 - As of version 1.2.0 "immediateFlush" property should be set within the enclosing Appender.
11:56:59 11:56:59,449 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@2c27d6e5 - Please move "immediateFlush" property into the enclosing appender.
11:56:59 11:56:59,512 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@2c27d6e5 - Setting the "immediateFlush" property of the enclosing appender to true
11:56:59 11:56:59,512 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [velocity] to ERROR
11:56:59 11:56:59,513 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [org] to ERROR
11:56:59 11:56:59,513 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [ome] to ERROR
11:56:59 11:56:59,513 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci] to ERROR
11:56:59 11:56:59,513 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to WARN
11:56:59 11:56:59,513 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stderr] to Logger[ROOT]
11:56:59 11:56:59,514 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@3eebbbf5 - End of configuration.
11:56:59 11:56:59,516 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@451cef5 - Registering current configuration as safe fallback point
11:56:59 11:56:59,516 |-INFO in ch.qos.logback.classic.util.ContextInitializer@12550aaf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 292 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
11:56:59 
11:56:59 lifecycle.test-compile:
11:56:59 Copying 3 files to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
11:56:59 Compiling 85 source files to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
11:56:59 warning: [options] bootstrap class path not set in conjunction with -source 8
11:57:00 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/AbstractServerTest.java:61: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
11:57:00 import omero.grid.RawAccessRequest;
11:57:00                  ^
11:57:01 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:32: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
11:57:01 import omero.grid.RawAccessRequest;
11:57:01                  ^
11:57:01 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:53: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
11:57:01 import omero.grid.RawAccessRequest;
11:57:01                  ^
11:57:01 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:31: warning: [deprecation] ImportJob in omero.model has been deprecated
11:57:01 import omero.model.ImportJob;
11:57:01                   ^
11:57:01 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:32: warning: [deprecation] ImportJobI in omero.model has been deprecated
11:57:01 import omero.model.ImportJobI;
11:57:01                   ^
11:57:01 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ModelMockFactory.java:1206: warning: [deprecation] newInstance() in Class has been deprecated
11:57:01         IObject link = (IObject) linkClass.newInstance();
11:57:01                                           ^
11:57:01   where T is a type-variable:
11:57:01     T extends Object declared in class Class
11:57:02 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/CreatePojosFixture2.java:269: warning: [deprecation] newInstance() in Class has been deprecated
11:57:02         T copy = (T) obj.getClass().newInstance();
11:57:02                                    ^
11:57:02   where T is a type-variable:
11:57:02     T extends Object declared in class Class
11:57:02 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
11:57:02         RawAccessRequest raw = new RawAccessRequest();
11:57:02         ^
11:57:02 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
11:57:02         RawAccessRequest raw = new RawAccessRequest();
11:57:02                                    ^
11:57:02 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:419: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
11:57:02         raw.repoUuid = legacy.root().getHash().getValue();
11:57:02            ^
11:57:02 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:420: warning: [deprecation] command in RawAccessRequest has been deprecated
11:57:02         raw.command = "rm";
11:57:02            ^
11:57:02 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:421: warning: [deprecation] args in RawAccessRequest has been deprecated
11:57:02         raw.args = Arrays.asList(path);
11:57:02            ^
11:57:02 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DiskUsageTest.java:156: warning: [deprecation] newInstance() in Class has been deprecated
11:57:02         final IObject link = linkClass.newInstance();
11:57:02                                       ^
11:57:02   where T is a type-variable:
11:57:02     T extends Object declared in class Class
11:57:02 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DuplicationTest.java:1332: warning: [deprecation] newInstance() in Class has been deprecated
11:57:02             originalLink.setChild(annotationClass.newInstance());
11:57:02                                                  ^
11:57:02   where T is a type-variable:
11:57:02     T extends Object declared in class Class
11:57:02 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ImporterTest.java:1088: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
11:57:02         RoiResult r = svc.findByImage(id, new RoiOptions());
11:57:02                          ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
11:57:03         final RawAccessRequest request = new RawAccessRequest();
11:57:03               ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
11:57:03         final RawAccessRequest request = new RawAccessRequest();
11:57:03                                              ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:901: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
11:57:03         request.repoUuid = repo.root().getHash().getValue();
11:57:03                ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:902: warning: [deprecation] command in RawAccessRequest has been deprecated
11:57:03         request.command = "exists";
11:57:03                ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:903: warning: [deprecation] args in RawAccessRequest has been deprecated
11:57:03         request.args = Collections.singletonList(dirPath);
11:57:03                ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
11:57:03         final RawAccessRequest request = new RawAccessRequest();
11:57:03               ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
11:57:03         final RawAccessRequest request = new RawAccessRequest();
11:57:03                                              ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:940: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
11:57:03         request.repoUuid = repo.root().getHash().getValue();
11:57:03                ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:941: warning: [deprecation] command in RawAccessRequest has been deprecated
11:57:03         request.command = "exists";
11:57:03                ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:942: warning: [deprecation] args in RawAccessRequest has been deprecated
