11:16:15Started by user devspace11:16:15Running as SYSTEM
11:16:15Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-build
11:16:15The recommended git tool is: NONE
11:16:15No credentials specified
11:16:15 > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-build/src/.git # timeout=10
11:16:15Fetching changes from the remote Git repository
11:16:15 > git config remote.origin.url https://github.com/snoopycrimecop/openmicroscopy.git # timeout=10
11:16:15Fetching upstream changes from https://github.com/snoopycrimecop/openmicroscopy.git11:16:15 > git --version # timeout=10
11:16:15 > git --version # 'git version 2.52.0'
11:16:15 > git fetch --tags --force --progress -- https://github.com/snoopycrimecop/openmicroscopy.git +refs/heads/*:refs/remotes/origin/* # timeout=30
11:16:20 > git rev-parse origin/merge_ci^{commit} # timeout=10
11:16:20Checking out Revision 0d859ccd1b31c9caea67b4f28d240331c0859657 (origin/merge_ci)
11:16:20 > git config core.sparsecheckout # timeout=10
11:16:20 > git checkout -f 0d859ccd1b31c9caea67b4f28d240331c0859657 # timeout=10
11:16:23Commit message: "Add version.properties to etc/omero.properties"
11:16:23 > git rev-list --no-walk b4465394cd49c4f41d0e771d45a28b163bc891cb # timeout=10
11:16:23Cleaning workspace
11:16:23 > git rev-parse --verify HEAD # timeout=10
11:16:23Resetting working tree
11:16:23 > git reset --hard # timeout=10
11:16:24 > git clean -fdx # timeout=10
11:16:55Copied 6 artifacts from "OMERO-python-superbuild-build" build number 2811:16:55[OMERO-build] $ /bin/bash -xe /tmp/jenkins6790403865550331738.sh
11:16:55+ mv omero-scripts/dist/omero_scripts-5.10.1.dev0.tar.gz .
11:16:55+ cd src
11:16:55+ export OMERO_BRANCH=merge_ci
11:16:55+ OMERO_BRANCH=merge_ci
11:16:55+ OMERO_VEN=/home/omero/workspace/OMERO-build/omero-virtualenv
11:16:55+ rm -rf /home/omero/workspace/OMERO-build/omero-virtualenv
11:17:21+ source /home/omero/settings.env
11:17:22++ OMERO_DB_HOST=pg
11:17:22++ OMERO_DB_USER=postgres
11:17:22++ OMERO_DB_PASS=
11:17:22++ OMERO_ROOT_PASS=omero
11:17:22++ OMERO_DATA_DIR=/OMERO
11:17:22++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
11:17:22+ python3.11 -m venv /home/omero/workspace/OMERO-build/omero-virtualenv
11:17:42+ /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl11:17:43Collecting zeroc-ice==3.6.5
11:17:44 Downloading https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl (37.3 MB)
11:17:47 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 37.3/37.3 MB 11.4 MB/s eta 0:00:00
11:17:47Installing collected packages: zeroc-ice
11:17:51Successfully installed zeroc-ice-3.6.5
11:17:5111:17:51[notice] A new release of pip available: 22.3.1 -> 26.2
11:17:51[notice] To update, run: python3.11 -m pip install --upgrade pip
11:17:51+ /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install -U 'setuptools<66' omero-py
11:17:52Requirement already satisfied: setuptools<66 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages (65.5.1)
11:17:52Collecting setuptools<66
11:17:52 Using cached setuptools-65.7.0-py3-none-any.whl (1.2 MB)
11:17:53Collecting omero-py
11:17:53 Using cached omero_py-5.23.0-py3-none-any.whl (2.8 MB)
11:17:53Collecting appdirs
11:17:53 Using cached appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB)
11:17:53Collecting future
11:17:53 Using cached future-1.0.0-py3-none-any.whl (491 kB)
11:17:54Collecting numpy<3,>=2
