Started by upstream project "Trigger" build number 190 originally caused by: Started by user devspace [Pipeline] Start of Pipeline [Pipeline] node Running on testintegration in /home/omero/workspace/OMERO-plugins-push [Pipeline] { [Pipeline] library Loading library recursiveMerge@master Attempting to resolve master from remote references... > git --version # timeout=10 > git --version # 'git version 2.47.3' > git ls-remote -- https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Found match: refs/heads/master revision 654fab96d71411fab33e55b79057bcbf94eef8a2 The recommended git tool is: NONE No credentials specified > git rev-parse --resolve-git-dir /var/jenkins_home/jobs/OMERO-plugins-push/workspace@libs/80042be2aab2f4c47851263660cdf7971582cd0b3548009ec2196c6f3069ef1a/.git # timeout=10 Fetching changes from the remote Git repository > git config remote.origin.url https://github.com/ome/jenkins-library-recursivemerge.git # timeout=10 Fetching without tags Fetching upstream changes from https://github.com/ome/jenkins-library-recursivemerge.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --no-tags --force --progress -- https://github.com/ome/jenkins-library-recursivemerge.git +refs/heads/*:refs/remotes/origin/* # timeout=10 Checking out Revision 654fab96d71411fab33e55b79057bcbf94eef8a2 (master) > git config core.sparsecheckout # timeout=10 > git checkout -f 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 Commit message: "Merge pull request #18 from jburel/python_311" > git rev-list --no-walk 654fab96d71411fab33e55b79057bcbf94eef8a2 # timeout=10 [Pipeline] checkout The recommended git tool is: NONE No credentials specified Fetching changes from the remote Git repository Checking out Revision 84258d5f2eea775a37267d49c87b3698bcfa5d38 (refs/remotes/origin/master) > git rev-parse --resolve-git-dir /home/omero/workspace/OMERO-plugins-push/.git # timeout=10 > git config remote.origin.url https://github.com/ome/omero-plugins.git # timeout=10 Fetching upstream changes from https://github.com/ome/omero-plugins.git > git --version # timeout=10 > git --version # 'git version 2.47.3' > git fetch --tags --force --progress -- https://github.com/ome/omero-plugins.git +refs/heads/*:refs/remotes/origin/* # timeout=10 > git rev-parse refs/remotes/origin/master^{commit} # timeout=10 > git config core.sparsecheckout # timeout=10 > git checkout -f 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Commit message: "Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378" > git rev-list --no-walk 84258d5f2eea775a37267d49c87b3698bcfa5d38 # timeout=10 Cleaning workspace > git rev-parse --verify HEAD # timeout=10 Resetting working tree > git reset --hard # timeout=10 > git clean -fdx # timeout=10 > git submodule foreach --recursive git reset --hard # timeout=10 > git submodule foreach --recursive git clean -fdx # timeout=10 > git remote # timeout=10 > git submodule init # timeout=10 > git submodule sync # timeout=10 > git config --get remote.origin.url # timeout=10 > git submodule init # timeout=10 > git config -f .gitmodules --get-regexp ^submodule\.(.+)\.url # timeout=10 > git config --get submodule.omero-figure.url # timeout=10 > git config -f .gitmodules --get submodule.omero-figure.path # timeout=10 > git config --get submodule.minimal-omero-client.url # timeout=10 > git config -f .gitmodules --get submodule.minimal-omero-client.path # timeout=10 > git config --get submodule.scripts.url # timeout=10 > git config -f .gitmodules --get submodule.scripts.path # timeout=10 > git config --get submodule.omero-test-infra.url # timeout=10 > git config -f .gitmodules --get submodule.omero-test-infra.path # timeout=10 > git config --get submodule.omero-prometheus-tools.url # timeout=10 > git config -f .gitmodules --get submodule.omero-prometheus-tools.path # timeout=10 > git config --get submodule.omero-parade.url # timeout=10 > git config -f .gitmodules --get submodule.omero-parade.path # timeout=10 > git config --get submodule.omero-mapr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-mapr.path # timeout=10 > git config --get submodule.omero-fpbioimage.url # timeout=10 > git config -f .gitmodules --get submodule.omero-fpbioimage.path # timeout=10 > git config --get submodule.omero-iviewer.url # timeout=10 > git config -f .gitmodules --get submodule.omero-iviewer.path # timeout=10 > git config --get submodule.omero-gallery.url # timeout=10 > git config -f .gitmodules --get submodule.omero-gallery.path # timeout=10 > git config --get submodule.rOMERO-gateway.url # timeout=10 > git config -f .gitmodules --get submodule.rOMERO-gateway.path # timeout=10 > git config --get submodule.omero-weberror.url # timeout=10 > git config -f .gitmodules --get submodule.omero-weberror.path # timeout=10 > git config --get submodule.omero-cli-render.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-render.path # timeout=10 > git config --get submodule.omero-cli-duplicate.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-duplicate.path # timeout=10 > git config --get submodule.omero-metadata.url # timeout=10 > git config -f .gitmodules --get submodule.omero-metadata.path # timeout=10 > git config --get submodule.omero-webtest.url # timeout=10 > git config -f .gitmodules --get submodule.omero-webtest.path # timeout=10 > git config --get submodule.omero-upload.url # timeout=10 > git config -f .gitmodules --get submodule.omero-upload.path # timeout=10 > git config --get submodule.omero-virtual-microscope.url # timeout=10 > git config -f .gitmodules --get submodule.omero-virtual-microscope.path # timeout=10 > git config --get submodule.omero-rois.url # timeout=10 > git config -f .gitmodules --get submodule.omero-rois.path # timeout=10 > git config --get submodule.omero-signup.url # timeout=10 > git config -f .gitmodules --get submodule.omero-signup.path # timeout=10 > git config --get submodule.omero-web-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-web-zarr.path # timeout=10 > git config --get submodule.omero-cli-zarr.url # timeout=10 > git config -f .gitmodules --get submodule.omero-cli-zarr.path # timeout=10 > git submodule update --init --recursive omero-figure # timeout=10 > git submodule update --init --recursive minimal-omero-client # timeout=10 > git submodule update --init --recursive scripts # timeout=10 > git submodule update --init --recursive omero-test-infra # timeout=10 > git submodule update --init --recursive omero-prometheus-tools # timeout=10 > git submodule update --init --recursive omero-parade # timeout=10 > git submodule update --init --recursive omero-mapr # timeout=10 > git submodule update --init --recursive omero-fpbioimage # timeout=10 > git submodule update --init --recursive omero-iviewer # timeout=10 > git submodule update --init --recursive omero-gallery # timeout=10 > git submodule update --init --recursive rOMERO-gateway # timeout=10 > git submodule update --init --recursive omero-weberror # timeout=10 > git submodule update --init --recursive omero-cli-render # timeout=10 > git submodule update --init --recursive omero-cli-duplicate # timeout=10 > git submodule update --init --recursive omero-metadata # timeout=10 > git submodule update --init --recursive omero-webtest # timeout=10 > git submodule update --init --recursive omero-upload # timeout=10 > git submodule update --init --recursive omero-virtual-microscope # timeout=10 > git submodule update --init --recursive omero-rois # timeout=10 [Pipeline] pwd [Pipeline] copyArtifacts Copied 1 artifact from "OMERO-build-push" build number 168 [Pipeline] sh > git submodule update --init --recursive omero-signup # timeout=10 > git submodule update --init --recursive omero-web-zarr # timeout=10 > git submodule update --init --recursive omero-cli-zarr # timeout=10 + pushd build ~/workspace/OMERO-plugins-push/build ~/workspace/OMERO-plugins-push + curl -sfL https://github.com/ome/build-infra/archive/master.tar.gz + tar -zxf - + popd ~/workspace/OMERO-plugins-push + python3.11 -m venv build/venv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + python3.11 -m pip install -U pip Requirement already satisfied: pip in ./build/venv/lib64/python3.11/site-packages (22.3.1) Collecting pip Using cached pip-26.1.1-py3-none-any.whl (1.8 MB) Installing collected packages: pip Attempting uninstall: pip Found existing installation: pip 22.3.1 Uninstalling pip-22.3.1: Successfully uninstalled pip-22.3.1 Successfully installed pip-26.1.1 + python3.11 -m pip install scc Collecting scc Using cached scc-0.20.0-py3-none-any.whl.metadata (3.6 kB) Collecting PyGithub>=1.54 (from scc) Using cached pygithub-2.9.1-py3-none-any.whl.metadata (3.9 kB) Collecting PyYAML>=5.1 (from scc) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (2.4 kB) Collecting future (from scc) Using cached future-1.0.0-py3-none-any.whl.metadata (4.0 kB) Collecting ruamel.yaml (from scc) Using cached ruamel_yaml-0.19.1-py3-none-any.whl.metadata (16 kB) Collecting ruamel.yaml.jinja2 (from scc) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl.metadata (2.9 kB) Collecting six (from scc) Using cached six-1.17.0-py2.py3-none-any.whl.metadata (1.7 kB) Collecting urllib3<2 (from scc) Using cached urllib3-1.26.20-py2.py3-none-any.whl.metadata (50 kB) Collecting yaclifw<0.3,>=0.2.0 (from scc) Using cached yaclifw-0.2.0-py3-none-any.whl Collecting pynacl>=1.4.0 (from PyGithub>=1.54->scc) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl.metadata (10.0 kB) Collecting requests>=2.14.0 (from PyGithub>=1.54->scc) Using cached requests-2.33.1-py3-none-any.whl.metadata (4.8 kB) Collecting pyjwt>=2.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pyjwt-2.12.1-py3-none-any.whl.metadata (4.1 kB) Collecting typing-extensions>=4.5.0 (from PyGithub>=1.54->scc) Using cached typing_extensions-4.15.0-py3-none-any.whl.metadata (3.3 kB) Collecting cryptography>=3.4.0 (from pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cryptography-48.0.0-cp311-abi3-manylinux_2_34_x86_64.whl.metadata (4.3 kB) Collecting cffi>=2.0.0 (from cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl.metadata (2.6 kB) Collecting pycparser (from cffi>=2.0.0->cryptography>=3.4.0->pyjwt[crypto]>=2.4.0->PyGithub>=1.54->scc) Using cached pycparser-3.0-py3-none-any.whl.metadata (8.2 kB) Collecting charset_normalizer<4,>=2 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached charset_normalizer-3.4.7-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl.metadata (40 kB) Collecting idna<4,>=2.5 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached idna-3.13-py3-none-any.whl.metadata (8.0 kB) Collecting certifi>=2023.5.7 (from requests>=2.14.0->PyGithub>=1.54->scc) Using cached certifi-2026.4.22-py3-none-any.whl.metadata (2.5 kB) Using cached scc-0.20.0-py3-none-any.whl (48 kB) Using cached urllib3-1.26.20-py2.py3-none-any.whl (144 kB) Using cached pygithub-2.9.1-py3-none-any.whl (449 kB) Using cached pyjwt-2.12.1-py3-none-any.whl (29 kB) Using cached cryptography-48.0.0-cp311-abi3-manylinux_2_34_x86_64.whl (4.7 MB) Using cached cffi-2.0.0-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.whl (215 kB) Using cached pynacl-1.6.2-cp38-abi3-manylinux_2_34_x86_64.whl (1.4 MB) Using cached pyyaml-6.0.3-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (806 kB) Using cached requests-2.33.1-py3-none-any.whl (64 kB) Using cached charset_normalizer-3.4.7-cp311-cp311-manylinux2014_x86_64.manylinux_2_17_x86_64.manylinux_2_28_x86_64.whl (214 kB) Using cached idna-3.13-py3-none-any.whl (68 kB) Using cached certifi-2026.4.22-py3-none-any.whl (135 kB) Using cached typing_extensions-4.15.0-py3-none-any.whl (44 kB) Using cached future-1.0.0-py3-none-any.whl (491 kB) Using cached pycparser-3.0-py3-none-any.whl (48 kB) Using cached ruamel_yaml-0.19.1-py3-none-any.whl (118 kB) Using cached ruamel.yaml.jinja2-0.2.7-py2.py3-none-any.whl (5.5 kB) Using cached six-1.17.0-py2.py3-none-any.whl (11 kB) Installing collected packages: urllib3, typing-extensions, six, ruamel.yaml, PyYAML, pyjwt, pycparser, idna, future, charset_normalizer, certifi, yaclifw, ruamel.yaml.jinja2, requests, cffi, pynacl, cryptography, PyGithub, scc Successfully installed PyGithub-2.9.1 PyYAML-6.0.3 certifi-2026.4.22 cffi-2.0.0 charset_normalizer-3.4.7 cryptography-48.0.0 future-1.0.0 idna-3.13 pycparser-3.0 pyjwt-2.12.1 pynacl-1.6.2 requests-2.33.1 ruamel.yaml-0.19.1 ruamel.yaml.jinja2-0.2.7 scc-0.20.0 six-1.17.0 typing-extensions-4.15.0 urllib3-1.26.20 yaclifw-0.2.0 [Pipeline] sh + export BASE_REPO=omero-plugins.git + BASE_REPO=omero-plugins.git + export BASE_BRANCH=master + BASE_BRANCH=master + export VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + VERSION_LOG=/home/omero/workspace/OMERO-plugins-push/build/version.tsv + . build/venv/bin/activate ++ deactivate nondestructive ++ '[' -n '' ']' ++ '[' -n '' ']' ++ hash -r ++ '[' -n '' ']' ++ unset VIRTUAL_ENV ++ unset VIRTUAL_ENV_PROMPT ++ '[' '!' nondestructive = nondestructive ']' ++ VIRTUAL_ENV=/home/omero/workspace/OMERO-plugins-push/build/venv ++ export VIRTUAL_ENV ++ _OLD_VIRTUAL_PATH=/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ PATH=/home/omero/workspace/OMERO-plugins-push/build/venv/bin:/opt/ice-3.6.5/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin ++ export PATH ++ '[' -n '' ']' ++ '[' -z '' ']' ++ _OLD_VIRTUAL_PS1= ++ PS1='(venv) ' ++ export PS1 ++ VIRTUAL_ENV_PROMPT='(venv) ' ++ export VIRTUAL_ENV_PROMPT ++ hash -r + '[' merge_ci '!=' null ']' + export PUSH_BRANCH=merge_ci + PUSH_BRANCH=merge_ci + '[' null '!=' null ']' + export STATUS=success-only 'MERGE_OPTIONS=-vvv --no-ask --reset --comment' + STATUS=success-only + MERGE_OPTIONS='-vvv --no-ask --reset --comment' + bash build/build-infra-master/recursive-merge Merge base repository (no submodule updates) 2026-05-05 07:40:05,363 [ scc.config] DEBUG Found github.token 2026-05-05 07:40:05,364 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-05-05 07:40:05,614 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:40:06,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:40:06,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-05-05 07:40:06,460 [ scc.gh] DEBUG 4947 remaining from 5000 (Reset at 08:05 2026-05-05 07:40:06,460 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-05 07:40:06,463 [ scc.git] DEBUG Check current status 2026-05-05 07:40:06,463 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-05 07:40:06,466 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-05-05 07:40:06,466 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-05 07:40:06,513 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-05-05 07:40:06,516 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-05-05 07:40:06,519 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-05-05 07:40:06,522 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-05-05 07:40:06,526 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-05-05 07:40:06,529 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-05-05 07:40:06,532 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-05-05 07:40:06,535 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2026-05-05 07:40:06,538 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-05-05 07:40:06,541 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-05-05 07:40:06,544 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-05-05 07:40:06,546 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-05-05 07:40:06,550 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-05-05 07:40:06,553 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-05-05 07:40:06,556 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-05-05 07:40:06,559 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-05-05 07:40:06,561 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-05-05 07:40:06,564 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-05-05 07:40:06,566 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-05-05 07:40:06,569 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-05-05 07:40:06,572 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-05-05 07:40:06,575 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-05-05 07:40:06,578 [ scc.config] DEBUG Found remote.origin.url 2026-05-05 07:40:07,040 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-05-05 07:40:07,560 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-05 07:40:08,031 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-05 07:40:08,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-05 07:40:09,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-05 07:40:09,134 [ scc.git] DEBUG Resetting... 2026-05-05 07:40:09,134 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-05-05 07:40:09,142 [ scc.git] DEBUG HEAD is now at 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-05-05 07:40:09,142 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-05-05 07:40:09,239 [ scc.git] DEBUG Check current status 2026-05-05 07:40:09,240 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-05 07:40:09,242 [ scc.git] DEBUG 84258d5 Merge pull request #426 from ome/dependabot/submodules/omero-prometheus-tools-eb47378 2026-05-05 07:40:09,242 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-05 07:40:09,285 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-05-05 07:40:09,287 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-05-05 07:40:09,290 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-05-05 07:40:09,293 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-05-05 07:40:09,297 [ scc.git] DEBUG fb316a7ee6ca8aa5bc8dc55dd0acfa88fe3ca228 omero-figure (v7.2.0-1-gfb316a7e) 2026-05-05 07:40:09,300 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-05-05 07:40:09,303 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-05-05 07:40:09,305 [ scc.git] DEBUG b4102d46958a805cacff0c7ccceb05ccff746309 omero-iviewer (v0.15.0-1-gb4102d4) 2026-05-05 07:40:09,308 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-05-05 07:40:09,311 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-05-05 07:40:09,314 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-05-05 07:40:09,316 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-05-05 07:40:09,320 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-05-05 07:40:09,322 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-05-05 07:40:09,325 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-05-05 07:40:09,328 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-05-05 07:40:09,330 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-05-05 07:40:09,333 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-05-05 07:40:09,335 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-05-05 07:40:09,338 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-05-05 07:40:09,341 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-05-05 07:40:09,344 [ scc.git] DEBUG 312afbed633613e1f728a1fe9eaac096e54318e0 scripts (v5.8.3-1-g312afbe) 2026-05-05 07:40:09,344 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-05-05 07:40:09,345 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-05-05 07:40:09,345 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-05-05 07:40:09,345 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-05-05 07:40:09,345 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-05-05 07:40:09,345 [ scc.repo] DEBUG ## PRs found: 2026-05-05 07:40:09,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-05-05 07:40:10,565 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-05-05 07:40:10,566 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-05 07:40:10,566 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-05-05 07:40:11,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-05-05 07:40:11,176 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-05 07:40:11,176 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-05-05 07:40:11,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-05-05 07:40:11,783 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-05 07:40:11,783 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-05-05 07:40:11,783 [ scc.repo] DEBUG ## Branches found: 2026-05-05 07:40:11,784 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:40:11,784 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:40:11,786 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-05 07:40:11,789 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-05 07:40:11,789 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-05 07:40:11,791 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-05 07:40:11,794 [ scc.git] DEBUG Already up to date. 2026-05-05 07:40:11,794 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-05-05 07:40:12,172 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-05-05 07:40:12,172 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-05-05 07:40:12,177 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-05-05 07:40:12,502 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-05-05 07:40:12,502 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-05-05 07:40:12,507 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-05-05 07:40:12,863 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-05-05 07:40:12,863 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-05-05 07:40:12,867 [ scc.git] DEBUG ## Unique users: [] 2026-05-05 07:40:12,867 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:40:12,867 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:40:12,870 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-05-05 07:40:12,872 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:40:12,874 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-05-05 07:40:12,889 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-05 07:40:12,892 [ scc.git] DEBUG scripts | 2 +- 2026-05-05 07:40:12,892 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-05 07:40:13,113 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:40:13,113 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-05-05 07:40:13,117 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:40:13,119 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-05-05 07:40:13,190 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-05 07:40:13,193 [ scc.git] DEBUG omero-figure | 2 +- 2026-05-05 07:40:13,193 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-05 07:40:13,545 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:40:13,546 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-05-05 07:40:13,549 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:40:13,551 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Snone: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-05-05 07:40:13,566 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-05 07:40:13,568 [ scc.git] DEBUG omero-iviewer | 2 +- 2026-05-05 07:40:13,568 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-05 07:40:13,976 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:40:13,977 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-05 07:40:14,045 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-05-05 07:40:14,115 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-05-05 07:40:14,129 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-05-05 07:40:14,129 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:40:14,129 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:40:14,132 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-05 07:40:14,921 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7f10ade0ca10> has no local changes 2026-05-05 07:40:14,922 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Snone Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Generated by OMERO-plugins-push#134 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/)' 2026-05-05 07:40:14,996 [ scc.git] DEBUG [detached HEAD 267fd83] merge master -Dorg -Snone 2026-05-05 07:40:14,996 [ scc.merge] INFO Repository: ome/omero-plugins 2026-05-05 07:40:14,996 [ scc.merge] INFO Already up to date. 2026-05-05 07:40:14,996 [ scc.merge] INFO 2026-05-05 07:40:14,996 [ scc.merge] INFO Merged PRs: 2026-05-05 07:40:14,996 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-05-05 07:40:14,996 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-05-05 07:40:14,996 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-05-05 07:40:14,996 [ scc.merge] INFO 2026-05-05 07:40:14,996 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-05-05 07:40:14,996 [ scc.git] DEBUG Calling 'git remote' Synchronizing submodule url for 'minimal-omero-client' Synchronizing submodule url for 'omero-cli-duplicate' Synchronizing submodule url for 'omero-cli-render' Synchronizing submodule url for 'omero-cli-zarr' Synchronizing submodule url for 'omero-figure' Synchronizing submodule url for 'omero-fpbioimage' Synchronizing submodule url for 'omero-gallery' Synchronizing submodule url for 'omero-iviewer' Synchronizing submodule url for 'omero-mapr' Synchronizing submodule url for 'omero-metadata' Synchronizing submodule url for 'omero-parade' Synchronizing submodule url for 'omero-prometheus-tools' Synchronizing submodule url for 'omero-rois' Synchronizing submodule url for 'omero-signup' Synchronizing submodule url for 'omero-test-infra' Synchronizing submodule url for 'omero-upload' Synchronizing submodule url for 'omero-virtual-microscope' Synchronizing submodule url for 'omero-web-zarr' Synchronizing submodule url for 'omero-weberror' Synchronizing submodule url for 'omero-webtest' Synchronizing submodule url for 'rOMERO-gateway' Synchronizing submodule url for 'scripts' Submodule path 'omero-cli-render': checked out '68b73035cf2ab21ddd92022b80bda0966547b3c8' Submodule path 'omero-cli-zarr': checked out '9f844b877d8e19e42a69d7ba43f7dc086680fbec' Submodule path 'omero-figure': checked out 'f94afbb294ba0059081d5015befc12f25522d3c2' From https://github.com/ome/omero-iviewer 16c5892..02bc855 master -> origin/master Submodule path 'omero-iviewer': checked out '02bc85583dedcab239e08d1f2b8dc2b41bbc835f' Submodule path 'omero-metadata': checked out '55060a256e99567f21e64ff3c225d933fba1c501' Submodule path 'omero-rois': checked out 'fc9ff96901ce7b92e3ba51327ba7ba64fff76959' Submodule path 'omero-test-infra': checked out 'c8a0015b0ce72ee0a49e6968af33de10ea00bc77' Submodule path 'omero-virtual-microscope': checked out '160d894dfb61e69618903425b340c7888f3a934f' Submodule path 'omero-web-zarr': checked out '4e1e685dff22136abfd2626f6fd6eaf985aba368' Submodule path 'scripts': checked out '5b4d76862a7141257c9ff221ff7f009f7ec416c0' Merge all submodules using repository configuration: base-branch: master submodules: scripts: base-branch: develop omero-web-zarr: base-branch: main 2026-05-05 07:40:25,235 [ scc.config] DEBUG Found github.token 2026-05-05 07:40:25,237 [urllib3.conn] DEBUG Starting new HTTPS connection (1): api.github.com:443 2026-05-05 07:40:25,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:40:25,916 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:40:26,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /rate_limit HTTP/1.1" 200 None 2026-05-05 07:40:26,311 [ scc.gh] DEBUG 4943 remaining from 5000 (Reset at 08:05 2026-05-05 07:40:26,312 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-05 07:40:26,315 [ scc.git] DEBUG Check current status 2026-05-05 07:40:26,315 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-05 07:40:26,317 [ scc.git] DEBUG 267fd83 merge master -Dorg -Snone 2026-05-05 07:40:26,317 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-05 07:40:26,364 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-05-05 07:40:26,367 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-05-05 07:40:26,369 [ scc.git] DEBUG +68b73035cf2ab21ddd92022b80bda0966547b3c8 omero-cli-render (v0.8.1-28-g68b7303) 2026-05-05 07:40:26,372 [ scc.git] DEBUG +9f844b877d8e19e42a69d7ba43f7dc086680fbec omero-cli-zarr (v0.8.0-1-g9f844b8) 2026-05-05 07:40:26,376 [ scc.git] DEBUG +f94afbb294ba0059081d5015befc12f25522d3c2 omero-figure (v8.0.1.rc2) 2026-05-05 07:40:26,379 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-05-05 07:40:26,382 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-05-05 07:40:26,386 [ scc.git] DEBUG +02bc85583dedcab239e08d1f2b8dc2b41bbc835f omero-iviewer (v0.16.0-60-g02bc855) 2026-05-05 07:40:26,389 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-05-05 07:40:26,392 [ scc.git] DEBUG +55060a256e99567f21e64ff3c225d933fba1c501 omero-metadata (v0.13.0-8-g55060a2) 2026-05-05 07:40:26,395 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-05-05 07:40:26,397 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-05-05 07:40:26,400 [ scc.git] DEBUG +fc9ff96901ce7b92e3ba51327ba7ba64fff76959 omero-rois (v0.4.1-1-gfc9ff96) 2026-05-05 07:40:26,403 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-05-05 07:40:26,406 [ scc.git] DEBUG +c8a0015b0ce72ee0a49e6968af33de10ea00bc77 omero-test-infra (v0.6.3-67-gc8a0015) 2026-05-05 07:40:26,408 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-05-05 07:40:26,411 [ scc.git] DEBUG +160d894dfb61e69618903425b340c7888f3a934f omero-virtual-microscope (v1.1.1-12-g160d894) 2026-05-05 07:40:26,413 [ scc.git] DEBUG +4e1e685dff22136abfd2626f6fd6eaf985aba368 omero-web-zarr (v0.1.1-13-g4e1e685) 2026-05-05 07:40:26,416 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-05-05 07:40:26,418 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-05-05 07:40:26,421 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-05-05 07:40:26,425 [ scc.git] DEBUG +5b4d76862a7141257c9ff221ff7f009f7ec416c0 scripts (v5.10.0-1-g5b4d768) 2026-05-05 07:40:26,427 [ scc.config] DEBUG Found remote.origin.url 2026-05-05 07:40:26,428 [ scc.git] DEBUG Reading repository configuration from repositories.yml 2026-05-05 07:40:26,429 [ scc.git] DEBUG Repository configuration: base-branch: master submodules: omero-web-zarr: base-branch: main scripts: base-branch: develop 2026-05-05 07:40:26,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins HTTP/1.1" 200 None 2026-05-05 07:40:27,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-05 07:40:27,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-05 07:40:28,351 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-05 07:40:28,812 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-05 07:40:28,814 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:40:28,884 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-05-05 07:40:28,884 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-05 07:40:28,886 [ scc.git] DEBUG Check current status 2026-05-05 07:40:28,886 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-05 07:40:28,889 [ scc.git] DEBUG ca8c2ea Merge pull request #67 from jburel/gateway_5_10_0 2026-05-05 07:40:28,889 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-05 07:40:28,926 [ scc.config] DEBUG Found remote.origin.url 2026-05-05 07:40:29,371 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client HTTP/1.1" 200 None 2026-05-05 07:40:29,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-05 07:40:30,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-05 07:40:30,836 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-05 07:40:31,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-05 07:40:31,312 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:40:31,350 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:40:31,351 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-05-05 07:40:31,351 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-05 07:40:31,353 [ scc.git] DEBUG Check current status 2026-05-05 07:40:31,353 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-05 07:40:31,355 [ scc.git] DEBUG 4777ef8 Merge pull request #27 from jburel/build 2026-05-05 07:40:31,355 