14:58:40Started by upstream project "Trigger" build number 8014:58:40originally caused by:
14:58:40 Started by user devspace14:58:40Running as SYSTEM
14:58:40Building remotely on testintegration (swarm rocky9 ice36 java11) in workspace /home/omero/workspace/OMERO-build
14:58:40The recommended git tool is: NONE
14:58:40No credentials specified
14:58:40 > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-build/src/.git # timeout=10
14:58:40Fetching changes from the remote Git repository
14:58:40 > git config remote.origin.url https://github.com/snoopycrimecop/openmicroscopy.git # timeout=10
14:58:40Fetching upstream changes from https://github.com/snoopycrimecop/openmicroscopy.git14:58:40 > git --version # timeout=10
14:58:40 > git --version # 'git version 2.52.0'
14:58:40 > git fetch --tags --force --progress -- https://github.com/snoopycrimecop/openmicroscopy.git +refs/heads/*:refs/remotes/origin/* # timeout=30
14:58:46 > git rev-parse origin/merge_ci^{commit} # timeout=10
14:58:46Checking out Revision 444e77120c4ba0baf3b8184a6e543abdc40639d6 (origin/merge_ci)
14:58:46 > git config core.sparsecheckout # timeout=10
14:58:46 > git checkout -f 444e77120c4ba0baf3b8184a6e543abdc40639d6 # timeout=10
14:58:49Commit message: "Add version.properties to etc/omero.properties"
14:58:49 > git rev-list --no-walk 12c0b08fc96fd9f2145b9c1842ee740826f648b2 # timeout=10
14:58:49Cleaning workspace
14:58:49 > git rev-parse --verify HEAD # timeout=10
14:58:49Resetting working tree
14:58:49 > git reset --hard # timeout=10
14:58:50 > git clean -fdx # timeout=10
14:59:48Copied 6 artifacts from "OMERO-python-superbuild-build" build number 5814:59:48[OMERO-build] $ /bin/bash -xe /tmp/jenkins10271534758802430979.sh
14:59:48+ mv omero-scripts/dist/omero_scripts-5.10.1.dev0.tar.gz .
14:59:48+ cd src
14:59:48+ export OMERO_BRANCH=merge_ci
14:59:48+ OMERO_BRANCH=merge_ci
14:59:48+ OMERO_VEN=/home/omero/workspace/OMERO-build/omero-virtualenv
14:59:48+ rm -rf /home/omero/workspace/OMERO-build/omero-virtualenv
15:00:30+ source /home/omero/settings.env
15:00:30++ OMERO_DB_HOST=pg
15:00:30++ OMERO_DB_USER=postgres
15:00:30++ OMERO_DB_PASS=
15:00:30++ OMERO_ROOT_PASS=omero
15:00:30++ OMERO_DATA_DIR=/OMERO
15:00:30++ export OMERO_DB_USER OMERO_DB_PASS OMERO_ROOT_PASS OMERO_DATA_DIR
15:00:30+ python3.11 -m venv /home/omero/workspace/OMERO-build/omero-virtualenv
15:00:50+ /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl15:00:52Collecting zeroc-ice==3.6.5
15:00:52 Downloading https://github.com/glencoesoftware/zeroc-ice-py-linux-x86_64/releases/download/20240202/zeroc_ice-3.6.5-cp311-cp311-manylinux_2_28_x86_64.whl (37.3 MB)
15:00:55 ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 37.3/37.3 MB 12.9 MB/s eta 0:00:00
15:00:55Installing collected packages: zeroc-ice
15:00:58Successfully installed zeroc-ice-3.6.5
15:00:5815:00:58[notice] A new release of pip available: 22.3.1 -> 26.2.1
15:00:58[notice] To update, run: python3.11 -m pip install --upgrade pip
15:00:58+ /home/omero/workspace/OMERO-build/omero-virtualenv/bin/pip install -U 'setuptools<66' omero-py
15:01:00Requirement already satisfied: setuptools<66 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages (65.5.1)
15:01:00Collecting setuptools<66
15:01:00 Using cached setuptools-65.7.0-py3-none-any.whl (1.2 MB)
15:01:00Collecting omero-py
15:01:00 Using cached omero_py-5.23.0-py3-none-any.whl (2.8 MB)
15:01:00Collecting appdirs
15:01:00 Using cached appdirs-1.4.4-py2.py3-none-any.whl (9.6 kB)
15:01:01Collecting future
15:01:01 Using cached future-1.0.0-py3-none-any.whl (491 kB)