11:17:54 Using cached numpy-2.4.6-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (16.9 MB)
11:17:54Collecting Pillow>=10.0.0
11:17:54 Using cached pillow-12.3.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (6.9 MB)
11:17:55Collecting PyYAML
11:17:55 Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB)
11:17:55Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages (from omero-py) (3.6.5)
11:17:55Collecting requests
11:17:55 Using cached requests-2.34.2-py3-none-any.whl (73 kB)
11:17:55Collecting portalocker
11:17:55 Using cached portalocker-4.1.0-py3-none-any.whl (65 kB)
11:17:55Collecting charset_normalizer<4,>=2
11:17:56 Using cached charset_normalizer-3.4.9-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (221 kB)
11:17:56Collecting idna<4,>=2.5
11:17:56 Using cached idna-3.18-py3-none-any.whl (65 kB)
11:17:56Collecting urllib3<3,>=1.26
11:17:56 Using cached urllib3-2.7.0-py3-none-any.whl (131 kB)
11:17:56Collecting certifi>=2023.5.7
11:17:56 Using cached certifi-2026.7.22-py3-none-any.whl (136 kB)
11:17:56Installing collected packages: appdirs, urllib3, setuptools, PyYAML, portalocker, Pillow, numpy, idna, future, charset_normalizer, certifi, requests, omero-py
11:17:57 Attempting uninstall: setuptools
11:17:57 Found existing installation: setuptools 65.5.1
11:17:58 Uninstalling setuptools-65.5.1:
11:17:58 Successfully uninstalled setuptools-65.5.1
11:18:54Successfully installed Pillow-12.3.0 PyYAML-6.0.3 appdirs-1.4.4 certifi-2026.7.22 charset_normalizer-3.4.9 future-1.0.0 idna-3.18 numpy-2.4.6 omero-py-5.23.0 portalocker-4.1.0 requests-2.34.2 setuptools-65.7.0 urllib3-2.7.0
11:18:5411:18:54[notice] A new release of pip available: 22.3.1 -> 26.2
11:18:54[notice] To update, run: python3.11 -m pip install --upgrade pip
11:18:54+ source /home/omero/workspace/OMERO-build/omero-virtualenv/bin/activate
11:18:54++ deactivate nondestructive
11:18:54++ '[' -n '' ']'
11:18:54++ '[' -n '' ']'
11:18:54++ hash -r
11:18:54++ '[' -n '' ']'
11:18:54++ unset VIRTUAL_ENV
11:18:54++ unset VIRTUAL_ENV_PROMPT
11:18:54++ '[' '!' nondestructive = nondestructive ']'
11:18:54++ VIRTUAL_ENV=/home/omero/workspace/OMERO-build/omero-virtualenv
11:18:54++ export VIRTUAL_ENV
11:18:54++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
11:18:54++ PATH=/home/omero/workspace/OMERO-build/omero-virtualenv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
11:18:54++ export PATH
11:18:54++ '[' -n '' ']'
11:18:54++ '[' -z '' ']'
11:18:54++ _OLD_VIRTUAL_PS1=
11:18:54++ PS1='(omero-virtualenv) '
11:18:54++ export PS1
11:18:54++ VIRTUAL_ENV_PROMPT='(omero-virtualenv) '
11:18:54++ export VIRTUAL_ENV_PROMPT
11:18:54++ hash -r
11:18:54+ source docs/hudson/OMERO.sh
11:18:54++ set -e
11:18:54++ set -u
11:18:54++ set -x
11:18:54++ source docs/hudson/functions.sh
11:18:54++ echo Building merge_ci
11:18:54Building merge_ci
11:18:54++ python3 ./build.py build-dev release-all
11:18:54Buildfile: /home/omero/workspace/OMERO-build/src/build.xml
11:18:5511:18:55check-ivy:
11:18:55Creating /home/omero/workspace/OMERO-build/src/etc/local.properties
11:18:55Created dir: /home/omero/workspace/OMERO-build/src/target
11:18:56:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
11:18:56:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
11:18:5711:18:57build-scons:
11:18:57Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
11:18:59No sub-builds to iterate on
11:18:59Entering /home/omero/workspace/OMERO-build/src/components/tools...
