01:19:01Started by upstream project "Trigger" build number 4101:19:01originally caused by:
01:19:01 Started by timer
01:19:01Running as SYSTEM
01:19:01Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-build
01:19:01The recommended git tool is: NONE
01:19:01No credentials specified
01:19:01 > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-build/src/.git # timeout=10
01:19:01Fetching changes from the remote Git repository
01:19:01 > git config remote.origin.url https://github.com/snoopycrimecop/openmicroscopy.git # timeout=10
01:19:01Fetching upstream changes from https://github.com/snoopycrimecop/openmicroscopy.git01:19:01 > git --version # timeout=10
01:19:02 > git --version # 'git version 2.52.0'
01:19:02 > git fetch --tags --force --progress -- https://github.com/snoopycrimecop/openmicroscopy.git +refs/heads/*:refs/remotes/origin/* # timeout=30
01:19:06 > git rev-parse origin/merge_ci^{commit} # timeout=10
01:19:06Checking out Revision 4200ce5a560278872282579f324b813e24f6765e (origin/merge_ci)
01:19:06 > git config core.sparsecheckout # timeout=10
01:19:06 > git checkout -f 4200ce5a560278872282579f324b813e24f6765e # timeout=10
01:19:09Commit message: "Add version.properties to etc/omero.properties"
01:19:09 > git rev-list --no-walk 6b3a800bcba4f892b1229eb8d477e595c95d7aa5 # timeout=10
01:19:09Cleaning workspace
01:19:09 > git rev-parse --verify HEAD # timeout=10
01:19:09Resetting working tree
01:19:09 > git reset --hard # timeout=10
01:19:09 > git clean -fdx # timeout=10
01:19:37Copied 6 artifacts from "OMERO-python-superbuild-build" build number 2601:19:37[OMERO-build] $ /bin/bash -xe /tmp/jenkins10384357406020298002.sh
01:19:37+ mv omero-scripts/dist/omero_scripts-5.10.1.dev0.tar.gz .
01:19:37+ cd src
01:19:37+ export OMERO_BRANCH=merge_ci
01:19:37+ OMERO_BRANCH=merge_ci
01:19:37+ OMERO_VEN=/home/omero/workspace/OMERO-build/omero-virtualenv
01:19:37+ rm -rf /home/omero/workspace/OMERO-build/omero-virtualenv
01:20:01+ source /home/omero/settings.env
01:20:01++ OMERO_DB_HOST=pg
01:20:01++ OMERO_DB_USER=postgres
01:20:01++ OMERO_DB_PASS=
01:20:01++ OMERO_ROOT_PASS=omero
01:20:01++ OMERO_DATA_DIR=/OMERO
01:20:01++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
01:20:01+ python3.11 -m venv /home/omero/workspace/OMERO-build/omero-virtualenv
01:20:20+ /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl01:20:22Collecting zeroc-ice==3.6.5
01:20:22 Downloading https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl (37.3 MB)
01:20:25 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 37.3/37.3 MB 10.5 MB/s eta 0:00:00
01:20:25Installing collected packages: zeroc-ice
01:20:29Successfully installed zeroc-ice-3.6.5
01:20:2901:20:29[notice] A new release of pip available: 22.3.1 -> 26.2
01:20:29[notice] To update, run: python3.11 -m pip install --upgrade pip
01:20:29+ /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install -U 'setuptools<66' omero-py
01:20:30Requirement already satisfied: setuptools<66 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages (65.5.1)
01:20:30Collecting setuptools<66
01:20:30 Using cached setuptools-65.7.0-py3-none-any.whl (1.2 MB)
01:20:30Collecting omero-py
01:20:30 Using cached omero_py-5.23.0-py3-none-any.whl (2.8 MB)
01:20:30Collecting appdirs
01:20:30 Using cached appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB)
01:20:31Collecting future
01:20:31 Using cached future-1.0.0-py3-none-any.whl (491 kB)
01:20:31Collecting numpy<3,>=2