15:01:01Collecting numpy<3,>=2
15:01:01 Using cached numpy-2.4.6-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (16.9 MB)
15:01:02Collecting Pillow>=10.0.0
15:01:02 Using cached pillow-12.3.0-cp311-cp311-manylinux_2_27_x86_64.manylinux_2_28_x86_64.whl (6.9 MB)
15:01:02Collecting PyYAML
15:01:02 Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB)
15:01:02Requirement already satisfied: zeroc-ice<3.7,>=3.6.5 in /home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages (from omero-py) (3.6.5)
15:01:03Collecting requests
15:01:03 Using cached requests-2.34.2-py3-none-any.whl (73 kB)
15:01:03Collecting portalocker
15:01:03 Using cached portalocker-4.3.0-py3-none-any.whl (129 kB)
15:01:03Collecting charset_normalizer<4,>=2
15:01:03 Using cached charset_normalizer-3.5.1-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (262 kB)
15:01:03Collecting idna<4,>=2.5
15:01:03 Using cached idna-3.19-py3-none-any.whl (68 kB)
15:01:03Collecting urllib3<3,>=1.26
15:01:03 Using cached urllib3-2.7.0-py3-none-any.whl (131 kB)
15:01:03Collecting certifi>=2023.5.7
15:01:04 Using cached certifi-2026.7.22-py3-none-any.whl (136 kB)
15:01:04Installing collected packages: appdirs, urllib3, setuptools, PyYAML, portalocker, Pillow, numpy, idna, future, charset_normalizer, certifi, requests, omero-py
15:01:05 Attempting uninstall: setuptools
15:01:05 Found existing installation: setuptools 65.5.1
15:01:05 Uninstalling setuptools-65.5.1:
15:01:06 Successfully uninstalled setuptools-65.5.1
15:01:57Successfully installed Pillow-12.3.0 PyYAML-6.0.3 appdirs-1.4.4 certifi-2026.7.22 charset_normalizer-3.5.1 future-1.0.0 idna-3.19 numpy-2.4.6 omero-py-5.23.0 portalocker-4.3.0 requests-2.34.2 setuptools-65.7.0 urllib3-2.7.0
15:01:5815:01:58[notice] A new release of pip available: 22.3.1 -> 26.2.1
15:01:58[notice] To update, run: python3.11 -m pip install --upgrade pip
15:01:58+ source /home/omero/workspace/OMERO-build/omero-virtualenv/bin/activate
15:01:58++ deactivate nondestructive
15:01:58++ '[' -n '' ']'
15:01:58++ '[' -n '' ']'
15:01:58++ hash -r
15:01:58++ '[' -n '' ']'
15:01:58++ unset VIRTUAL_ENV
15:01:58++ unset VIRTUAL_ENV_PROMPT
15:01:58++ '[' '!' nondestructive = nondestructive ']'
15:01:58++ VIRTUAL_ENV=/home/omero/workspace/OMERO-build/omero-virtualenv
15:01:58++ export VIRTUAL_ENV
15:01:58++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
15:01:58++ PATH=/home/omero/workspace/OMERO-build/omero-virtualenv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
15:01:58++ export PATH
15:01:58++ '[' -n '' ']'
15:01:58++ '[' -z '' ']'
15:01:58++ _OLD_VIRTUAL_PS1=
15:01:58++ PS1='(omero-virtualenv) '
15:01:58++ export PS1
15:01:58++ VIRTUAL_ENV_PROMPT='(omero-virtualenv) '
15:01:58++ export VIRTUAL_ENV_PROMPT
15:01:58++ hash -r
15:01:58+ source docs/hudson/OMERO.sh
15:01:58++ set -e
15:01:58++ set -u
15:01:58++ set -x
15:01:58++ source docs/hudson/functions.sh
15:01:58++ echo Building merge_ci
15:01:58Building merge_ci
15:01:58++ python3 ./build.py build-dev release-all
15:01:58Buildfile: /home/omero/workspace/OMERO-build/src/build.xml
15:01:5915:01:59check-ivy:
15:01:59Creating /home/omero/workspace/OMERO-build/src/etc/local.properties
15:01:59Created dir: /home/omero/workspace/OMERO-build/src/target
15:02:00:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
15:02:00:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
15:02:0215:02:02build-scons:
15:02:02Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
15:02:03No sub-builds to iterate on
15:02:04Entering /home/omero/workspace/OMERO-build/src/components/tools...