11:57:03         request.args = Collections.singletonList(dirName);
11:57:03                ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJob in omero.model has been deprecated
11:57:03         final ImportJob importJob = new ImportJobI();
11:57:03               ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJobI in omero.model has been deprecated
11:57:03         final ImportJob importJob = new ImportJobI();
11:57:03                                         ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:266: warning: [deprecation] setImageName(RString) in ImportJob has been deprecated
11:57:03         importJob.setImageName(omero.rtypes.rstring(name));
11:57:03                  ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:268: warning: [deprecation] setImageDescription(RString) in ImportJob has been deprecated
11:57:03         importJob.setImageDescription(omero.rtypes.rstring(desc));
11:57:03                  ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
11:57:03         ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
11:57:03         ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
11:57:03         ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
11:57:03                           ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:274: warning: [deprecation] getImageName() in ImportJob has been deprecated
11:57:03         final String savedName = sent.getImageName().getValue().toString();
11:57:03                                      ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:275: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
11:57:03         final String savedDesc = sent.getImageDescription().getValue().toString();
11:57:03                                      ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
11:57:03         final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
11:57:03               ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
11:57:03         final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
11:57:03                                               ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:278: warning: [deprecation] getImageName() in ImportJob has been deprecated
11:57:03         final String retrievedName = retrievedImportJob.getImageName().getValue().toString();
11:57:03                                                        ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:279: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
11:57:03         final String retrievedDesc = retrievedImportJob.getImageDescription().getValue().toString();
11:57:03                                                        ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:141: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
11:57:03         RoiResult r = svc.findByImage(image.getId().getValue(),
11:57:03                          ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:190: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
11:57:03         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
11:57:03                                 ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:220: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
11:57:03         l = svc.getRoiMeasurements(image.getId().getValue(), options);
11:57:03                ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:241: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
11:57:03         l = svc.getRoiMeasurements(image.getId().getValue(), options);
11:57:03                ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:313: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
11:57:03         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
11:57:03                                 ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:320: warning: [deprecation] getMeasuredRoisMap(long,List<Long>,RoiOptions) in IRoiPrx has been deprecated
11:57:03         Map<Long, RoiResult> values = svc.getMeasuredRoisMap(image.getId()
11:57:03                                          ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:386: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
11:57:03         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
11:57:03                                 ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:390: warning: [deprecation] getTable(long) in IRoiPrx has been deprecated
11:57:03         table = svc.getTable(f.getId().getValue());
11:57:03                    ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:412: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
11:57:03         RoiResult r = svc.findByImage(image.getId().getValue(),
11:57:03                          ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:426: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
11:57:03         r = svc.findByRoi(r1.getId().getValue(), new RoiOptions());
11:57:03                ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:437: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
11:57:03         r = svc.findByRoi(r2.getId().getValue(), new RoiOptions());
11:57:03                ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:448: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
11:57:03         r = svc.findByPlane(image.getId().getValue(), 1, 0, new RoiOptions());
11:57:03                ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:459: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
11:57:03         r = svc.findByPlane(image.getId().getValue(), 1, 1, new RoiOptions());
11:57:03                ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [deprecation] Integer(int) in Integer has been deprecated
11:57:03             null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
11:57:03                   ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [deprecation] Integer(int) in Integer has been deprecated
11:57:03             null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
11:57:03                                   ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [deprecation] Integer(int) in Integer has been deprecated
11:57:03             new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
11:57:03                                    ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [deprecation] Integer(int) in Integer has been deprecated
11:57:03             new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
11:57:03                                                    ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [deprecation] Long(long) in Long has been deprecated
11:57:03             Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
11:57:03                                       ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [deprecation] Integer(int) in Integer has been deprecated
11:57:03             Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
11:57:03                                                        ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [deprecation] Integer(int) in Integer has been deprecated