01:20:31 Using cached numpy-2.4.6-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (16.9 MB)
01:20:32Collecting Pillow>=10.0.0
01:20:32 Using cached pillow-12.3.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (6.9 MB)
01:20:32Collecting PyYAML
01:20:32 Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB)
01:20:32Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages (from omero-py) (3.6.5)
01:20:32Collecting requests
01:20:32 Using cached requests-2.34.2-py3-none-any.whl (73 kB)
01:20:33Collecting portalocker
01:20:33 Using cached portalocker-4.0.0-py3-none-any.whl (33 kB)
01:20:33Collecting charset_normalizer<4,>=2
01:20:33 Using cached charset_normalizer-3.4.9-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (221 kB)
01:20:33Collecting idna<4,>=2.5
01:20:33 Using cached idna-3.18-py3-none-any.whl (65 kB)
01:20:33Collecting urllib3<3,>=1.26
01:20:33 Using cached urllib3-2.7.0-py3-none-any.whl (131 kB)
01:20:33Collecting certifi>=2023.5.7
01:20:33 Using cached certifi-2026.7.22-py3-none-any.whl (136 kB)
01:20:34Installing collected packages: appdirs, urllib3, setuptools, PyYAML, portalocker, Pillow, numpy, idna, future, charset_normalizer, certifi, requests, omero-py
01:20:35 Attempting uninstall: setuptools
01:20:35 Found existing installation: setuptools 65.5.1
01:20:35 Uninstalling setuptools-65.5.1:
01:20:36 Successfully uninstalled setuptools-65.5.1
01:21:28Successfully installed Pillow-12.3.0 PyYAML-6.0.3 appdirs-1.4.4 certifi-2026.7.22 charset_normalizer-3.4.9 future-1.0.0 idna-3.18 numpy-2.4.6 omero-py-5.23.0 portalocker-4.0.0 requests-2.34.2 setuptools-65.7.0 urllib3-2.7.0
01:21:2801:21:28[notice] A new release of pip available: 22.3.1 -> 26.2
01:21:28[notice] To update, run: python3.11 -m pip install --upgrade pip
01:21:28+ source /home/omero/workspace/OMERO-build/omero-virtualenv/bin/activate
01:21:28++ deactivate nondestructive
01:21:28++ '[' -n '' ']'
01:21:28++ '[' -n '' ']'
01:21:28++ hash -r
01:21:28++ '[' -n '' ']'
01:21:28++ unset VIRTUAL_ENV
01:21:28++ unset VIRTUAL_ENV_PROMPT
01:21:28++ '[' '!' nondestructive = nondestructive ']'
01:21:28++ VIRTUAL_ENV=/home/omero/workspace/OMERO-build/omero-virtualenv
01:21:28++ export VIRTUAL_ENV
01:21:28++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
01:21:28++ PATH=/home/omero/workspace/OMERO-build/omero-virtualenv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
01:21:28++ export PATH
01:21:28++ '[' -n '' ']'
01:21:28++ '[' -z '' ']'
01:21:28++ _OLD_VIRTUAL_PS1=
01:21:28++ PS1='(omero-virtualenv) '
01:21:28++ export PS1
01:21:28++ VIRTUAL_ENV_PROMPT='(omero-virtualenv) '
01:21:28++ export VIRTUAL_ENV_PROMPT
01:21:28++ hash -r
01:21:28+ source docs/hudson/OMERO.sh
01:21:28++ set -e
01:21:28++ set -u
01:21:28++ set -x
01:21:28++ source docs/hudson/functions.sh
01:21:28++ echo Building merge_ci
01:21:28Building merge_ci
01:21:28++ python3 ./build.py build-dev release-all
01:21:28Buildfile: /home/omero/workspace/OMERO-build/src/build.xml
01:21:2901:21:29check-ivy:
01:21:29Creating /home/omero/workspace/OMERO-build/src/etc/local.properties
01:21:29Created dir: /home/omero/workspace/OMERO-build/src/target
01:21:30:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
01:21:30:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:21:3101:21:31build-scons:
01:21:31Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
01:21:32No sub-builds to iterate on
01:21:33Entering /home/omero/workspace/OMERO-build/src/components/tools...