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-05 07:40:31,394 [ scc.config] DEBUG Found remote.origin.url 2026-05-05 07:40:31,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate HTTP/1.1" 200 None 2026-05-05 07:40:32,341 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-05 07:40:32,826 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-05 07:40:33,294 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-05 07:40:33,762 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-05 07:40:33,763 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:40:33,802 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:40:33,802 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-05-05 07:40:33,802 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-05 07:40:33,804 [ scc.git] DEBUG Check current status 2026-05-05 07:40:33,804 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-05 07:40:33,807 [ scc.git] DEBUG 68b7303 Merge pull request #74 from jburel/changelog2ghrelease 2026-05-05 07:40:33,807 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-05 07:40:33,847 [ scc.config] DEBUG Found remote.origin.url 2026-05-05 07:40:34,299 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render HTTP/1.1" 200 None 2026-05-05 07:40:34,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-05 07:40:35,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-05 07:40:35,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-05 07:40:36,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-05 07:40:36,257 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:40:36,295 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:40:36,296 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-05-05 07:40:36,296 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-05 07:40:36,298 [ scc.git] DEBUG Check current status 2026-05-05 07:40:36,298 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-05 07:40:36,300 [ scc.git] DEBUG 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-05-05 07:40:36,301 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-05 07:40:36,340 [ scc.config] DEBUG Found remote.origin.url 2026-05-05 07:40:36,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr HTTP/1.1" 200 None 2026-05-05 07:40:37,459 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-05 07:40:37,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-05 07:40:38,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-05 07:40:38,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-05 07:40:38,866 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:40:38,905 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:40:38,906 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-05-05 07:40:38,906 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-05 07:40:38,908 [ scc.git] DEBUG Check current status 2026-05-05 07:40:38,908 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-05 07:40:38,911 [ scc.git] DEBUG f94afbb2 Bump version: 8.0.1.rc1 → 8.0.1.rc2 2026-05-05 07:40:38,911 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-05 07:40:38,951 [ scc.config] DEBUG Found remote.origin.url 2026-05-05 07:40:39,424 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure HTTP/1.1" 200 None 2026-05-05 07:40:39,974 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-05 07:40:40,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-05 07:40:40,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-05 07:40:41,347 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-05 07:40:41,348 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:40:41,386 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:40:41,387 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-05-05 07:40:41,387 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-05 07:40:41,389 [ scc.git] DEBUG Check current status 2026-05-05 07:40:41,389 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-05 07:40:41,391 [ scc.git] DEBUG 3b6c05a Merge pull request #30 from jburel/build 2026-05-05 07:40:41,391 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-05 07:40:41,429 [ scc.config] DEBUG Found remote.origin.url 2026-05-05 07:40:42,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage HTTP/1.1" 200 None 2026-05-05 07:40:42,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-05 07:40:43,009 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-05 07:40:43,494 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-05 07:40:43,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-05 07:40:43,962 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:40:44,004 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:40:44,005 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-05-05 07:40:44,005 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-05 07:40:44,007 [ scc.git] DEBUG Check current status 2026-05-05 07:40:44,007 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-05 07:40:44,010 [ scc.git] DEBUG 2a621da Merge pull request #112 from jburel/build 2026-05-05 07:40:44,010 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-05 07:40:44,050 [ scc.config] DEBUG Found remote.origin.url 2026-05-05 07:40:44,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery HTTP/1.1" 200 None 2026-05-05 07:40:45,053 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-05 07:40:45,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-05 07:40:46,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-05 07:40:46,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-05 07:40:46,494 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:40:46,534 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:40:46,535 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-05-05 07:40:46,535 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-05 07:40:46,537 [ scc.git] DEBUG Check current status 2026-05-05 07:40:46,537 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-05 07:40:46,539 [ scc.git] DEBUG 02bc855 Merge pull request #525 from ome/dependabot/npm_and_yarn/postcss-8.5.10 2026-05-05 07:40:46,539 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-05 07:40:46,578 [ scc.config] DEBUG Found remote.origin.url 2026-05-05 07:40:47,047 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer HTTP/1.1" 200 None 2026-05-05 07:40:47,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-05 07:40:48,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-05 07:40:48,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-05 07:40:48,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-05 07:40:48,995 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:40:49,033 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:40:49,034 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-05-05 07:40:49,034 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-05 07:40:49,036 [ scc.git] DEBUG Check current status 2026-05-05 07:40:49,036 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-05 07:40:49,038 [ scc.git] DEBUG 0a557da Bump version: 0.5.3 → 0.5.4.dev0 2026-05-05 07:40:49,038 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-05 07:40:49,077 [ scc.config] DEBUG Found remote.origin.url 2026-05-05 07:40:49,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr HTTP/1.1" 200 None 2026-05-05 07:40:50,128 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-05 07:40:50,621 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-05 07:40:51,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-05 07:40:51,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-05 07:40:51,558 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:40:51,598 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:40:51,599 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-05-05 07:40:51,599 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-05 07:40:51,600 [ scc.git] DEBUG Check current status 2026-05-05 07:40:51,601 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-05 07:40:51,603 [ scc.git] DEBUG 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-05-05 07:40:51,603 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-05 07:40:51,642 [ scc.config] DEBUG Found remote.origin.url 2026-05-05 07:40:52,111 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata HTTP/1.1" 200 None 2026-05-05 07:40:52,648 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-05 07:40:53,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-05 07:40:53,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-05 07:40:54,033 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-05 07:40:54,034 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:40:54,072 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:40:54,072 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-05-05 07:40:54,072 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-05 07:40:54,074 [ scc.git] DEBUG Check current status 2026-05-05 07:40:54,074 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-05 07:40:54,076 [ scc.git] DEBUG fb5ae86 Merge pull request #133 from jburel/build 2026-05-05 07:40:54,076 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-05 07:40:54,115 [ scc.config] DEBUG Found remote.origin.url 2026-05-05 07:40:54,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade HTTP/1.1" 200 None 2026-05-05 07:40:55,125 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-05 07:40:55,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-05 07:40:56,051 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-05 07:40:56,502 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-05 07:40:56,503 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:40:56,541 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:40:56,541 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-05-05 07:40:56,541 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-05 07:40:56,543 [ scc.git] DEBUG Check current status 2026-05-05 07:40:56,543 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-05 07:40:56,545 [ scc.git] DEBUG eb47378 Merge pull request #15 from jburel/build 2026-05-05 07:40:56,545 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-05 07:40:56,584 [ scc.config] DEBUG Found remote.origin.url 2026-05-05 07:40:57,037 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools HTTP/1.1" 200 None 2026-05-05 07:40:57,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-05 07:40:58,023 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-05 07:40:58,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-05 07:40:58,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-05 07:40:58,935 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:40:58,974 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:40:58,975 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-05-05 07:40:58,975 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-05 07:40:58,977 [ scc.git] DEBUG Check current status 2026-05-05 07:40:58,977 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-05 07:40:58,979 [ scc.git] DEBUG fc9ff96 Bump version: 0.4.1 → 0.4.2.dev0 2026-05-05 07:40:58,979 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-05 07:40:59,017 [ scc.config] DEBUG Found remote.origin.url 2026-05-05 07:40:59,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois HTTP/1.1" 200 None 2026-05-05 07:41:00,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-05 07:41:00,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-05 07:41:01,213 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-05 07:41:01,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-05 07:41:01,704 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:41:01,743 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:41:01,743 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-05-05 07:41:01,743 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-05 07:41:01,745 [ scc.git] DEBUG Check current status 2026-05-05 07:41:01,746 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-05 07:41:01,748 [ scc.git] DEBUG be76813 Merge pull request #21 from jburel/build 2026-05-05 07:41:01,748 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-05 07:41:01,786 [ scc.config] DEBUG Found remote.origin.url 2026-05-05 07:41:02,222 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup HTTP/1.1" 200 None 2026-05-05 07:41:02,760 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-05 07:41:03,237 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-05 07:41:03,707 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-05 07:41:04,190 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-05 07:41:04,191 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:41:04,230 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:41:04,231 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-05-05 07:41:04,231 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-05 07:41:04,233 [ scc.git] DEBUG Check current status 2026-05-05 07:41:04,233 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-05 07:41:04,235 [ scc.git] DEBUG c8a0015 Merge pull request #84 from joshmoore/fix-port-readme 2026-05-05 07:41:04,235 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-05 07:41:04,273 [ scc.config] DEBUG Found remote.origin.url 2026-05-05 07:41:04,602 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-test-infra HTTP/1.1" 301 198 Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-05-05 07:41:04,604 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-05-05 07:41:04,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/111908919 HTTP/1.1" 200 None 2026-05-05 07:41:05,433 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-05 07:41:05,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-05 07:41:06,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-05 07:41:06,839 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-05 07:41:06,840 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:41:06,878 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:41:06,878 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-05-05 07:41:06,878 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-05 07:41:06,880 [ scc.git] DEBUG Check current status 2026-05-05 07:41:06,880 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-05 07:41:06,882 [ scc.git] DEBUG 100f6ae Merge pull request #13 from jburel/build 2026-05-05 07:41:06,883 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-05 07:41:06,922 [ scc.config] DEBUG Found remote.origin.url 2026-05-05 07:41:07,368 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload HTTP/1.1" 200 None 2026-05-05 07:41:07,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-05 07:41:08,376 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-05 07:41:08,843 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-05 07:41:09,306 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-05 07:41:09,307 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:41:09,346 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:41:09,347 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-05-05 07:41:09,347 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-05 07:41:09,349 [ scc.git] DEBUG Check current status 2026-05-05 07:41:09,349 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-05 07:41:09,351 [ scc.git] DEBUG 160d894 Fix display of code 2026-05-05 07:41:09,351 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-05 07:41:09,389 [ scc.config] DEBUG Found remote.origin.url 2026-05-05 07:41:09,856 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope HTTP/1.1" 200 None 2026-05-05 07:41:10,365 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-05 07:41:10,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-05 07:41:11,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-05 07:41:11,933 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-05 07:41:11,934 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:41:11,972 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:41:11,972 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-05-05 07:41:11,972 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-05 07:41:11,974 [ scc.git] DEBUG Check current status 2026-05-05 07:41:11,974 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-05 07:41:11,976 [ scc.git] DEBUG 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-05-05 07:41:11,977 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-05 07:41:12,014 [ scc.config] DEBUG Found remote.origin.url 2026-05-05 07:41:12,014 [ scc.git] DEBUG Repository configuration: base-branch: main 2026-05-05 07:41:12,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr HTTP/1.1" 200 None 2026-05-05 07:41:12,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-05 07:41:13,471 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-05 07:41:13,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-05 07:41:14,405 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-05 07:41:14,406 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:41:14,443 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:41:14,443 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-05-05 07:41:14,444 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-05 07:41:14,445 [ scc.git] DEBUG Check current status 2026-05-05 07:41:14,446 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-05 07:41:14,448 [ scc.git] DEBUG 70b01ed Merge pull request #24 from jburel/build 2026-05-05 07:41:14,448 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-05 07:41:14,485 [ scc.config] DEBUG Found remote.origin.url 2026-05-05 07:41:14,837 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-weberror HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-05-05 07:41:14,837 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-05-05 07:41:15,132 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/38373425 HTTP/1.1" 200 None 2026-05-05 07:41:15,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-05 07:41:16,106 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-05 07:41:16,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-05 07:41:17,018 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-05 07:41:17,019 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:41:17,055 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:41:17,056 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-05-05 07:41:17,056 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-05 07:41:17,058 [ scc.git] DEBUG Check current status 2026-05-05 07:41:17,058 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-05 07:41:17,060 [ scc.git] DEBUG 5bfef29 Merge pull request #36 from jburel/build 2026-05-05 07:41:17,060 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-05 07:41:17,099 [ scc.config] DEBUG Found remote.origin.url 2026-05-05 07:41:17,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/openmicroscopy/omero-webtest HTTP/1.1" 301 197 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-05-05 07:41:17,429 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-05-05 07:41:17,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/25970383 HTTP/1.1" 200 None 2026-05-05 07:41:18,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-05 07:41:18,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-05 07:41:19,241 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-05 07:41:19,703 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-05 07:41:19,704 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:41:19,742 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:41:19,742 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-05-05 07:41:19,742 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-05 07:41:19,744 [ scc.git] DEBUG Check current status 2026-05-05 07:41:19,745 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-05 07:41:19,747 [ scc.git] DEBUG 7b5d64d Merge pull request #106 from dominikl/add_examples_2 2026-05-05 07:41:19,747 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-05 07:41:19,786 [ scc.config] DEBUG Found remote.origin.url 2026-05-05 07:41:20,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway HTTP/1.1" 200 None 2026-05-05 07:41:20,764 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-05 07:41:21,234 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-05 07:41:21,692 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-05 07:41:22,168 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-05 07:41:22,169 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:41:22,207 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:41:22,208 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-05-05 07:41:22,208 [ scc.git] DEBUG Calling 'git rev-parse --show-toplevel' 2026-05-05 07:41:22,210 [ scc.git] DEBUG Check current status 2026-05-05 07:41:22,210 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-05 07:41:22,212 [ scc.git] DEBUG 5b4d768 Bump version: 5.10.0 → 5.10.1.dev0 2026-05-05 07:41:22,212 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-05 07:41:22,251 [ scc.config] DEBUG Found remote.origin.url 2026-05-05 07:41:22,252 [ scc.git] DEBUG Repository configuration: base-branch: develop 2026-05-05 07:41:22,587 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/scripts HTTP/1.1" 301 196 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-05-05 07:41:22,588 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-05-05 07:41:22,883 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/4865545 HTTP/1.1" 200 None 2026-05-05 07:41:23,438 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome HTTP/1.1" 200 None 2026-05-05 07:41:23,908 [urllib3.conn] DEBUG https://api.github.com:443 "GET /orgs/ome/members HTTP/1.1" 200 None 2026-05-05 07:41:24,374 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=2 HTTP/1.1" 200 None 2026-05-05 07:41:24,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /organizations/1831717/members?page=3 HTTP/1.1" 200 None 2026-05-05 07:41:24,843 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:41:24,880 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:41:24,880 [ scc.git] DEBUG Resetting... 2026-05-05 07:41:24,880 [ scc.git] DEBUG Calling 'git reset --hard HEAD' 2026-05-05 07:41:24,887 [ scc.git] DEBUG HEAD is now at 267fd83 merge master -Dorg -Snone 2026-05-05 07:41:24,888 [ scc.git] DEBUG Calling 'git submodule update --recursive' 2026-05-05 07:41:24,938 [ scc.git] DEBUG Submodule path 'omero-cli-render': checked out 'ce6e13cfea3157cab0d00fde40f6cc8158946264' 2026-05-05 07:41:24,955 [ scc.git] DEBUG Submodule path 'omero-cli-zarr': checked out '11d35873542022d9638ede115d0dfab4652f8e62' 2026-05-05 07:41:25,004 [ scc.git] DEBUG Submodule path 'omero-figure': checked out '9cc36cde05bde4def7b62b07c2e9ae5f66712e96' 2026-05-05 07:41:25,037 [ scc.git] DEBUG Submodule path 'omero-iviewer': checked out '7a798ceeb3926d049d73788555fb63269a071052' 2026-05-05 07:41:25,051 [ scc.git] DEBUG Submodule path 'omero-metadata': checked out '3cd120cf6f10f71421a4db91fa87baba865c7997' 2026-05-05 07:41:25,069 [ scc.git] DEBUG Submodule path 'omero-rois': checked out 'bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9' 2026-05-05 07:41:25,083 [ scc.git] DEBUG Submodule path 'omero-test-infra': checked out 'cda3ec65052d6933052c8683d080677c6c33dc73' 2026-05-05 07:41:25,097 [ scc.git] DEBUG Submodule path 'omero-virtual-microscope': checked out 'deab81790f403bef598915b89b5300258b44a743' 2026-05-05 07:41:25,108 [ scc.git] DEBUG Submodule path 'omero-web-zarr': checked out '8f3c31388de8a7c44f18a6f0e20ea41d35fae041' 2026-05-05 07:41:25,133 [ scc.git] DEBUG Submodule path 'scripts': checked out '4b4c755af4ccf8a5e709548d1f8415fab48a4867' 2026-05-05 07:41:25,136 [ scc.git] DEBUG Check current status 2026-05-05 07:41:25,136 [ scc.git] DEBUG Calling 'git log --oneline -n 1 HEAD' 2026-05-05 07:41:25,138 [ scc.git] DEBUG 267fd83 merge master -Dorg -Snone 2026-05-05 07:41:25,138 [ scc.git] DEBUG Calling 'git submodule status' 2026-05-05 07:41:25,181 [ scc.git] DEBUG ca8c2ea435592cba45b857cc536815b082c5982b minimal-omero-client (heads/master) 2026-05-05 07:41:25,183 [ scc.git] DEBUG 4777ef8a2eeff2eb06474a89c8ce591e5b1f2a96 omero-cli-duplicate (v0.4.0-20-g4777ef8) 2026-05-05 07:41:25,186 [ scc.git] DEBUG ce6e13cfea3157cab0d00fde40f6cc8158946264 omero-cli-render (v0.8.1-18-gce6e13c) 2026-05-05 07:41:25,189 [ scc.git] DEBUG 11d35873542022d9638ede115d0dfab4652f8e62 omero-cli-zarr (v0.5.5-12-g11d3587) 2026-05-05 07:41:25,194 [ scc.git] DEBUG 9cc36cde05bde4def7b62b07c2e9ae5f66712e96 omero-figure (v7.2.1-3-g9cc36cde) 2026-05-05 07:41:25,196 [ scc.git] DEBUG 3b6c05abc6a7357bf9ef0d7b90ca578d8e327c7a omero-fpbioimage (v0.4.1-8-g3b6c05a) 2026-05-05 07:41:25,199 [ scc.git] DEBUG 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd omero-gallery (v3.4.3-8-g2a621da) 2026-05-05 07:41:25,202 [ scc.git] DEBUG 7a798ceeb3926d049d73788555fb63269a071052 omero-iviewer (v0.16.0-14-g7a798ce) 2026-05-05 07:41:25,205 [ scc.git] DEBUG 0a557da89145e65db313c1721a26cb43e490dd8a omero-mapr (v0.5.3-1-g0a557da) 2026-05-05 07:41:25,208 [ scc.git] DEBUG 3cd120cf6f10f71421a4db91fa87baba865c7997 omero-metadata (v0.13.0-6-g3cd120c) 2026-05-05 07:41:25,210 [ scc.git] DEBUG fb5ae86bde41d34018ff4da10991a34b29e61f4b omero-parade (v0.2.4-14-gfb5ae86) 2026-05-05 07:41:25,213 [ scc.git] DEBUG eb4737837b6d5fe6e807add66c8c43027166deac omero-prometheus-tools (v0.2.3-12-geb47378) 2026-05-05 07:41:25,216 [ scc.git] DEBUG bdfeb5e9212840e8c5fe24ca012f137f6d36a7d9 omero-rois (v0.2.0-76-gbdfeb5e) 2026-05-05 07:41:25,219 [ scc.git] DEBUG be76813540a02082196cac2ffee151e3f68cb71e omero-signup (v0.3.3-7-gbe76813) 2026-05-05 07:41:25,222 [ scc.git] DEBUG cda3ec65052d6933052c8683d080677c6c33dc73 omero-test-infra (v0.6.3-60-gcda3ec6) 2026-05-05 07:41:25,224 [ scc.git] DEBUG 100f6ae42e2c955ffb7cd1e854eb82079476119b omero-upload (v0.4.0-13-g100f6ae) 2026-05-05 07:41:25,227 [ scc.git] DEBUG deab81790f403bef598915b89b5300258b44a743 omero-virtual-microscope (v1.1.1-5-gdeab817) 2026-05-05 07:41:25,229 [ scc.git] DEBUG 8f3c31388de8a7c44f18a6f0e20ea41d35fae041 omero-web-zarr (v0.1.1-8-g8f3c313) 2026-05-05 07:41:25,232 [ scc.git] DEBUG 70b01edc650d59445c1b8508e86c29ab069b2b8f omero-weberror (v0.4.1-9-g70b01ed) 2026-05-05 07:41:25,234 [ scc.git] DEBUG 5bfef29ba742e31ae89cbcb42e328f6a6d2d39dd omero-webtest (v0.4.2-7-g5bfef29) 2026-05-05 07:41:25,237 [ scc.git] DEBUG 7b5d64d3cdf825a6952b40d5b2f550d8d794b0a9 rOMERO-gateway (v0.4.11-14-g7b5d64d) 2026-05-05 07:41:25,240 [ scc.git] DEBUG 4b4c755af4ccf8a5e709548d1f8415fab48a4867 scripts (v5.9.0-1-g4b4c755) 2026-05-05 07:41:25,241 [ scc.merge] INFO Merging Pull Request(s) based on master 2026-05-05 07:41:25,241 [ scc.merge] INFO Including Pull Request(s) opened by any public member of the organization 2026-05-05 07:41:25,241 [ scc.merge] INFO Including Pull Request(s) labelled as include or dependencies 2026-05-05 07:41:25,241 [ scc.merge] INFO Excluding Pull Request(s) staged as draft 2026-05-05 07:41:25,241 [ scc.merge] INFO Excluding Pull Request(s) labelled as exclude or breaking 2026-05-05 07:41:25,241 [ scc.merge] INFO Excluding Pull Request(s) without successful status 2026-05-05 07:41:25,241 [ scc.repo] DEBUG ## PRs found: 2026-05-05 07:41:25,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/pulls HTTP/1.1" 200 None 2026-05-05 07:41:26,176 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/433 HTTP/1.1" 200 None 2026-05-05 07:41:26,177 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-05 07:41:26,842 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74?page=1 HTTP/1.1" 200 None 2026-05-05 07:41:27,363 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:41:27,850 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/6fd5dc72efc90d7f749b332dba3f903414852d74?page=1 HTTP/1.1" 200 None 2026-05-05 07:41:28,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/6fd5dc72efc90d7f749b332dba3f903414852d74?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:41:28,328 [ scc.repo] DEBUG - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-05-05 07:41:28,925 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/432 HTTP/1.1" 200 None 2026-05-05 07:41:28,926 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-05 07:41:29,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51?page=1 HTTP/1.1" 200 None 2026-05-05 07:41:30,209 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:41:30,708 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/25bf90a85a7e0945e652f9d78050c8c4860acb51?page=1 HTTP/1.1" 200 None 2026-05-05 07:41:31,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/25bf90a85a7e0945e652f9d78050c8c4860acb51?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:41:31,184 [ scc.repo] DEBUG - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-05-05 07:41:31,775 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/issues/429 HTTP/1.1" 200 None 2026-05-05 07:41:31,775 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-05 07:41:32,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2?page=1 HTTP/1.1" 200 None 2026-05-05 07:41:32,955 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:41:33,456 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/commits/3062fb487d55aef3602ecee795b63ccb73d1f8e2?page=1 HTTP/1.1" 200 None 2026-05-05 07:41:33,927 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-plugins/statuses/3062fb487d55aef3602ecee795b63ccb73d1f8e2?