15:02:0415:02:04buildlist:
15:02:04:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
15:02:04:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
15:02:0515:02:05clean:
15:02:05Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
15:02:05Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
15:02:0615:02:06python-clean:
15:02:06WARNING: '' not a valid package name; please use only .-separated package names in setup.py
15:02:06/home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages/setuptools/dist.py:543: UserWarning: The version specified ('5.6.3-677-444e77120c-ice36-b67') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
15:02:06 warnings.warn(
15:02:06running clean
15:02:06Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb/omero_version.py
15:02:07Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
15:02:0715:02:07python-clean:
15:02:07WARNING: '' not a valid package name; please use only .-separated package names in setup.py
15:02:07/home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages/setuptools/dist.py:543: UserWarning: The version specified ('5.6.3-677-444e77120c-ice36-b67') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
15:02:07 warnings.warn(
15:02:07running clean
15:02:07Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS/omero_version.py
15:02:08Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
15:02:09Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
15:02:09Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
15:02:0915:02:09python-clean:
15:02:09WARNING: '' not a valid package name; please use only .-separated package names in setup.py
15:02:09/home/omero/workspace/OMERO-build/omero-virtualenv/lib64/python3.11/site-packages/setuptools/dist.py:543: UserWarning: The version specified ('5.6.3-677-444e77120c-ice36-b67') is an invalid version, this may not work as expected with newer versions of setuptools, pip, and PyPI. Please see PEP 440 for more details.
15:02:09 warnings.warn(
15:02:09running clean
15:02:09Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy/omero_version.py
15:02:09Deleting directory /home/omero/workspace/OMERO-build/src/target
15:02:1115:02:11build-scons:
15:02:11Expanding: /home/omero/workspace/OMERO-build/src/lib/repository/scons-local-2.1.0.zip into /home/omero/workspace/OMERO-build/src/target/scons
15:02:1315:02:13build:
15:02:13No sub-builds to iterate on
15:02:13Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
15:02:13Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
15:02:14Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
15:02:15Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
15:02:1515:02:15tools-init:
15:02:15no-op
15:02:1515:02:15retrieve:
15:02:15:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
15:02:15:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
15:04:2515:04:25prepare:
15:04:25Preparing: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs
15:04:25Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/.done
15:04:25Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/src
15:04:25Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
15:04:25Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
15:04:25Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
15:04:25Created dir: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/reports
15:04:25Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
15:04:25Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
15:04:25Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
15:04:25Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
15:04:25Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
15:04:25Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
15:04:25Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources
15:04:25Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes
15:04:2515:04:25pre-compile:
15:04:25Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/glacier2.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
15:04:26Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ice.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
15:04:34Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icegrid.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
15:04:38Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/icestorm.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
15:04:39Expanding: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs/ome-xml.jar into /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated-classes
15:04:4115:04:41compile:
15:04:41no-op
15:04:4215:04:42package:
15:04:42Building jar: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/omero_client.jar
15:04:4515:04:45install:
15:04:45:: delivering :: omero#omero_client;working@5ffef7c1fdfa :: 5.6.3-677-444e77120c-ice36-b67 :: integration :: Mon Aug 31 15:02:14 UTC 2026
15:04:45 delivering ivy file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/ivy.xml
15:04:45:: publishing :: omero#omero_client
15:04:45 published omero_client to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-677-444e77120c-ice36-b67/omero_client-5.6.3-677-444e77120c-ice36-b67.jar
15:04:45 published ivy to /home/omero/workspace/OMERO-build/src/target/repository/omero/omero_client/5.6.3-677-444e77120c-ice36-b67/omero_client-5.6.3-677-444e77120c-ice36-b67.xml
15:04:46Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
15:04:46Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
15:04:4715:04:47retrieve:
15:04:47:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
15:04:47:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
15:04:48Entering /home/omero/workspace/OMERO-build/src/components/tools...