01:21:3301:21:33buildlist:
01:21:33:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
01:21:33:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:21:3301:21:33clean:
01:21:33Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
01:21:34Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
01:21:3401:21:34python-clean:
01:21:34WARNING: '' not a valid package name; please use only .-separated package names in setup.py
01:21:34/home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages/setuptools/dist.py:543: UserWarning: The version specified ('5.6.3-624-4200ce5a56-ice36-b30') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
01:21:34 warnings.warn(
01:21:34running clean
01:21:34Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb/omero_version.py
01:21:35Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
01:21:3501:21:35python-clean:
01:21:35WARNING: '' not a valid package name; please use only .-separated package names in setup.py
01:21:35/home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages/setuptools/dist.py:543: UserWarning: The version specified ('5.6.3-624-4200ce5a56-ice36-b30') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
01:21:35 warnings.warn(
01:21:35running clean
01:21:35Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS/omero_version.py
01:21:36Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
01:21:36Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
01:21:36Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
01:21:3701:21:37python-clean:
01:21:37WARNING: '' not a valid package name; please use only .-separated package names in setup.py
01:21:37/home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages/setuptools/dist.py:543: UserWarning: The version specified ('5.6.3-624-4200ce5a56-ice36-b30') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
01:21:37 warnings.warn(
01:21:37running clean
01:21:37Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy/omero_version.py
01:21:37Deleting directory /home/omero/workspace/OMERO-build/src/target
01:21:3801:21:38build-scons:
01:21:38Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
01:21:3901:21:39build:
01:21:39No sub-builds to iterate on
01:21:39Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
01:21:40Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
01:21:40Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
01:21:41Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
01:21:4101:21:41tools-init:
01:21:41no-op
01:21:4101:21:41retrieve:
01:21:41:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
01:21:41:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:23:0201:23:02prepare:
01:23:02Preparing: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs
01:23:02Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/.done
01:23:02Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/src
01:23:02Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
01:23:02Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
01:23:02Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
01:23:02Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/reports
01:23:02Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
01:23:02Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
01:23:02Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
01:23:02Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
01:23:02Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
01:23:02Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
01:23:02Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
01:23:02Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
01:23:0201:23:02pre-compile:
01:23:02Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/glacier2.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
01:23:04Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ice.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
01:23:11Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icegrid.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
01:23:15Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icestorm.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
01:23:16Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ome-xml.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
01:23:1801:23:18compile:
01:23:18no-op
01:23:1801:23:18package:
01:23:18Building jar: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/omero_client.jar
01:23:2201:23:22install:
01:23:22:: delivering :: omero#omero_client;working@652802b07c29 :: 5.6.3-624-4200ce5a56-ice36-b30 :: integration :: Sun Aug 02 01:21:40 UTC 2026
01:23:22 delivering ivy file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/ivy.xml
01:23:22:: publishing :: omero#omero_client
01:23:22 published omero_client to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-624-4200ce5a56-ice36-b30/omero_client-5.6.3-624-4200ce5a56-ice36-b30.jar
01:23:22 published ivy to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-624-4200ce5a56-ice36-b30/omero_client-5.6.3-624-4200ce5a56-ice36-b30.xml
01:23:23Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
01:23:23Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
01:23:2301:23:23retrieve:
01:23:23:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
01:23:23:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:23:24Entering /home/omero/workspace/OMERO-build/src/components/tools...