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:41:33,927 [ scc.repo] DEBUG - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-05-05 07:41:33,928 [ scc.repo] DEBUG ## Branches found: 2026-05-05 07:41:33,928 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:41:33,928 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:41:33,930 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-05 07:41:33,932 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-05 07:41:33,932 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-05 07:41:33,935 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-05 07:41:33,938 [ scc.git] DEBUG Already up to date. 2026-05-05 07:41:33,938 [ scc.git] DEBUG Calling 'git fetch origin pull/429/head' 2026-05-05 07:41:34,260 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-05-05 07:41:34,260 [ scc.git] DEBUG * branch refs/pull/429/head -> FETCH_HEAD 2026-05-05 07:41:34,265 [ scc.git] DEBUG Calling 'git fetch origin pull/432/head' 2026-05-05 07:41:34,584 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-05-05 07:41:34,584 [ scc.git] DEBUG * branch refs/pull/432/head -> FETCH_HEAD 2026-05-05 07:41:34,588 [ scc.git] DEBUG Calling 'git fetch origin pull/433/head' 2026-05-05 07:41:34,900 [ scc.git] DEBUG From https://github.com/ome/omero-plugins 2026-05-05 07:41:34,900 [ scc.git] DEBUG * branch refs/pull/433/head -> FETCH_HEAD 2026-05-05 07:41:34,905 [ scc.git] DEBUG ## Unique users: [] 2026-05-05 07:41:34,905 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:41:34,905 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:41:34,907 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-05-05 07:41:34,909 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:41:34,911 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 429 (Bump scripts from `312afbe` to `4b4c755`) 3062fb487d55aef3602ecee795b63ccb73d1f8e2' 2026-05-05 07:41:34,914 [ scc.git] DEBUG Already up to date. 2026-05-05 07:41:35,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:41:35,101 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-05-05 07:41:35,103 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:41:35,105 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 432 (Bump omero-figure from `fb316a7` to `9cc36cd`) 25bf90a85a7e0945e652f9d78050c8c4860acb51' 2026-05-05 07:41:35,108 [ scc.git] DEBUG Already up to date. 2026-05-05 07:41:35,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:41:35,549 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-05-05 07:41:35,552 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:41:35,554 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 433 (Bump omero-iviewer from `b4102d4` to `7a798ce`) 6fd5dc72efc90d7f749b332dba3f903414852d74' 2026-05-05 07:41:35,556 [ scc.git] DEBUG Already up to date. 2026-05-05 07:41:36,008 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:41:36,008 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-05 07:41:36,058 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:41:36,058 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:41:36,060 [ scc.repo] DEBUG ## PRs found: 2026-05-05 07:41:36,477 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/minimal-omero-client/pulls HTTP/1.1" 200 2 2026-05-05 07:41:36,477 [ scc.repo] DEBUG ## Branches found: 2026-05-05 07:41:36,478 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-05-05 07:41:36,478 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:41:36,478 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:41:36,480 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-05 07:41:36,482 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-05 07:41:36,482 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-05 07:41:36,484 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-05 07:41:36,487 [ scc.git] DEBUG Already up to date. 2026-05-05 07:41:36,487 [ scc.git] DEBUG ## Unique users: [] 2026-05-05 07:41:36,487 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:41:36,487 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:41:36,489 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-05 07:41:36,525 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:41:36,525 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:41:36,527 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:41:36,562 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-05 07:41:36,565 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa3ae75db90> has no local changes 2026-05-05 07:41:36,565 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/minimal-omero-client Already up to date. Generated by OMERO-plugins-push#134 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/)' 2026-05-05 07:41:36,570 [ scc.git] DEBUG [detached HEAD 37e72ae] merge master -Dorg -Ssuccess-only 2026-05-05 07:41:36,570 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:41:36,570 [ scc.repo] DEBUG ## PRs found: 2026-05-05 07:41:37,119 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/pulls HTTP/1.1" 200 None 2026-05-05 07:41:37,888 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/29 HTTP/1.1" 200 None 2026-05-05 07:41:37,889 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-05 07:41:38,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?page=1 HTTP/1.1" 200 None 2026-05-05 07:41:39,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:41:39,665 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-05 07:41:40,165 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/commits/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?page=1 HTTP/1.1" 200 None 2026-05-05 07:41:40,630 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/statuses/ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:41:40,631 [ scc.repo] DEBUG - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-05 07:41:41,356 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18 HTTP/1.1" 200 None 2026-05-05 07:41:41,887 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-duplicate/issues/18/comments HTTP/1.1" 200 None 2026-05-05 07:41:41,888 [ scc.repo] DEBUG ## Branches found: 2026-05-05 07:41:41,888 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-05-05 07:41:41,888 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:41:41,888 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:41:41,891 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-05 07:41:41,893 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-05 07:41:41,893 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-05 07:41:41,895 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-05 07:41:41,898 [ scc.git] DEBUG Already up to date. 2026-05-05 07:41:41,898 [ scc.git] DEBUG Calling 'git fetch origin pull/29/head' 2026-05-05 07:41:42,245 [ scc.git] DEBUG From https://github.com/ome/omero-cli-duplicate 2026-05-05 07:41:42,245 [ scc.git] DEBUG * branch refs/pull/29/head -> FETCH_HEAD 2026-05-05 07:41:42,249 [ scc.git] DEBUG ## Unique users: [] 2026-05-05 07:41:42,249 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:41:42,249 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:41:42,252 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-05-05 07:41:42,254 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:41:42,256 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 29 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) ecc1cff31695b7f097b2174b8cc7c6c45aa6aaf4' 2026-05-05 07:41:42,262 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-05 07:41:42,264 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-05 07:41:42,264 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-05 07:41:42,475 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:41:42,475 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-05 07:41:42,511 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:41:42,511 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:41:42,513 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:41:42,548 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-05 07:41:42,550 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa3ae7ece90> has no local changes 2026-05-05 07:41:42,550 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#134 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/)' 2026-05-05 07:41:42,556 [ scc.git] DEBUG [detached HEAD 27aeb06] merge master -Dorg -Ssuccess-only 2026-05-05 07:41:42,556 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:41:42,557 [ scc.repo] DEBUG ## PRs found: 2026-05-05 07:41:43,102 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls HTTP/1.1" 200 None 2026-05-05 07:41:43,687 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59 HTTP/1.1" 200 None 2026-05-05 07:41:44,185 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/59/comments HTTP/1.1" 200 None 2026-05-05 07:41:44,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?page=1 HTTP/1.1" 200 None 2026-05-05 07:41:45,358 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:41:45,899 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-05 07:41:46,430 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/commits/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?page=1 HTTP/1.1" 200 None 2026-05-05 07:41:46,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/statuses/38c5fff61b004cd2efee36b3f5c034d2b8f01c99?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:41:46,906 [ scc.repo] DEBUG - PR 59 will-moore 'Apply settings to Plate' 2026-05-05 07:41:47,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52 HTTP/1.1" 200 None 2026-05-05 07:41:47,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/issues/52/comments HTTP/1.1" 200 None 2026-05-05 07:41:47,970 [ scc.repo] DEBUG ## Branches found: 2026-05-05 07:41:47,970 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-05-05 07:41:47,970 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:41:47,970 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:41:47,972 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-05 07:41:47,975 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-05 07:41:47,975 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-05 07:41:47,977 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-05 07:41:47,985 [ scc.git] DEBUG Updating ce6e13c..68b7303 2026-05-05 07:41:48,700 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/74 HTTP/1.1" 200 None 2026-05-05 07:41:49,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/75 HTTP/1.1" 200 None 2026-05-05 07:41:50,193 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/71 HTTP/1.1" 200 None 2026-05-05 07:41:50,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-render/pulls/69 HTTP/1.1" 200 None 2026-05-05 07:41:50,949 [ scc.git] DEBUG Calling 'git fetch origin pull/59/head' 2026-05-05 07:41:51,615 [ scc.git] DEBUG From https://github.com/ome/omero-cli-render 2026-05-05 07:41:51,615 [ scc.git] DEBUG * branch refs/pull/59/head -> FETCH_HEAD 2026-05-05 07:41:51,620 [ scc.git] DEBUG ## Unique users: [] 2026-05-05 07:41:51,620 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:41:51,620 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:41:51,622 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-05-05 07:41:51,625 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:41:51,627 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 59 (Apply settings to Plate) 38c5fff61b004cd2efee36b3f5c034d2b8f01c99' 2026-05-05 07:41:51,636 [ scc.git] DEBUG Auto-merging src/omero_cli_render.py 2026-05-05 07:41:51,636 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-05 07:41:51,639 [ scc.git] DEBUG src/omero_cli_render.py | 170 ++++++++++++++++++++++++++++-------------------- 2026-05-05 07:41:51,639 [ scc.git] DEBUG 1 file changed, 101 insertions(+), 69 deletions(-) 2026-05-05 07:41:51,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:41:51,848 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-05 07:41:51,885 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:41:51,885 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:41:51,887 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:41:51,924 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-05 07:41:51,927 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa3ae797290> has no local changes 2026-05-05 07:41:51,927 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Generated by OMERO-plugins-push#134 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/)' 2026-05-05 07:41:51,934 [ scc.git] DEBUG [detached HEAD 59fea6a] merge master -Dorg -Ssuccess-only 2026-05-05 07:41:51,935 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:41:51,935 [ scc.repo] DEBUG ## PRs found: 2026-05-05 07:41:52,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls HTTP/1.1" 200 None 2026-05-05 07:41:53,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/194 HTTP/1.1" 200 None 2026-05-05 07:41:53,651 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b?page=1 HTTP/1.1" 200 None 2026-05-05 07:41:54,214 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:41:54,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/ef80eaa948230c5f2afbce83f2699de62430ca6b/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-05 07:41:55,250 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/193 HTTP/1.1" 200 None 2026-05-05 07:41:55,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None 2026-05-05 07:41:56,437 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:41:56,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-05 07:41:57,472 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None 2026-05-05 07:41:57,936 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?per_page=1 HTTP/1.1" 200 None 2026-05-05 07:41:58,436 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c?page=1 HTTP/1.1" 200 None 2026-05-05 07:41:58,943 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c/status HTTP/1.1" 200 None 2026-05-05 07:41:58,944 [ scc.repo] DEBUG - PR 193 dominikl 'Only parse import uris if stated' 2026-05-05 07:41:59,460 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182 HTTP/1.1" 200 None 2026-05-05 07:41:59,990 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/182/comments HTTP/1.1" 200 None 2026-05-05 07:42:00,562 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None 2026-05-05 07:42:01,207 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:42:02,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-05 07:42:02,492 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None 2026-05-05 07:42:02,985 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?per_page=1 HTTP/1.1" 200 None 2026-05-05 07:42:03,468 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac?page=1 HTTP/1.1" 200 None 2026-05-05 07:42:04,021 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac/status HTTP/1.1" 200 None 2026-05-05 07:42:04,022 [ scc.repo] DEBUG - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-05-05 07:42:04,519 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181 HTTP/1.1" 200 None 2026-05-05 07:42:05,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/181/comments HTTP/1.1" 200 None 2026-05-05 07:42:05,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178 HTTP/1.1" 200 None 2026-05-05 07:42:06,057 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/178/comments HTTP/1.1" 200 None 2026-05-05 07:42:06,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-05-05 07:42:07,188 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:42:07,772 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-05 07:42:08,277 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-05-05 07:42:08,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/f99a6a6869bf6259376adaea157f24955c9aa3ae?per_page=1 HTTP/1.1" 200 None 2026-05-05 07:42:09,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae?page=1 HTTP/1.1" 200 None 2026-05-05 07:42:09,824 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/f99a6a6869bf6259376adaea157f24955c9aa3ae/status HTTP/1.1" 200 None 2026-05-05 07:42:09,824 [ scc.repo] DEBUG - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-05-05 07:42:10,339 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174 HTTP/1.1" 200 None 2026-05-05 07:42:10,866 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/174/comments HTTP/1.1" 200 None 2026-05-05 07:42:11,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-05-05 07:42:11,977 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:42:12,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-05 07:42:13,060 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-05-05 07:42:13,540 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/statuses/e795ce506487fad5c1184c909aaa1dab9a30401c?per_page=1 HTTP/1.1" 200 None 2026-05-05 07:42:14,034 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c?page=1 HTTP/1.1" 200 None 2026-05-05 07:42:14,537 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/commits/e795ce506487fad5c1184c909aaa1dab9a30401c/status HTTP/1.1" 200 None 2026-05-05 07:42:14,538 [ scc.repo] DEBUG - PR 174 will-moore 'Skip wells' 2026-05-05 07:42:15,035 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/170 HTTP/1.1" 200 None 2026-05-05 07:42:15,549 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167 HTTP/1.1" 200 None 2026-05-05 07:42:16,068 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/167/comments HTTP/1.1" 200 None 2026-05-05 07:42:16,558 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/166 HTTP/1.1" 200 None 2026-05-05 07:42:17,087 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/162 HTTP/1.1" 200 None 2026-05-05 07:42:17,601 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123 HTTP/1.1" 200 None 2026-05-05 07:42:18,152 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/issues/123/comments HTTP/1.1" 200 None 2026-05-05 07:42:18,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/256245946/issues/123/comments?page=2 HTTP/1.1" 200 None 2026-05-05 07:42:18,669 [ scc.repo] DEBUG ## Branches found: 2026-05-05 07:42:18,669 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-05-05 07:42:18,669 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:42:18,669 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:42:18,672 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-05 07:42:18,674 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-05 07:42:18,674 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-05 07:42:18,677 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-05 07:42:18,691 [ scc.git] DEBUG Updating 11d3587..9f844b8 2026-05-05 07:42:19,493 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/172 HTTP/1.1" 200 None 2026-05-05 07:42:20,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/192 HTTP/1.1" 200 None 2026-05-05 07:42:20,979 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/186 HTTP/1.1" 200 None 2026-05-05 07:42:21,631 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/187 HTTP/1.1" 200 None 2026-05-05 07:42:22,450 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/180 HTTP/1.1" 200 None 2026-05-05 07:42:23,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/179 HTTP/1.1" 200 None 2026-05-05 07:42:23,961 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/177 HTTP/1.1" 200 None 2026-05-05 07:42:24,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/175 HTTP/1.1" 200 None 2026-05-05 07:42:25,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/147 HTTP/1.1" 200 None 2026-05-05 07:42:26,235 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/173 HTTP/1.1" 200 None 2026-05-05 07:42:27,014 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/171 HTTP/1.1" 200 None 2026-05-05 07:42:27,724 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-cli-zarr/pulls/168 HTTP/1.1" 200 None 2026-05-05 07:42:27,725 [ scc.git] DEBUG Calling 'git fetch origin pull/174/head' 2026-05-05 07:42:28,476 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-05-05 07:42:28,476 [ scc.git] DEBUG * branch refs/pull/174/head -> FETCH_HEAD 2026-05-05 07:42:28,480 [ scc.git] DEBUG Calling 'git fetch origin pull/178/head' 2026-05-05 07:42:29,113 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-05-05 07:42:29,114 [ scc.git] DEBUG * branch refs/pull/178/head -> FETCH_HEAD 2026-05-05 07:42:29,118 [ scc.git] DEBUG Calling 'git fetch origin pull/182/head' 2026-05-05 07:42:29,394 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-05-05 07:42:29,394 [ scc.git] DEBUG * branch refs/pull/182/head -> FETCH_HEAD 2026-05-05 07:42:29,398 [ scc.git] DEBUG Calling 'git fetch origin pull/193/head' 2026-05-05 07:42:29,718 [ scc.git] DEBUG From https://github.com/ome/omero-cli-zarr 2026-05-05 07:42:29,718 [ scc.git] DEBUG * branch refs/pull/193/head -> FETCH_HEAD 2026-05-05 07:42:29,722 [ scc.git] DEBUG ## Unique users: [] 2026-05-05 07:42:29,722 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:42:29,722 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:42:29,724 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-05-05 07:42:29,728 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:42:29,730 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 174 (Skip wells) e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-05-05 07:42:30,034 [ scc.git] DEBUG Auto-merging README.rst 2026-05-05 07:42:30,034 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-05-05 07:42:30,034 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/cli.py 2026-05-05 07:42:30,034 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-05-05 07:42:30,034 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-05-05 07:42:30,034 [ scc.git] DEBUG Auto-merging src/omero_zarr/raw_pixels.py 2026-05-05 07:42:30,034 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/raw_pixels.py 2026-05-05 07:42:30,034 [ scc.git] DEBUG Auto-merging src/omero_zarr/util.py 2026-05-05 07:42:30,034 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/util.py 2026-05-05 07:42:30,034 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-05-05 07:42:30,034 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-05-05 07:42:30,034 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-05 07:42:30,035 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-05 07:42:30,038 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-05-05 07:42:30,042 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-05-05 07:42:30,230 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:42:30,230 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec e795ce506487fad5c1184c909aaa1dab9a30401c' 2026-05-05 07:42:30,234 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-05-05 07:42:30,237 [ scc.git] INFO - PR 174 will-moore 'Skip wells' Conflicting PR. Removed from build [OMERO-plugins-push#134](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/raw_pixels.py - src/omero_zarr/masks.py - src/omero_zarr/util.py - src/omero_zarr/cli.py - test/integration/clitest/test_export.py --conflicts 2026-05-05 07:42:30,239 [ scc.config] DEBUG Found github.token 2026-05-05 07:42:30,239 [ scc.git] DEBUG Not adding comment to issue #174, already --conflicts. 2026-05-05 07:42:30,239 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-05-05 07:42:30,243 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:42:30,245 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 178 (Fix export of masks with multi-theC as multi-channel labels) f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-05-05 07:42:30,448 [ scc.git] DEBUG Auto-merging src/omero_zarr/masks.py 2026-05-05 07:42:30,448 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/masks.py 2026-05-05 07:42:30,449 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_export.py 2026-05-05 07:42:30,449 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_export.py 2026-05-05 07:42:30,449 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-05 07:42:30,449 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-05 07:42:30,452 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-05-05 07:42:30,456 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-05-05 07:42:30,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:42:30,660 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec f99a6a6869bf6259376adaea157f24955c9aa3ae' 2026-05-05 07:42:30,664 [ scc.git] DEBUG Calling 'git diff --name-only 9530c10ba9823fcba6b39139987bf4bcd4a60179..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-05-05 07:42:30,667 [ scc.git] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' Conflicting PR. Removed from build [OMERO-plugins-push#134](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/consoleText) for more details. Possible conflicts: - PR #174 will-moore 'Skip wells' - test/integration/clitest/test_export.py - src/omero_zarr/masks.py - Upstream changes - test/integration/clitest/test_export.py - src/omero_zarr/masks.py --conflicts 2026-05-05 07:42:30,669 [ scc.config] DEBUG Found github.token 2026-05-05 07:42:30,669 [ scc.git] DEBUG Not adding comment to issue #178, already --conflicts. 2026-05-05 07:42:30,669 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-05-05 07:42:30,673 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:42:30,675 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 182 (Revert "Remove support for Plate import") cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-05-05 07:42:30,958 [ scc.git] DEBUG Auto-merging src/omero_zarr/cli.py 2026-05-05 07:42:30,958 [ scc.git] DEBUG Auto-merging src/omero_zarr/zarr_import.py 2026-05-05 07:42:30,958 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_zarr/zarr_import.py 2026-05-05 07:42:30,958 [ scc.git] DEBUG Auto-merging test/integration/clitest/test_import.py 2026-05-05 07:42:30,958 [ scc.git] DEBUG CONFLICT (content): Merge conflict in test/integration/clitest/test_import.py 2026-05-05 07:42:30,958 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-05 07:42:30,959 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-05 07:42:30,963 [ scc.git] DEBUG Calling 'git reset --hard 9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-05-05 07:42:30,971 [ scc.git] DEBUG HEAD is now at 9f844b8 Bump version: 0.8.0 → 0.8.1.dev0 2026-05-05 07:42:31,167 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:42:31,168 [ scc.git] DEBUG Calling 'git merge-base 9f844b877d8e19e42a69d7ba43f7dc086680fbec cf8a0f8c42b06a18d190b2e9fd8746bf98c205ac' 2026-05-05 07:42:31,171 [ scc.git] DEBUG Calling 'git diff --name-only 37ea7000309b4f8b87c5122c138fb59b17ecf86b..9f844b877d8e19e42a69d7ba43f7dc086680fbec' 2026-05-05 07:42:31,174 [ scc.git] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' Conflicting PR. Removed from build [OMERO-plugins-push#134](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_zarr/zarr_import.py - test/integration/clitest/test_import.py --conflicts 2026-05-05 07:42:31,176 [ scc.config] DEBUG Found github.token 2026-05-05 07:42:31,176 [ scc.git] DEBUG Not adding comment to issue #182, already --conflicts. 2026-05-05 07:42:31,176 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c' 2026-05-05 07:42:31,180 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:42:31,182 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 193 (Only parse import uris if stated) bc5ed7a716bc6c0bbb06ed22e94f28f55e03920c' 2026-05-05 07:42:31,189 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-05 07:42:31,192 [ scc.git] DEBUG src/omero_zarr/cli.py | 8 ++++++++ 2026-05-05 07:42:31,192 [ scc.git] DEBUG src/omero_zarr/zarr_import.py | 40 +++++++++++++++++++++------------------- 2026-05-05 07:42:31,192 [ scc.git] DEBUG 2 files changed, 29 insertions(+), 19 deletions(-) 2026-05-05 07:42:31,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:42:31,617 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-05 07:42:31,655 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:42:31,655 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:42:31,657 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:42:31,692 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-05 07:42:31,696 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa3aeba7190> has no local changes 2026-05-05 07:42:31,696 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-cli-zarr Excluded PRs: - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure) - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9f844b8 Previously merged: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 193 dominikl 'Only parse import uris if stated' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Generated by OMERO-plugins-push#134 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/)' 2026-05-05 07:42:31,702 [ scc.git] DEBUG [detached HEAD e72f366] merge master -Dorg -Ssuccess-only 2026-05-05 07:42:31,702 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:42:31,702 [ scc.repo] DEBUG ## PRs found: 2026-05-05 07:42:32,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls HTTP/1.1" 200 None 2026-05-05 07:42:32,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/688 HTTP/1.1" 200 None 2026-05-05 07:42:33,344 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7e40411b99a0116e61e6403e45f820d6f6b3e242?page=1 HTTP/1.1" 200 None 2026-05-05 07:42:33,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7e40411b99a0116e61e6403e45f820d6f6b3e242/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:42:34,447 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7e40411b99a0116e61e6403e45f820d6f6b3e242/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-05 07:42:34,942 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/7e40411b99a0116e61e6403e45f820d6f6b3e242?page=1 HTTP/1.1" 200 None 2026-05-05 07:42:35,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/7e40411b99a0116e61e6403e45f820d6f6b3e242?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:42:35,412 [ scc.repo] DEBUG - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' 2026-05-05 07:42:35,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/686 HTTP/1.1" 200 None 2026-05-05 07:42:36,445 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/686/comments HTTP/1.1" 200 None 2026-05-05 07:42:37,006 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/fd09cda763a6c8192985a9d4e045eb3903f04d15?page=1 HTTP/1.1" 200 None 2026-05-05 07:42:37,583 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/fd09cda763a6c8192985a9d4e045eb3903f04d15/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:42:38,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/fd09cda763a6c8192985a9d4e045eb3903f04d15/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-05 07:42:38,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/fd09cda763a6c8192985a9d4e045eb3903f04d15?page=1 HTTP/1.1" 200 None 2026-05-05 07:42:39,112 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/fd09cda763a6c8192985a9d4e045eb3903f04d15?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:42:39,112 [ scc.repo] DEBUG - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' 2026-05-05 07:42:39,640 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/681 HTTP/1.1" 200 None 2026-05-05 07:42:39,641 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-05 07:42:40,260 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6838d4ffce610fded2cb7c41dc4e01ea7d485846?page=1 HTTP/1.1" 200 None 2026-05-05 07:42:40,816 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6838d4ffce610fded2cb7c41dc4e01ea7d485846/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:42:41,422 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6838d4ffce610fded2cb7c41dc4e01ea7d485846/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-05 07:42:41,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/6838d4ffce610fded2cb7c41dc4e01ea7d485846?page=1 HTTP/1.1" 200 None 2026-05-05 07:42:42,423 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/6838d4ffce610fded2cb7c41dc4e01ea7d485846?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:42:42,424 [ scc.repo] DEBUG - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' 2026-05-05 07:42:42,948 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652 HTTP/1.1" 200 None 2026-05-05 07:42:43,462 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/652/comments HTTP/1.1" 200 None 2026-05-05 07:42:43,462 [ scc.repo] DEBUG # ... Include label: include 2026-05-05 07:42:44,189 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234?page=1 HTTP/1.1" 200 None 2026-05-05 07:42:44,743 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:42:45,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-05 07:42:45,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/commits/e4dd3031a6f8b0295d88c5a27d510e2ead252234?page=1 HTTP/1.1" 200 None 2026-05-05 07:42:46,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/statuses/e4dd3031a6f8b0295d88c5a27d510e2ead252234?