15:04:4815:04:48dist:
15:04:48Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/service-classes/META-INF
15:04:48Created dir: /home/omero/workspace/OMERO-build/src/components/tools/target/lib/server
15:04:48Copying 1 file to /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
15:04:48Expanding: /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts/omero_scripts-5.10.1.dev0.tar.gz into /home/omero/workspace/OMERO-build/src/components/tools/target/downloads/scripts
15:04:48Copying 29 files to /home/omero/workspace/OMERO-build/src/components/tools/target/lib/scripts
15:04:49Copying 29 files to /home/omero/workspace/OMERO-build/src/dist
15:04:49Copied 9 empty directories to 1 empty directory under /home/omero/workspace/OMERO-build/src/dist
15:04:50Entering /home/omero/workspace/OMERO-build/src/components/tests...
15:04:50Entering /home/omero/workspace/OMERO-build/src/components/tests/ui...
15:04:5115:04:51copy-licenses:
15:04:51Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
15:04:51Created dir: /home/omero/workspace/OMERO-build/src/dist/share
15:04:51Copying 44 files to /home/omero/workspace/OMERO-build/src/dist/share
15:04:5215:04:52copy-history:
15:04:52Copying 1 file to /home/omero/workspace/OMERO-build/src/dist
15:04:5215:04:52copy-etc:
15:04:52Copying 28 files to /home/omero/workspace/OMERO-build/src/dist/etc
15:04:52Copying 1 file to /home/omero/workspace/OMERO-build/src/dist/etc/templates
15:04:5315:04:53copy-sql:
15:04:53Copying 60 files to /home/omero/workspace/OMERO-build/src/dist
15:05:2815:05:28copy-server:
15:05:28 conflict on /home/omero/workspace/OMERO-build/src/dist/lib/server/janino.jar in [server]: 3.1.9 won
15:05:28 conflict on /home/omero/workspace/OMERO-build/src/dist/lib/server/annotations.jar in [server]: 2.34.6 won
15:05:3615:05:36copy-client:
15:05:36Created dir: /home/omero/workspace/OMERO-build/src/dist/lib/client
15:05:43 conflict on /home/omero/workspace/OMERO-build/src/dist/lib/client/janino.jar in [client]: 3.1.9 won
15:05:43 conflict on /home/omero/workspace/OMERO-build/src/dist/lib/client/annotations.jar in [client]: 2.34.6 won
15:05:5015:05:50update-version:
15:05:50Copying 1 file to /home/omero/workspace/OMERO-build/src/dist/etc
15:05:5015:05:50create-workdirs:
15:05:50Created dir: /home/omero/workspace/OMERO-build/src/dist/etc/grid
15:05:50Created dir: /home/omero/workspace/OMERO-build/src/dist/var
15:05:50Created dir: /home/omero/workspace/OMERO-build/src/dist/var/tmp
15:05:5015:05:50copy-luts:
15:05:50Created dir: /home/omero/workspace/OMERO-build/src/dist/lib/scripts/luts
15:05:50Copying 47 files to /home/omero/workspace/OMERO-build/src/dist/lib/scripts/luts
15:05:5115:05:51test-compile:
15:05:51:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
15:05:51Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroFS...
15:05:52Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
15:05:52Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroPy...
15:05:52Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
15:05:52Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroWeb...
15:05:53Entering /home/omero/workspace/OMERO-build/src/components/tests/ui...
15:05:54Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
15:05:5415:05:54testng-init:
15:05:54:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
15:05:54:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
15:06:0215:06:02,153 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.16
15:06:0215:06:02,156 |-INFO in ch.qos.logback.classic.util.ContextInitializer@b7f53a5 - No custom configurators were discovered as a service.
15:06:0215:06:02,156 |-INFO in ch.qos.logback.classic.util.ContextInitializer@b7f53a5 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
15:06:0215:06:02,159 |-INFO in ch.qos.logback.classic.util.ContextInitializer@b7f53a5 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
15:06:0215:06:02,164 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
15:06:0215:06:02,167 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
15:06:0215:06:02,168 |-INFO in ch.qos.logback.classic.util.ContextInitializer@b7f53a5 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 9 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
15:06:0215:06:02,168 |-INFO in ch.qos.logback.classic.util.ContextInitializer@b7f53a5 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
15:06:0215:06:02,170 |-INFO in ch.qos.logback.classic.util.ContextInitializer@b7f53a5 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
15:06:0215:06:02,174 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
15:06:0215:06:02,175 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes/logback.xml]
15:06:0215:06:02,178 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@4df1bec - Resource [logback.xml] occurs multiple times on the classpath.