11:19:0011:19:00buildlist:
11:19:00:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
11:19:00:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
11:19:0011:19:00clean:
11:19:00Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
11:19:00Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
11:19:0111:19:01python-clean:
11:19:01WARNING: '' not a valid package name; please use only .-separated package names in setup.py
11:19:01/home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages/setuptools/dist.py:543: UserWarning: The version specified ('5.6.3-625-0d859ccd1b-ice36-b33') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
11:19:01 warnings.warn(
11:19:01running clean
11:19:01Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb/omero_version.py
11:19:02Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
11:19:0211:19:02python-clean:
11:19:02WARNING: '' not a valid package name; please use only .-separated package names in setup.py
11:19:02/home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages/setuptools/dist.py:543: UserWarning: The version specified ('5.6.3-625-0d859ccd1b-ice36-b33') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
11:19:02 warnings.warn(
11:19:02running clean
11:19:02Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS/omero_version.py
11:19:03Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
11:19:03Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
11:19:03Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
11:19:0411:19:04python-clean:
11:19:04WARNING: '' not a valid package name; please use only .-separated package names in setup.py
11:19:04/home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages/setuptools/dist.py:543: UserWarning: The version specified ('5.6.3-625-0d859ccd1b-ice36-b33') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
11:19:04 warnings.warn(
11:19:04running clean
11:19:04Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy/omero_version.py
11:19:04Deleting directory /home/omero/workspace/OMERO-build/src/target
11:19:0511:19:05build-scons:
11:19:05Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
11:19:0611:19:06build:
11:19:06No sub-builds to iterate on
11:19:06Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
11:19:07Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
11:19:07Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
11:19:08Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
11:19:0811:19:08tools-init:
11:19:08no-op
11:19:0811:19:08retrieve:
11:19:08:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
11:19:08:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
11:19:5511:19:55prepare:
11:19:55Preparing: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs
11:19:55Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/.done
11:19:55Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/src
11:19:55Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
11:19:55Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
11:19:55Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
11:19:55Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/reports
11:19:55Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
11:19:55Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
11:19:55Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
11:19:55Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
11:19:55Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
11:19:55Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
11:19:55Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
11:19:55Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
11:19:5511:19:55pre-compile:
11:19:55Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/glacier2.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
11:19:57Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ice.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
11:20:04Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icegrid.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
11:20:09Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icestorm.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
11:20:10Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ome-xml.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
11:20:1211:20:12compile:
11:20:12no-op
11:20:1211:20:12package:
11:20:12Building jar: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/omero_client.jar
11:20:1711:20:17install:
11:20:17:: delivering :: omero#omero_client;working@652802b07c29 :: 5.6.3-625-0d859ccd1b-ice36-b33 :: integration :: Mon Aug 03 11:19:07 UTC 2026
11:20:17 delivering ivy file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/ivy.xml
11:20:17:: publishing :: omero#omero_client
11:20:17 published omero_client to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-625-0d859ccd1b-ice36-b33/omero_client-5.6.3-625-0d859ccd1b-ice36-b33.jar
11:20:17 published ivy to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-625-0d859ccd1b-ice36-b33/omero_client-5.6.3-625-0d859ccd1b-ice36-b33.xml
11:20:17Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
11:20:17Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
11:20:1811:20:18retrieve:
11:20:18:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
11:20:18:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
11:20:19Entering /home/omero/workspace/OMERO-build/src/components/tools...
11:20:1911:20:19dist:
11:20:19Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/service-classes/META-INF
11:20:19Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/lib/server
11:20:19Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
11:20:19Expanding: /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts/omero_scripts-5.10.1.dev0.tar.gz into /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
11:20:19Copying 29 files to /home/omero/workspace/OMERO-build/src/components/tools/target/lib/scripts
11:20:20Copying 29 files to /home/omero/workspace/OMERO-build/src/dist
11:20:20Copied 9 empty directories to 1 empty directory under /home/omero/workspace/OMERO-build/src/dist
11:20:20Entering /home/omero/workspace/OMERO-build/src/components/tests...
11:20:21Entering /home/omero/workspace/OMERO-build/src/components/tests/ui...