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:42:46,254 [ scc.repo] DEBUG - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-05-05 07:42:46,782 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641 HTTP/1.1" 200 None 2026-05-05 07:42:47,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/issues/641/comments HTTP/1.1" 200 None 2026-05-05 07:42:47,311 [ scc.repo] DEBUG ## Branches found: 2026-05-05 07:42:47,311 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-05-05 07:42:47,312 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:42:47,312 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:42:47,314 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-05 07:42:47,317 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-05 07:42:47,317 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-05 07:42:47,323 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-05 07:42:47,374 [ scc.git] DEBUG Updating 9cc36cde..f94afbb2 2026-05-05 07:42:48,048 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/685 HTTP/1.1" 200 None 2026-05-05 07:42:48,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/683 HTTP/1.1" 200 None 2026-05-05 07:42:49,465 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/680 HTTP/1.1" 200 None 2026-05-05 07:42:50,239 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/684 HTTP/1.1" 200 None 2026-05-05 07:42:51,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/682 HTTP/1.1" 200 None 2026-05-05 07:42:51,800 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/679 HTTP/1.1" 200 None 2026-05-05 07:42:52,443 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/677 HTTP/1.1" 200 None 2026-05-05 07:42:53,175 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/666 HTTP/1.1" 200 None 2026-05-05 07:42:53,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/676 HTTP/1.1" 200 None 2026-05-05 07:42:54,599 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/669 HTTP/1.1" 200 None 2026-05-05 07:42:55,309 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/662 HTTP/1.1" 200 None 2026-05-05 07:42:56,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/663 HTTP/1.1" 200 None 2026-05-05 07:42:56,713 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/674 HTTP/1.1" 200 None 2026-05-05 07:42:57,387 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/675 HTTP/1.1" 200 None 2026-05-05 07:42:58,056 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/671 HTTP/1.1" 200 None 2026-05-05 07:42:58,853 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/672 HTTP/1.1" 200 None 2026-05-05 07:42:59,634 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/667 HTTP/1.1" 200 None 2026-05-05 07:43:00,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/665 HTTP/1.1" 200 None 2026-05-05 07:43:01,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/656 HTTP/1.1" 200 None 2026-05-05 07:43:01,738 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/670 HTTP/1.1" 200 None 2026-05-05 07:43:02,517 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/664 HTTP/1.1" 200 None 2026-05-05 07:43:03,292 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/654 HTTP/1.1" 200 None 2026-05-05 07:43:04,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/648 HTTP/1.1" 200 None 2026-05-05 07:43:04,909 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/661 HTTP/1.1" 200 None 2026-05-05 07:43:05,638 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/649 HTTP/1.1" 200 None 2026-05-05 07:43:06,366 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/657 HTTP/1.1" 200 None 2026-05-05 07:43:07,183 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/637 HTTP/1.1" 200 None 2026-05-05 07:43:07,984 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/600 HTTP/1.1" 200 None 2026-05-05 07:43:08,644 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/653 HTTP/1.1" 200 None 2026-05-05 07:43:09,373 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/651 HTTP/1.1" 200 None 2026-05-05 07:43:10,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/650 HTTP/1.1" 200 None 2026-05-05 07:43:10,874 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/647 HTTP/1.1" 200 None 2026-05-05 07:43:12,019 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/610 HTTP/1.1" 200 None 2026-05-05 07:43:12,697 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/644 HTTP/1.1" 200 None 2026-05-05 07:43:13,535 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/646 HTTP/1.1" 200 None 2026-05-05 07:43:14,268 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/612 HTTP/1.1" 200 None 2026-05-05 07:43:15,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/630 HTTP/1.1" 200 None 2026-05-05 07:43:15,765 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/616 HTTP/1.1" 200 None 2026-05-05 07:43:16,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/605 HTTP/1.1" 200 None 2026-05-05 07:43:17,318 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/638 HTTP/1.1" 200 None 2026-05-05 07:43:18,013 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/633 HTTP/1.1" 200 None 2026-05-05 07:43:18,754 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/635 HTTP/1.1" 200 None 2026-05-05 07:43:19,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/623 HTTP/1.1" 200 None 2026-05-05 07:43:20,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-figure/pulls/631 HTTP/1.1" 200 None 2026-05-05 07:43:20,311 [ scc.git] DEBUG Calling 'git fetch origin pull/652/head' 2026-05-05 07:43:20,881 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-05-05 07:43:20,881 [ scc.git] DEBUG * branch refs/pull/652/head -> FETCH_HEAD 2026-05-05 07:43:20,885 [ scc.git] DEBUG Calling 'git fetch origin pull/681/head' 2026-05-05 07:43:21,170 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-05-05 07:43:21,170 [ scc.git] DEBUG * branch refs/pull/681/head -> FETCH_HEAD 2026-05-05 07:43:21,174 [ scc.git] DEBUG Calling 'git fetch origin pull/686/head' 2026-05-05 07:43:21,567 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-05-05 07:43:21,567 [ scc.git] DEBUG * branch refs/pull/686/head -> FETCH_HEAD 2026-05-05 07:43:21,571 [ scc.git] DEBUG Calling 'git fetch origin pull/688/head' 2026-05-05 07:43:22,001 [ scc.git] DEBUG From https://github.com/ome/omero-figure 2026-05-05 07:43:22,002 [ scc.git] DEBUG * branch refs/pull/688/head -> FETCH_HEAD 2026-05-05 07:43:22,005 [ scc.git] DEBUG ## Unique users: [] 2026-05-05 07:43:22,006 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:43:22,006 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:43:22,008 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-05-05 07:43:22,018 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:43:22,020 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 652 (Add export option for PNG (72 dpi), fixes #394 ) e4dd3031a6f8b0295d88c5a27d510e2ead252234' 2026-05-05 07:43:22,189 [ scc.git] DEBUG Auto-merging omero_figure/scripts/omero/figure_scripts/Figure_To_Pdf.py 2026-05-05 07:43:22,189 [ scc.git] DEBUG Auto-merging src/index.html 2026-05-05 07:43:22,190 [ scc.git] DEBUG Auto-merging src/js/views/figure_view.js 2026-05-05 07:43:22,190 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-05 07:43:22,196 [ scc.git] DEBUG .../scripts/omero/figure_scripts/Figure_To_Pdf.py | 163 ++++++++++++++++++++- 2026-05-05 07:43:22,196 [ scc.git] DEBUG src/index.html | 11 ++ 2026-05-05 07:43:22,196 [ scc.git] DEBUG src/js/views/figure_view.js | 1 + 2026-05-05 07:43:22,196 [ scc.git] DEBUG 3 files changed, 172 insertions(+), 3 deletions(-) 2026-05-05 07:43:22,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:43:22,378 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6838d4ffce610fded2cb7c41dc4e01ea7d485846' 2026-05-05 07:43:22,432 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:43:22,434 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 681 (Bump dompurify from 3.3.2 to 3.4.0) 6838d4ffce610fded2cb7c41dc4e01ea7d485846' 2026-05-05 07:43:22,477 [ scc.git] DEBUG Auto-merging package.json 2026-05-05 07:43:22,478 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-05 07:43:22,482 [ scc.git] DEBUG package-lock.json | 11 ++++------- 2026-05-05 07:43:22,482 [ scc.git] DEBUG package.json | 2 +- 2026-05-05 07:43:22,482 [ scc.git] DEBUG 2 files changed, 5 insertions(+), 8 deletions(-) 2026-05-05 07:43:22,835 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:43:22,835 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...fd09cda763a6c8192985a9d4e045eb3903f04d15' 2026-05-05 07:43:22,842 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:43:22,844 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 686 (Add note about zarr etc requirement for export script with zarr images) fd09cda763a6c8192985a9d4e045eb3903f04d15' 2026-05-05 07:43:22,873 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-05 07:43:22,876 [ scc.git] DEBUG README.rst | 40 +++++++++++++++++++++------------------- 2026-05-05 07:43:22,876 [ scc.git] DEBUG 1 file changed, 21 insertions(+), 19 deletions(-) 2026-05-05 07:43:23,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:43:23,288 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...7e40411b99a0116e61e6403e45f820d6f6b3e242' 2026-05-05 07:43:23,295 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:43:23,297 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 688 (app handles ?image=1 without needing /new?image=1) 7e40411b99a0116e61e6403e45f820d6f6b3e242' 2026-05-05 07:43:23,312 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-05 07:43:23,316 [ scc.git] DEBUG src/js/main.js | 14 ++++++++------ 2026-05-05 07:43:23,316 [ scc.git] DEBUG 1 file changed, 8 insertions(+), 6 deletions(-) 2026-05-05 07:43:23,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:43:23,719 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-05 07:43:23,756 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:43:23,756 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:43:23,758 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:43:23,796 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-05 07:43:23,801 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa3ae70cf90> has no local changes 2026-05-05 07:43:23,801 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-figure Excluded PRs: - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) Updating 9cc36cde..f94afbb2 Previously merged: - PR 685 will-moore 'Fix static files links for release build' - PR 683 will-moore 'Add touch support for clicking on single panel' - PR 680 will-moore 'Use --pre install for export script in README' - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' - PR 666 will-moore 'Standalone app' - PR 676 dependabot[bot] 'Bump picomatch' - PR 669 will-moore 'Standalone python script' - PR 662 will-moore 'Export script handles OME-zarr images' - PR 663 will-moore 'Zarr' - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' - PR 667 Tom-TBT 'Label suggestion interface' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' - PR 664 Nirkan 'Handle many channels ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' Generated by OMERO-plugins-push#134 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/)' 2026-05-05 07:43:23,808 [ scc.git] DEBUG [detached HEAD cc28d943] merge master -Dorg -Ssuccess-only 2026-05-05 07:43:23,808 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:43:23,809 [ scc.repo] DEBUG ## PRs found: 2026-05-05 07:43:24,288 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/pulls HTTP/1.1" 200 None 2026-05-05 07:43:24,833 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/31 HTTP/1.1" 200 None 2026-05-05 07:43:24,833 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-05 07:43:25,495 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?page=1 HTTP/1.1" 200 None 2026-05-05 07:43:26,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:43:26,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-05 07:43:27,172 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?page=1 HTTP/1.1" 200 None 2026-05-05 07:43:27,666 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:43:27,666 [ scc.repo] DEBUG - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-05 07:43:28,195 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18 HTTP/1.1" 200 None 2026-05-05 07:43:28,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/issues/18/comments HTTP/1.1" 200 None 2026-05-05 07:43:29,310 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337?page=1 HTTP/1.1" 200 None 2026-05-05 07:43:29,847 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:43:30,328 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/commits/45aed4d15501fa5a524a8b500af8d426f0f6b337?page=1 HTTP/1.1" 200 None 2026-05-05 07:43:30,809 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-fpbioimage/statuses/45aed4d15501fa5a524a8b500af8d426f0f6b337?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:43:30,809 [ scc.repo] DEBUG - PR 18 jburel 'default size z value' 2026-05-05 07:43:30,809 [ scc.repo] DEBUG ## Branches found: 2026-05-05 07:43:30,809 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-05-05 07:43:30,809 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:43:30,809 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:43:30,812 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-05 07:43:30,814 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-05 07:43:30,814 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-05 07:43:30,816 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-05 07:43:30,819 [ scc.git] DEBUG Already up to date. 2026-05-05 07:43:30,819 [ scc.git] DEBUG Calling 'git fetch origin pull/18/head' 2026-05-05 07:43:31,183 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-05-05 07:43:31,183 [ scc.git] DEBUG * branch refs/pull/18/head -> FETCH_HEAD 2026-05-05 07:43:31,187 [ scc.git] DEBUG Calling 'git fetch origin pull/31/head' 2026-05-05 07:43:31,551 [ scc.git] DEBUG From https://github.com/ome/omero-fpbioimage 2026-05-05 07:43:31,551 [ scc.git] DEBUG * branch refs/pull/31/head -> FETCH_HEAD 2026-05-05 07:43:31,555 [ scc.git] DEBUG ## Unique users: [] 2026-05-05 07:43:31,555 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:43:31,555 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:43:31,557 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-05-05 07:43:31,560 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:43:31,562 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 18 (default size z value) 45aed4d15501fa5a524a8b500af8d426f0f6b337' 2026-05-05 07:43:31,699 [ scc.git] DEBUG Auto-merging omero_fpbioimage/views.py 2026-05-05 07:43:31,700 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-05 07:43:31,702 [ scc.git] DEBUG omero_fpbioimage/views.py | 2 ++ 2026-05-05 07:43:31,703 [ scc.git] DEBUG 1 file changed, 2 insertions(+) 2026-05-05 07:43:31,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:43:31,892 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-05-05 07:43:31,895 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:43:31,897 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 31 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 4b00cd1d5e91886f12f55315cb65fd3ef74ebe3c' 2026-05-05 07:43:31,903 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-05 07:43:31,906 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-05 07:43:31,906 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-05 07:43:32,320 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:43:32,320 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-05 07:43:32,358 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:43:32,359 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:43:32,361 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:43:32,397 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-05 07:43:32,400 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa3ae79d390> has no local changes 2026-05-05 07:43:32,400 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#134 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/)' 2026-05-05 07:43:32,406 [ scc.git] DEBUG [detached HEAD 8d2d317] merge master -Dorg -Ssuccess-only 2026-05-05 07:43:32,406 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:43:32,406 [ scc.repo] DEBUG ## PRs found: 2026-05-05 07:43:32,895 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/pulls HTTP/1.1" 200 None 2026-05-05 07:43:33,499 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119 HTTP/1.1" 200 None 2026-05-05 07:43:34,043 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/119/comments HTTP/1.1" 200 None 2026-05-05 07:43:34,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/119/comments?page=2 HTTP/1.1" 200 None 2026-05-05 07:43:34,558 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-05 07:43:35,261 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062?page=1 HTTP/1.1" 200 None 2026-05-05 07:43:35,778 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:43:36,290 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/00257fc993a12b3f78a45db039e7bf2c8a406062?page=1 HTTP/1.1" 200 None 2026-05-05 07:43:36,759 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/00257fc993a12b3f78a45db039e7bf2c8a406062?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:43:36,759 [ scc.repo] DEBUG - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-05-05 07:43:37,266 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118 HTTP/1.1" 200 None 2026-05-05 07:43:37,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/118/comments HTTP/1.1" 200 None 2026-05-05 07:43:38,345 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repositories/9042541/issues/118/comments?page=2 HTTP/1.1" 200 None 2026-05-05 07:43:38,346 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-05 07:43:38,994 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d?page=1 HTTP/1.1" 200 None 2026-05-05 07:43:39,498 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:43:40,001 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/2bf34ddacb511c52e473a104fe2a1c00204bae1d?page=1 HTTP/1.1" 200 None 2026-05-05 07:43:40,482 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/2bf34ddacb511c52e473a104fe2a1c00204bae1d?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:43:40,482 [ scc.repo] DEBUG - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-05-05 07:43:40,960 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/117 HTTP/1.1" 200 None 2026-05-05 07:43:40,960 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-05 07:43:41,620 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c?page=1 HTTP/1.1" 200 None 2026-05-05 07:43:42,133 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:43:42,635 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/155d7ddab4f04c4a91bffc5736ba0741003c566c?page=1 HTTP/1.1" 200 None 2026-05-05 07:43:43,097 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/155d7ddab4f04c4a91bffc5736ba0741003c566c?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:43:43,097 [ scc.repo] DEBUG - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-05-05 07:43:43,600 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/116 HTTP/1.1" 200 None 2026-05-05 07:43:43,600 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-05 07:43:44,220 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?page=1 HTTP/1.1" 200 None 2026-05-05 07:43:44,736 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:43:45,247 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?page=1 HTTP/1.1" 200 None 2026-05-05 07:43:45,718 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:43:45,718 [ scc.repo] DEBUG - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-05-05 07:43:46,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115 HTTP/1.1" 200 None 2026-05-05 07:43:46,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/115/comments HTTP/1.1" 200 None 2026-05-05 07:43:46,757 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-05 07:43:47,409 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5?page=1 HTTP/1.1" 200 None 2026-05-05 07:43:47,934 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:43:48,427 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/25020d66a7df4ec3cad5967706bb7d13b1493bb5?page=1 HTTP/1.1" 200 None 2026-05-05 07:43:48,884 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/25020d66a7df4ec3cad5967706bb7d13b1493bb5?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:43:48,885 [ scc.repo] DEBUG - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-05-05 07:43:49,411 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/114 HTTP/1.1" 200 None 2026-05-05 07:43:49,412 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-05 07:43:50,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b?page=1 HTTP/1.1" 200 None 2026-05-05 07:43:50,591 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:43:51,090 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/cf75d259b2882000d6be73bc1c11c99c27aa439b?page=1 HTTP/1.1" 200 None 2026-05-05 07:43:51,550 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/cf75d259b2882000d6be73bc1c11c99c27aa439b?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:43:51,550 [ scc.repo] DEBUG - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-05-05 07:43:52,062 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/issues/113 HTTP/1.1" 200 None 2026-05-05 07:43:52,063 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-05 07:43:52,870 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?page=1 HTTP/1.1" 200 None 2026-05-05 07:43:53,399 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:43:53,931 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/commits/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?page=1 HTTP/1.1" 200 None 2026-05-05 07:43:54,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-gallery/statuses/6a657d7a4e0bbfaa3464e851023f29c63db15d4e?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:43:54,384 [ scc.repo] DEBUG - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-05-05 07:43:54,384 [ scc.repo] DEBUG ## Branches found: 2026-05-05 07:43:54,384 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-05-05 07:43:54,384 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:43:54,384 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:43:54,387 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-05 07:43:54,389 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-05 07:43:54,389 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-05 07:43:54,392 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-05 07:43:54,394 [ scc.git] DEBUG Already up to date. 2026-05-05 07:43:54,394 [ scc.git] DEBUG Calling 'git fetch origin pull/113/head' 2026-05-05 07:43:54,783 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-05-05 07:43:54,784 [ scc.git] DEBUG * branch refs/pull/113/head -> FETCH_HEAD 2026-05-05 07:43:54,788 [ scc.git] DEBUG Calling 'git fetch origin pull/114/head' 2026-05-05 07:43:55,141 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-05-05 07:43:55,141 [ scc.git] DEBUG * branch refs/pull/114/head -> FETCH_HEAD 2026-05-05 07:43:55,144 [ scc.git] DEBUG Calling 'git fetch origin pull/115/head' 2026-05-05 07:43:55,543 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-05-05 07:43:55,543 [ scc.git] DEBUG * branch refs/pull/115/head -> FETCH_HEAD 2026-05-05 07:43:55,547 [ scc.git] DEBUG Calling 'git fetch origin pull/116/head' 2026-05-05 07:43:55,887 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-05-05 07:43:55,887 [ scc.git] DEBUG * branch refs/pull/116/head -> FETCH_HEAD 2026-05-05 07:43:55,891 [ scc.git] DEBUG Calling 'git fetch origin pull/117/head' 2026-05-05 07:43:56,246 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-05-05 07:43:56,246 [ scc.git] DEBUG * branch refs/pull/117/head -> FETCH_HEAD 2026-05-05 07:43:56,250 [ scc.git] DEBUG Calling 'git fetch origin pull/118/head' 2026-05-05 07:43:56,638 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-05-05 07:43:56,638 [ scc.git] DEBUG * branch refs/pull/118/head -> FETCH_HEAD 2026-05-05 07:43:56,642 [ scc.git] DEBUG Calling 'git fetch origin pull/119/head' 2026-05-05 07:43:56,992 [ scc.git] DEBUG From https://github.com/ome/omero-gallery 2026-05-05 07:43:56,992 [ scc.git] DEBUG * branch refs/pull/119/head -> FETCH_HEAD 2026-05-05 07:43:56,996 [ scc.git] DEBUG ## Unique users: [] 2026-05-05 07:43:56,996 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:43:56,997 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:43:56,999 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-05-05 07:43:57,001 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:43:57,003 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 113 (Bump elliptic from 6.5.4 to 6.6.1) 6a657d7a4e0bbfaa3464e851023f29c63db15d4e' 2026-05-05 07:43:57,011 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-05 07:43:57,016 [ scc.git] DEBUG package-lock.json | 12 ++++++------ 2026-05-05 07:43:57,016 [ scc.git] DEBUG 1 file changed, 6 insertions(+), 6 deletions(-) 2026-05-05 07:43:57,223 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:43:57,223 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-05-05 07:43:57,226 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:43:57,228 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) cf75d259b2882000d6be73bc1c11c99c27aa439b' 2026-05-05 07:43:57,243 [ scc.git] DEBUG Auto-merging package-lock.json 2026-05-05 07:43:57,244 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-05 07:43:57,248 [ scc.git] DEBUG package-lock.json | 625 +++--------------------------------------------------- 2026-05-05 07:43:57,248 [ scc.git] DEBUG 1 file changed, 29 insertions(+), 596 deletions(-) 2026-05-05 07:43:57,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:43:57,659 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-05-05 07:43:57,662 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:43:57,664 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 115 (Bump micromatch, webpack-cli and webpack) 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-05-05 07:43:57,723 [ scc.git] DEBUG Auto-merging package-lock.json 2026-05-05 07:43:57,723 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-05-05 07:43:57,724 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-05 07:43:57,724 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-05 07:43:57,726 [ scc.git] DEBUG Calling 'git reset --hard 1db00deebc769d0ca1672e9e9da6e2edba0732c0' 2026-05-05 07:43:57,731 [ scc.git] DEBUG HEAD is now at 1db00de merge master -Dorg -Ssuccess-only: PR 114 (Bump tar and fsevents) 2026-05-05 07:43:58,129 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:43:58,130 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 25020d66a7df4ec3cad5967706bb7d13b1493bb5' 2026-05-05 07:43:58,132 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-05-05 07:43:58,135 [ scc.git] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#134](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json --conflicts 2026-05-05 07:43:58,137 [ scc.config] DEBUG Found github.token 2026-05-05 07:43:58,137 [ scc.git] DEBUG Not adding comment to issue #115, already --conflicts. 2026-05-05 07:43:58,137 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-05-05 07:43:58,139 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:43:58,141 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 116 (Bump browserify-sign from 4.0.4 to 4.2.3) 42a5fb83ce9b8598e3339099a6b4606ef3fd3f1d' 2026-05-05 07:43:58,157 [ scc.git] DEBUG Auto-merging package-lock.json 2026-05-05 07:43:58,158 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-05 07:43:58,163 [ scc.git] DEBUG package-lock.json | 119 +++++++++++++++++++++++++++++++++++++++++++++++++----- 2026-05-05 07:43:58,163 [ scc.git] DEBUG 1 file changed, 108 insertions(+), 11 deletions(-) 2026-05-05 07:43:58,594 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:43:58,594 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-05-05 07:43:58,597 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:43:58,599 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 155d7ddab4f04c4a91bffc5736ba0741003c566c' 2026-05-05 07:43:58,614 [ scc.git] DEBUG Auto-merging package-lock.json 2026-05-05 07:43:58,615 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-05 07:43:58,619 [ scc.git] DEBUG package-lock.json | 6 +++--- 2026-05-05 07:43:58,620 [ scc.git] DEBUG 1 file changed, 3 insertions(+), 3 deletions(-) 2026-05-05 07:43:59,030 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:43:59,030 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-05-05 07:43:59,033 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:43:59,035 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 118 (Bump braces, webpack-cli and webpack) 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-05-05 07:43:59,139 [ scc.git] DEBUG Auto-merging package-lock.json 2026-05-05 07:43:59,139 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-05-05 07:43:59,139 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-05 07:43:59,140 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-05 07:43:59,142 [ scc.git] DEBUG Calling 'git reset --hard b375164158c6a116753cfcb740cb70837090eede' 2026-05-05 07:43:59,147 [ scc.git] DEBUG HEAD is now at b375164 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-05-05 07:43:59,467 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:43:59,467 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 2bf34ddacb511c52e473a104fe2a1c00204bae1d' 2026-05-05 07:43:59,470 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-05-05 07:43:59,472 [ scc.git] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#134](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json --conflicts 2026-05-05 07:43:59,474 [ scc.config] DEBUG Found github.token 2026-05-05 07:43:59,474 [ scc.git] DEBUG Not adding comment to issue #118, already --conflicts. 2026-05-05 07:43:59,474 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-05-05 07:43:59,477 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:43:59,479 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 119 (Bump serialize-javascript and webpack) 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-05-05 07:43:59,498 [ scc.git] DEBUG Auto-merging package-lock.json 2026-05-05 07:43:59,498 [ scc.git] DEBUG CONFLICT (content): Merge conflict in package-lock.json 2026-05-05 07:43:59,498 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-05 07:43:59,498 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-05 07:43:59,501 [ scc.git] DEBUG Calling 'git reset --hard b375164158c6a116753cfcb740cb70837090eede' 2026-05-05 07:43:59,505 [ scc.git] DEBUG HEAD is now at b375164 merge master -Dorg -Ssuccess-only: PR 117 (Bump cross-spawn from 6.0.5 to 6.0.6) 2026-05-05 07:43:59,903 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:43:59,904 [ scc.git] DEBUG Calling 'git merge-base 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd 00257fc993a12b3f78a45db039e7bf2c8a406062' 2026-05-05 07:43:59,906 [ scc.git] DEBUG Calling 'git diff --name-only 2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd..2a621da2c7ae6ec30fae288d6cfe64d90c40f8fd' 2026-05-05 07:43:59,909 [ scc.git] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Conflicting PR. Removed from build [OMERO-plugins-push#134](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/consoleText) for more details. Possible conflicts: - PR #113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - package-lock.json - PR #114 dependabot[bot] 'Bump tar and fsevents' - package-lock.json - PR #115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - package-lock.json - PR #116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - package-lock.json - PR #117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' - package-lock.json - PR #118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - package-lock.json --conflicts 2026-05-05 07:43:59,911 [ scc.config] DEBUG Found github.token 2026-05-05 07:43:59,911 [ scc.git] DEBUG Not adding comment to issue #119, already --conflicts. 2026-05-05 07:43:59,911 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-05 07:43:59,949 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:43:59,949 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:43:59,951 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:43:59,988 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-05 07:43:59,992 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa3ad5e0e10> has no local changes 2026-05-05 07:43:59,992 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Generated by OMERO-plugins-push#134 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/)' 2026-05-05 07:43:59,998 [ scc.git] DEBUG [detached HEAD 3a711be] merge master -Dorg -Ssuccess-only 2026-05-05 07:43:59,999 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:43:59,999 [ scc.repo] DEBUG ## PRs found: 2026-05-05 07:44:00,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls HTTP/1.1" 200 None 2026-05-05 07:44:01,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/526 HTTP/1.1" 200 None 2026-05-05 07:44:01,569 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/6e5d28e8bc65bc4373a9ac904d47a0dfbabca062?page=1 HTTP/1.1" 200 None 2026-05-05 07:44:02,118 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/6e5d28e8bc65bc4373a9ac904d47a0dfbabca062/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:44:02,675 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/6e5d28e8bc65bc4373a9ac904d47a0dfbabca062/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-05 07:44:03,221 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/6e5d28e8bc65bc4373a9ac904d47a0dfbabca062?page=1 HTTP/1.1" 200 None 2026-05-05 07:44:03,699 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/6e5d28e8bc65bc4373a9ac904d47a0dfbabca062?