11:57:03             Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
11:57:03                                                                        ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [deprecation] Integer(int) in Integer has been deprecated
11:57:03         inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
11:57:03                                        ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [deprecation] Integer(int) in Integer has been deprecated
11:57:03         inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
11:57:03                                                         ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [deprecation] Integer(int) in Integer has been deprecated
11:57:03         inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
11:57:03                                        ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [deprecation] Integer(int) in Integer has been deprecated
11:57:03         inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
11:57:03                                                        ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [deprecation] Integer(int) in Integer has been deprecated
11:57:03         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
11:57:03                                        ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [deprecation] Integer(int) in Integer has been deprecated
11:57:03         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
11:57:03                                                        ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [deprecation] Integer(int) in Integer has been deprecated
11:57:03         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
11:57:03                                        ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [deprecation] Integer(int) in Integer has been deprecated
11:57:03         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
11:57:03                                                        ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [deprecation] Integer(int) in Integer has been deprecated
11:57:03         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
11:57:03                                        ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [deprecation] Integer(int) in Integer has been deprecated
11:57:03         inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
11:57:03                                                        ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:755: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
11:57:03                 svc.getShapeStatsRestricted(
11:57:03                    ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:764: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
11:57:03         final ShapeStats [] stats = svc.getShapeStatsRestricted(ids, 0, 0, new int[] {0});
11:57:03                                        ^
11:57:03 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveTest.java:1030: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
11:57:03         projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
11:57:03                                      ^
11:57:04 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:478: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
11:57:04         request.typesToIgnore = Collections.singletonList("TagAnnotation");
11:57:04                ^
11:57:04 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:495: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
11:57:04         request.typesToIgnore = Collections.singletonList("IAnnotationLink");
11:57:04                ^
11:57:04 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:501: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
11:57:04         request.typesToIgnore = Collections.singletonList("Annotation");
11:57:04                ^
11:57:04 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:547: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
11:57:04                     request.typesToIgnore = Collections.singletonList("Annotation");
11:57:04                            ^
11:57:04 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/HierarchyDeleteTest.java:537: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
11:57:04         projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
11:57:04                                      ^
11:57:04 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:37: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
11:57:04         p2.setRelatedTo(p1);
11:57:04           ^
11:57:04 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:39: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
11:57:04         Assert.assertEquals(p1.getId(), p2.getRelatedTo().getId());
11:57:04                                           ^
11:57:04 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:66: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
11:57:04         pixels1.setRelatedTo(pixels2);
11:57:04                ^
11:57:04 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:68: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
11:57:04         Pixels pixels = pixels1.getRelatedTo();
11:57:04                                ^
11:57:04 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:88: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
11:57:04         Assert.assertNull(pixels1.getRelatedTo());
11:57:04                                  ^
11:57:04 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:106: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
11:57:04         pixels1.setRelatedTo(pixels2);
11:57:04                ^
11:57:04 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:108: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
11:57:04         Pixels pixels = pixels1.getRelatedTo();
11:57:04                                ^
11:57:04 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:128: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
11:57:04         Assert.assertNull(pixels1.getRelatedTo());
11:57:04                                  ^
11:57:04 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:113: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
11:57:04         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
11:57:04                                 ^
11:57:04 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:147: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
11:57:04         l = svc.getRoiMeasurements(image.getId().getValue(), options);
11:57:04                ^
11:57:04 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:186: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
11:57:04         List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
11:57:04                                 ^
11:57:04 /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:221: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
11:57:04         l = svc.getRoiMeasurements(image.getId().getValue(), options);
11:57:04                ^
11:57:04 Note: Some input files use unchecked or unsafe operations.