01:23:2401:23:24dist:
01:23:24Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/service-classes/META-INF
01:23:24Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/lib/server
01:23:24Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
01:23:24Expanding: /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts/omero_scripts-5.10.1.dev0.tar.gz into /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
01:23:24Copying 29 files to /home/omero/workspace/OMERO-build/src/components/tools/target/lib/scripts
01:23:25Copying 29 files to /home/omero/workspace/OMERO-build/src/dist
01:23:25Copied 9 empty directories to 1 empty directory under /home/omero/workspace/OMERO-build/src/dist
01:23:25Entering /home/omero/workspace/OMERO-build/src/components/tests...
01:23:26Entering /home/omero/workspace/OMERO-build/src/components/tests/ui...
01:23:2701:23:27copy-licenses:
01:23:27Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
01:23:27Created dir: /home/omero/workspace/OMERO-build/src/dist/share
01:23:27Copying 44 files to /home/omero/workspace/OMERO-build/src/dist/share
01:23:2701:23:27copy-history:
01:23:27Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
01:23:2701:23:27copy-etc:
01:23:27Copying 28 files to /home/omero/workspace/OMERO-build/src/dist/etc
01:23:27Copying 1 file to /home/omero/workspace/OMERO-build/src/dist/etc/templates
01:23:2801:23:28copy-sql:
01:23:28Copying 60 files to /home/omero/workspace/OMERO-build/src/dist
01:23:4001:23:40copy-server:
01:23:40 conflict on /home/omero/workspace/OMERO-build/src/dist/lib/server/janino.jar in [server]: 3.1.9 won
01:23:4601:23:46copy-client:
01:23:46Created dir: /home/omero/workspace/OMERO-build/src/dist/lib/client
01:23:49 conflict on /home/omero/workspace/OMERO-build/src/dist/lib/client/janino.jar in [client]: 3.1.9 won
01:23:5401:23:54update-version:
01:23:54Copying 1 file to /home/omero/workspace/OMERO-build/src/dist/etc
01:23:5401:23:54create-workdirs:
01:23:54Created dir: /home/omero/workspace/OMERO-build/src/dist/etc/grid
01:23:54Created dir: /home/omero/workspace/OMERO-build/src/dist/var
01:23:54Created dir: /home/omero/workspace/OMERO-build/src/dist/var/tmp
01:23:5401:23:54copy-luts:
01:23:54Created dir: /home/omero/workspace/OMERO-build/src/dist/lib/scripts/luts
01:23:54Copying 47 files to /home/omero/workspace/OMERO-build/src/dist/lib/scripts/luts
01:23:5501:23:55test-compile:
01:23:55:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:23:55Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
01:23:56Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
01:23:56Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
01:23:56Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
01:23:56Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
01:23:57Entering /home/omero/workspace/OMERO-build/src/components/tests/ui...
01:23:57Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
01:23:5801:23:58testng-init:
01:23:58:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
01:23:58:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:24:0601:24:06,096 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.16
01:24:0601:24:06,099 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1492c9d - No custom configurators were discovered as a service.
01:24:0601:24:06,099 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1492c9d - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
01:24:0601:24:06,103 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1492c9d - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
01:24:0601:24:06,106 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
01:24:0601:24:06,108 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
01:24:0601:24:06,109 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1492c9d - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 6 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
01:24:0601:24:06,109 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1492c9d - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
01:24:0601:24:06,111 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1492c9d - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
01:24:0601:24:06,114 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
01:24:0601:24:06,115 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes/logback.xml]
01:24:0601:24:06,117 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@24df8abf - Resource [logback.xml] occurs multiple times on the classpath.
01:24:0601:24:06,117 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@24df8abf - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes/logback.xml]
01:24:0601:24:06,117 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@24df8abf - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources/logback.xml]
01:24:0601:24:06,358 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stderr]
01:24:0601:24:06,358 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
01:24:0601:24:06,381 |-INFO in ch.qos.logback.core.model.processor.ImplicitModelHandler - Assuming default type [ch.qos.logback.classic.encoder.PatternLayoutEncoder] for [encoder] property
01:24:0601:24:06,383 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@390d47db - As of version 1.2.0 "immediateFlush" property should be set within the enclosing Appender.