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:44:03,699 [ scc.repo] DEBUG - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' 2026-05-05 07:44:04,233 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/511 HTTP/1.1" 200 None 2026-05-05 07:44:04,740 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/511/comments HTTP/1.1" 200 None 2026-05-05 07:44:05,254 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/508 HTTP/1.1" 200 None 2026-05-05 07:44:05,792 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503 HTTP/1.1" 200 None 2026-05-05 07:44:06,301 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/503/comments HTTP/1.1" 200 None 2026-05-05 07:44:06,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497 HTTP/1.1" 200 None 2026-05-05 07:44:07,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/497/comments HTTP/1.1" 200 None 2026-05-05 07:44:07,844 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471 HTTP/1.1" 200 None 2026-05-05 07:44:08,353 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/471/comments HTTP/1.1" 200 None 2026-05-05 07:44:08,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9?page=1 HTTP/1.1" 200 None 2026-05-05 07:44:09,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:44:09,968 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/448d042a58da05a522531356cc58c1e35b5744d9?page=1 HTTP/1.1" 200 None 2026-05-05 07:44:10,432 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/448d042a58da05a522531356cc58c1e35b5744d9?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:44:10,433 [ scc.repo] DEBUG - PR 471 will-moore 'Z projection disabled tooltip' 2026-05-05 07:44:10,924 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460 HTTP/1.1" 200 None 2026-05-05 07:44:11,417 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/460/comments HTTP/1.1" 200 None 2026-05-05 07:44:12,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30?page=1 HTTP/1.1" 200 None 2026-05-05 07:44:12,530 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:44:13,020 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/dada2c46211e3bf8015cc47464ab2761ef74ca30?page=1 HTTP/1.1" 200 None 2026-05-05 07:44:13,522 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/statuses/dada2c46211e3bf8015cc47464ab2761ef74ca30?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:44:13,523 [ scc.repo] DEBUG - PR 460 will-moore 'Channel min spinner fix' 2026-05-05 07:44:14,036 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227 HTTP/1.1" 200 None 2026-05-05 07:44:14,538 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/issues/227/comments HTTP/1.1" 200 None 2026-05-05 07:44:15,095 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97?page=1 HTTP/1.1" 200 None 2026-05-05 07:44:15,658 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:44:16,202 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/commits/a081a9f2892763bd49a7ad7ba425965150e76f97/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-05 07:44:16,203 [ scc.repo] DEBUG ## Branches found: 2026-05-05 07:44:16,203 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-05-05 07:44:16,203 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:44:16,203 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:44:16,206 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-05 07:44:16,208 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-05 07:44:16,208 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-05 07:44:16,211 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-05 07:44:16,241 [ scc.git] DEBUG Updating 7a798ce..02bc855 2026-05-05 07:44:17,042 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/525 HTTP/1.1" 200 None 2026-05-05 07:44:17,705 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/524 HTTP/1.1" 200 None 2026-05-05 07:44:18,404 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/523 HTTP/1.1" 200 None 2026-05-05 07:44:19,089 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/522 HTTP/1.1" 200 None 2026-05-05 07:44:19,787 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/521 HTTP/1.1" 200 None 2026-05-05 07:44:20,478 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/520 HTTP/1.1" 200 None 2026-05-05 07:44:21,138 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/519 HTTP/1.1" 200 None 2026-05-05 07:44:21,798 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/518 HTTP/1.1" 200 None 2026-05-05 07:44:22,544 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/514 HTTP/1.1" 200 None 2026-05-05 07:44:23,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/513 HTTP/1.1" 200 None 2026-05-05 07:44:23,964 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/512 HTTP/1.1" 200 None 2026-05-05 07:44:24,695 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/465 HTTP/1.1" 200 None 2026-05-05 07:44:25,355 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/517 HTTP/1.1" 200 None 2026-05-05 07:44:26,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/516 HTTP/1.1" 200 None 2026-05-05 07:44:26,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/510 HTTP/1.1" 200 None 2026-05-05 07:44:27,615 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-iviewer/pulls/506 HTTP/1.1" 200 None 2026-05-05 07:44:27,616 [ scc.git] DEBUG Calling 'git fetch origin pull/460/head' 2026-05-05 07:44:28,110 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-05-05 07:44:28,110 [ scc.git] DEBUG * branch refs/pull/460/head -> FETCH_HEAD 2026-05-05 07:44:28,115 [ scc.git] DEBUG Calling 'git fetch origin pull/471/head' 2026-05-05 07:44:28,570 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-05-05 07:44:28,571 [ scc.git] DEBUG * branch refs/pull/471/head -> FETCH_HEAD 2026-05-05 07:44:28,575 [ scc.git] DEBUG Calling 'git fetch origin pull/526/head' 2026-05-05 07:44:29,164 [ scc.git] DEBUG From https://github.com/ome/omero-iviewer 2026-05-05 07:44:29,164 [ scc.git] DEBUG * branch refs/pull/526/head -> FETCH_HEAD 2026-05-05 07:44:29,167 [ scc.git] DEBUG ## Unique users: [] 2026-05-05 07:44:29,167 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:44:29,167 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:44:29,169 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...dada2c46211e3bf8015cc47464ab2761ef74ca30' 2026-05-05 07:44:29,173 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:44:29,175 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 460 (Channel min spinner fix) dada2c46211e3bf8015cc47464ab2761ef74ca30' 2026-05-05 07:44:29,190 [ scc.git] DEBUG Auto-merging src/model/image_info.js 2026-05-05 07:44:29,190 [ scc.git] DEBUG Auto-merging src/settings/channel-range.js 2026-05-05 07:44:29,191 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-05 07:44:29,194 [ scc.git] DEBUG src/model/image_info.js | 7 ++++--- 2026-05-05 07:44:29,194 [ scc.git] DEBUG src/settings/channel-range.js | 4 +++- 2026-05-05 07:44:29,194 [ scc.git] DEBUG 2 files changed, 7 insertions(+), 4 deletions(-) 2026-05-05 07:44:29,383 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:44:29,384 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...448d042a58da05a522531356cc58c1e35b5744d9' 2026-05-05 07:44:29,388 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:44:29,390 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 471 (Z projection disabled tooltip) 448d042a58da05a522531356cc58c1e35b5744d9' 2026-05-05 07:44:29,409 [ scc.git] DEBUG Auto-merging src/controls/dimension-slider.js 2026-05-05 07:44:29,410 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-05 07:44:29,413 [ scc.git] DEBUG src/controls/dimension-slider.html | 2 +- 2026-05-05 07:44:29,413 [ scc.git] DEBUG src/controls/dimension-slider.js | 20 ++++++++++++++++++++ 2026-05-05 07:44:29,413 [ scc.git] DEBUG 2 files changed, 21 insertions(+), 1 deletion(-) 2026-05-05 07:44:29,820 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:44:29,820 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6e5d28e8bc65bc4373a9ac904d47a0dfbabca062' 2026-05-05 07:44:29,825 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:44:29,827 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 526 (Add keyboard handling for Left, Right, Up, Down Arrows to pan) 6e5d28e8bc65bc4373a9ac904d47a0dfbabca062' 2026-05-05 07:44:29,838 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-05 07:44:29,842 [ scc.git] DEBUG src/viewers/ol3-viewer.js | 21 +++++++++++++++++++++ 2026-05-05 07:44:29,842 [ scc.git] DEBUG 1 file changed, 21 insertions(+) 2026-05-05 07:44:30,256 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:44:30,257 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-05 07:44:30,296 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:44:30,296 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:44:30,298 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:44:30,334 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-05 07:44:30,338 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa3ad5cc310> has no local changes 2026-05-05 07:44:30,338 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-iviewer Excluded PRs: - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..02bc855 Previously merged: - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' - PR 513 jburel 'Bump Python version' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 465 will-moore 'Save as Figure' - PR 517 will-moore 'Fix roi link permissions' - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 471 will-moore 'Z projection disabled tooltip' - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' Generated by OMERO-plugins-push#134 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/)' 2026-05-05 07:44:30,344 [ scc.git] DEBUG [detached HEAD b13a80c] merge master -Dorg -Ssuccess-only 2026-05-05 07:44:30,345 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:44:30,345 [ scc.repo] DEBUG ## PRs found: 2026-05-05 07:44:30,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/pulls HTTP/1.1" 200 None 2026-05-05 07:44:31,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95 HTTP/1.1" 200 None 2026-05-05 07:44:31,932 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/95/comments HTTP/1.1" 200 None 2026-05-05 07:44:31,933 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-05 07:44:32,649 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99?page=1 HTTP/1.1" 200 None 2026-05-05 07:44:33,243 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:44:33,818 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-05 07:44:34,317 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/38cc352a088eaedfaa2dd8874c4f200f98f41a99?page=1 HTTP/1.1" 200 None 2026-05-05 07:44:34,790 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/38cc352a088eaedfaa2dd8874c4f200f98f41a99?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:44:34,790 [ scc.repo] DEBUG - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-05 07:44:35,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/94 HTTP/1.1" 200 None 2026-05-05 07:44:35,845 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d?page=1 HTTP/1.1" 200 None 2026-05-05 07:44:36,380 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:44:36,896 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/1896cfebc876f939f8d83bd1cf56b8584ff2921d?page=1 HTTP/1.1" 200 None 2026-05-05 07:44:37,364 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/1896cfebc876f939f8d83bd1cf56b8584ff2921d?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:44:37,364 [ scc.repo] DEBUG - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-05-05 07:44:37,910 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74 HTTP/1.1" 200 None 2026-05-05 07:44:38,529 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/issues/74/comments HTTP/1.1" 200 None 2026-05-05 07:44:39,120 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322?page=1 HTTP/1.1" 200 None 2026-05-05 07:44:39,639 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:44:40,110 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/commits/45ee35acc44a7d119aa20b38b0427efbe5405322?page=1 HTTP/1.1" 200 None 2026-05-05 07:44:40,581 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-mapr/statuses/45ee35acc44a7d119aa20b38b0427efbe5405322?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:44:40,582 [ scc.repo] DEBUG - PR 74 will-moore 'mapr extension of webclient' 2026-05-05 07:44:40,582 [ scc.repo] DEBUG ## Branches found: 2026-05-05 07:44:40,582 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-05-05 07:44:40,582 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:44:40,582 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:44:40,585 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-05 07:44:40,587 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-05 07:44:40,587 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-05 07:44:40,590 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-05 07:44:40,592 [ scc.git] DEBUG Already up to date. 2026-05-05 07:44:40,593 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-05-05 07:44:40,954 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-05-05 07:44:40,954 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-05-05 07:44:40,958 [ scc.git] DEBUG Calling 'git fetch origin pull/94/head' 2026-05-05 07:44:41,291 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-05-05 07:44:41,291 [ scc.git] DEBUG * branch refs/pull/94/head -> FETCH_HEAD 2026-05-05 07:44:41,295 [ scc.git] DEBUG Calling 'git fetch origin pull/95/head' 2026-05-05 07:44:41,643 [ scc.git] DEBUG From https://github.com/ome/omero-mapr 2026-05-05 07:44:41,644 [ scc.git] DEBUG * branch refs/pull/95/head -> FETCH_HEAD 2026-05-05 07:44:41,647 [ scc.git] DEBUG ## Unique users: [] 2026-05-05 07:44:41,648 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:44:41,648 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:44:41,650 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-05-05 07:44:41,653 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:44:41,655 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (mapr extension of webclient) 45ee35acc44a7d119aa20b38b0427efbe5405322' 2026-05-05 07:44:41,662 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-05 07:44:41,665 [ scc.git] DEBUG .../templates/webclient/base/base_container.html | 182 +++++++++++++ 2026-05-05 07:44:41,665 [ scc.git] DEBUG .../data/includes/right_plugin.general.js.html | 290 --------------------- 2026-05-05 07:44:41,665 [ scc.git] DEBUG requirements.txt | 2 +- 2026-05-05 07:44:41,665 [ scc.git] DEBUG 3 files changed, 183 insertions(+), 291 deletions(-) 2026-05-05 07:44:41,666 [ scc.git] DEBUG create mode 100644 omero_mapr/templates/webclient/base/base_container.html 2026-05-05 07:44:41,666 [ scc.git] DEBUG delete mode 100644 omero_mapr/templates/webclient/data/includes/right_plugin.general.js.html 2026-05-05 07:44:41,852 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:44:41,852 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-05-05 07:44:41,855 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:44:41,857 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 1896cfebc876f939f8d83bd1cf56b8584ff2921d' 2026-05-05 07:44:41,865 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-05 07:44:41,868 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-05 07:44:41,868 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-05 07:44:42,296 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:44:42,296 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-05-05 07:44:42,299 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:44:42,302 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 95 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-05-05 07:44:42,363 [ scc.git] DEBUG Auto-merging .github/workflows/publish_pypi.yml 2026-05-05 07:44:42,363 [ scc.git] DEBUG CONFLICT (content): Merge conflict in .github/workflows/publish_pypi.yml 2026-05-05 07:44:42,363 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-05 07:44:42,364 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-05 07:44:42,366 [ scc.git] DEBUG Calling 'git reset --hard 5cc9c9dec7342fc2ce91923b0b5d3f92a1d9e7e4' 2026-05-05 07:44:42,370 [ scc.git] DEBUG HEAD is now at 5cc9c9d merge master -Dorg -Ssuccess-only: PR 94 (Use the release/v1 branch for the PyPA action publishing to PyPI) 2026-05-05 07:44:42,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:44:42,758 [ scc.git] DEBUG Calling 'git merge-base 0a557da89145e65db313c1721a26cb43e490dd8a 38cc352a088eaedfaa2dd8874c4f200f98f41a99' 2026-05-05 07:44:42,760 [ scc.git] DEBUG Calling 'git diff --name-only 0a557da89145e65db313c1721a26cb43e490dd8a..0a557da89145e65db313c1721a26cb43e490dd8a' 2026-05-05 07:44:42,762 [ scc.git] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PR. Removed from build [OMERO-plugins-push#134](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/consoleText) for more details. Possible conflicts: - PR #94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' - .github/workflows/publish_pypi.yml --conflicts 2026-05-05 07:44:42,764 [ scc.config] DEBUG Found github.token 2026-05-05 07:44:42,764 [ scc.git] DEBUG Not adding comment to issue #95, already --conflicts. 2026-05-05 07:44:42,764 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-05 07:44:42,802 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:44:42,802 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:44:42,804 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:44:42,840 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-05 07:44:42,843 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa3ad5c5490> has no local changes 2026-05-05 07:44:42,843 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#134 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/)' 2026-05-05 07:44:42,849 [ scc.git] DEBUG [detached HEAD 19cb932] merge master -Dorg -Ssuccess-only 2026-05-05 07:44:42,849 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:44:42,849 [ scc.repo] DEBUG ## PRs found: 2026-05-05 07:44:43,403 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls HTTP/1.1" 200 None 2026-05-05 07:44:43,920 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92 HTTP/1.1" 200 None 2026-05-05 07:44:44,428 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/92/comments HTTP/1.1" 200 None 2026-05-05 07:44:45,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f?page=1 HTTP/1.1" 200 None 2026-05-05 07:44:45,607 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:44:46,086 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/64d33da6022f537d572d4f69a5cec86377b6e78f?page=1 HTTP/1.1" 200 None 2026-05-05 07:44:46,554 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/64d33da6022f537d572d4f69a5cec86377b6e78f?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:44:46,555 [ scc.repo] DEBUG - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-05-05 07:44:47,092 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64 HTTP/1.1" 200 None 2026-05-05 07:44:47,662 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/64/comments HTTP/1.1" 200 None 2026-05-05 07:44:48,375 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7?page=1 HTTP/1.1" 200 None 2026-05-05 07:44:48,882 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:44:49,419 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/78e55539b68e351ed5ef202854718b49a37729a7?page=1 HTTP/1.1" 200 None 2026-05-05 07:44:49,892 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/78e55539b68e351ed5ef202854718b49a37729a7?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:44:49,893 [ scc.repo] DEBUG - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-05-05 07:44:50,402 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55 HTTP/1.1" 200 None 2026-05-05 07:44:50,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/issues/55/comments HTTP/1.1" 200 None 2026-05-05 07:44:51,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102?page=1 HTTP/1.1" 200 None 2026-05-05 07:44:52,025 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:44:52,521 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/commits/14f0448a90ccd781126a5c9dc267f4d0a6939102?page=1 HTTP/1.1" 200 None 2026-05-05 07:44:52,993 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/statuses/14f0448a90ccd781126a5c9dc267f4d0a6939102?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:44:52,993 [ scc.repo] DEBUG - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-05-05 07:44:52,993 [ scc.repo] DEBUG ## Branches found: 2026-05-05 07:44:52,993 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-05-05 07:44:52,994 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:44:52,994 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:44:52,997 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-05 07:44:52,999 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-05 07:44:52,999 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-05 07:44:53,002 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-05 07:44:53,010 [ scc.git] DEBUG Updating 3cd120c..55060a2 2026-05-05 07:44:53,793 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-metadata/pulls/90 HTTP/1.1" 200 None 2026-05-05 07:44:53,869 [ scc.git] DEBUG Calling 'git fetch origin pull/55/head' 2026-05-05 07:44:54,345 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-05-05 07:44:54,345 [ scc.git] DEBUG * branch refs/pull/55/head -> FETCH_HEAD 2026-05-05 07:44:54,350 [ scc.git] DEBUG Calling 'git fetch origin pull/64/head' 2026-05-05 07:44:54,928 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-05-05 07:44:54,928 [ scc.git] DEBUG * branch refs/pull/64/head -> FETCH_HEAD 2026-05-05 07:44:54,933 [ scc.git] DEBUG Calling 'git fetch origin pull/92/head' 2026-05-05 07:44:55,285 [ scc.git] DEBUG From https://github.com/ome/omero-metadata 2026-05-05 07:44:55,285 [ scc.git] DEBUG * branch refs/pull/92/head -> FETCH_HEAD 2026-05-05 07:44:55,290 [ scc.git] DEBUG ## Unique users: [] 2026-05-05 07:44:55,290 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:44:55,290 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:44:55,293 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-05-05 07:44:55,296 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:44:55,298 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 55 (Prevent users from creating columns with python keyword names) 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-05-05 07:44:55,312 [ scc.git] DEBUG Auto-merging src/omero_metadata/cli.py 2026-05-05 07:44:55,312 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/cli.py 2026-05-05 07:44:55,312 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-05-05 07:44:55,312 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-05-05 07:44:55,312 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-05 07:44:55,313 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-05 07:44:55,315 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-05-05 07:44:55,320 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-05-05 07:44:55,501 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:44:55,501 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 14f0448a90ccd781126a5c9dc267f4d0a6939102' 2026-05-05 07:44:55,506 [ scc.git] DEBUG Calling 'git diff --name-only 27cc7289e9da842ed29a8192419a6b9ef851256d..55060a256e99567f21e64ff3c225d933fba1c501' 2026-05-05 07:44:55,508 [ scc.git] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' Conflicting PR. Removed from build [OMERO-plugins-push#134](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/consoleText) for more details. Possible conflicts: - Upstream changes - src/omero_metadata/populate.py - src/omero_metadata/cli.py --conflicts 2026-05-05 07:44:55,510 [ scc.config] DEBUG Found github.token 2026-05-05 07:44:55,510 [ scc.git] DEBUG Not adding comment to issue #55, already --conflicts. 2026-05-05 07:44:55,510 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...78e55539b68e351ed5ef202854718b49a37729a7' 2026-05-05 07:44:55,514 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:44:55,516 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 64 (Support images_by_name for Screen and Plate) 78e55539b68e351ed5ef202854718b49a37729a7' 2026-05-05 07:44:55,532 [ scc.git] DEBUG Auto-merging src/omero_metadata/populate.py 2026-05-05 07:44:55,532 [ scc.git] DEBUG CONFLICT (content): Merge conflict in src/omero_metadata/populate.py 2026-05-05 07:44:55,532 [ scc.git] DEBUG Auto-merging test/integration/metadata/test_populate.py 2026-05-05 07:44:55,533 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-05 07:44:55,533 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-05 07:44:55,535 [ scc.git] DEBUG Calling 'git reset --hard 55060a256e99567f21e64ff3c225d933fba1c501' 2026-05-05 07:44:55,540 [ scc.git] DEBUG HEAD is now at 55060a2 Merge pull request #90 from will-moore/pypi_release_action 2026-05-05 07:44:55,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:44:55,944 [ scc.git] DEBUG Calling 'git merge-base 55060a256e99567f21e64ff3c225d933fba1c501 78e55539b68e351ed5ef202854718b49a37729a7' 2026-05-05 07:44:55,948 [ scc.git] DEBUG Calling 'git diff --name-only 298f02623cd90268162161a988575db0b8c3d1ab..55060a256e99567f21e64ff3c225d933fba1c501' 2026-05-05 07:44:55,950 [ scc.git] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' Conflicting PR. Removed from build [OMERO-plugins-push#134](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/consoleText) for more details. Possible conflicts: - PR #55 kkoz 'Prevent users from creating columns with python keyword names' - src/omero_metadata/populate.py - Upstream changes - src/omero_metadata/populate.py --conflicts 2026-05-05 07:44:55,952 [ scc.config] DEBUG Found github.token 2026-05-05 07:44:55,952 [ scc.git] DEBUG Not adding comment to issue #64, already --conflicts. 2026-05-05 07:44:55,952 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-05-05 07:44:55,954 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:44:55,956 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 92 (add resolve_rois to projectwrapper) 64d33da6022f537d572d4f69a5cec86377b6e78f' 2026-05-05 07:44:55,966 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-05 07:44:55,969 [ scc.git] DEBUG src/omero_metadata/populate.py | 55 +++++++++++++++++++++++++++++++++++++++++- 2026-05-05 07:44:55,969 [ scc.git] DEBUG 1 file changed, 54 insertions(+), 1 deletion(-) 2026-05-05 07:44:56,381 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:44:56,382 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-05 07:44:56,419 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:44:56,419 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:44:56,421 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:44:56,457 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-05 07:44:56,461 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa3ad5e0f50> has no local changes 2026-05-05 07:44:56,461 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Generated by OMERO-plugins-push#134 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/)' 2026-05-05 07:44:56,467 [ scc.git] DEBUG [detached HEAD 644f3a9] merge master -Dorg -Ssuccess-only 2026-05-05 07:44:56,468 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:44:56,468 [ scc.repo] DEBUG ## PRs found: 2026-05-05 07:44:57,000 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/pulls HTTP/1.1" 200 None 2026-05-05 07:44:57,486 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/142 HTTP/1.1" 200 None 2026-05-05 07:44:58,101 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0?page=1 HTTP/1.1" 200 None 2026-05-05 07:44:58,654 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:44:59,236 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-05 07:44:59,730 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/16e9698187d538ee54a603e8f6c8c95a6ae448e0?page=1 HTTP/1.1" 200 None 2026-05-05 07:45:00,206 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/16e9698187d538ee54a603e8f6c8c95a6ae448e0?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:45:00,206 [ scc.repo] DEBUG - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-05-05 07:45:00,728 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/141 HTTP/1.1" 200 None 2026-05-05 07:45:00,729 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-05 07:45:01,372 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80?page=1 HTTP/1.1" 200 None 2026-05-05 07:45:01,914 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:45:02,416 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/de7db17cd62b498179713df276cff151a1f36d80?page=1 HTTP/1.1" 200 None 2026-05-05 07:45:02,885 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/de7db17cd62b498179713df276cff151a1f36d80?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:45:02,886 [ scc.repo] DEBUG - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-05-05 07:45:03,377 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/140 HTTP/1.1" 200 None 2026-05-05 07:45:03,378 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-05 07:45:04,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0?page=1 HTTP/1.1" 200 None 2026-05-05 07:45:04,566 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:45:05,072 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/commits/6301bc61b0a877104173846d526382bf15cc70a0?page=1 HTTP/1.1" 200 None 2026-05-05 07:45:05,543 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/statuses/6301bc61b0a877104173846d526382bf15cc70a0?