11:20:2211:20:22copy-licenses:
11:20:22Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
11:20:22Created dir: /home/omero/workspace/OMERO-build/src/dist/share
11:20:22Copying 44 files to /home/omero/workspace/OMERO-build/src/dist/share
11:20:2211:20:22copy-history:
11:20:22Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
11:20:2211:20:22copy-etc:
11:20:22Copying 28 files to /home/omero/workspace/OMERO-build/src/dist/etc
11:20:22Copying 1 file to /home/omero/workspace/OMERO-build/src/dist/etc/templates
11:20:2311:20:23copy-sql:
11:20:23Copying 60 files to /home/omero/workspace/OMERO-build/src/dist
11:20:3511:20:35copy-server:
11:20:35 conflict on /home/omero/workspace/OMERO-build/src/dist/lib/server/janino.jar in [server]: 3.1.9 won
11:20:5111:20:51copy-client:
11:20:51Created dir: /home/omero/workspace/OMERO-build/src/dist/lib/client
11:20:55 conflict on /home/omero/workspace/OMERO-build/src/dist/lib/client/janino.jar in [client]: 3.1.9 won
11:21:0011:21:00update-version:
11:21:00Copying 1 file to /home/omero/workspace/OMERO-build/src/dist/etc
11:21:0011:21:00create-workdirs:
11:21:00Created dir: /home/omero/workspace/OMERO-build/src/dist/etc/grid
11:21:00Created dir: /home/omero/workspace/OMERO-build/src/dist/var
11:21:00Created dir: /home/omero/workspace/OMERO-build/src/dist/var/tmp
11:21:0011:21:00copy-luts:
11:21:00Created dir: /home/omero/workspace/OMERO-build/src/dist/lib/scripts/luts
11:21:00Copying 47 files to /home/omero/workspace/OMERO-build/src/dist/lib/scripts/luts
11:21:0111:21:01test-compile:
11:21:01:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
11:21:01Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
11:21:02Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
11:21:02Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
11:21:02Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
11:21:02Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
11:21:03Entering /home/omero/workspace/OMERO-build/src/components/tests/ui...
11:21:03Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
11:21:0311:21:03testng-init:
11:21:03:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
11:21:03:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
11:21:1211:21:12,199 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.16
11:21:1211:21:12,202 |-INFO in ch.qos.logback.classic.util.ContextInitializer@6aa09c35 - No custom configurators were discovered as a service.
11:21:1211:21:12,202 |-INFO in ch.qos.logback.classic.util.ContextInitializer@6aa09c35 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
11:21:1211:21:12,206 |-INFO in ch.qos.logback.classic.util.ContextInitializer@6aa09c35 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
11:21:1211:21:12,209 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
11:21:1211:21:12,211 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
11:21:1211:21:12,212 |-INFO in ch.qos.logback.classic.util.ContextInitializer@6aa09c35 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 6 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
11:21:1211:21:12,212 |-INFO in ch.qos.logback.classic.util.ContextInitializer@6aa09c35 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
11:21:1211:21:12,214 |-INFO in ch.qos.logback.classic.util.ContextInitializer@6aa09c35 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
11:21:1211:21:12,217 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
11:21:1211:21:12,218 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes/logback.xml]
11:21:1211:21:12,219 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@22457838 - Resource [logback.xml] occurs multiple times on the classpath.
11:21:1211:21:12,219 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@22457838 - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes/logback.xml]
11:21:1211:21:12,219 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@22457838 - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources/logback.xml]
11:21:1211:21:12,453 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stderr]
11:21:1211:21:12,453 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
11:21:1211:21:12,476 |-INFO in ch.qos.logback.core.model.processor.ImplicitModelHandler - Assuming default type [ch.qos.logback.classic.encoder.PatternLayoutEncoder] for [encoder] property
11:21:1211:21:12,479 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@7a9794bd - As of version 1.2.0 "immediateFlush" property should be set within the enclosing Appender.
11:21:1211:21:12,479 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@7a9794bd - Please move "immediateFlush" property into the enclosing appender.
11:21:1211:21:12,552 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@7a9794bd - Setting the "immediateFlush" property of the enclosing appender to true
11:21:1211:21:12,553 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [velocity] to ERROR
11:21:1211:21:12,553 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [org] to ERROR
11:21:1211:21:12,553 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [ome] to ERROR
11:21:1211:21:12,553 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci] to ERROR
11:21:1211:21:12,553 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to WARN
11:21:1211:21:12,553 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stderr] to Logger[ROOT]
11:21:1211:21:12,554 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@297727ab - End of configuration.