01:24:0601:24:06,383 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@390d47db - Please move "immediateFlush" property into the enclosing appender.
01:24:0601:24:06,455 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@390d47db - Setting the "immediateFlush" property of the enclosing appender to true
01:24:0601:24:06,456 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [velocity] to ERROR
01:24:0601:24:06,456 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [org] to ERROR
01:24:0601:24:06,456 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [ome] to ERROR
01:24:0601:24:06,456 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci] to ERROR
01:24:0601:24:06,456 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to WARN
01:24:0601:24:06,456 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stderr] to Logger[ROOT]
01:24:0601:24:06,458 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@6aa09c35 - End of configuration.
01:24:0601:24:06,460 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@22457838 - Registering current configuration as safe fallback point
01:24:0601:24:06,460 |-INFO in ch.qos.logback.classic.util.ContextInitializer@1492c9d - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 349 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
01:24:0601:24:06lifecycle.test-compile:
01:24:06Copying 3 files to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
01:24:06Compiling 85 source files to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
01:24:06warning: [options] bootstrap class path not set in conjunction with -source 8
01:24:06warning: [options] source value 8 is obsolete and will be removed in a future release
01:24:06warning: [options] target value 8 is obsolete and will be removed in a future release
01:24:06warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
01:24:08/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/AbstractServerTest.java:61: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:24:08import omero.grid.RawAccessRequest;
01:24:08 ^
01:24:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:32: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:24:09import omero.grid.RawAccessRequest;
01:24:09 ^
01:24:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:53: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:24:09import omero.grid.RawAccessRequest;
01:24:09 ^
01:24:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:31: warning: [deprecation] ImportJob in omero.model has been deprecated
01:24:09import omero.model.ImportJob;
01:24:09 ^
01:24:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:32: warning: [deprecation] ImportJobI in omero.model has been deprecated
01:24:09import omero.model.ImportJobI;
01:24:09 ^
01:24:10/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ModelMockFactory.java:1206: warning: [deprecation] newInstance() in Class has been deprecated
01:24:10 IObject link = (IObject) linkClass.newInstance();
01:24:10 ^
01:24:10 where T is a type-variable:
01:24:10 T extends Object declared in class Class
01:24:10/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/CreatePojosFixture2.java:269: warning: [deprecation] newInstance() in Class has been deprecated
01:24:10 T copy = (T) obj.getClass().newInstance();
01:24:10 ^
01:24:10 where T is a type-variable:
01:24:10 T extends Object declared in class Class
01:24:10/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:24:10 RawAccessRequest raw = new RawAccessRequest();
01:24:10 ^
01:24:10/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:24:10 RawAccessRequest raw = new RawAccessRequest();
01:24:10 ^
01:24:10/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:419: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
01:24:10 raw.repoUuid = legacy.root().getHash().getValue();
01:24:10 ^
01:24:10/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:420: warning: [deprecation] command in RawAccessRequest has been deprecated
01:24:10 raw.command = "rm";
01:24:10 ^
01:24:10/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:421: warning: [deprecation] args in RawAccessRequest has been deprecated
01:24:10 raw.args = Arrays.asList(path);
01:24:10 ^
01:24:10/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DiskUsageTest.java:156: warning: [deprecation] newInstance() in Class has been deprecated
01:24:10 final IObject link = linkClass.newInstance();
01:24:10 ^
01:24:10 where T is a type-variable:
01:24:10 T extends Object declared in class Class
01:24:10/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DuplicationTest.java:1332: warning: [deprecation] newInstance() in Class has been deprecated
01:24:10 originalLink.setChild(annotationClass.newInstance());
01:24:10 ^
01:24:10 where T is a type-variable:
01:24:10 T extends Object declared in class Class
01:24:11/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ImporterTest.java:1088: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
01:24:11 RoiResult r = svc.findByImage(id, new RoiOptions());
01:24:11 ^
01:24:11/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:24:11 final RawAccessRequest request = new RawAccessRequest();
01:24:11 ^
01:24:11/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:24:11 final RawAccessRequest request = new RawAccessRequest();
01:24:11 ^
01:24:11/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:901: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
01:24:11 request.repoUuid = repo.root().getHash().getValue();
01:24:11 ^
01:24:11/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:902: warning: [deprecation] command in RawAccessRequest has been deprecated
01:24:11 request.command = "exists";
01:24:11 ^
01:24:11/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:903: warning: [deprecation] args in RawAccessRequest has been deprecated
01:24:11 request.args = Collections.singletonList(dirPath);
01:24:11 ^
01:24:11/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:24:11 final RawAccessRequest request = new RawAccessRequest();