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:45:05,544 [ scc.repo] DEBUG - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-05-05 07:45:06,071 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/139 HTTP/1.1" 200 None 2026-05-05 07:45:06,595 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94 HTTP/1.1" 200 None 2026-05-05 07:45:07,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/94/comments HTTP/1.1" 200 None 2026-05-05 07:45:07,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86 HTTP/1.1" 200 None 2026-05-05 07:45:08,159 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/86/comments HTTP/1.1" 200 None 2026-05-05 07:45:08,667 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39 HTTP/1.1" 200 None 2026-05-05 07:45:09,192 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-parade/issues/39/comments HTTP/1.1" 200 None 2026-05-05 07:45:09,194 [ scc.repo] DEBUG ## Branches found: 2026-05-05 07:45:09,194 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-05-05 07:45:09,194 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:45:09,194 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:45:09,197 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-05 07:45:09,200 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-05 07:45:09,200 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-05 07:45:09,203 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-05 07:45:09,205 [ scc.git] DEBUG Already up to date. 2026-05-05 07:45:09,206 [ scc.git] DEBUG Calling 'git fetch origin pull/140/head' 2026-05-05 07:45:09,552 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-05-05 07:45:09,552 [ scc.git] DEBUG * branch refs/pull/140/head -> FETCH_HEAD 2026-05-05 07:45:09,557 [ scc.git] DEBUG Calling 'git fetch origin pull/141/head' 2026-05-05 07:45:09,844 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-05-05 07:45:09,844 [ scc.git] DEBUG * branch refs/pull/141/head -> FETCH_HEAD 2026-05-05 07:45:09,848 [ scc.git] DEBUG Calling 'git fetch origin pull/142/head' 2026-05-05 07:45:10,201 [ scc.git] DEBUG From https://github.com/ome/omero-parade 2026-05-05 07:45:10,201 [ scc.git] DEBUG * branch refs/pull/142/head -> FETCH_HEAD 2026-05-05 07:45:10,206 [ scc.git] DEBUG ## Unique users: [] 2026-05-05 07:45:10,206 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:45:10,206 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:45:10,208 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...6301bc61b0a877104173846d526382bf15cc70a0' 2026-05-05 07:45:10,211 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:45:10,213 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 140 (Bump vite from 4.2.3 to 4.5.9) 6301bc61b0a877104173846d526382bf15cc70a0' 2026-05-05 07:45:10,220 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-05 07:45:10,223 [ scc.git] DEBUG package-lock.json | 289 ++++++++++++++++++++++++++---------------------------- 2026-05-05 07:45:10,223 [ scc.git] DEBUG package.json | 2 +- 2026-05-05 07:45:10,223 [ scc.git] DEBUG 2 files changed, 138 insertions(+), 153 deletions(-) 2026-05-05 07:45:10,574 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:45:10,575 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...de7db17cd62b498179713df276cff151a1f36d80' 2026-05-05 07:45:10,578 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:45:10,580 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 141 (Bump axios from 1.6.0 to 1.8.2) de7db17cd62b498179713df276cff151a1f36d80' 2026-05-05 07:45:10,590 [ scc.git] DEBUG Auto-merging package-lock.json 2026-05-05 07:45:10,590 [ scc.git] DEBUG Auto-merging package.json 2026-05-05 07:45:10,590 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-05 07:45:10,594 [ scc.git] DEBUG package-lock.json | 18 ++++++++++-------- 2026-05-05 07:45:10,594 [ scc.git] DEBUG package.json | 2 +- 2026-05-05 07:45:10,594 [ scc.git] DEBUG 2 files changed, 11 insertions(+), 9 deletions(-) 2026-05-05 07:45:11,010 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:45:11,011 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-05-05 07:45:11,014 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:45:11,017 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 142 (Use the release/v1 branch for the PyPA action publishing to PyPI) 16e9698187d538ee54a603e8f6c8c95a6ae448e0' 2026-05-05 07:45:11,024 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-05 07:45:11,027 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-05 07:45:11,027 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-05 07:45:11,458 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:45:11,459 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-05 07:45:11,498 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:45:11,498 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:45:11,500 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:45:11,537 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-05 07:45:11,540 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa3ad606490> has no local changes 2026-05-05 07:45:11,540 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Generated by OMERO-plugins-push#134 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/)' 2026-05-05 07:45:11,547 [ scc.git] DEBUG [detached HEAD b79a388] merge master -Dorg -Ssuccess-only 2026-05-05 07:45:11,547 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:45:11,547 [ scc.repo] DEBUG ## PRs found: 2026-05-05 07:45:11,995 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/pulls HTTP/1.1" 200 None 2026-05-05 07:45:12,536 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/issues/16 HTTP/1.1" 200 None 2026-05-05 07:45:12,537 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-05 07:45:13,240 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e?page=1 HTTP/1.1" 200 None 2026-05-05 07:45:13,813 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:45:14,390 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-05 07:45:14,906 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/commits/5381b9f25e1666d81d236039a1317276291e9b2e?page=1 HTTP/1.1" 200 None 2026-05-05 07:45:15,398 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-prometheus-tools/statuses/5381b9f25e1666d81d236039a1317276291e9b2e?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:45:15,398 [ scc.repo] DEBUG - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-05 07:45:15,398 [ scc.repo] DEBUG ## Branches found: 2026-05-05 07:45:15,398 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-05-05 07:45:15,398 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:45:15,398 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:45:15,401 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-05 07:45:15,404 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-05 07:45:15,404 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-05 07:45:15,406 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-05 07:45:15,409 [ scc.git] DEBUG Already up to date. 2026-05-05 07:45:15,409 [ scc.git] DEBUG Calling 'git fetch origin pull/16/head' 2026-05-05 07:45:15,774 [ scc.git] DEBUG From https://github.com/ome/omero-prometheus-tools 2026-05-05 07:45:15,774 [ scc.git] DEBUG * branch refs/pull/16/head -> FETCH_HEAD 2026-05-05 07:45:15,779 [ scc.git] DEBUG ## Unique users: [] 2026-05-05 07:45:15,779 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:45:15,779 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:45:15,782 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...5381b9f25e1666d81d236039a1317276291e9b2e' 2026-05-05 07:45:15,784 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:45:15,786 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 16 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 5381b9f25e1666d81d236039a1317276291e9b2e' 2026-05-05 07:45:15,792 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-05 07:45:15,795 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-05 07:45:15,795 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-05 07:45:15,997 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:45:15,997 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-05 07:45:16,035 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:45:16,035 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:45:16,037 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:45:16,076 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-05 07:45:16,079 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa3ad5ff650> has no local changes 2026-05-05 07:45:16,079 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#134 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/)' 2026-05-05 07:45:16,085 [ scc.git] DEBUG [detached HEAD f70beca] merge master -Dorg -Ssuccess-only 2026-05-05 07:45:16,085 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:45:16,085 [ scc.repo] DEBUG ## PRs found: 2026-05-05 07:45:16,557 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls HTTP/1.1" 200 None 2026-05-05 07:45:17,100 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/issues/32 HTTP/1.1" 200 None 2026-05-05 07:45:17,101 [ scc.repo] DEBUG ## Branches found: 2026-05-05 07:45:17,101 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-05-05 07:45:17,101 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:45:17,101 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:45:17,104 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-05 07:45:17,106 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-05 07:45:17,106 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-05 07:45:17,109 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-05 07:45:17,117 [ scc.git] DEBUG Updating bdfeb5e..fc9ff96 2026-05-05 07:45:17,911 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/36 HTTP/1.1" 200 None 2026-05-05 07:45:18,660 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-rois/pulls/35 HTTP/1.1" 200 None 2026-05-05 07:45:18,663 [ scc.git] DEBUG ## Unique users: [] 2026-05-05 07:45:18,663 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:45:18,663 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:45:18,665 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-05 07:45:18,704 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:45:18,704 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:45:18,706 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:45:18,744 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-05 07:45:18,747 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa3ad5def90> has no local changes 2026-05-05 07:45:18,747 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating bdfeb5e..fc9ff96 Previously merged: - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' - PR 35 will-moore 'Add roi to array functions' Generated by OMERO-plugins-push#134 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/)' 2026-05-05 07:45:18,753 [ scc.git] DEBUG [detached HEAD 432864e] merge master -Dorg -Ssuccess-only 2026-05-05 07:45:18,753 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:45:18,753 [ scc.repo] DEBUG ## PRs found: 2026-05-05 07:45:19,329 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/pulls HTTP/1.1" 200 None 2026-05-05 07:45:19,923 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/22 HTTP/1.1" 200 None 2026-05-05 07:45:19,924 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-05 07:45:20,555 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa?page=1 HTTP/1.1" 200 None 2026-05-05 07:45:21,144 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:45:21,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-05 07:45:22,275 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/8b27e47a330555e99e9594f0c4b546946f4f98aa?page=1 HTTP/1.1" 200 None 2026-05-05 07:45:22,756 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/8b27e47a330555e99e9594f0c4b546946f4f98aa?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:45:22,757 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-05 07:45:23,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14 HTTP/1.1" 200 None 2026-05-05 07:45:23,781 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/issues/14/comments HTTP/1.1" 200 None 2026-05-05 07:45:24,408 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?page=1 HTTP/1.1" 200 None 2026-05-05 07:45:24,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:45:25,464 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/commits/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?page=1 HTTP/1.1" 200 None 2026-05-05 07:45:25,930 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-signup/statuses/b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:45:25,931 [ scc.repo] DEBUG - PR 14 manics 'Add pre-commit (black, flake8)' 2026-05-05 07:45:25,931 [ scc.repo] DEBUG ## Branches found: 2026-05-05 07:45:25,931 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-05-05 07:45:25,931 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:45:25,931 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:45:25,934 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-05 07:45:25,936 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-05 07:45:25,936 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-05 07:45:25,938 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-05 07:45:25,941 [ scc.git] DEBUG Already up to date. 2026-05-05 07:45:25,941 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-05-05 07:45:26,432 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-05-05 07:45:26,433 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-05-05 07:45:26,437 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-05-05 07:45:26,784 [ scc.git] DEBUG From https://github.com/ome/omero-signup 2026-05-05 07:45:26,784 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-05-05 07:45:26,788 [ scc.git] DEBUG ## Unique users: [] 2026-05-05 07:45:26,788 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:45:26,788 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:45:26,791 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-05-05 07:45:26,794 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:45:26,796 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Add pre-commit (black, flake8)) b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-05-05 07:45:26,862 [ scc.git] DEBUG Auto-merging omero_signup/signup_settings.py 2026-05-05 07:45:26,863 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/signup_settings.py 2026-05-05 07:45:26,863 [ scc.git] DEBUG Auto-merging omero_signup/urls.py 2026-05-05 07:45:26,863 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/urls.py 2026-05-05 07:45:26,863 [ scc.git] DEBUG Auto-merging omero_signup/views.py 2026-05-05 07:45:26,863 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_signup/views.py 2026-05-05 07:45:26,863 [ scc.git] DEBUG Auto-merging setup.py 2026-05-05 07:45:26,863 [ scc.git] DEBUG CONFLICT (content): Merge conflict in setup.py 2026-05-05 07:45:26,863 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-05 07:45:26,863 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-05 07:45:26,866 [ scc.git] DEBUG Calling 'git reset --hard be76813540a02082196cac2ffee151e3f68cb71e' 2026-05-05 07:45:26,870 [ scc.git] DEBUG HEAD is now at be76813 Merge pull request #21 from jburel/build 2026-05-05 07:45:27,052 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:45:27,053 [ scc.git] DEBUG Calling 'git merge-base be76813540a02082196cac2ffee151e3f68cb71e b6aaf8b1b1af424ed458b3fe51d67ed0838d9e2d' 2026-05-05 07:45:27,056 [ scc.git] DEBUG Calling 'git diff --name-only f7ab15963cb5284a255b8574c8675437644fbdf1..be76813540a02082196cac2ffee151e3f68cb71e' 2026-05-05 07:45:27,059 [ scc.git] INFO - PR 14 manics 'Add pre-commit (black, flake8)' Conflicting PR. Removed from build [OMERO-plugins-push#134](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/consoleText) for more details. Possible conflicts: - Upstream changes - omero_signup/views.py - setup.py - omero_signup/signup_settings.py - omero_signup/urls.py --conflicts 2026-05-05 07:45:27,061 [ scc.config] DEBUG Found github.token 2026-05-05 07:45:27,061 [ scc.git] DEBUG Not adding comment to issue #14, already --conflicts. 2026-05-05 07:45:27,061 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-05-05 07:45:27,063 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:45:27,065 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8b27e47a330555e99e9594f0c4b546946f4f98aa' 2026-05-05 07:45:27,072 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-05 07:45:27,075 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-05 07:45:27,075 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-05 07:45:27,490 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:45:27,491 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-05 07:45:27,528 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:45:27,528 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:45:27,530 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:45:27,567 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-05 07:45:27,570 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa3ad601750> has no local changes 2026-05-05 07:45:27,570 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Generated by OMERO-plugins-push#134 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/)' 2026-05-05 07:45:27,576 [ scc.git] DEBUG [detached HEAD 33205f0] merge master -Dorg -Ssuccess-only 2026-05-05 07:45:27,576 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:45:27,576 [ scc.repo] DEBUG ## PRs found: 2026-05-05 07:45:28,079 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls HTTP/1.1" 200 None 2026-05-05 07:45:28,628 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/75 HTTP/1.1" 200 None 2026-05-05 07:45:29,114 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74 HTTP/1.1" 200 None 2026-05-05 07:45:29,619 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/issues/74/comments HTTP/1.1" 200 None 2026-05-05 07:45:30,226 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623?page=1 HTTP/1.1" 200 None 2026-05-05 07:45:30,758 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:45:31,264 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/commits/c18c080227e97899382d3464baa7c7885a621623?page=1 HTTP/1.1" 200 None 2026-05-05 07:45:31,729 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/statuses/c18c080227e97899382d3464baa7c7885a621623?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:45:31,729 [ scc.repo] DEBUG - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-05-05 07:45:31,730 [ scc.repo] DEBUG ## Branches found: 2026-05-05 07:45:31,730 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-05-05 07:45:31,730 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:45:31,730 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:45:31,733 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-05 07:45:31,735 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-05 07:45:31,735 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-05 07:45:31,738 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-05 07:45:31,745 [ scc.git] DEBUG Updating cda3ec6..c8a0015 2026-05-05 07:45:32,441 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/84 HTTP/1.1" 200 None 2026-05-05 07:45:33,131 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/82 HTTP/1.1" 200 None 2026-05-05 07:45:33,880 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-test-infra/pulls/81 HTTP/1.1" 200 None 2026-05-05 07:45:33,881 [ scc.git] DEBUG Calling 'git fetch origin pull/74/head' 2026-05-05 07:45:34,296 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-test-infra 2026-05-05 07:45:34,296 [ scc.git] DEBUG * branch refs/pull/74/head -> FETCH_HEAD 2026-05-05 07:45:34,301 [ scc.git] DEBUG ## Unique users: [] 2026-05-05 07:45:34,302 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:45:34,302 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:45:34,304 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c18c080227e97899382d3464baa7c7885a621623' 2026-05-05 07:45:34,307 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:45:34,309 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 74 (Add 'ms' target for ./docker) c18c080227e97899382d3464baa7c7885a621623' 2026-05-05 07:45:34,317 [ scc.git] DEBUG Auto-merging .github/workflows/main.yml 2026-05-05 07:45:34,318 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-05 07:45:34,321 [ scc.git] DEBUG .github/workflows/main.yml | 8 ++++++++ 2026-05-05 07:45:34,321 [ scc.git] DEBUG docker | 22 ++++++++++++++++++++++ 2026-05-05 07:45:34,321 [ scc.git] DEBUG ms/compose.yml | 11 +++++++++++ 2026-05-05 07:45:34,321 [ scc.git] DEBUG ms/example/Dockerfile | 13 +++++++++++++ 2026-05-05 07:45:34,321 [ scc.git] DEBUG ms/test | 2 ++ 2026-05-05 07:45:34,321 [ scc.git] DEBUG 5 files changed, 56 insertions(+) 2026-05-05 07:45:34,321 [ scc.git] DEBUG create mode 100644 ms/compose.yml 2026-05-05 07:45:34,322 [ scc.git] DEBUG create mode 100644 ms/example/Dockerfile 2026-05-05 07:45:34,322 [ scc.git] DEBUG create mode 100755 ms/test 2026-05-05 07:45:34,514 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:45:34,515 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-05 07:45:34,554 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:45:34,554 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:45:34,556 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:45:34,592 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-05 07:45:34,596 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa3ad61b3d0> has no local changes 2026-05-05 07:45:34,596 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Generated by OMERO-plugins-push#134 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/)' 2026-05-05 07:45:34,602 [ scc.git] DEBUG [detached HEAD 91007d3] merge master -Dorg -Ssuccess-only 2026-05-05 07:45:34,602 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:45:34,602 [ scc.repo] DEBUG ## PRs found: 2026-05-05 07:45:35,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/pulls HTTP/1.1" 200 None 2026-05-05 07:45:35,609 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/issues/14 HTTP/1.1" 200 None 2026-05-05 07:45:35,610 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-05 07:45:36,263 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?page=1 HTTP/1.1" 200 None 2026-05-05 07:45:36,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:45:37,370 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-05 07:45:37,864 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/commits/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?page=1 HTTP/1.1" 200 None 2026-05-05 07:45:38,481 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-upload/statuses/1a4dbe9a31854f4f65c509ea929debf3319ba1ea?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:45:38,482 [ scc.repo] DEBUG - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-05 07:45:38,482 [ scc.repo] DEBUG ## Branches found: 2026-05-05 07:45:38,482 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-05-05 07:45:38,482 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:45:38,482 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:45:38,485 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-05 07:45:38,487 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-05 07:45:38,487 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-05 07:45:38,489 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-05 07:45:38,492 [ scc.git] DEBUG Already up to date. 2026-05-05 07:45:38,493 [ scc.git] DEBUG Calling 'git fetch origin pull/14/head' 2026-05-05 07:45:38,855 [ scc.git] DEBUG From https://github.com/ome/omero-upload 2026-05-05 07:45:38,855 [ scc.git] DEBUG * branch refs/pull/14/head -> FETCH_HEAD 2026-05-05 07:45:38,860 [ scc.git] DEBUG ## Unique users: [] 2026-05-05 07:45:38,860 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:45:38,860 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:45:38,862 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-05-05 07:45:38,865 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:45:38,867 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 14 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 1a4dbe9a31854f4f65c509ea929debf3319ba1ea' 2026-05-05 07:45:38,873 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-05 07:45:38,876 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-05 07:45:38,876 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-05 07:45:39,073 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:45:39,074 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-05 07:45:39,112 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:45:39,112 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:45:39,114 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:45:39,152 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-05 07:45:39,155 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa3ad631290> has no local changes 2026-05-05 07:45:39,155 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#134 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/)' 2026-05-05 07:45:39,161 [ scc.git] DEBUG [detached HEAD 02b2c4a] merge master -Dorg -Ssuccess-only 2026-05-05 07:45:39,161 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:45:39,161 [ scc.repo] DEBUG ## PRs found: 2026-05-05 07:45:39,642 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls HTTP/1.1" 200 None 2026-05-05 07:45:40,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/issues/22 HTTP/1.1" 200 None 2026-05-05 07:45:40,210 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-05 07:45:40,891 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902?page=1 HTTP/1.1" 200 None 2026-05-05 07:45:41,454 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:45:42,005 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-05 07:45:42,534 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/commits/2ee819462af52bf2878fadf06d6ebdbafb8f1902?page=1 HTTP/1.1" 200 None 2026-05-05 07:45:42,991 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/statuses/2ee819462af52bf2878fadf06d6ebdbafb8f1902?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:45:42,991 [ scc.repo] DEBUG - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-05 07:45:42,991 [ scc.repo] DEBUG ## Branches found: 2026-05-05 07:45:42,991 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-05-05 07:45:42,991 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:45:42,992 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:45:42,994 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-05 07:45:42,996 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-05 07:45:42,997 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-05 07:45:42,999 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-05 07:45:43,006 [ scc.git] DEBUG Updating deab817..160d894 2026-05-05 07:45:43,769 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-virtual-microscope/pulls/20 HTTP/1.1" 200 None 2026-05-05 07:45:43,770 [ scc.git] DEBUG Calling 'git fetch origin pull/22/head' 2026-05-05 07:45:44,099 [ scc.git] DEBUG From https://github.com/ome/omero-virtual-microscope 2026-05-05 07:45:44,099 [ scc.git] DEBUG * branch refs/pull/22/head -> FETCH_HEAD 2026-05-05 07:45:44,103 [ scc.git] DEBUG ## Unique users: [] 2026-05-05 07:45:44,103 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:45:44,103 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:45:44,105 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-05-05 07:45:44,108 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:45:44,110 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 22 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 2ee819462af52bf2878fadf06d6ebdbafb8f1902' 2026-05-05 07:45:44,116 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-05 07:45:44,119 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-05 07:45:44,119 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-05 07:45:44,311 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:45:44,311 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-05 07:45:44,350 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:45:44,350 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:45:44,352 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:45:44,389 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-05 07:45:44,392 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa3ae824050> has no local changes 2026-05-05 07:45:44,392 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#134 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/)' 2026-05-05 07:45:44,398 [ scc.git] DEBUG [detached HEAD 8de9c73] merge master -Dorg -Ssuccess-only 2026-05-05 07:45:44,398 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:45:44,399 [ scc.git] INFO Overriding base-branch from master to main 2026-05-05 07:45:44,399 [ scc.repo] DEBUG ## PRs found: 2026-05-05 07:45:44,890 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls HTTP/1.1" 200 None 2026-05-05 07:45:45,415 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21 HTTP/1.1" 200 None 2026-05-05 07:45:45,939 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/21/comments HTTP/1.1" 200 None 2026-05-05 07:45:46,539 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc?page=1 HTTP/1.1" 200 None 2026-05-05 07:45:47,085 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:45:47,633 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-05 07:45:48,135 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/d07067753650282c9e8cdbbeae37897b7ed0d4cc?page=1 HTTP/1.1" 200 None 2026-05-05 07:45:48,616 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/d07067753650282c9e8cdbbeae37897b7ed0d4cc?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:45:48,617 [ scc.repo] DEBUG - PR 21 will-moore 'Web zarr import' 2026-05-05 07:45:49,139 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/16 HTTP/1.1" 200 None 2026-05-05 07:45:49,646 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10 HTTP/1.1" 200 None 2026-05-05 07:45:50,164 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/issues/10/comments HTTP/1.1" 200 None 2026-05-05 07:45:50,744 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8?page=1 HTTP/1.1" 200 None 2026-05-05 07:45:51,262 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:45:51,748 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/commits/85cf4c893f393da6763bf4cee2a308832a41a9e8?page=1 HTTP/1.1" 200 None 2026-05-05 07:45:52,210 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/statuses/85cf4c893f393da6763bf4cee2a308832a41a9e8?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:45:52,211 [ scc.repo] DEBUG - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-05-05 07:45:52,211 [ scc.repo] DEBUG ## Branches found: 2026-05-05 07:45:52,211 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-05-05 07:45:52,211 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:45:52,211 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:45:52,214 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/main' 2026-05-05 07:45:52,216 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-05 07:45:52,216 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/main' 2026-05-05 07:45:52,219 [ scc.git] DEBUG Calling 'git merge --ff-only origin/main' 2026-05-05 07:45:52,225 [ scc.git] DEBUG Updating 8f3c313..4e1e685 2026-05-05 07:45:53,004 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/23 HTTP/1.1" 200 None 2026-05-05 07:45:53,749 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-web-zarr/pulls/20 HTTP/1.1" 200 None 2026-05-05 07:45:53,750 [ scc.git] DEBUG Calling 'git fetch origin pull/10/head' 2026-05-05 07:45:54,116 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-05-05 07:45:54,116 [ scc.git] DEBUG * branch refs/pull/10/head -> FETCH_HEAD 2026-05-05 07:45:54,121 [ scc.git] DEBUG Calling 'git fetch origin pull/21/head' 2026-05-05 07:45:54,803 [ scc.git] DEBUG From https://github.com/ome/omero-web-zarr 2026-05-05 07:45:54,804 [ scc.git] DEBUG * branch refs/pull/21/head -> FETCH_HEAD 2026-05-05 07:45:54,808 [ scc.git] DEBUG ## Unique users: [] 2026-05-05 07:45:54,808 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:45:54,808 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:45:54,810 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-05-05 07:45:54,813 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:45:54,815 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 10 (Add Openwith -> itk-vtk viewer) 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-05-05 07:45:54,833 [ scc.git] DEBUG Auto-merging README.rst 2026-05-05 07:45:54,833 [ scc.git] DEBUG Auto-merging omero_web_zarr/urls.py 2026-05-05 07:45:54,833 [ scc.git] DEBUG CONFLICT (content): Merge conflict in omero_web_zarr/urls.py 2026-05-05 07:45:54,833 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-05-05 07:45:54,833 [ scc.git] DEBUG Automatic merge failed; fix conflicts and then commit the result. 