15:06:0215:06:02,178 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@4df1bec - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/classes/logback.xml]
15:06:0215:06:02,178 |-WARN in ch.qos.logback.classic.util.DefaultJoranConfigurator@4df1bec - Resource [logback.xml] occurs at [file:/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/generated/resources/logback.xml]
15:06:0215:06:02,399 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stderr]
15:06:0215:06:02,399 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
15:06:0215:06:02,420 |-INFO in ch.qos.logback.core.model.processor.ImplicitModelHandler - Assuming default type [ch.qos.logback.classic.encoder.PatternLayoutEncoder] for [encoder] property
15:06:0215:06:02,422 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@22e9424e - As of version 1.2.0 "immediateFlush" property should be set within the enclosing Appender.
15:06:0215:06:02,422 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@22e9424e - Please move "immediateFlush" property into the enclosing appender.
15:06:0215:06:02,484 |-WARN in ch.qos.logback.classic.encoder.PatternLayoutEncoder@22e9424e - Setting the "immediateFlush" property of the enclosing appender to true
15:06:0215:06:02,485 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [velocity] to ERROR
15:06:0215:06:02,485 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [org] to ERROR
15:06:0215:06:02,485 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [ome] to ERROR
15:06:0215:06:02,485 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci] to ERROR
15:06:0215:06:02,485 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to WARN
15:06:0215:06:02,485 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stderr] to Logger[ROOT]
15:06:0215:06:02,487 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@3afab566 - End of configuration.
15:06:0215:06:02,489 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@4b693be7 - Registering current configuration as safe fallback point
15:06:0215:06:02,489 |-INFO in ch.qos.logback.classic.util.ContextInitializer@b7f53a5 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 319 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
15:06:0215:06:02lifecycle.test-compile:
15:06:02Copying 3 files to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
15:06:02Compiling 86 source files to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/test-classes
15:06:03warning: [options] bootstrap class path not set in conjunction with -source 8
15:06:03warning: [options] source value 8 is obsolete and will be removed in a future release
15:06:03warning: [options] target value 8 is obsolete and will be removed in a future release
15:06:03warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
15:06:06/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/AbstractServerTest.java:61: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
15:06:06import omero.grid.RawAccessRequest;
15:06:06 ^
15:06:06/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:32: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
15:06:06import omero.grid.RawAccessRequest;
15:06:06 ^
15:06:06/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:53: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
15:06:06import omero.grid.RawAccessRequest;
15:06:06 ^
15:06:06/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:31: warning: [deprecation] ImportJob in omero.model has been deprecated
15:06:06import omero.model.ImportJob;
15:06:06 ^
15:06:06/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:32: warning: [deprecation] ImportJobI in omero.model has been deprecated
15:06:06import omero.model.ImportJobI;
15:06:06 ^
15:06:07/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ModelMockFactory.java:1207: warning: [deprecation] newInstance() in Class has been deprecated
15:06:07 IObject link = (IObject) linkClass.newInstance();
15:06:07 ^
15:06:07 where T is a type-variable:
15:06:07 T extends Object declared in class Class
15:06:07/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/CreatePojosFixture2.java:269: warning: [deprecation] newInstance() in Class has been deprecated
15:06:07 T copy = (T) obj.getClass().newInstance();
15:06:07 ^
15:06:07 where T is a type-variable:
15:06:07 T extends Object declared in class Class
15:06:07/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
15:06:07 RawAccessRequest raw = new RawAccessRequest();
15:06:07 ^
15:06:07/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:418: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
15:06:07 RawAccessRequest raw = new RawAccessRequest();
15:06:07 ^
15:06:07/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:419: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
15:06:07 raw.repoUuid = legacy.root().getHash().getValue();
15:06:07 ^
15:06:07/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:420: warning: [deprecation] command in RawAccessRequest has been deprecated
15:06:07 raw.command = "rm";
15:06:07 ^
15:06:07/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DeleteServiceFilesTest.java:421: warning: [deprecation] args in RawAccessRequest has been deprecated
15:06:07 raw.args = Arrays.asList(path);
15:06:07 ^
15:06:08/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DiskUsageTest.java:156: warning: [deprecation] newInstance() in Class has been deprecated
15:06:08 final IObject link = linkClass.newInstance();
15:06:08 ^
15:06:08 where T is a type-variable:
15:06:08 T extends Object declared in class Class
15:06:08/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/DuplicationTest.java:1332: warning: [deprecation] newInstance() in Class has been deprecated
15:06:08 originalLink.setChild(annotationClass.newInstance());
15:06:08 ^
15:06:08 where T is a type-variable:
15:06:08 T extends Object declared in class Class
15:06:08/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ImporterTest.java:1088: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
15:06:08 RoiResult r = svc.findByImage(id, new RoiOptions());
15:06:08 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
15:06:09 final RawAccessRequest request = new RawAccessRequest();
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:900: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
15:06:09 final RawAccessRequest request = new RawAccessRequest();