01:24:11 ^
01:24:11/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
01:24:11 final RawAccessRequest request = new RawAccessRequest();
01:24:11 ^
01:24:11/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:940: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
01:24:11 request.repoUuid = repo.root().getHash().getValue();
01:24:11 ^
01:24:11/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:941: warning: [deprecation] command in RawAccessRequest has been deprecated
01:24:11 request.command = "exists";
01:24:11 ^
01:24:11/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:942: warning: [deprecation] args in RawAccessRequest has been deprecated
01:24:11 request.args = Collections.singletonList(dirName);
01:24:11 ^
01:24:11/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJob in omero.model has been deprecated
01:24:11 final ImportJob importJob = new ImportJobI();
01:24:11 ^
01:24:11/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJobI in omero.model has been deprecated
01:24:11 final ImportJob importJob = new ImportJobI();
01:24:11 ^
01:24:11/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:266: warning: [deprecation] setImageName(RString) in ImportJob has been deprecated
01:24:11 importJob.setImageName(omero.rtypes.rstring(name));
01:24:11 ^
01:24:11/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:268: warning: [deprecation] setImageDescription(RString) in ImportJob has been deprecated
01:24:11 importJob.setImageDescription(omero.rtypes.rstring(desc));
01:24:11 ^
01:24:11/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
01:24:11 ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
01:24:11 ^
01:24:11/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
01:24:11 ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
01:24:11 ^
01:24:11/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:274: warning: [deprecation] getImageName() in ImportJob has been deprecated
01:24:11 final String savedName = sent.getImageName().getValue().toString();
01:24:11 ^
01:24:11/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:275: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
01:24:11 final String savedDesc = sent.getImageDescription().getValue().toString();
01:24:11 ^
01:24:11/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
01:24:11 final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
01:24:11 ^
01:24:11/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
01:24:11 final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
01:24:11 ^
01:24:11/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:278: warning: [deprecation] getImageName() in ImportJob has been deprecated
01:24:11 final String retrievedName = retrievedImportJob.getImageName().getValue().toString();
01:24:11 ^
01:24:11/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:279: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
01:24:11 final String retrievedDesc = retrievedImportJob.getImageDescription().getValue().toString();
01:24:11 ^
01:24:12/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:141: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
01:24:12 RoiResult r = svc.findByImage(image.getId().getValue(),
01:24:12 ^
01:24:12/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:190: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:24:12 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
01:24:12 ^
01:24:12/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:220: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:24:12 l = svc.getRoiMeasurements(image.getId().getValue(), options);
01:24:12 ^
01:24:12/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:241: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:24:12 l = svc.getRoiMeasurements(image.getId().getValue(), options);
01:24:12 ^
01:24:12/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:313: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:24:12 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
01:24:12 ^
01:24:12/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:320: warning: [deprecation] getMeasuredRoisMap(long,List<Long>,RoiOptions) in IRoiPrx has been deprecated
01:24:12 Map<Long, RoiResult> values = svc.getMeasuredRoisMap(image.getId()
01:24:12 ^
01:24:12/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:386: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:24:12 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
01:24:12 ^
01:24:12/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:390: warning: [deprecation] getTable(long) in IRoiPrx has been deprecated
01:24:12 table = svc.getTable(f.getId().getValue());
01:24:12 ^
01:24:12/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:412: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
01:24:12 RoiResult r = svc.findByImage(image.getId().getValue(),
01:24:12 ^
01:24:12/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:426: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
01:24:12 r = svc.findByRoi(r1.getId().getValue(), new RoiOptions());
01:24:12 ^
01:24:12/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:437: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
01:24:12 r = svc.findByRoi(r2.getId().getValue(), new RoiOptions());
01:24:12 ^
01:24:12/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:448: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
01:24:12 r = svc.findByPlane(image.getId().getValue(), 1, 0, new RoiOptions());
01:24:12 ^
01:24:12/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:459: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
01:24:12 r = svc.findByPlane(image.getId().getValue(), 1, 1, new RoiOptions());
01:24:12 ^
01:24:12/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:24:12 null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
01:24:12 ^
01:24:12/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:24:12 null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
01:24:12 ^