2026-05-05 07:45:54,833 [ scc.git] DEBUG Calling 'git diff --name-only --diff-filter=U' 2026-05-05 07:45:54,836 [ scc.git] DEBUG Calling 'git reset --hard 4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-05-05 07:45:54,839 [ scc.git] DEBUG HEAD is now at 4e1e685 Merge pull request #23 from lubianat/patch-1 2026-05-05 07:45:55,041 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:45:55,042 [ scc.git] DEBUG Calling 'git merge-base 4e1e685dff22136abfd2626f6fd6eaf985aba368 85cf4c893f393da6763bf4cee2a308832a41a9e8' 2026-05-05 07:45:55,045 [ scc.git] DEBUG Calling 'git diff --name-only daa26b83ec1c94ace0c1eedcfb7d38c9185503d7..4e1e685dff22136abfd2626f6fd6eaf985aba368' 2026-05-05 07:45:55,047 [ scc.git] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Conflicting PR. Removed from build [OMERO-plugins-push#134](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/). See the [console output](https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/consoleText) for more details. Possible conflicts: - Upstream changes - omero_web_zarr/urls.py --conflicts 2026-05-05 07:45:55,050 [ scc.config] DEBUG Found github.token 2026-05-05 07:45:55,050 [ scc.git] DEBUG Not adding comment to issue #10, already --conflicts. 2026-05-05 07:45:55,050 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-05-05 07:45:55,052 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:45:55,054 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 21 (Web zarr import) d07067753650282c9e8cdbbeae37897b7ed0d4cc' 2026-05-05 07:45:55,063 [ scc.git] DEBUG Auto-merging README.rst 2026-05-05 07:45:55,063 [ scc.git] DEBUG Auto-merging omero_web_zarr/views.py 2026-05-05 07:45:55,064 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-05 07:45:55,067 [ scc.git] DEBUG README.rst | 3 + 2026-05-05 07:45:55,067 [ scc.git] DEBUG .../templates/omero_web_zarr/zarr_import.html | 358 +++++++++++++++++++++ 2026-05-05 07:45:55,067 [ scc.git] DEBUG omero_web_zarr/urls.py | 2 + 2026-05-05 07:45:55,067 [ scc.git] DEBUG omero_web_zarr/views.py | 43 ++- 2026-05-05 07:45:55,067 [ scc.git] DEBUG setup.py | 5 +- 2026-05-05 07:45:55,067 [ scc.git] DEBUG 5 files changed, 409 insertions(+), 2 deletions(-) 2026-05-05 07:45:55,067 [ scc.git] DEBUG create mode 100644 omero_web_zarr/templates/omero_web_zarr/zarr_import.html 2026-05-05 07:45:55,484 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:45:55,485 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-05 07:45:55,523 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:45:55,524 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:45:55,526 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:45:55,563 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-05 07:45:55,566 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa3ad65bed0> has no local changes 2026-05-05 07:45:55,566 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Generated by OMERO-plugins-push#134 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/)' 2026-05-05 07:45:55,573 [ scc.git] DEBUG [detached HEAD 39de5ad] merge master -Dorg -Ssuccess-only 2026-05-05 07:45:55,573 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:45:55,573 [ scc.repo] DEBUG ## PRs found: 2026-05-05 07:45:56,066 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/pulls HTTP/1.1" 200 None 2026-05-05 07:45:56,590 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/issues/25 HTTP/1.1" 200 None 2026-05-05 07:45:56,591 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-05 07:45:57,285 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9?page=1 HTTP/1.1" 200 None 2026-05-05 07:45:57,865 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:45:58,823 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-05 07:45:59,327 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/commits/c73bedb717b9ecce0af666245d3486aa5a2dafe9?page=1 HTTP/1.1" 200 None 2026-05-05 07:45:59,786 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-weberror/statuses/c73bedb717b9ecce0af666245d3486aa5a2dafe9?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:45:59,787 [ scc.repo] DEBUG - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-05 07:45:59,787 [ scc.repo] DEBUG ## Branches found: 2026-05-05 07:45:59,787 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-05-05 07:45:59,787 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:45:59,787 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:45:59,790 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-05 07:45:59,792 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-05 07:45:59,792 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-05 07:45:59,795 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-05 07:45:59,798 [ scc.git] DEBUG Already up to date. 2026-05-05 07:45:59,798 [ scc.git] DEBUG Calling 'git fetch origin pull/25/head' 2026-05-05 07:46:00,192 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-weberror 2026-05-05 07:46:00,192 [ scc.git] DEBUG * branch refs/pull/25/head -> FETCH_HEAD 2026-05-05 07:46:00,196 [ scc.git] DEBUG ## Unique users: [] 2026-05-05 07:46:00,197 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:46:00,197 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:46:00,199 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-05-05 07:46:00,201 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:46:00,203 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 25 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) c73bedb717b9ecce0af666245d3486aa5a2dafe9' 2026-05-05 07:46:00,209 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-05 07:46:00,211 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-05 07:46:00,212 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-05 07:46:00,407 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:46:00,408 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-05 07:46:00,447 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:46:00,447 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:46:00,449 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:46:00,487 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-05 07:46:00,490 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa3ad680d50> has no local changes 2026-05-05 07:46:00,490 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#134 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/)' 2026-05-05 07:46:00,496 [ scc.git] DEBUG [detached HEAD 8cd4312] merge master -Dorg -Ssuccess-only 2026-05-05 07:46:00,496 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:46:00,496 [ scc.repo] DEBUG ## PRs found: 2026-05-05 07:46:00,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/pulls HTTP/1.1" 200 None 2026-05-05 07:46:01,541 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/issues/37 HTTP/1.1" 200 None 2026-05-05 07:46:01,541 [ scc.repo] DEBUG # ... Include label: dependencies 2026-05-05 07:46:02,179 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478?page=1 HTTP/1.1" 200 None 2026-05-05 07:46:02,757 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368&per_page=1 HTTP/1.1" 200 None 2026-05-05 07:46:03,452 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478/check-suites?app_id=15368 HTTP/1.1" 200 None 2026-05-05 07:46:03,969 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/commits/8cf5f7e65ae8e945b134e41e77bc13a785aff478?page=1 HTTP/1.1" 200 None 2026-05-05 07:46:04,469 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-webtest/statuses/8cf5f7e65ae8e945b134e41e77bc13a785aff478?per_page=1 HTTP/1.1" 200 2 2026-05-05 07:46:04,470 [ scc.repo] DEBUG - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-05 07:46:04,470 [ scc.repo] DEBUG ## Branches found: 2026-05-05 07:46:04,470 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-05-05 07:46:04,470 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:46:04,470 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:46:04,473 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-05 07:46:04,475 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-05 07:46:04,475 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-05 07:46:04,478 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-05 07:46:04,481 [ scc.git] DEBUG Already up to date. 2026-05-05 07:46:04,481 [ scc.git] DEBUG Calling 'git fetch origin pull/37/head' 2026-05-05 07:46:04,840 [ scc.git] DEBUG From https://github.com/openmicroscopy/omero-webtest 2026-05-05 07:46:04,841 [ scc.git] DEBUG * branch refs/pull/37/head -> FETCH_HEAD 2026-05-05 07:46:04,845 [ scc.git] DEBUG ## Unique users: [] 2026-05-05 07:46:04,846 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:46:04,846 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:46:04,848 [ scc.git] DEBUG Calling 'git diff --name-only HEAD...8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-05-05 07:46:04,850 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:46:04,853 [ scc.git] DEBUG Calling 'git merge --no-ff -m merge master -Dorg -Ssuccess-only: PR 37 (Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows) 8cf5f7e65ae8e945b134e41e77bc13a785aff478' 2026-05-05 07:46:04,859 [ scc.git] DEBUG Merge made by the 'ort' strategy. 2026-05-05 07:46:04,862 [ scc.git] DEBUG .github/workflows/publish_pypi.yml | 2 +- 2026-05-05 07:46:04,862 [ scc.git] DEBUG 1 file changed, 1 insertion(+), 1 deletion(-) 2026-05-05 07:46:05,065 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:46:05,066 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-05 07:46:05,103 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:46:05,103 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:46:05,106 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:46:05,142 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-05 07:46:05,145 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa3ad6181d0> has no local changes 2026-05-05 07:46:05,145 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Generated by OMERO-plugins-push#134 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/)' 2026-05-05 07:46:05,150 [ scc.git] DEBUG [detached HEAD 69e9674] merge master -Dorg -Ssuccess-only 2026-05-05 07:46:05,151 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:46:05,151 [ scc.repo] DEBUG ## PRs found: 2026-05-05 07:46:05,542 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/rOMERO-gateway/pulls HTTP/1.1" 200 2 2026-05-05 07:46:05,542 [ scc.repo] DEBUG ## Branches found: 2026-05-05 07:46:05,542 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-05-05 07:46:05,542 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:46:05,542 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:46:05,545 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/master' 2026-05-05 07:46:05,547 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-05 07:46:05,547 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/master' 2026-05-05 07:46:05,551 [ scc.git] DEBUG Calling 'git merge --ff-only origin/master' 2026-05-05 07:46:05,554 [ scc.git] DEBUG Already up to date. 2026-05-05 07:46:05,554 [ scc.git] DEBUG ## Unique users: [] 2026-05-05 07:46:05,554 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:46:05,554 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:46:05,556 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-05 07:46:05,592 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:46:05,592 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:46:05,595 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:46:05,629 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-05 07:46:05,632 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa3ad67b850> has no local changes 2026-05-05 07:46:05,632 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/rOMERO-gateway Already up to date. Generated by OMERO-plugins-push#134 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/)' 2026-05-05 07:46:05,638 [ scc.git] DEBUG [detached HEAD 92767bc] merge master -Dorg -Ssuccess-only 2026-05-05 07:46:05,638 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:46:05,638 [ scc.git] INFO Overriding base-branch from master to develop 2026-05-05 07:46:05,638 [ scc.repo] DEBUG ## PRs found: 2026-05-05 07:46:06,011 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls HTTP/1.1" 200 2 2026-05-05 07:46:06,011 [ scc.repo] DEBUG ## Branches found: 2026-05-05 07:46:06,011 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-05-05 07:46:06,011 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:46:06,011 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:46:06,014 [ scc.git] DEBUG Calling 'git show-ref --verify --quiet refs/remotes/origin/develop' 2026-05-05 07:46:06,016 [ scc.git] DEBUG ## Merging base to ensure closed PRs are included. 2026-05-05 07:46:06,016 [ scc.git] DEBUG Calling 'git log --oneline --first-parent HEAD..origin/develop' 2026-05-05 07:46:06,018 [ scc.git] DEBUG Calling 'git merge --ff-only origin/develop' 2026-05-05 07:46:06,030 [ scc.git] DEBUG Updating 4b4c755..5b4d768 2026-05-05 07:46:06,681 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/231 HTTP/1.1" 200 None 2026-05-05 07:46:07,382 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/229 HTTP/1.1" 200 None 2026-05-05 07:46:08,163 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/223 HTTP/1.1" 200 None 2026-05-05 07:46:08,854 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/230 HTTP/1.1" 200 None 2026-05-05 07:46:09,571 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/228 HTTP/1.1" 200 None 2026-05-05 07:46:10,348 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/227 HTTP/1.1" 200 None 2026-05-05 07:46:11,054 [urllib3.conn] DEBUG https://api.github.com:443 "GET /repos/ome/omero-scripts/pulls/225 HTTP/1.1" 200 None 2026-05-05 07:46:11,055 [ scc.git] DEBUG ## Unique users: [] 2026-05-05 07:46:11,055 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:46:11,055 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:46:11,058 [ scc.git] DEBUG Calling 'git submodule update' 2026-05-05 07:46:11,097 [ scc.git] DEBUG Get sha1 of %s 2026-05-05 07:46:11,097 [ scc.git] DEBUG Calling 'git rev-parse HEAD' 2026-05-05 07:46:11,099 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:46:11,138 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-05 07:46:11,142 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa3ac4a4f90> has no local changes 2026-05-05 07:46:11,142 [ scc.git] DEBUG Calling 'git commit --allow-empty -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/scripts Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Generated by OMERO-plugins-push#134 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/)' 2026-05-05 07:46:11,148 [ scc.git] DEBUG [detached HEAD bb6c63c] merge master -Dorg -Ssuccess-only 2026-05-05 07:46:11,148 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:46:11,148 [ scc.git] DEBUG Calling 'git submodule --quiet foreach echo $path' 2026-05-05 07:46:11,218 [ scc.config] DEBUG Found submodule.minimal-omero-client.url 2026-05-05 07:46:11,489 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:46:11,494 [ scc.config] DEBUG Found submodule.minimal-omero-client.branch 2026-05-05 07:46:11,495 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.url 2026-05-05 07:46:11,944 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:46:11,948 [ scc.config] DEBUG Found submodule.omero-cli-duplicate.branch 2026-05-05 07:46:11,950 [ scc.config] DEBUG Found submodule.omero-cli-render.url 2026-05-05 07:46:12,389 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:46:12,393 [ scc.config] DEBUG Found submodule.omero-cli-render.branch 2026-05-05 07:46:12,394 [ scc.config] DEBUG Found submodule.omero-cli-zarr.url 2026-05-05 07:46:12,831 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:46:12,837 [ scc.config] DEBUG Found submodule.omero-figure.url 2026-05-05 07:46:13,274 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:46:13,279 [ scc.config] DEBUG Found submodule.omero-figure.branch 2026-05-05 07:46:13,280 [ scc.config] DEBUG Found submodule.omero-fpbioimage.url 2026-05-05 07:46:13,721 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:46:13,725 [ scc.config] DEBUG Found submodule.omero-fpbioimage.branch 2026-05-05 07:46:13,727 [ scc.config] DEBUG Found submodule.omero-gallery.url 2026-05-05 07:46:14,197 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:46:14,202 [ scc.config] DEBUG Found submodule.omero-gallery.branch 2026-05-05 07:46:14,204 [ scc.config] DEBUG Found submodule.omero-iviewer.url 2026-05-05 07:46:14,652 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:46:14,658 [ scc.config] DEBUG Found submodule.omero-iviewer.branch 2026-05-05 07:46:14,660 [ scc.config] DEBUG Found submodule.omero-mapr.url 2026-05-05 07:46:15,094 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:46:15,099 [ scc.config] DEBUG Found submodule.omero-mapr.branch 2026-05-05 07:46:15,101 [ scc.config] DEBUG Found submodule.omero-metadata.url 2026-05-05 07:46:15,532 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:46:15,537 [ scc.config] DEBUG Found submodule.omero-metadata.branch 2026-05-05 07:46:15,539 [ scc.config] DEBUG Found submodule.omero-parade.url 2026-05-05 07:46:15,986 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:46:15,990 [ scc.config] DEBUG Found submodule.omero-parade.branch 2026-05-05 07:46:15,992 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.url 2026-05-05 07:46:16,582 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:46:16,586 [ scc.config] DEBUG Found submodule.omero-prometheus-tools.branch 2026-05-05 07:46:16,588 [ scc.config] DEBUG Found submodule.omero-rois.url 2026-05-05 07:46:17,049 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:46:17,055 [ scc.config] DEBUG Found submodule.omero-signup.url 2026-05-05 07:46:17,505 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:46:17,510 [ scc.config] DEBUG Found submodule.omero-test-infra.url 2026-05-05 07:46:17,958 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:46:17,962 [ scc.config] DEBUG Found submodule.omero-test-infra.branch 2026-05-05 07:46:17,964 [ scc.config] DEBUG Found submodule.omero-upload.url 2026-05-05 07:46:18,393 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:46:18,399 [ scc.config] DEBUG Found submodule.omero-virtual-microscope.url 2026-05-05 07:46:18,876 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:46:18,883 [ scc.config] DEBUG Found submodule.omero-web-zarr.url 2026-05-05 07:46:19,323 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:46:19,327 [ scc.config] DEBUG Found submodule.omero-web-zarr.branch 2026-05-05 07:46:19,329 [ scc.config] DEBUG Found submodule.omero-weberror.url 2026-05-05 07:46:19,780 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:46:19,788 [ scc.config] DEBUG Found submodule.omero-weberror.branch 2026-05-05 07:46:19,790 [ scc.config] DEBUG Found submodule.omero-webtest.url 2026-05-05 07:46:20,229 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:46:20,233 [ scc.config] DEBUG Found submodule.omero-webtest.branch 2026-05-05 07:46:20,235 [ scc.config] DEBUG Found submodule.rOMERO-gateway.url 2026-05-05 07:46:20,678 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:46:20,683 [ scc.config] DEBUG Found submodule.rOMERO-gateway.branch 2026-05-05 07:46:20,684 [ scc.config] DEBUG Found submodule.scripts.url 2026-05-05 07:46:21,121 [urllib3.conn] DEBUG https://api.github.com:443 "GET /user HTTP/1.1" 200 None 2026-05-05 07:46:21,125 [ scc.config] DEBUG Found submodule.scripts.branch 2026-05-05 07:46:21,125 [ scc.git] DEBUG Calling 'git status --porcelain' 2026-05-05 07:46:21,199 [ scc.git] DEBUG <scc.git.GitRepository object at 0x7fa3ae6c7090> has local changes 2026-05-05 07:46:21,199 [ scc.git] DEBUG Calling 'git commit -a -n -m merge master -Dorg -Ssuccess-only Repository: ome/omero-plugins Already up to date. Merged PRs: - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' Repository: ome/minimal-omero-client Already up to date. Repository: ome/omero-cli-duplicate Excluded PRs: - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) Already up to date. Merged PRs: - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-cli-render Excluded PRs: - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) Updating ce6e13c..68b7303 Previously merged: - PR 74 jburel 'Replace manual changelog by automated GH release step' - PR 75 jburel 'Sort the new channels to ensure settings are set' - PR 71 dominikl 'Escape slash character in image names' - PR 69 dominikl 'Fix help text for impo/export commands' Merged PRs: - PR 59 will-moore 'Apply settings to Plate' Repository: ome/omero-cli-zarr Excluded PRs: - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure) - PR 181 will-moore 'Add labels support for import' (exclude comment) - PR 170 will-moore 'Use ome zarr models py' (stage: draft) - PR 167 dominikl 'Add extinfo command' (stage: draft) - PR 166 will-moore 'Downsample scale option' (stage: draft) - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) Updating 11d3587..9f844b8 Previously merged: - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' - PR 192 jburel 'Set Omero pixel size' - PR 186 jburel 'Create release from tag' - PR 187 dominikl 'Fix target-by-name option' - PR 180 will-moore 'Import command' - PR 179 will-moore 'Changelog 0.6.0' - PR 177 jburel 'Replace fromstring by frombuffer' - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' - PR 147 will-moore 'Name option' - PR 173 will-moore 'Add test_export_plate_polygons()' - PR 171 will-moore 'Initial addition of integration tests' - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 193 dominikl 'Only parse import uris if stated' Conflicting PRs (not included): - PR 174 will-moore 'Skip wells' - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' - PR 182 will-moore 'Revert "Remove support for Plate import"' Repository: ome/omero-figure Excluded PRs: - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) Updating 9cc36cde..f94afbb2 Previously merged: - PR 685 will-moore 'Fix static files links for release build' - PR 683 will-moore 'Add touch support for clicking on single panel' - PR 680 will-moore 'Use --pre install for export script in README' - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' - PR 666 will-moore 'Standalone app' - PR 676 dependabot[bot] 'Bump picomatch' - PR 669 will-moore 'Standalone python script' - PR 662 will-moore 'Export script handles OME-zarr images' - PR 663 will-moore 'Zarr' - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' - PR 667 Tom-TBT 'Label suggestion interface' - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' - PR 664 Nirkan 'Handle many channels ' - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' - PR 649 jburel 'Replace manual changelog by automated GH release step' - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' - PR 637 Rdornier 'Fix scalebar position' - PR 600 Rdornier 'Label on rois' - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' - PR 651 Rdornier 'More compliant align to grid' - PR 650 jburel 'Bump Python version' - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' - PR 610 will-moore 'Add docs/contributing.rst' - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' - PR 646 JensWendt 'fix word wrap of image names' - PR 612 will-moore 'Script version' - PR 630 will-moore 'Fix color and position for ALL new panel insets' - PR 616 Rdornier 'Fix labels around border' - PR 605 Tom-TBT 'Colorbar feature' - PR 638 Rdornier 'Fix arrow opacity' - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' - PR 635 dependabot[bot] 'Bump esbuild and vite' - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' Repository: ome/omero-fpbioimage Already up to date. Merged PRs: - PR 18 jburel 'default size z value' - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-gallery Already up to date. Merged PRs: - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' - PR 114 dependabot[bot] 'Bump tar and fsevents' - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' Conflicting PRs (not included): - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' Repository: ome/omero-iviewer Excluded PRs: - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) - PR 508 will-moore 'Broadcast channel demo' (stage: draft) - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) - PR 420 will-moore 'Add release process to README' (exclude comment) - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) - PR 227 will-moore 'Vectortile investigation' (status: failure) Updating 7a798ce..02bc855 Previously merged: - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' - PR 513 jburel 'Bump Python version' - PR 512 jburel 'Replace manual changelog by automated GH release step' - PR 465 will-moore 'Save as Figure' - PR 517 will-moore 'Fix roi link permissions' - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' - PR 510 joshmoore 'Re-enable omero-test-infra' - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 460 will-moore 'Channel min spinner fix' - PR 471 will-moore 'Z projection disabled tooltip' - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' Repository: ome/omero-mapr Excluded PRs: - PR 79 will-moore 'Right panel title' (exclude comment) Already up to date. Merged PRs: - PR 74 will-moore 'mapr extension of webclient' - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Conflicting PRs (not included): - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-metadata Updating 3cd120c..55060a2 Previously merged: - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Merged PRs: - PR 92 dominikl 'add resolve_rois to projectwrapper' Conflicting PRs (not included): - PR 55 kkoz 'Prevent users from creating columns with python keyword names' - PR 64 will-moore 'Support images_by_name for Screen and Plate' Repository: ome/omero-parade Excluded PRs: - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) - PR 39 chris-allan 'Expand all for Screens' (exclude comment) Already up to date. Merged PRs: - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' Repository: ome/omero-prometheus-tools Already up to date. Merged PRs: - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-rois Excluded PRs: - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) Updating bdfeb5e..fc9ff96 Previously merged: - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' - PR 35 will-moore 'Add roi to array functions' Repository: ome/omero-signup Already up to date. Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Conflicting PRs (not included): - PR 14 manics 'Add pre-commit (black, flake8)' Repository: openmicroscopy/omero-test-infra Excluded PRs: - PR 75 marimeireles 'Microservices' (user: marimeireles) Updating cda3ec6..c8a0015 Previously merged: - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' - PR 82 jburel 'Upgrade python' - PR 81 erickmartins 'add ulimits to omero-server container' Merged PRs: - PR 74 joshmoore 'Add 'ms' target for ./docker' Repository: ome/omero-upload Already up to date. Merged PRs: - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-virtual-microscope Updating deab817..160d894 Previously merged: - PR 20 jburel 'Build' Merged PRs: - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/omero-web-zarr Excluded PRs: - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) Updating 8f3c313..4e1e685 Previously merged: - PR 23 lubianat 'Fix mix of .rst and .md on README' - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' Merged PRs: - PR 21 will-moore 'Web zarr import' Conflicting PRs (not included): - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' Repository: openmicroscopy/omero-weberror Already up to date. Merged PRs: - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: openmicroscopy/omero-webtest Already up to date. Merged PRs: - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' Repository: ome/rOMERO-gateway Already up to date. Repository: ome/scripts Updating 4b4c755..5b4d768 Previously merged: - PR 231 jburel 'Create Release ' - PR 229 Rdornier 'Adding support for custom user label' - PR 223 will-moore 'don't attempt ROI stats on big images' - PR 230 Rdornier 'Import from csv fix' - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' - PR 227 jburel 'Replace tostring by tobytes' - PR 225 will-moore 'Fix param names and assertion texts in tests' Generated by OMERO-plugins-push#134 (https://merge-ci.openmicroscopy.org/jenkins/job/OMERO-plugins-push/134/)' 2026-05-05 07:46:21,211 [ scc.git] DEBUG [detached HEAD be17dd3] merge master -Dorg -Ssuccess-only 2026-05-05 07:46:21,211 [ scc.git] DEBUG 23 files changed, 44 insertions(+), 44 deletions(-) 2026-05-05 07:46:21,211 [ scc.merge] INFO Repository: ome/omero-plugins 2026-05-05 07:46:21,211 [ scc.merge] INFO Already up to date. 2026-05-05 07:46:21,211 [ scc.merge] INFO 2026-05-05 07:46:21,211 [ scc.merge] INFO Merged PRs: 2026-05-05 07:46:21,211 [ scc.merge] INFO - PR 429 dependabot[bot] 'Bump scripts from `312afbe` to `4b4c755`' 2026-05-05 07:46:21,211 [ scc.merge] INFO - PR 432 dependabot[bot] 'Bump omero-figure from `fb316a7` to `9cc36cd`' 2026-05-05 07:46:21,211 [ scc.merge] INFO - PR 433 dependabot[bot] 'Bump omero-iviewer from `b4102d4` to `7a798ce`' 2026-05-05 07:46:21,211 [ scc.merge] INFO 2026-05-05 07:46:21,211 [ scc.merge] INFO Repository: ome/minimal-omero-client 2026-05-05 07:46:21,211 [ scc.merge] INFO Already up to date. 2026-05-05 07:46:21,211 [ scc.merge] INFO 2026-05-05 07:46:21,211 [ scc.merge] INFO 2026-05-05 07:46:21,211 [ scc.merge] INFO Repository: ome/omero-cli-duplicate 2026-05-05 07:46:21,211 [ scc.merge] INFO Excluded PRs: 2026-05-05 07:46:21,211 [ scc.merge] INFO - PR 18 joshmoore 'Enable pipeline of duplicate output to, e.g., chgrp' (exclude comment) 2026-05-05 07:46:21,211 [ scc.merge] INFO Already up to date. 2026-05-05 07:46:21,211 [ scc.merge] INFO 2026-05-05 07:46:21,211 [ scc.merge] INFO Merged PRs: 2026-05-05 07:46:21,211 [ scc.merge] INFO - PR 29 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-05 07:46:21,211 [ scc.merge] INFO 2026-05-05 07:46:21,211 [ scc.merge] INFO Repository: ome/omero-cli-render 2026-05-05 07:46:21,211 [ scc.merge] INFO Excluded PRs: 2026-05-05 07:46:21,212 [ scc.merge] INFO - PR 52 manics ' Add batchset for rendering a hierarchy of containers (single file)' (stage: draft) 2026-05-05 07:46:21,212 [ scc.merge] INFO Updating ce6e13c..68b7303 2026-05-05 07:46:21,212 [ scc.merge] INFO Previously merged: 2026-05-05 07:46:21,212 [ scc.merge] INFO - PR 74 jburel 'Replace manual changelog by automated GH release step' 2026-05-05 07:46:21,212 [ scc.merge] INFO - PR 75 jburel 'Sort the new channels to ensure settings are set' 2026-05-05 07:46:21,212 [ scc.merge] INFO - PR 71 dominikl 'Escape slash character in image names' 2026-05-05 07:46:21,212 [ scc.merge] INFO - PR 69 dominikl 'Fix help text for impo/export commands' 2026-05-05 07:46:21,212 [ scc.merge] INFO 2026-05-05 07:46:21,212 [ scc.merge] INFO Merged PRs: 2026-05-05 07:46:21,212 [ scc.merge] INFO - PR 59 will-moore 'Apply settings to Plate' 2026-05-05 07:46:21,212 [ scc.merge] INFO 2026-05-05 07:46:21,212 [ scc.merge] INFO Repository: ome/omero-cli-zarr 2026-05-05 07:46:21,212 [ scc.merge] INFO Excluded PRs: 2026-05-05 07:46:21,212 [ scc.merge] INFO - PR 194 will-moore 'Update uk1s3.embassy links to livingobjects' (status: failure) 2026-05-05 07:46:21,212 [ scc.merge] INFO - PR 181 will-moore 'Add labels support for import' (exclude comment) 2026-05-05 07:46:21,212 [ scc.merge] INFO - PR 170 will-moore 'Use ome zarr models py' (stage: draft) 2026-05-05 07:46:21,212 [ scc.merge] INFO - PR 167 dominikl 'Add extinfo command' (stage: draft) 2026-05-05 07:46:21,212 [ scc.merge] INFO - PR 166 will-moore 'Downsample scale option' (stage: draft) 2026-05-05 07:46:21,212 [ scc.merge] INFO - PR 162 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-05-05 07:46:21,212 [ scc.merge] INFO - PR 123 will-moore 'Support export of Fileset:ID' (exclude comment) 2026-05-05 07:46:21,212 [ scc.merge] INFO Updating 11d3587..9f844b8 2026-05-05 07:46:21,212 [ scc.merge] INFO Previously merged: 2026-05-05 07:46:21,212 [ scc.merge] INFO - PR 172 will-moore 'Use zarr v3 and updated ome-zarr-py' 2026-05-05 07:46:21,212 [ scc.merge] INFO - PR 192 jburel 'Set Omero pixel size' 2026-05-05 07:46:21,212 [ scc.merge] INFO - PR 186 jburel 'Create release from tag' 2026-05-05 07:46:21,212 [ scc.merge] INFO - PR 187 dominikl 'Fix target-by-name option' 2026-05-05 07:46:21,212 [ scc.merge] INFO - PR 180 will-moore 'Import command' 2026-05-05 07:46:21,212 [ scc.merge] INFO - PR 179 will-moore 'Changelog 0.6.0' 2026-05-05 07:46:21,212 [ scc.merge] INFO - PR 177 jburel 'Replace fromstring by frombuffer' 2026-05-05 07:46:21,212 [ scc.merge] INFO - PR 175 will-moore 'Pin ome-zarr-py <0.12.0' 2026-05-05 07:46:21,212 [ scc.merge] INFO - PR 147 will-moore 'Name option' 2026-05-05 07:46:21,212 [ scc.merge] INFO - PR 173 will-moore 'Add test_export_plate_polygons()' 2026-05-05 07:46:21,212 [ scc.merge] INFO - PR 171 will-moore 'Initial addition of integration tests' 2026-05-05 07:46:21,212 [ scc.merge] INFO - PR 168 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-05-05 07:46:21,212 [ scc.merge] INFO 2026-05-05 07:46:21,212 [ scc.merge] INFO Merged PRs: 2026-05-05 07:46:21,212 [ scc.merge] INFO - PR 193 dominikl 'Only parse import uris if stated' 2026-05-05 07:46:21,212 [ scc.merge] INFO 2026-05-05 07:46:21,212 [ scc.merge] INFO Conflicting PRs (not included): 2026-05-05 07:46:21,212 [ scc.merge] INFO - PR 174 will-moore 'Skip wells' 2026-05-05 07:46:21,212 [ scc.merge] INFO - PR 178 will-moore 'Fix export of masks with multi-theC as multi-channel labels' 2026-05-05 07:46:21,213 [ scc.merge] INFO - PR 182 will-moore 'Revert "Remove support for Plate import"' 2026-05-05 07:46:21,213 [ scc.merge] INFO 2026-05-05 07:46:21,213 [ scc.merge] INFO Repository: ome/omero-figure 2026-05-05 07:46:21,213 [ scc.merge] INFO Excluded PRs: 2026-05-05 07:46:21,213 [ scc.merge] INFO - PR 641 Rdornier 'OMERO ROIs improvements : filtering visible and adding all' (user: Rdornier) 2026-05-05 07:46:21,213 [ scc.merge] INFO Updating 9cc36cde..f94afbb2 2026-05-05 07:46:21,213 [ scc.merge] INFO Previously merged: 2026-05-05 07:46:21,213 [ scc.merge] INFO - PR 685 will-moore 'Fix static files links for release build' 2026-05-05 07:46:21,213 [ scc.merge] INFO - PR 683 will-moore 'Add touch support for clicking on single panel' 2026-05-05 07:46:21,213 [ scc.merge] INFO - PR 680 will-moore 'Use --pre install for export script in README' 2026-05-05 07:46:21,213 [ scc.merge] INFO - PR 684 will-moore 'Fix PKG_VERSION fix in publish_pypi.yml' 2026-05-05 07:46:21,213 [ scc.merge] INFO - PR 682 will-moore 'Enable pre-release rc workflow with bumpversion and publish to pypi' 2026-05-05 07:46:21,213 [ scc.merge] INFO - PR 679 will-moore 'Remove commit from gist demoUrl to load latest, with livingobjects URLs' 2026-05-05 07:46:21,213 [ scc.merge] INFO - PR 677 dependabot[bot] 'Bump vite from 6.4.1 to 6.4.2' 2026-05-05 07:46:21,213 [ scc.merge] INFO - PR 666 will-moore 'Standalone app' 2026-05-05 07:46:21,213 [ scc.merge] INFO - PR 676 dependabot[bot] 'Bump picomatch' 2026-05-05 07:46:21,213 [ scc.merge] INFO - PR 669 will-moore 'Standalone python script' 2026-05-05 07:46:21,213 [ scc.merge] INFO - PR 662 will-moore 'Export script handles OME-zarr images' 2026-05-05 07:46:21,213 [ scc.merge] INFO - PR 663 will-moore 'Zarr' 2026-05-05 07:46:21,213 [ scc.merge] INFO - PR 674 dependabot[bot] 'Bump immutable from 4.1.0 to 4.3.8' 2026-05-05 07:46:21,213 [ scc.merge] INFO - PR 675 dependabot[bot] 'Bump dompurify from 3.2.4 to 3.3.2' 2026-05-05 07:46:21,213 [ scc.merge] INFO - PR 671 dependabot[bot] 'Bump underscore from 1.13.4 to 1.13.8' 2026-05-05 07:46:21,213 [ scc.merge] INFO - PR 672 Tom-TBT 'Fix field label list and right panel view CSS issues' 2026-05-05 07:46:21,213 [ scc.merge] INFO - PR 667 Tom-TBT 'Label suggestion interface' 2026-05-05 07:46:21,213 [ scc.merge] INFO - PR 665 Tom-TBT 'Ensure projection parameters are within bounds in loadJSON and setID' 2026-05-05 07:46:21,213 [ scc.merge] INFO - PR 656 Tom-TBT 'Option to add roi comment when adding ROI from OMERO' 2026-05-05 07:46:21,213 [ scc.merge] INFO - PR 670 dependabot[bot] 'Bump rollup from 4.39.0 to 4.59.0' 2026-05-05 07:46:21,213 [ scc.merge] INFO - PR 664 Nirkan 'Handle many channels ' 2026-05-05 07:46:21,213 [ scc.merge] INFO - PR 654 Tom-TBT 'Refresh metadata button to reload channel names, pixel sizes' 2026-05-05 07:46:21,213 [ scc.merge] INFO - PR 648 kaabl 'Add well and field label for high-content screening data, fixes #540' 2026-05-05 07:46:21,213 [ scc.merge] INFO - PR 661 Rdornier 'Align to grid - check if panels are already in the grid' 2026-05-05 07:46:21,213 [ scc.merge] INFO - PR 649 jburel 'Replace manual changelog by automated GH release step' 2026-05-05 07:46:21,213 [ scc.merge] INFO - PR 657 will-moore 'Avoid division by zero and don't save x/y NaN in grid layout' 2026-05-05 07:46:21,213 [ scc.merge] INFO - PR 637 Rdornier 'Fix scalebar position' 2026-05-05 07:46:21,213 [ scc.merge] INFO - PR 600 Rdornier 'Label on rois' 2026-05-05 07:46:21,213 [ scc.merge] INFO - PR 653 Nirkan 'Fix Crop dialog scrolling for arbitary angles' 2026-05-05 07:46:21,213 [ scc.merge] INFO - PR 651 Rdornier 'More compliant align to grid' 2026-05-05 07:46:21,213 [ scc.merge] INFO - PR 650 jburel 'Bump Python version' 2026-05-05 07:46:21,213 [ scc.merge] INFO - PR 647 Rdornier 'enable dragging and resizing shapes without having to select it multi…' 2026-05-05 07:46:21,213 [ scc.merge] INFO - PR 610 will-moore 'Add docs/contributing.rst' 2026-05-05 07:46:21,213 [ scc.merge] INFO - PR 644 dependabot[bot] 'Bump vite from 6.2.6 to 6.4.1' 2026-05-05 07:46:21,214 [ scc.merge] INFO - PR 646 JensWendt 'fix word wrap of image names' 2026-05-05 07:46:21,214 [ scc.merge] INFO - PR 612 will-moore 'Script version' 2026-05-05 07:46:21,214 [ scc.merge] INFO - PR 630 will-moore 'Fix color and position for ALL new panel insets' 2026-05-05 07:46:21,214 [ scc.merge] INFO - PR 616 Rdornier 'Fix labels around border' 2026-05-05 07:46:21,214 [ scc.merge] INFO - PR 605 Tom-TBT 'Colorbar feature' 2026-05-05 07:46:21,214 [ scc.merge] INFO - PR 638 Rdornier 'Fix arrow opacity' 2026-05-05 07:46:21,214 [ scc.merge] INFO - PR 633 dependabot[bot] 'Bump dompurify from 2.5.4 to 3.2.4' 2026-05-05 07:46:21,214 [ scc.merge] INFO - PR 635 dependabot[bot] 'Bump esbuild and vite' 2026-05-05 07:46:21,214 [ scc.merge] INFO - PR 623 will-moore 'Fix wrapping of label X button. see issues/622' 2026-05-05 07:46:21,214 [ scc.merge] INFO - PR 631 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-05-05 07:46:21,214 [ scc.merge] INFO 2026-05-05 07:46:21,214 [ scc.merge] INFO Merged PRs: 2026-05-05 07:46:21,214 [ scc.merge] INFO - PR 652 kaabl 'Add export option for PNG (72 dpi), fixes #394 ' 2026-05-05 07:46:21,214 [ scc.merge] INFO - PR 681 dependabot[bot] 'Bump dompurify from 3.3.2 to 3.4.0' 2026-05-05 07:46:21,214 [ scc.merge] INFO - PR 686 will-moore 'Add note about zarr etc requirement for export script with zarr images' 2026-05-05 07:46:21,214 [ scc.merge] INFO - PR 688 will-moore 'app handles ?image=1 without needing /new?image=1' 2026-05-05 07:46:21,214 [ scc.merge] INFO 2026-05-05 07:46:21,214 [ scc.merge] INFO Repository: ome/omero-fpbioimage 2026-05-05 07:46:21,214 [ scc.merge] INFO Already up to date. 2026-05-05 07:46:21,214 [ scc.merge] INFO 2026-05-05 07:46:21,214 [ scc.merge] INFO Merged PRs: 2026-05-05 07:46:21,214 [ scc.merge] INFO - PR 18 jburel 'default size z value' 2026-05-05 07:46:21,214 [ scc.merge] INFO - PR 31 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-05 07:46:21,214 [ scc.merge] INFO 2026-05-05 07:46:21,214 [ scc.merge] INFO Repository: ome/omero-gallery 2026-05-05 07:46:21,214 [ scc.merge] INFO Already up to date. 2026-05-05 07:46:21,214 [ scc.merge] INFO 2026-05-05 07:46:21,214 [ scc.merge] INFO Merged PRs: 2026-05-05 07:46:21,214 [ scc.merge] INFO - PR 113 dependabot[bot] 'Bump elliptic from 6.5.4 to 6.6.1' 2026-05-05 07:46:21,214 [ scc.merge] INFO - PR 114 dependabot[bot] 'Bump tar and fsevents' 2026-05-05 07:46:21,214 [ scc.merge] INFO - PR 116 dependabot[bot] 'Bump browserify-sign from 4.0.4 to 4.2.3' 2026-05-05 07:46:21,214 [ scc.merge] INFO - PR 117 dependabot[bot] 'Bump cross-spawn from 6.0.5 to 6.0.6' 2026-05-05 07:46:21,214 [ scc.merge] INFO 2026-05-05 07:46:21,214 [ scc.merge] INFO Conflicting PRs (not included): 2026-05-05 07:46:21,214 [ scc.merge] INFO - PR 115 dependabot[bot] 'Bump micromatch, webpack-cli and webpack' 2026-05-05 07:46:21,214 [ scc.merge] INFO - PR 118 dependabot[bot] 'Bump braces, webpack-cli and webpack' 2026-05-05 07:46:21,214 [ scc.merge] INFO - PR 119 dependabot[bot] 'Bump serialize-javascript and webpack' 2026-05-05 07:46:21,214 [ scc.merge] INFO 2026-05-05 07:46:21,214 [ scc.merge] INFO Repository: ome/omero-iviewer 2026-05-05 07:46:21,214 [ scc.merge] INFO Excluded PRs: 2026-05-05 07:46:21,214 [ scc.merge] INFO - PR 511 will-moore 'Support img_detail/9837058/?labelimage=9837059 as extra Tile layer' (stage: draft) 2026-05-05 07:46:21,214 [ scc.merge] INFO - PR 508 will-moore 'Broadcast channel demo' (stage: draft) 2026-05-05 07:46:21,215 [ scc.merge] INFO - PR 503 will-moore 'Basic working tile-coordinates grid shown over the image' (stage: draft) 2026-05-05 07:46:21,215 [ scc.merge] INFO - PR 497 will-moore 'Minimal add tags to ROI functionality' (stage: draft) 2026-05-05 07:46:21,215 [ scc.merge] INFO - PR 420 will-moore 'Add release process to README' (exclude comment) 2026-05-05 07:46:21,215 [ scc.merge] INFO - PR 372 will-moore 'viewport URL includes z-plane' (exclude comment) 2026-05-05 07:46:21,215 [ scc.merge] INFO - PR 227 will-moore 'Vectortile investigation' (status: failure) 2026-05-05 07:46:21,215 [ scc.merge] INFO Updating 7a798ce..02bc855 2026-05-05 07:46:21,215 [ scc.merge] INFO Previously merged: 2026-05-05 07:46:21,215 [ scc.merge] INFO - PR 525 dependabot[bot] 'Bump postcss from 8.4.31 to 8.5.10' 2026-05-05 07:46:21,215 [ scc.merge] INFO - PR 524 dependabot[bot] 'Bump protocol-buffers-schema from 3.3.2 to 3.6.1' 2026-05-05 07:46:21,215 [ scc.merge] INFO - PR 523 dependabot[bot] 'Bump follow-redirects from 1.15.6 to 1.16.0' 2026-05-05 07:46:21,215 [ scc.merge] INFO - PR 522 dependabot[bot] 'Bump lodash from 4.17.21 to 4.18.1' 2026-05-05 07:46:21,215 [ scc.merge] INFO - PR 521 dependabot[bot] 'Bump brace-expansion from 1.1.11 to 1.1.13' 2026-05-05 07:46:21,215 [ scc.merge] INFO - PR 520 dependabot[bot] 'Bump node-forge from 1.3.1 to 1.4.0' 2026-05-05 07:46:21,215 [ scc.merge] INFO - PR 519 dependabot[bot] 'Bump picomatch from 2.3.1 to 2.3.2' 2026-05-05 07:46:21,215 [ scc.merge] INFO - PR 518 dependabot[bot] 'Bump ajv from 6.12.6 to 6.14.0' 2026-05-05 07:46:21,215 [ scc.merge] INFO - PR 514 Tom-TBT 'Fix where interpolate_pixels server config is read from' 2026-05-05 07:46:21,215 [ scc.merge] INFO - PR 513 jburel 'Bump Python version' 2026-05-05 07:46:21,215 [ scc.merge] INFO - PR 512 jburel 'Replace manual changelog by automated GH release step' 2026-05-05 07:46:21,215 [ scc.merge] INFO - PR 465 will-moore 'Save as Figure' 2026-05-05 07:46:21,215 [ scc.merge] INFO - PR 517 will-moore 'Fix roi link permissions' 2026-05-05 07:46:21,215 [ scc.merge] INFO - PR 516 dependabot[bot] 'Bump socket.io-parser from 4.2.4 to 4.2.6' 2026-05-05 07:46:21,215 [ scc.merge] INFO - PR 510 joshmoore 'Re-enable omero-test-infra' 2026-05-05 07:46:21,215 [ scc.merge] INFO - PR 506 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-05-05 07:46:21,215 [ scc.merge] INFO 2026-05-05 07:46:21,215 [ scc.merge] INFO Merged PRs: 2026-05-05 07:46:21,215 [ scc.merge] INFO - PR 460 will-moore 'Channel min spinner fix' 2026-05-05 07:46:21,215 [ scc.merge] INFO - PR 471 will-moore 'Z projection disabled tooltip' 2026-05-05 07:46:21,215 [ scc.merge] INFO - PR 526 will-moore 'Add keyboard handling for Left, Right, Up, Down Arrows to pan' 2026-05-05 07:46:21,215 [ scc.merge] INFO 2026-05-05 07:46:21,215 [ scc.merge] INFO Repository: ome/omero-mapr 2026-05-05 07:46:21,215 [ scc.merge] INFO Excluded PRs: 2026-05-05 07:46:21,215 [ scc.merge] INFO - PR 79 will-moore 'Right panel title' (exclude comment) 2026-05-05 07:46:21,215 [ scc.merge] INFO Already up to date. 2026-05-05 07:46:21,215 [ scc.merge] INFO 2026-05-05 07:46:21,215 [ scc.merge] INFO Merged PRs: 2026-05-05 07:46:21,215 [ scc.merge] INFO - PR 74 will-moore 'mapr extension of webclient' 2026-05-05 07:46:21,215 [ scc.merge] INFO - PR 94 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-05-05 07:46:21,215 [ scc.merge] INFO 2026-05-05 07:46:21,215 [ scc.merge] INFO Conflicting PRs (not included): 2026-05-05 07:46:21,215 [ scc.merge] INFO - PR 95 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-05 07:46:21,215 [ scc.merge] INFO 2026-05-05 07:46:21,215 [ scc.merge] INFO Repository: ome/omero-metadata 2026-05-05 07:46:21,216 [ scc.merge] INFO Updating 3cd120c..55060a2 2026-05-05 07:46:21,216 [ scc.merge] INFO Previously merged: 2026-05-05 07:46:21,216 [ scc.merge] INFO - PR 90 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-05-05 07:46:21,216 [ scc.merge] INFO 2026-05-05 07:46:21,216 [ scc.merge] INFO Merged PRs: 2026-05-05 07:46:21,216 [ scc.merge] INFO - PR 92 dominikl 'add resolve_rois to projectwrapper' 2026-05-05 07:46:21,216 [ scc.merge] INFO 2026-05-05 07:46:21,216 [ scc.merge] INFO Conflicting PRs (not included): 2026-05-05 07:46:21,216 [ scc.merge] INFO - PR 55 kkoz 'Prevent users from creating columns with python keyword names' 2026-05-05 07:46:21,216 [ scc.merge] INFO - PR 64 will-moore 'Support images_by_name for Screen and Plate' 2026-05-05 07:46:21,216 [ scc.merge] INFO 2026-05-05 07:46:21,216 [ scc.merge] INFO Repository: ome/omero-parade 2026-05-05 07:46:21,216 [ scc.merge] INFO Excluded PRs: 2026-05-05 07:46:21,216 [ scc.merge] INFO - PR 139 will-moore 'JS code handles 'tag' node in jsTree' (stage: draft) 2026-05-05 07:46:21,216 [ scc.merge] INFO - PR 94 will-moore 'Move axes state to Layout from Plot' (exclude comment) 2026-05-05 07:46:21,216 [ scc.merge] INFO - PR 86 will-moore 'Support filtering by OMERO.tables on Dataset' (exclude comment) 2026-05-05 07:46:21,216 [ scc.merge] INFO - PR 39 chris-allan 'Expand all for Screens' (exclude comment) 2026-05-05 07:46:21,216 [ scc.merge] INFO Already up to date. 2026-05-05 07:46:21,216 [ scc.merge] INFO 2026-05-05 07:46:21,216 [ scc.merge] INFO Merged PRs: 2026-05-05 07:46:21,216 [ scc.merge] INFO - PR 140 dependabot[bot] 'Bump vite from 4.2.3 to 4.5.9' 2026-05-05 07:46:21,216 [ scc.merge] INFO - PR 141 dependabot[bot] 'Bump axios from 1.6.0 to 1.8.2' 2026-05-05 07:46:21,216 [ scc.merge] INFO - PR 142 will-moore 'Use the release/v1 branch for the PyPA action publishing to PyPI' 2026-05-05 07:46:21,216 [ scc.merge] INFO 2026-05-05 07:46:21,216 [ scc.merge] INFO Repository: ome/omero-prometheus-tools 2026-05-05 07:46:21,216 [ scc.merge] INFO Already up to date. 2026-05-05 07:46:21,216 [ scc.merge] INFO 2026-05-05 07:46:21,216 [ scc.merge] INFO Merged PRs: 2026-05-05 07:46:21,216 [ scc.merge] INFO - PR 16 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-05 07:46:21,216 [ scc.merge] INFO 2026-05-05 07:46:21,216 [ scc.merge] INFO Repository: ome/omero-rois 2026-05-05 07:46:21,216 [ scc.merge] INFO Excluded PRs: 2026-05-05 07:46:21,216 [ scc.merge] INFO - PR 32 pre-commit-ci[bot] '[pre-commit.ci] pre-commit autoupdate' (user: pre-commit-ci[bot]) 2026-05-05 07:46:21,216 [ scc.merge] INFO Updating bdfeb5e..fc9ff96 2026-05-05 07:46:21,216 [ scc.merge] INFO Previously merged: 2026-05-05 07:46:21,216 [ scc.merge] INFO - PR 36 will-moore 'Use pypa/gh-action-pypi-publish@release/v1 in publish_pypi.yml' 2026-05-05 07:46:21,216 [ scc.merge] INFO - PR 35 will-moore 'Add roi to array functions' 2026-05-05 07:46:21,216 [ scc.merge] INFO 2026-05-05 07:46:21,216 [ scc.merge] INFO 2026-05-05 07:46:21,216 [ scc.merge] INFO Repository: ome/omero-signup 2026-05-05 07:46:21,216 [ scc.merge] INFO Already up to date. 2026-05-05 07:46:21,216 [ scc.merge] INFO 2026-05-05 07:46:21,216 [ scc.merge] INFO Merged PRs: 2026-05-05 07:46:21,217 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-05 07:46:21,217 [ scc.merge] INFO 2026-05-05 07:46:21,217 [ scc.merge] INFO Conflicting PRs (not included): 2026-05-05 07:46:21,217 [ scc.merge] INFO - PR 14 manics 'Add pre-commit (black, flake8)' 2026-05-05 07:46:21,217 [ scc.merge] INFO 2026-05-05 07:46:21,217 [ scc.merge] INFO Repository: openmicroscopy/omero-test-infra 2026-05-05 07:46:21,217 [ scc.merge] INFO Excluded PRs: 2026-05-05 07:46:21,217 [ scc.merge] INFO - PR 75 marimeireles 'Microservices' (user: marimeireles) 2026-05-05 07:46:21,217 [ scc.merge] INFO Updating cda3ec6..c8a0015 2026-05-05 07:46:21,217 [ scc.merge] INFO Previously merged: 2026-05-05 07:46:21,217 [ scc.merge] INFO - PR 84 joshmoore 'Remove use of OMERO_SERVER_PORT' 2026-05-05 07:46:21,217 [ scc.merge] INFO - PR 82 jburel 'Upgrade python' 2026-05-05 07:46:21,217 [ scc.merge] INFO - PR 81 erickmartins 'add ulimits to omero-server container' 2026-05-05 07:46:21,217 [ scc.merge] INFO 2026-05-05 07:46:21,217 [ scc.merge] INFO Merged PRs: 2026-05-05 07:46:21,217 [ scc.merge] INFO - PR 74 joshmoore 'Add 'ms' target for ./docker' 2026-05-05 07:46:21,217 [ scc.merge] INFO 2026-05-05 07:46:21,217 [ scc.merge] INFO Repository: ome/omero-upload 2026-05-05 07:46:21,217 [ scc.merge] INFO Already up to date. 2026-05-05 07:46:21,217 [ scc.merge] INFO 2026-05-05 07:46:21,217 [ scc.merge] INFO Merged PRs: 2026-05-05 07:46:21,217 [ scc.merge] INFO - PR 14 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-05 07:46:21,217 [ scc.merge] INFO 2026-05-05 07:46:21,217 [ scc.merge] INFO Repository: ome/omero-virtual-microscope 2026-05-05 07:46:21,217 [ scc.merge] INFO Updating deab817..160d894 2026-05-05 07:46:21,217 [ scc.merge] INFO Previously merged: 2026-05-05 07:46:21,217 [ scc.merge] INFO - PR 20 jburel 'Build' 2026-05-05 07:46:21,217 [ scc.merge] INFO 2026-05-05 07:46:21,217 [ scc.merge] INFO Merged PRs: 2026-05-05 07:46:21,217 [ scc.merge] INFO - PR 22 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-05 07:46:21,217 [ scc.merge] INFO 2026-05-05 07:46:21,217 [ scc.merge] INFO Repository: ome/omero-web-zarr 2026-05-05 07:46:21,217 [ scc.merge] INFO Excluded PRs: 2026-05-05 07:46:21,217 [ scc.merge] INFO - PR 16 will-moore 'Vizarr for s3 ngff' (stage: draft) 2026-05-05 07:46:21,217 [ scc.merge] INFO Updating 8f3c313..4e1e685 2026-05-05 07:46:21,217 [ scc.merge] INFO Previously merged: 2026-05-05 07:46:21,217 [ scc.merge] INFO - PR 23 lubianat 'Fix mix of .rst and .md on README' 2026-05-05 07:46:21,217 [ scc.merge] INFO - PR 20 will-moore 'Use zarr_format=2 for .zarray and chunk endpoints' 2026-05-05 07:46:21,217 [ scc.merge] INFO 2026-05-05 07:46:21,217 [ scc.merge] INFO Merged PRs: 2026-05-05 07:46:21,217 [ scc.merge] INFO - PR 21 will-moore 'Web zarr import' 2026-05-05 07:46:21,217 [ scc.merge] INFO 2026-05-05 07:46:21,218 [ scc.merge] INFO Conflicting PRs (not included): 2026-05-05 07:46:21,218 [ scc.merge] INFO - PR 10 will-moore 'Add Openwith -> itk-vtk viewer' 2026-05-05 07:46:21,218 [ scc.merge] INFO 2026-05-05 07:46:21,218 [ scc.merge] INFO Repository: openmicroscopy/omero-weberror 2026-05-05 07:46:21,218 [ scc.merge] INFO Already up to date. 2026-05-05 07:46:21,218 [ scc.merge] INFO 2026-05-05 07:46:21,218 [ scc.merge] INFO Merged PRs: 2026-05-05 07:46:21,218 [ scc.merge] INFO - PR 25 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-05 07:46:21,218 [ scc.merge] INFO 2026-05-05 07:46:21,218 [ scc.merge] INFO Repository: openmicroscopy/omero-webtest 2026-05-05 07:46:21,218 [ scc.merge] INFO Already up to date. 2026-05-05 07:46:21,218 [ scc.merge] INFO 2026-05-05 07:46:21,218 [ scc.merge] INFO Merged PRs: 2026-05-05 07:46:21,218 [ scc.merge] INFO - PR 37 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.13.0 in /.github/workflows' 2026-05-05 07:46:21,218 [ scc.merge] INFO 2026-05-05 07:46:21,218 [ scc.merge] INFO Repository: ome/rOMERO-gateway 2026-05-05 07:46:21,218 [ scc.merge] INFO Already up to date. 2026-05-05 07:46:21,218 [ scc.merge] INFO 2026-05-05 07:46:21,218 [ scc.merge] INFO 2026-05-05 07:46:21,218 [ scc.merge] INFO Repository: ome/scripts 2026-05-05 07:46:21,218 [ scc.merge] INFO Updating 4b4c755..5b4d768 2026-05-05 07:46:21,218 [ scc.merge] INFO Previously merged: 2026-05-05 07:46:21,218 [ scc.merge] INFO - PR 231 jburel 'Create Release ' 2026-05-05 07:46:21,218 [ scc.merge] INFO - PR 229 Rdornier 'Adding support for custom user label' 2026-05-05 07:46:21,218 [ scc.merge] INFO - PR 223 will-moore 'don't attempt ROI stats on big images' 2026-05-05 07:46:21,218 [ scc.merge] INFO - PR 230 Rdornier 'Import from csv fix' 2026-05-05 07:46:21,218 [ scc.merge] INFO - PR 228 dependabot[bot] 'Bump pypa/gh-action-pypi-publish from 1.3.0 to 1.13.0 in /.github/workflows' 2026-05-05 07:46:21,218 [ scc.merge] INFO - PR 227 jburel 'Replace tostring by tobytes' 2026-05-05 07:46:21,218 [ scc.merge] INFO - PR 225 will-moore 'Fix param names and assertion texts in tests' 2026-05-05 07:46:21,218 [ scc.merge] INFO 2026-05-05 07:46:21,218 [ scc.merge] INFO 2026-05-05 07:46:21,218 [ scc.merge] DEBUG Cleaning remote branches created for merging 2026-05-05 07:46:21,218 [ scc.git] DEBUG Calling 'git remote' 2026-05-05 07:46:21,220 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/minimal-omero-client 2026-05-05 07:46:21,221 [ scc.git] DEBUG Calling 'git remote' 2026-05-05 07:46:21,223 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:46:21,223 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-duplicate 2026-05-05 07:46:21,223 [ scc.git] DEBUG Calling 'git remote' 2026-05-05 07:46:21,225 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:46:21,225 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-render 2026-05-05 07:46:21,225 [ scc.git] DEBUG Calling 'git remote' 2026-05-05 07:46:21,227 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:46:21,227 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-cli-zarr 2026-05-05 07:46:21,227 [ scc.git] DEBUG Calling 'git remote' 2026-05-05 07:46:21,229 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:46:21,229 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-figure 2026-05-05 07:46:21,229 [ scc.git] DEBUG Calling 'git remote' 2026-05-05 07:46:21,231 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:46:21,231 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-fpbioimage 2026-05-05 07:46:21,232 [ scc.git] DEBUG Calling 'git remote' 2026-05-05 07:46:21,234 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:46:21,234 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-gallery 2026-05-05 07:46:21,234 [ scc.git] DEBUG Calling 'git remote' 2026-05-05 07:46:21,236 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:46:21,236 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-iviewer 2026-05-05 07:46:21,236 [ scc.git] DEBUG Calling 'git remote' 2026-05-05 07:46:21,238 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:46:21,238 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-mapr 2026-05-05 07:46:21,238 [ scc.git] DEBUG Calling 'git remote' 2026-05-05 07:46:21,240 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:46:21,240 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-metadata 2026-05-05 07:46:21,240 [ scc.git] DEBUG Calling 'git remote' 2026-05-05 07:46:21,242 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:46:21,242 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-parade 2026-05-05 07:46:21,242 [ scc.git] DEBUG Calling 'git remote' 2026-05-05 07:46:21,244 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:46:21,244 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-prometheus-tools 2026-05-05 07:46:21,244 [ scc.git] DEBUG Calling 'git remote' 2026-05-05 07:46:21,246 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:46:21,246 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-rois 2026-05-05 07:46:21,246 [ scc.git] DEBUG Calling 'git remote' 2026-05-05 07:46:21,248 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:46:21,248 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-signup 2026-05-05 07:46:21,249 [ scc.git] DEBUG Calling 'git remote' 2026-05-05 07:46:21,251 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:46:21,251 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-test-infra 2026-05-05 07:46:21,251 [ scc.git] DEBUG Calling 'git remote' 2026-05-05 07:46:21,253 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:46:21,253 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-upload 2026-05-05 07:46:21,253 [ scc.git] DEBUG Calling 'git remote' 2026-05-05 07:46:21,255 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:46:21,255 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-virtual-microscope 2026-05-05 07:46:21,255 [ scc.git] DEBUG Calling 'git remote' 2026-05-05 07:46:21,257 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:46:21,257 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-web-zarr 2026-05-05 07:46:21,257 [ scc.git] DEBUG Calling 'git remote' 2026-05-05 07:46:21,259 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:46:21,259 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-weberror 2026-05-05 07:46:21,259 [ scc.git] DEBUG Calling 'git remote' 2026-05-05 07:46:21,261 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:46:21,261 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/omero-webtest 2026-05-05 07:46:21,261 [ scc.git] DEBUG Calling 'git remote' 2026-05-05 07:46:21,263 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:46:21,263 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/rOMERO-gateway 2026-05-05 07:46:21,263 [ scc.git] DEBUG Calling 'git remote' 2026-05-05 07:46:21,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push 2026-05-05 07:46:21,265 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push/scripts 2026-05-05 07:46:21,265 [ scc.git] DEBUG Calling 'git remote' 2026-05-05 07:46:21,267 [ scc.git] DEBUG cd /home/omero/workspace/OMERO-plugins-push Update component versions python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/minimal-omero-client/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/installer.py:27: SetuptoolsDeprecationWarning: setuptools.installer is deprecated. Requirements should be satisfied by a PEP 517 installer. warnings.warn( WARNING: The wheel package is not available. WARNING: The wheel package is not available. /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '8.0.1.rc2' to '8.0.1rc2' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '8.0.1.rc2' to '8.0.1rc2' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:530: UserWarning: Normalizing '0.4.2dev0' to '0.4.2.dev0' warnings.warn(tmpl.format(**locals())) /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-iviewer/setup.py': [Errno 2] No such file or directory /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/omero-test-infra/setup.py': [Errno 2] No such file or directory WARNING: '' not a valid package name; please use only .-separated package names in setup.py WARNING: '' not a valid package name; please use only .-separated package names in setup.py /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( /home/omero/workspace/OMERO-plugins-push/build/venv/lib64/python3.11/site-packages/setuptools/dist.py:771: UserWarning: Usage of dash-separated 'description-file' will not be supported in future versions. Please use the underscore name 'description_file' instead warnings.warn( python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory python3.11: can't open file '/home/omero/workspace/OMERO-plugins-push/rOMERO-gateway/setup.py': [Errno 2] No such file or directory Updating omero-gateway from 5.10.0 to 5.10.6-SNAPSHOT grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: grep: build.gradle: No such file or directory Up-to-date: Up-to-date: Up-to-date: Up-to-date: Up-to-date: Commit all component version changes Entering 'minimal-omero-client' Entering 'omero-cli-duplicate' Entering 'omero-cli-render' Entering 'omero-cli-zarr' Entering 'omero-figure' Entering 'omero-fpbioimage' Entering 'omero-gallery' Entering 'omero-iviewer' Entering 'omero-mapr' Entering 'omero-metadata' Entering 'omero-parade' Entering 'omero-prometheus-tools' Entering 'omero-rois' Entering 'omero-signup' Entering 'omero-test-infra' Entering 'omero-upload' Entering 'omero-virtual-microscope' Entering 'omero-web-zarr' Entering 'omero-weberror' Entering 'omero-webtest' Entering 'rOMERO-gateway' Entering 'scripts' Entering 'minimal-omero-client' [detached HEAD 72e8486] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Entering 'omero-cli-duplicate' HEAD detached from 4777ef8 nothing to commit, working tree clean Entering 'omero-cli-render' HEAD detached from ce6e13c nothing to commit, working tree clean Entering 'omero-cli-zarr' HEAD detached from 11d3587 Untracked files: (use "git add <file>..." to include in what will be committed) .eggs/ nothing added to commit but untracked files present (use "git add" to track) Entering 'omero-figure' HEAD detached from 9cc36cde nothing to commit, working tree clean Entering 'omero-fpbioimage' HEAD detached from 3b6c05a nothing to commit, working tree clean Entering 'omero-gallery' HEAD detached from 2a621da nothing to commit, working tree clean Entering 'omero-iviewer' HEAD detached from 7a798ce nothing to commit, working tree clean Entering 'omero-mapr' HEAD detached from 0a557da nothing to commit, working tree clean Entering 'omero-metadata' HEAD detached from 3cd120c nothing to commit, working tree clean Entering 'omero-parade' HEAD detached from fb5ae86 nothing to commit, working tree clean Entering 'omero-prometheus-tools' HEAD detached from eb47378 nothing to commit, working tree clean Entering 'omero-rois' HEAD detached from bdfeb5e nothing to commit, working tree clean Entering 'omero-signup' HEAD detached from be76813 nothing to commit, working tree clean Entering 'omero-test-infra' HEAD detached from cda3ec6 nothing to commit, working tree clean Entering 'omero-upload' HEAD detached from 100f6ae nothing to commit, working tree clean Entering 'omero-virtual-microscope' HEAD detached from deab817 nothing to commit, working tree clean Entering 'omero-web-zarr' HEAD detached from 8f3c313 nothing to commit, working tree clean Entering 'omero-weberror' HEAD detached from 70b01ed nothing to commit, working tree clean Entering 'omero-webtest' HEAD detached from 5bfef29 nothing to commit, working tree clean Entering 'rOMERO-gateway' HEAD detached from 7b5d64d nothing to commit, working tree clean Entering 'scripts' HEAD detached from 4b4c755 nothing to commit, working tree clean [detached HEAD 147bede] Update component versions 1 file changed, 1 insertion(+), 1 deletion(-) Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 2026-05-05 07:47:10,816 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-test-infra to /repositories/111908919 Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 2026-05-05 07:47:20,978 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-weberror to /repositories/38373425 Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 2026-05-05 07:47:23,659 [github.Reque] INFO Following Github server redirection from /repos/openmicroscopy/omero-webtest to /repositories/25970383 Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-05-05 07:47:28,837 [github.Reque] INFO Following Github server redirection from /repos/ome/scripts to /repositories/4865545 2026-05-05 07:48:17,568 [ scc.push] INFO Merged branch pushed to https://github.com/snoopycrimecop/omero-plugins/tree/merge_ci [Pipeline] archiveArtifacts Archiving artifacts [Pipeline] } [Pipeline] // node [Pipeline] End of Pipeline Finished: SUCCESS