11:21:1211:21:12,557 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@47585784 - Registering current configuration as safe fallback point
11:21:1211:21:12,557 |-INFO in ch.qos.logback.classic.util.ContextInitializer@6aa09c35 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 343 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
11:21:1211:21:12lifecycle.test-compile:
11:21:12Copying 3 files to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
11:21:12Compiling 85 source files to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
11:21:13warning: [options] bootstrap class path not set in conjunction with -source 8
11:21:13warning: [options] source value 8 is obsolete and will be removed in a future release
11:21:13warning: [options] target value 8 is obsolete and will be removed in a future release
11:21:13warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
11:21:14/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/AbstractServerTest.java:61: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
11:21:14import omero.grid.RawAccessRequest;
11:21:14 ^
11:21:15/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:32: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
11:21:15import omero.grid.RawAccessRequest;
11:21:15 ^
11:21:15/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:53: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
11:21:15import omero.grid.RawAccessRequest;
11:21:15 ^
11:21:15/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:31: warning: [deprecation] ImportJob in omero.model has been deprecated
11:21:15import omero.model.ImportJob;
11:21:15 ^
11:21:15/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:32: warning: [deprecation] ImportJobI in omero.model has been deprecated
11:21:15import omero.model.ImportJobI;
11:21:15 ^
11:21:16/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ModelMockFactory.java:1206: warning: [deprecation] newInstance() in Class has been deprecated
11:21:16 IObject link = (IObject) linkClass.newInstance();
11:21:16 ^
11:21:16 where T is a type-variable:
11:21:16 T extends Object declared in class Class
11:21:16/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/CreatePojosFixture2.java:269: warning: [deprecation] newInstance() in Class has been deprecated
11:21:16 T copy = (T) obj.getClass().newInstance();
11:21:16 ^
11:21:16 where T is a type-variable:
11:21:16 T extends Object declared in class Class
11:21:16/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
11:21:16 RawAccessRequest raw = new RawAccessRequest();
11:21:16 ^
11:21:16/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
11:21:16 RawAccessRequest raw = new RawAccessRequest();
11:21:16 ^
11:21:16/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:419: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
11:21:16 raw.repoUuid = legacy.root().getHash().getValue();
11:21:16 ^
11:21:16/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:420: warning: [deprecation] command in RawAccessRequest has been deprecated
11:21:16 raw.command = "rm";
11:21:16 ^
11:21:16/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:421: warning: [deprecation] args in RawAccessRequest has been deprecated
11:21:16 raw.args = Arrays.asList(path);
11:21:16 ^
11:21:16/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DiskUsageTest.java:156: warning: [deprecation] newInstance() in Class has been deprecated
11:21:16 final IObject link = linkClass.newInstance();
11:21:16 ^
11:21:16 where T is a type-variable:
11:21:16 T extends Object declared in class Class
11:21:17/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DuplicationTest.java:1332: warning: [deprecation] newInstance() in Class has been deprecated
11:21:17 originalLink.setChild(annotationClass.newInstance());
11:21:17 ^
11:21:17 where T is a type-variable:
11:21:17 T extends Object declared in class Class
11:21:17/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ImporterTest.java:1088: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
11:21:17 RoiResult r = svc.findByImage(id, new RoiOptions());
11:21:17 ^
11:21:17/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
11:21:17 final RawAccessRequest request = new RawAccessRequest();
11:21:17 ^
11:21:17/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
11:21:17 final RawAccessRequest request = new RawAccessRequest();
11:21:17 ^
11:21:17/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:901: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
11:21:17 request.repoUuid = repo.root().getHash().getValue();
11:21:17 ^
11:21:17/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:902: warning: [deprecation] command in RawAccessRequest has been deprecated
11:21:17 request.command = "exists";
11:21:17 ^
11:21:17/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:903: warning: [deprecation] args in RawAccessRequest has been deprecated
11:21:17 request.args = Collections.singletonList(dirPath);
11:21:17 ^
11:21:17/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
11:21:17 final RawAccessRequest request = new RawAccessRequest();
11:21:17 ^
11:21:17/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
11:21:17 final RawAccessRequest request = new RawAccessRequest();
11:21:17 ^
11:21:17/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:940: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
11:21:17 request.repoUuid = repo.root().getHash().getValue();
11:21:17 ^
11:21:17/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:941: warning: [deprecation] command in RawAccessRequest has been deprecated
11:21:17 request.command = "exists";
11:21:17 ^
11:21:17/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:942: warning: [deprecation] args in RawAccessRequest has been deprecated
11:21:17 request.args = Collections.singletonList(dirName);
11:21:17 ^
11:21:17/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJob in omero.model has been deprecated
11:21:17 final ImportJob importJob = new ImportJobI();
11:21:17 ^
11:21:17/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJobI in omero.model has been deprecated
11:21:17 final ImportJob importJob = new ImportJobI();