01:24:12/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:24:12 new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
01:24:12 ^
01:24:12/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:24:12 new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
01:24:12 ^
01:24:12/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [removal] Long(long) in Long has been deprecated and marked for removal
01:24:12 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
01:24:12 ^
01:24:12/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:24:12 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
01:24:12 ^
01:24:12/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:24:12 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
01:24:12 ^
01:24:12/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:24:12 inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
01:24:12 ^
01:24:12/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:24:12 inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
01:24:12 ^
01:24:12/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:24:12 inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
01:24:12 ^
01:24:12/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:24:12 inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
01:24:12 ^
01:24:12/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:24:12 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
01:24:12 ^
01:24:12/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:24:12 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
01:24:12 ^
01:24:12/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:24:12 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
01:24:12 ^
01:24:12/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:24:12 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
01:24:12 ^
01:24:12/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:24:12 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
01:24:12 ^
01:24:12/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
01:24:12 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
01:24:12 ^
01:24:12/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:755: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
01:24:12 svc.getShapeStatsRestricted(
01:24:12 ^
01:24:12/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:764: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
01:24:12 final ShapeStats [] stats = svc.getShapeStatsRestricted(ids, 0, 0, new int[] {0});
01:24:12 ^
01:24:12/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveTest.java:1030: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
01:24:12 projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
01:24:12 ^
01:24:12/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:478: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
01:24:12 request.typesToIgnore = Collections.singletonList("TagAnnotation");
01:24:12 ^
01:24:12/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:495: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
01:24:12 request.typesToIgnore = Collections.singletonList("IAnnotationLink");
01:24:12 ^
01:24:12/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:501: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
01:24:12 request.typesToIgnore = Collections.singletonList("Annotation");
01:24:12 ^
01:24:12/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:547: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
01:24:12 request.typesToIgnore = Collections.singletonList("Annotation");
01:24:12 ^
01:24:13/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/HierarchyDeleteTest.java:537: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
01:24:13 projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
01:24:13 ^
01:24:13/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:37: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
01:24:13 p2.setRelatedTo(p1);
01:24:13 ^
01:24:13/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:39: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
01:24:13 Assert.assertEquals(p1.getId(), p2.getRelatedTo().getId());
01:24:13 ^
01:24:13/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:66: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
01:24:13 pixels1.setRelatedTo(pixels2);
01:24:13 ^
01:24:13/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:68: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
01:24:13 Pixels pixels = pixels1.getRelatedTo();
01:24:13 ^
01:24:13/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:88: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
01:24:13 Assert.assertNull(pixels1.getRelatedTo());
01:24:13 ^
01:24:13/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:106: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
01:24:13 pixels1.setRelatedTo(pixels2);
01:24:13 ^
01:24:13/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:108: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
01:24:13 Pixels pixels = pixels1.getRelatedTo();
01:24:13 ^
01:24:13/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:128: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
01:24:13 Assert.assertNull(pixels1.getRelatedTo());
01:24:13 ^
01:24:13/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:113: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:24:13 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
01:24:13 ^
01:24:13/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:147: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:24:13 l = svc.getRoiMeasurements(image.getId().getValue(), options);
01:24:13 ^
01:24:13/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:186: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:24:13 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
01:24:13 ^
01:24:13/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:221: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
01:24:13 l = svc.getRoiMeasurements(image.getId().getValue(), options);
01:24:13 ^
01:24:13Note: Some input files use unchecked or unsafe operations.