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:901: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
15:06:09 request.repoUuid = repo.root().getHash().getValue();
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:902: warning: [deprecation] command in RawAccessRequest has been deprecated
15:06:09 request.command = "exists";
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:903: warning: [deprecation] args in RawAccessRequest has been deprecated
15:06:09 request.args = Collections.singletonList(dirPath);
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
15:06:09 final RawAccessRequest request = new RawAccessRequest();
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:939: warning: [deprecation] RawAccessRequest in omero.grid has been deprecated
15:06:09 final RawAccessRequest request = new RawAccessRequest();
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:940: warning: [deprecation] repoUuid in RawAccessRequest has been deprecated
15:06:09 request.repoUuid = repo.root().getHash().getValue();
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:941: warning: [deprecation] command in RawAccessRequest has been deprecated
15:06:09 request.command = "exists";
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ManagedRepositoryTest.java:942: warning: [deprecation] args in RawAccessRequest has been deprecated
15:06:09 request.args = Collections.singletonList(dirName);
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ModelMockFactoryTest.java:60: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
15:06:09 RoiResult result = roiSvc.findByImage(imageId, new RoiOptions());
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJob in omero.model has been deprecated
15:06:09 final ImportJob importJob = new ImportJobI();
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:255: warning: [deprecation] ImportJobI in omero.model has been deprecated
15:06:09 final ImportJob importJob = new ImportJobI();
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:266: warning: [deprecation] setImageName(RString) in ImportJob has been deprecated
15:06:09 importJob.setImageName(omero.rtypes.rstring(name));
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:268: warning: [deprecation] setImageDescription(RString) in ImportJob has been deprecated
15:06:09 importJob.setImageDescription(omero.rtypes.rstring(desc));
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
15:06:09 ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:273: warning: [deprecation] ImportJob in omero.model has been deprecated
15:06:09 ImportJob sent = (ImportJob) iUpdate.saveAndReturnObject(importJob);
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:274: warning: [deprecation] getImageName() in ImportJob has been deprecated
15:06:09 final String savedName = sent.getImageName().getValue().toString();
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:275: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
15:06:09 final String savedDesc = sent.getImageDescription().getValue().toString();
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
15:06:09 final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:277: warning: [deprecation] ImportJob in omero.model has been deprecated
15:06:09 final ImportJob retrievedImportJob = (ImportJob) iQuery.get("ImportJob", id);
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:278: warning: [deprecation] getImageName() in ImportJob has been deprecated
15:06:09 final String retrievedName = retrievedImportJob.getImageName().getValue().toString();
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/ObjectPropertiesTest.java:279: warning: [deprecation] getImageDescription() in ImportJob has been deprecated
15:06:09 final String retrievedDesc = retrievedImportJob.getImageDescription().getValue().toString();
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:141: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
15:06:09 RoiResult r = svc.findByImage(image.getId().getValue(),
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:190: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
15:06:09 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:220: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
15:06:09 l = svc.getRoiMeasurements(image.getId().getValue(), options);
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:241: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
15:06:09 l = svc.getRoiMeasurements(image.getId().getValue(), options);
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:313: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
15:06:09 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:320: warning: [deprecation] getMeasuredRoisMap(long,List<Long>,RoiOptions) in IRoiPrx has been deprecated
15:06:09 Map<Long, RoiResult> values = svc.getMeasuredRoisMap(image.getId()
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:386: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
15:06:09 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:390: warning: [deprecation] getTable(long) in IRoiPrx has been deprecated
15:06:09 table = svc.getTable(f.getId().getValue());
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:412: warning: [deprecation] findByImage(long,RoiOptions) in IRoiPrx has been deprecated
15:06:09 RoiResult r = svc.findByImage(image.getId().getValue(),
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:426: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
15:06:09 r = svc.findByRoi(r1.getId().getValue(), new RoiOptions());
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:437: warning: [deprecation] findByRoi(long,RoiOptions) in IRoiPrx has been deprecated
15:06:09 r = svc.findByRoi(r2.getId().getValue(), new RoiOptions());
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:448: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
15:06:09 r = svc.findByPlane(image.getId().getValue(), 1, 0, new RoiOptions());
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:459: warning: [deprecation] findByPlane(long,int,int,RoiOptions) in IRoiPrx has been deprecated
15:06:09 r = svc.findByPlane(image.getId().getValue(), 1, 1, new RoiOptions());
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
15:06:09 null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:733: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