11:21:17 ^
11:21:17/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:266: warning: [deprecation] setImageName(RString) in ImportJob has been deprecated
11:21:17 importJob.setImageName(omero.rtypes.rstring(name));
11:21:17 ^
11:21:17/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:268: warning: [deprecation] setImageDescription(RString) in ImportJob has been deprecated
11:21:17 importJob.setImageDescription(omero.rtypes.rstring(desc));
11:21:17 ^
11:21:17/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
11:21:17 ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
11:21:17 ^
11:21:17/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
11:21:17 ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
11:21:17 ^
11:21:17/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:274: warning: [deprecation] getImageName() in ImportJob has been deprecated
11:21:17 final String savedName = sent.getImageName().getValue().toString();
11:21:17 ^
11:21:17/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:275: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
11:21:17 final String savedDesc = sent.getImageDescription().getValue().toString();
11:21:17 ^
11:21:17/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
11:21:17 final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
11:21:17 ^
11:21:17/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
11:21:17 final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
11:21:17 ^
11:21:17/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:278: warning: [deprecation] getImageName() in ImportJob has been deprecated
11:21:17 final String retrievedName = retrievedImportJob.getImageName().getValue().toString();
11:21:17 ^
11:21:17/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:279: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
11:21:17 final String retrievedDesc = retrievedImportJob.getImageDescription().getValue().toString();
11:21:17 ^
11:21:18/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:141: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
11:21:18 RoiResult r = svc.findByImage(image.getId().getValue(),
11:21:18 ^
11:21:18/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:190: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
11:21:18 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
11:21:18 ^
11:21:18/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:220: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
11:21:18 l = svc.getRoiMeasurements(image.getId().getValue(), options);
11:21:18 ^
11:21:18/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:241: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
11:21:18 l = svc.getRoiMeasurements(image.getId().getValue(), options);
11:21:18 ^
11:21:18/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:313: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
11:21:18 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
11:21:18 ^
11:21:18/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:320: warning: [deprecation] getMeasuredRoisMap(long,List<Long>,RoiOptions) in IRoiPrx has been deprecated
11:21:18 Map<Long, RoiResult> values = svc.getMeasuredRoisMap(image.getId()
11:21:18 ^
11:21:18/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:386: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
11:21:18 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
11:21:18 ^
11:21:18/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:390: warning: [deprecation] getTable(long) in IRoiPrx has been deprecated
11:21:18 table = svc.getTable(f.getId().getValue());
11:21:18 ^
11:21:18/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:412: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
11:21:18 RoiResult r = svc.findByImage(image.getId().getValue(),
11:21:18 ^
11:21:18/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:426: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
11:21:18 r = svc.findByRoi(r1.getId().getValue(), new RoiOptions());
11:21:18 ^
11:21:18/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:437: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
11:21:18 r = svc.findByRoi(r2.getId().getValue(), new RoiOptions());
11:21:18 ^
11:21:18/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:448: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
11:21:18 r = svc.findByPlane(image.getId().getValue(), 1, 0, new RoiOptions());
11:21:18 ^
11:21:18/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:459: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
11:21:18 r = svc.findByPlane(image.getId().getValue(), 1, 1, new RoiOptions());
11:21:18 ^
11:21:18/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
11:21:18 null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
11:21:18 ^
11:21:18/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
11:21:18 null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
11:21:18 ^
11:21:18/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
11:21:18 new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
11:21:18 ^
11:21:18/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
11:21:18 new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
11:21:18 ^
11:21:18/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [removal] Long(long) in Long has been deprecated and marked for removal
11:21:18 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
11:21:18 ^
11:21:18/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
11:21:18 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
11:21:18 ^
11:21:18/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
11:21:18 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
11:21:18 ^
11:21:18/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
11:21:18 inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
11:21:18 ^
11:21:18/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
11:21:18 inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
11:21:18 ^
11:21:18/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
11:21:18 inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
11:21:18 ^