01:24:13Note: Recompile with -Xlint:unchecked for details.
01:24:1391 warnings
01:24:13Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/_omero_build_915197634.tmp
01:24:13Building jar: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/OmeroJava-test.jar
01:24:13:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:24:13:: delivering :: omero#OmeroJava-test;working@652802b07c29 :: 5.6.3-624-4200ce5a56-ice36-b30 :: integration :: Sun Aug 02 01:23:57 UTC 2026
01:24:14 delivering ivy file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/OmeroJava-test.xml
01:24:14:: publishing :: omero#OmeroJava-test
01:24:14 published OmeroJava-test to /home/omero/workspace/OMERO-build/src/target/test-repository/OmeroJava-test-5.6.3-624-4200ce5a56-ice36-b30.jar
01:24:14 published ivy to /home/omero/workspace/OMERO-build/src/target/test-repository/OmeroJava-test-5.6.3-624-4200ce5a56-ice36-b30.xml
01:24:1401:24:14build-eclipse:
01:24:14No sub-builds to iterate on
01:24:14Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
01:24:1501:24:15retrieve:
01:24:15:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
01:24:15:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
01:24:1901:24:19prepare:
01:24:19Preparing: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs
01:24:2201:24:22release-clients:
01:24:22Building zip: /home/omero/workspace/OMERO-build/src/target/OMERO.java-5.6.3-624-4200ce5a56-ice36-b30.zip
01:24:2801:24:28release-zip:
01:24:28Building zip: /home/omero/workspace/OMERO-build/src/target/OMERO.server-5.6.3-624-4200ce5a56-ice36-b30.zip
01:24:4101:24:41BUILD SUCCESSFUL
01:24:41Total time: 3 minutes 12 seconds
01:24:41++ '[' -d .git ']'
01:24:41++ python3 ./build.py release-src
01:24:41Buildfile: /home/omero/workspace/OMERO-build/src/build.xml
01:24:4201:24:42release-src-git:
01:24:42Releasing openmicroscopy-5.6.3-624-4200ce5a56-ice36-b30
01:24:44 - creating /home/omero/workspace/OMERO-build/src/target/openmicroscopy-5.6.3-624-4200ce5a56-ice36-b30.zip
01:24:44 - repacking /home/omero/workspace/OMERO-build/src/target/openmicroscopy-5.6.3-624-4200ce5a56-ice36-b30-base.zip
01:24:4501:24:45BUILD SUCCESSFUL
01:24:45Total time: 4 seconds
01:24:45++ echo BUILD_NUMBER=30
01:24:45++ echo OMERO_BRANCH=merge_ci
01:24:45++ git_info
01:24:45+++ git rev-parse HEAD
01:24:45++ HEAD=4200ce5a560278872282579f324b813e24f6765e
01:24:45++ git log --max-count=1 4200ce5a560278872282579f324b813e24f6765e
01:24:45++ env
01:24:45++ sort
01:24:45Archiving artifacts
01:25:02Finished: SUCCESS