15:06:09 null, new Integer(0), new Integer(0), new int[] {0}, "null ids"});
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
15:06:09 new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:735: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
15:06:09 new ArrayList<Long>(), new Integer(0), new Integer(0), new int[] {0},
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [removal] Long(long) in Long has been deprecated and marked for removal
15:06:09 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
15:06:09 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:738: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
15:06:09 Arrays.asList(new Long[] {new Long (-1)}), new Integer(0), new Integer(0),
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
15:06:09 inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:740: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
15:06:09 inputs.add(new Object[] { ids, new Integer(10), new Integer(10), new int[] {0},
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
15:06:09 inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:742: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
15:06:09 inputs.add(new Object[] { ids, new Integer(0), new Integer(-10), new int[] {0},
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
15:06:09 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:744: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
15:06:09 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {200},
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
15:06:09 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:746: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
15:06:09 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), null,
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
15:06:09 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:748: warning: [removal] Integer(int) in Integer has been deprecated and marked for removal
15:06:09 inputs.add(new Object[] { ids, new Integer(0), new Integer(0), new int[] {},
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:755: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
15:06:09 svc.getShapeStatsRestricted(
15:06:09 ^
15:06:09/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/RoiServiceTest.java:764: warning: [deprecation] getShapeStatsRestricted(List<Long>,int,int,int[]) in IRoiPrx has been deprecated
15:06:09 final ShapeStats [] stats = svc.getShapeStatsRestricted(ids, 0, 0, new int[] {0});
15:06:09 ^
15:06:10/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/chgrp/HierarchyMoveTest.java:1030: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
15:06:10 projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
15:06:10 ^
15:06:10/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:478: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
15:06:10 request.typesToIgnore = Collections.singletonList("TagAnnotation");
15:06:10 ^
15:06:10/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:495: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
15:06:10 request.typesToIgnore = Collections.singletonList("IAnnotationLink");
15:06:10 ^
15:06:10/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:501: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
15:06:10 request.typesToIgnore = Collections.singletonList("Annotation");
15:06:10 ^
15:06:10/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/AnnotationDeleteTest.java:547: warning: [deprecation] typesToIgnore in Delete2 has been deprecated
15:06:10 request.typesToIgnore = Collections.singletonList("Annotation");
15:06:10 ^
15:06:10/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/HierarchyDeleteTest.java:537: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
15:06:10 projection.getPrimaryPixels().setRelatedTo((Pixels) original.getPrimaryPixels().proxy());
15:06:10 ^
15:06:10/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:37: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
15:06:10 p2.setRelatedTo(p1);
15:06:10 ^
15:06:10/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:39: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
15:06:10 Assert.assertEquals(p1.getId(), p2.getRelatedTo().getId());
15:06:10 ^
15:06:10/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:66: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
15:06:10 pixels1.setRelatedTo(pixels2);
15:06:10 ^
15:06:10/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:68: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
15:06:10 Pixels pixels = pixels1.getRelatedTo();
15:06:10 ^
15:06:10/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:88: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
15:06:10 Assert.assertNull(pixels1.getRelatedTo());
15:06:10 ^
15:06:10/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:106: warning: [deprecation] setRelatedTo(Pixels) in Pixels has been deprecated
15:06:10 pixels1.setRelatedTo(pixels2);
15:06:10 ^
15:06:10/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:108: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
15:06:10 Pixels pixels = pixels1.getRelatedTo();
15:06:10 ^
15:06:10/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RelatedToTest.java:128: warning: [deprecation] getRelatedTo() in Pixels has been deprecated
15:06:10 Assert.assertNull(pixels1.getRelatedTo());
15:06:10 ^
15:06:10/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:113: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
15:06:10 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
15:06:10 ^
15:06:10/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:147: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
15:06:10 l = svc.getRoiMeasurements(image.getId().getValue(), options);
15:06:10 ^
15:06:10/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:186: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
15:06:10 List<Annotation> l = svc.getRoiMeasurements(image.getId().getValue(),
15:06:10 ^
15:06:10/home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/test/integration/delete/RoiDeleteTest.java:221: warning: [deprecation] getRoiMeasurements(long,RoiOptions) in IRoiPrx has been deprecated
15:06:10 l = svc.getRoiMeasurements(image.getId().getValue(), options);
15:06:10 ^
15:06:11Note: Some input files use unchecked or unsafe operations.