11:21:18/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
11:21:18 inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
11:21:18 ^
11:21:18/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
11:21:18 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
11:21:18 ^
11:21:18/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
11:21:18 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
11:21:18 ^
11:21:18/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
11:21:18 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
11:21:18 ^
11:21:18/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
11:21:18 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
11:21:18 ^
11:21:18/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
11:21:18 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
11:21:18 ^
11:21:18/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
11:21:18 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
11:21:18 ^
11:21:18/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:755: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
11:21:18 svc.getShapeStatsRestricted(
11:21:18 ^
11:21:18/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:764: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
11:21:18 final ShapeStats [] stats = svc.getShapeStatsRestricted(ids, 0, 0, new int[] {0});
11:21:18 ^
11:21:18/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveTest.java:1030: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
11:21:18 projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
11:21:18 ^
11:21:19/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:478: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
11:21:19 request.typesToIgnore = Collections.singletonList("TagAnnotation");
11:21:19 ^
11:21:19/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:495: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
11:21:19 request.typesToIgnore = Collections.singletonList("IAnnotationLink");
11:21:19 ^
11:21:19/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:501: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
11:21:19 request.typesToIgnore = Collections.singletonList("Annotation");
11:21:19 ^
11:21:19/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:547: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
11:21:19 request.typesToIgnore = Collections.singletonList("Annotation");
11:21:19 ^
11:21:19/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/HierarchyDeleteTest.java:537: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
11:21:19 projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
11:21:19 ^
11:21:19/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:37: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
11:21:19 p2.setRelatedTo(p1);
11:21:19 ^
11:21:19/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:39: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
11:21:19 Assert.assertEquals(p1.getId(), p2.getRelatedTo().getId());
11:21:19 ^
11:21:19/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:66: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
11:21:19 pixels1.setRelatedTo(pixels2);
11:21:19 ^
11:21:19/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:68: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
11:21:19 Pixels pixels = pixels1.getRelatedTo();
11:21:19 ^
11:21:19/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:88: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
11:21:19 Assert.assertNull(pixels1.getRelatedTo());
11:21:19 ^
11:21:19/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:106: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
11:21:19 pixels1.setRelatedTo(pixels2);
11:21:19 ^
11:21:19/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:108: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
11:21:19 Pixels pixels = pixels1.getRelatedTo();
11:21:19 ^
11:21:19/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:128: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
11:21:19 Assert.assertNull(pixels1.getRelatedTo());
11:21:19 ^
11:21:19/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:113: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
11:21:19 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
11:21:19 ^
11:21:19/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:147: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
11:21:19 l = svc.getRoiMeasurements(image.getId().getValue(), options);
11:21:19 ^
11:21:19/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:186: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
11:21:19 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
11:21:19 ^
11:21:19/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:221: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
11:21:19 l = svc.getRoiMeasurements(image.getId().getValue(), options);
11:21:19 ^
11:21:19/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/thumbnail/SkipThumbnailsPermissionsTest.java:663: error: cannot find symbol
11:21:19 f.deleteOnExit();
11:21:19 ^
11:21:19 symbol: variable f
11:21:19 location: class SkipThumbnailsPermissionsTest
11:21:19Note: Some input files use unchecked or unsafe operations.
11:21:19Note: Recompile with -Xlint:unchecked for details.
11:21:191 error
11:21:1991 warnings
11:21:2011:21:20BUILD FAILED
11:21:20/home/omero/workspace/OMERO-build/src/build.xml:174: The following error occurred while executing this line:
11:21:20/home/omero/workspace/OMERO-build/src/build.xml:169: The following error occurred while executing this line:
11:21:20/home/omero/workspace/OMERO-build/src/components/antlib/resources/global.xml:316: The following error occurred while executing this line:
11:21:20/home/omero/workspace/OMERO-build/src/components/antlib/resources/lifecycle.xml:263: The following error occurred while executing this line:
11:21:20/home/omero/workspace/OMERO-build/src/components/antlib/resources/lifecycle.xml:157: Compile failed; see the compiler error output for details.
11:21:2011:21:20Total time: 2 minutes 25 seconds
11:21:20Build step 'Execute shell' marked build as failure
11:21:20Archiving artifacts
11:21:20Finished: FAILURE