11:57:04 Note: Recompile with -Xlint:unchecked for details.
11:57:04 88 warnings
11:57:04 Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/_omero_build_1432645937.tmp
11:57:04 Building jar: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/OmeroJava-test.jar
11:57:04 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
11:57:04 :: delivering :: omero#OmeroJava-test;working@a7081cffa0b5 :: 5.6.3-576-35efecc35f-ice36-b3 :: integration :: Fri Dec 19 11:56:56 UTC 2025
11:57:04 	delivering ivy file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/OmeroJava-test.xml
11:57:04 :: publishing :: omero#OmeroJava-test
11:57:04 	published OmeroJava-test to /home/omero/workspace/OMERO-build/src/target/test-repository/OmeroJava-test-5.6.3-576-35efecc35f-ice36-b3.jar
11:57:04 	published ivy to /home/omero/workspace/OMERO-build/src/target/test-repository/OmeroJava-test-5.6.3-576-35efecc35f-ice36-b3.xml
11:57:04 
11:57:04 build-eclipse:
11:57:04 No sub-builds to iterate on
11:57:04 Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
11:57:04 
11:57:04 retrieve:
11:57:04 :: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
11:57:04 :: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
11:57:06 
11:57:06 prepare:
11:57:06 Preparing: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs
11:57:07 
11:57:07 release-clients:
11:57:07 Building zip: /home/omero/workspace/OMERO-build/src/target/OMERO.java-5.6.3-576-35efecc35f-ice36-b3.zip
11:57:12 
11:57:12 release-zip:
11:57:12 Building zip: /home/omero/workspace/OMERO-build/src/target/OMERO.server-5.6.3-576-35efecc35f-ice36-b3.zip
11:57:23 
11:57:23 BUILD SUCCESSFUL
11:57:23 Total time: 1 minute 28 seconds
11:57:23 ++ '[' -d .git ']'
11:57:23 ++ python3 ./build.py release-src
11:57:23 Buildfile: /home/omero/workspace/OMERO-build/src/build.xml
11:57:23 
11:57:23 release-src-git:
11:57:23 Releasing openmicroscopy-5.6.3-576-35efecc35f-ice36-b3
11:57:25   - creating /home/omero/workspace/OMERO-build/src/target/openmicroscopy-5.6.3-576-35efecc35f-ice36-b3.zip
11:57:25   - repacking /home/omero/workspace/OMERO-build/src/target/openmicroscopy-5.6.3-576-35efecc35f-ice36-b3-base.zip
11:57:26 
11:57:26 BUILD SUCCESSFUL
11:57:26 Total time: 3 seconds
11:57:26 ++ echo BUILD_NUMBER=3
11:57:26 ++ echo OMERO_BRANCH=merge_ci
11:57:26 ++ git_info
11:57:26 +++ git rev-parse HEAD
11:57:26 ++ HEAD=35efecc35fb2009188243bc7205356c6edf17230
11:57:26 ++ git log --max-count=1 35efecc35fb2009188243bc7205356c6edf17230
11:57:26 ++ env
11:57:26 ++ sort
11:57:26 Archiving artifacts
11:57:42 Finished: SUCCESS