15:06:11Note: Recompile with -Xlint:unchecked for details.
15:06:1192 warnings
15:06:11Deleting: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/_omero_build_552522388.tmp
15:06:11Building jar: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/OmeroJava-test.jar
15:06:11:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
15:06:11:: delivering :: omero#OmeroJava-test;working@5ffef7c1fdfa :: 5.6.3-677-444e77120c-ice36-b67 :: integration :: Mon Aug 31 15:05:53 UTC 2026
15:06:11 delivering ivy file to /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/OmeroJava-test.xml
15:06:11:: publishing :: omero#OmeroJava-test
15:06:11 published OmeroJava-test to /home/omero/workspace/OMERO-build/src/target/test-repository/OmeroJava-test-5.6.3-677-444e77120c-ice36-b67.jar
15:06:11 published ivy to /home/omero/workspace/OMERO-build/src/target/test-repository/OmeroJava-test-5.6.3-677-444e77120c-ice36-b67.xml
15:06:1115:06:11build-eclipse:
15:06:11No sub-builds to iterate on
15:06:12Entering /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava...
15:06:1215:06:12retrieve:
15:06:12:: Apache Ivy 2.4.0 - 20141213170938 :: http://ant.apache.org/ivy/ ::
15:06:12:: loading settings :: file = /home/omero/workspace/OMERO-build/src/etc/ivysettings.xml
15:06:1715:06:17prepare:
15:06:17Preparing: /home/omero/workspace/OMERO-build/src/components/tools/OmeroJava/target/libs
15:06:2115:06:21release-clients:
15:06:21Building zip: /home/omero/workspace/OMERO-build/src/target/OMERO.java-5.6.3-677-444e77120c-ice36-b67.zip
15:06:2815:06:28release-zip:
15:06:28Building zip: /home/omero/workspace/OMERO-build/src/target/OMERO.server-5.6.3-677-444e77120c-ice36-b67.zip
15:06:4215:06:42BUILD SUCCESSFUL
15:06:42Total time: 4 minutes 44 seconds
15:06:42++ '[' -d .git ']'
15:06:42++ python3 ./build.py release-src
15:06:42Buildfile: /home/omero/workspace/OMERO-build/src/build.xml
15:06:4315:06:43release-src-git:
15:06:43Releasing openmicroscopy-5.6.3-677-444e77120c-ice36-b67
15:06:45 - creating /home/omero/workspace/OMERO-build/src/target/openmicroscopy-5.6.3-677-444e77120c-ice36-b67.zip
15:06:45 - repacking /home/omero/workspace/OMERO-build/src/target/openmicroscopy-5.6.3-677-444e77120c-ice36-b67-base.zip
15:06:4715:06:47BUILD SUCCESSFUL
15:06:47Total time: 4 seconds
15:06:47++ echo BUILD_NUMBER=67
15:06:47++ echo OMERO_BRANCH=merge_ci
15:06:47++ git_info
15:06:47+++ git rev-parse HEAD
15:06:47++ HEAD=444e77120c4ba0baf3b8184a6e543abdc40639d6
15:06:47++ git log --max-count=1 444e77120c4ba0baf3b8184a6e543abdc40639d6
15:06:47++ env
15:06:47++ sort
15:06:47Archiving artifacts
15:07:05Finished: SUCCESS
